View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1611_low_39 (Length: 250)

Name: NF1611_low_39
Description: NF1611
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1611_low_39
NF1611_low_39
[»] chr6 (32 HSPs)
chr6 (1-237)||(7972582-7972815)
chr6 (9-200)||(21527311-21527502)
chr6 (9-235)||(8049091-8049318)
chr6 (8-235)||(25056400-25056640)
chr6 (9-200)||(9095755-9095947)
chr6 (23-239)||(4665804-4666027)
chr6 (9-232)||(2437784-2438014)
chr6 (60-240)||(23410446-23410626)
chr6 (23-234)||(4184615-4184818)
chr6 (55-200)||(6111110-6111255)
chr6 (8-121)||(26252683-26252796)
chr6 (100-221)||(34889064-34889189)
chr6 (186-240)||(9095689-9095743)
chr6 (186-240)||(21527245-21527299)
chr6 (73-197)||(14093775-14093900)
chr6 (130-192)||(26252586-26252648)
chr6 (7-66)||(7833442-7833501)
chr6 (174-239)||(6111047-6111113)
chr6 (174-239)||(8460935-8461001)
chr6 (55-185)||(31660455-31660580)
chr6 (94-177)||(4122778-4122861)
chr6 (20-66)||(14094280-14094326)
chr6 (194-235)||(9353192-9353233)
chr6 (182-235)||(14093714-14093766)
chr6 (117-163)||(9353140-9353186)
chr6 (73-152)||(6396639-6396720)
chr6 (9-70)||(17193138-17193199)
chr6 (9-42)||(21526905-21526938)
chr6 (9-41)||(8049963-8049995)
chr6 (141-173)||(8460870-8460902)
chr6 (7-35)||(23777274-23777302)
chr6 (6-70)||(27313477-27313541)
[»] chr7 (55 HSPs)
chr7 (12-240)||(4962875-4963110)
chr7 (9-232)||(35793061-35793287)
chr7 (9-235)||(4567226-4567451)
chr7 (17-237)||(25290538-25290765)
chr7 (24-200)||(39430587-39430763)
chr7 (9-200)||(15643245-15643437)
chr7 (9-235)||(10534959-10535185)
chr7 (16-235)||(37124091-37124312)
chr7 (3-235)||(8614780-8615007)
chr7 (10-234)||(14771361-14771585)
chr7 (10-234)||(15221813-15222037)
chr7 (9-200)||(24394211-24394401)
chr7 (9-200)||(3835651-3835840)
chr7 (55-192)||(2798562-2798698)
chr7 (9-217)||(28226458-28226667)
chr7 (9-217)||(36412806-36413012)
chr7 (12-197)||(27723203-27723388)
chr7 (9-203)||(2273495-2273690)
chr7 (94-232)||(16196781-16196919)
chr7 (7-185)||(46672039-46672209)
chr7 (9-180)||(39617447-39617621)
chr7 (54-217)||(39599661-39599822)
chr7 (128-196)||(4678432-4678500)
chr7 (111-177)||(39432604-39432670)
chr7 (182-235)||(3835594-3835647)
chr7 (72-200)||(7809181-7809309)
chr7 (16-151)||(39247325-39247460)
chr7 (134-225)||(2271863-2271953)
chr7 (186-239)||(15643449-15643502)
chr7 (54-180)||(44549986-44550112)
chr7 (186-234)||(12394239-12394287)
chr7 (60-192)||(41747201-41747331)
chr7 (134-200)||(27229608-27229675)
chr7 (186-237)||(46671959-46672010)
chr7 (14-84)||(38707223-38707292)
chr7 (99-177)||(43368785-43368863)
chr7 (3-43)||(2271318-2271358)
chr7 (6-180)||(12394023-12394204)
chr7 (54-148)||(27229804-27229899)
chr7 (186-233)||(27723404-27723450)
chr7 (130-180)||(39427432-39427483)
chr7 (111-174)||(10026226-10026291)
chr7 (8-49)||(39426216-39426257)
chr7 (186-225)||(24394160-24394199)
chr7 (26-73)||(39430784-39430831)
chr7 (202-233)||(39617624-39617655)
chr7 (186-240)||(39430522-39430575)
chr7 (1-42)||(10534401-10534442)
chr7 (9-42)||(16197453-16197486)
chr7 (9-42)||(25291075-25291108)
chr7 (9-42)||(39434553-39434586)
chr7 (202-239)||(42509712-42509749)
