View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16117_low_16 (Length: 259)
Name: NF16117_low_16
Description: NF16117
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16117_low_16 |
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Alignment Details
Target: chr1 (Bit Score: 232; Significance: 1e-128; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 18 - 249
Target Start/End: Original strand, 43432411 - 43432642
Alignment:
| Q |
18 |
ctttgttccataccttctttcgtcttcatcaaattgatcattggttgcaggtggggttagaaataggaattaattgggccccaatgtaggccctcaaaaa |
117 |
Q |
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| T |
43432411 |
ctttgttccataccttctttcgtcttcatcaaattgatcattggttgcaggtggggttagaaataggaattaattgggccccaatgtaggccctcaaaaa |
43432510 |
T |
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| Q |
118 |
gttcacaagtgggaccaaaacaatcatgaattctatatattttatacatttcatcttcttaaaataaacaaaggatgtaatggaaacaaaataagaaaca |
217 |
Q |
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| T |
43432511 |
gttcacaagtgggaccaaaacaatcatgaattctatatattttatacatttcatcttcttaaaataaacaaaggatgtaatggaaacaaaataagaaaca |
43432610 |
T |
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| Q |
218 |
ttgattctagaatgaactatccgtaccctttg |
249 |
Q |
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| T |
43432611 |
ttgattctagaatgaactatccgtaccctttg |
43432642 |
T |
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