chr7 (9-42)||(46671618-46671651)
chr7 (20-151)||(1719906-1720038)
chr7 (7-35)||(31430537-31430565)
[»] chr5 (57 HSPs)
chr5 (9-240)||(32717923-32718157)
chr5 (9-239)||(16365643-16365875)
chr5 (20-224)||(12436695-12436897)
chr5 (1-235)||(1583362-1583597)
chr5 (9-235)||(17201140-17201377)
chr5 (9-146)||(17557868-17558005)
chr5 (9-235)||(18413316-18413527)
chr5 (9-235)||(8544685-8544906)
chr5 (63-224)||(19931802-19931962)
chr5 (72-224)||(19924863-19925013)
chr5 (62-239)||(39614797-39614980)
chr5 (16-200)||(14654862-14655030)
chr5 (9-180)||(17202832-17203002)
chr5 (12-234)||(36437297-36437515)
chr5 (9-235)||(43346622-43346857)
chr5 (15-203)||(11992195-11992387)
chr5 (9-200)||(20201544-20201739)
chr5 (111-224)||(19922151-19922263)
chr5 (9-142)||(28619899-28620034)
chr5 (51-203)||(32474131-32474282)
chr5 (2-130)||(36060245-36060373)
chr5 (13-235)||(42674027-42674260)
chr5 (9-121)||(249631-249743)
chr5 (137-235)||(6428276-6428375)
chr5 (15-147)||(19803578-19803708)
chr5 (111-180)||(1590163-1590232)
chr5 (9-121)||(37269360-37269472)
chr5 (179-238)||(20201743-20201803)
chr5 (80-199)||(36246269-36246389)
chr5 (9-106)||(11825533-11825630)
chr5 (176-233)||(17202341-17202398)
chr5 (94-181)||(39940311-39940399)
chr5 (182-235)||(249470-249520)
chr5 (130-177)||(249549-249596)
chr5 (130-221)||(6434031-6434122)
chr5 (60-172)||(31889466-31889580)
chr5 (136-190)||(37269522-37269576)
chr5 (194-235)||(32474294-32474335)
chr5 (172-224)||(19133422-19133476)
chr5 (86-180)||(17591635-17591728)
chr5 (9-42)||(28620647-28620680)
chr5 (60-162)||(39585777-39585881)
chr5 (186-230)||(11992144-11992188)
chr5 (186-226)||(14655042-14655082)
chr5 (133-199)||(18552493-18552560)
chr5 (5-35)||(4175711-4175741)
chr5 (59-109)||(10704409-10704459)
chr5 (154-200)||(36060204-36060249)
chr5 (186-224)||(37269588-37269626)
chr5 (68-178)||(39584793-39584903)
chr5 (7-40)||(19831766-19831799)
chr5 (8-36)||(9127581-9127609)
chr5 (130-170)||(11825447-11825487)
chr5 (211-239)||(14967649-14967677)
chr5 (9-41)||(20202288-20202320)
chr5 (101-185)||(36194021-36194105)
chr5 (14-42)||(39585343-39585371)
[»] scaffold1130 (2 HSPs)
scaffold1130 (5-240)||(293-525)
scaffold1130 (9-41)||(834-866)
[»] chr1 (47 HSPs)
chr1 (9-240)||(1674708-1674944)
chr1 (4-233)||(6295699-6295930)
chr1 (9-200)||(11238231-11238422)
chr1 (20-225)||(2655638-2655844)
chr1 (18-235)||(39386615-39386831)
chr1 (11-225)||(36319926-36320143)
chr1 (18-193)||(788278-788451)
chr1 (9-235)||(13254709-13254938)
chr1 (5-239)||(31623045-31623292)
chr1 (9-121)||(52414825-52414937)
chr1 (9-208)||(3900933-3901130)
chr1 (9-208)||(50488740-50488937)
chr1 (130-235)||(52414972-52415078)
chr1 (14-239)||(4396001-4396226)
chr1 (130-225)||(32769027-32769124)
chr1 (130-225)||(4671450-4671546)
chr1 (9-173)||(43021044-43021208)
chr1 (99-195)||(10430513-10430609)
chr1 (9-192)||(40519193-40519385)
chr1 (90-239)||(37710407-37710560)
chr1 (186-240)||(788204-788258)
chr1 (130-192)||(23699422-23699484)
chr1 (12-121)||(30279925-30280034)
chr1 (9-121)||(32768881-32768992)
chr1 (15-121)||(23699519-23699626)
chr1 (94-185)||(10101672-10101762)
chr1 (111-158)||(21535845-21535892)
chr1 (81-151)||(23698747-23698817)
chr1 (186-235)||(23699352-23699401)
chr1 (80-192)||(52281700-52281813)
chr1 (132-180)||(39157128-39157176)
chr1 (130-200)||(19269741-19269812)
chr1 (179-234)||(23697658-23697716)
chr1 (198-239)||(1394787-1394828)
chr1 (9-66)||(4671313-4671370)
chr1 (60-152)||(23697783-23697876)
chr1 (136-192)||(30280075-30280130)
chr1 (182-240)||(11238167-11238224)
chr1 (54-180)||(21967163-21967289)
chr1 (186-239)||(19269825-19269878)
chr1 (5-40)||(9361949-9361984)
chr1 (158-235)||(11795765-11795848)
chr1 (5-40)||(51974397-51974432)
chr1 (9-66)||(15660567-15660624)
chr1 (131-196)||(32186544-32186609)
chr1 (5-42)||(32769596-32769633)
chr1 (7-35)||(28678999-28679027)
[»] chr8 (53 HSPs)
chr8 (9-234)||(25496561-25496788)
chr8 (9-231)||(32233540-32233764)
chr8 (9-200)||(3443711-3443902)
chr8 (13-237)||(9455149-9455378)
chr8 (9-234)||(25400382-25400608)
chr8 (51-200)||(7578188-7578338)
chr8 (9-188)||(34146095-34146274)
chr8 (73-231)||(1530546-1530703)
chr8 (9-192)||(2742927-2743094)
chr8 (32-224)||(27231709-27231905)
chr8 (9-185)||(4418482-4418657)
chr8 (9-233)||(16393632-16393842)
chr8 (9-239)||(34038819-34039034)
chr8 (130-235)||(29315816-29315922)
chr8 (9-200)||(1358897-1359082)
chr8 (53-200)||(16599358-16599506)
chr8 (9-217)||(41411430-41411636)
chr8 (15-185)||(14896547-14896717)
chr8 (9-121)||(29315957-29316069)
chr8 (9-208)||(40557123-40557319)
chr8 (20-214)||(38401487-38401684)
chr8 (110-239)||(4418831-4418957)
chr8 (36-152)||(30887895-30888010)
chr8 (86-224)||(39628238-39628386)
chr8 (86-224)||(39637788-39637936)
chr8 (183-239)||(1358834-1358890)
chr8 (186-240)||(3443645-3443699)
chr8 (111-177)||(5870769-5870835)
chr8 (115-180)||(38457289-38457354)
chr8 (73-173)||(7695303-7695403)
chr8 (180-235)||(3741741-3741796)
chr8 (89-224)||(1256683-1256821)
chr8 (23-117)||(3741536-3741629)
chr8 (130-192)||(3741668-3741730)
chr8 (130-192)||(36682591-36682652)
chr8 (182-234)||(11087218-11087270)
chr8 (58-168)||(43026703-43026814)
chr8 (193-235)||(7695216-7695258)
chr8 (182-235)||(38457384-38457437)
chr8 (73-185)||(45083023-45083135)
chr8 (182-239)||(16599283-16599341)
chr8 (6-66)||(43553446-43553506)
chr8 (56-152)||(44666214-44666310)
chr8 (182-229)||(11384707-11384754)
chr8 (8-42)||(32234291-32234325)
chr8 (186-224)||(34146296-34146334)
chr8 (5-42)||(7695422-7695459)
chr8 (9-42)||(27232276-27232309)
chr8 (9-66)||(39303719-39303776)
chr8 (190-218)||(7578144-7578172)
chr8 (9-37)||(11707713-11707741)
chr8 (3-35)||(14263518-14263550)
chr8 (194-230)||(30887808-30887844)
[»] chr4 (71 HSPs)
chr4 (9-235)||(9089564-9089791)
chr4 (20-225)||(45635409-45635615)
chr4 (6-177)||(38434244-38434416)
chr4 (9-235)||(50720811-50721039)
chr4 (8-231)||(54982705-54982932)
chr4 (9-233)||(38840364-38840593)
chr4 (8-200)||(46195657-46195849)
chr4 (13-200)||(24538291-24538477)
chr4 (73-229)||(37209934-37210097)
chr4 (9-200)||(19443555-19443745)
chr4 (9-169)||(38045323-38045484)
chr4 (9-185)||(45666211-45666387)
chr4 (9-166)||(24074131-24074288)
chr4 (81-192)||(37371399-37371509)
chr4 (117-235)||(2492863-2492983)
chr4 (18-156)||(6949013-6949150)
chr4 (9-108)||(17330740-17330839)
chr4 (9-200)||(49299850-49300037)
chr4 (78-230)||(34031954-34032105)
chr4 (9-121)||(33889488-33889599)
chr4 (130-225)||(33889634-33889729)
chr4 (72-213)||(20782443-20782584)
chr4 (9-234)||(49262924-49263129)
chr4 (9-146)||(21342249-21342380)
chr4 (54-179)||(23529471-23529597)
chr4 (130-218)||(667994-668083)
chr4 (9-121)||(668118-668230)
chr4 (111-235)||(25493839-25493973)
chr4 (130-233)||(47944408-47944511)
chr4 (59-185)||(21956479-21956605)
chr4 (74-180)||(25490439-25490545)
chr4 (182-230)||(19443501-19443549)
chr4 (182-233)||(1821520-1821571)
chr4 (179-240)||(24538225-24538287)
chr4 (182-233)||(49299792-49299843)
chr4 (5-80)||(53392558-53392632)
chr4 (129-235)||(53393381-53393487)
chr4 (186-235)||(37371330-37371379)
chr4 (182-234)||(6949219-6949271)
chr4 (179-239)||(53370318-53370378)
chr4 (14-97)||(1821657-1821740)
chr4 (3-42)||(19443026-19443065)
chr4 (130-189)||(41502571-41502630)
chr4 (182-233)||(45666413-45666464)
chr4 (194-233)||(46195866-46195905)
chr4 (130-200)||(1821574-1821644)
chr4 (186-240)||(55343853-55343907)
chr4 (186-239)||(30913637-30913690)
chr4 (172-225)||(41502632-41502685)
chr4 (54-157)||(46196822-46196926)
chr4 (194-237)||(8077929-8077972)
chr4 (110-168)||(33808886-33808944)
chr4 (194-235)||(24074084-24074125)
chr4 (9-42)||(37209530-37209563)
chr4 (5-42)||(49299302-49299339)
chr4 (130-200)||(53370405-53370477)
chr4 (194-238)||(30912718-30912762)
chr4 (101-177)||(30913537-30913612)
chr4 (7-66)||(53599990-53600049)
chr4 (130-180)||(29971530-29971580)
chr4 (111-197)||(38044911-38044996)
chr4 (206-236)||(38434170-38434200)
chr4 (111-210)||(46016561-46016662)
chr4 (7-36)||(18135284-18135313)
chr4 (9-66)||(38617511-38617568)
chr4 (131-168)||(42219055-42219092)
chr4 (7-36)||(49122494-49122523)
chr4 (117-185)||(2684696-2684763)
chr4 (9-41)||(33890207-33890239)
chr4 (9-41)||(37210119-37210151)
chr4 (9-105)||(41502441-41502536)
[»] chr3 (64 HSPs)
chr3 (9-200)||(25841918-25842109)
chr3 (12-233)||(45646513-45646738)
chr3 (3-235)||(20841225-20841454)
chr3 (9-228)||(34668592-34668812)
chr3 (7-234)||(5493461-5493693)
chr3 (9-167)||(21959700-21959857)
chr3 (24-233)||(2093701-2093920)
chr3 (9-180)||(45759957-45760128)
chr3 (9-235)||(37030921-37031141)
chr3 (51-239)||(15638431-15638618)
chr3 (9-200)||(27817328-27817518)
chr3 (9-240)||(7259631-7259864)
chr3 (9-217)||(54675151-54675356)
chr3 (14-200)||(9588660-9588847)
chr3 (9-168)||(19234007-19234166)
chr3 (16-188)||(296351-296524)
chr3 (130-225)||(44940825-44940921)
chr3 (55-205)||(19578288-19578440)
chr3 (9-186)||(27264025-27264200)
chr3 (51-239)||(375698-375889)
chr3 (127-239)||(23701887-23702003)
chr3 (52-236)||(2440602-2440781)
chr3 (127-239)||(23720342-23720459)
chr3 (127-239)||(23738798-23738915)
chr3 (117-239)||(23772183-23772312)
chr3 (9-235)||(16237538-16237747)
chr3 (86-162)||(1272413-1272489)
chr3 (132-239)||(3751492-3751607)
chr3 (12-235)||(38751037-38751268)
chr3 (60-180)||(19187669-19187789)
chr3 (99-203)||(23272054-23272157)
chr3 (130-193)||(21934474-21934537)
chr3 (25-211)||(25342350-25342537)
chr3 (111-220)||(45667468-45667578)
chr3 (132-222)||(15772305-15772393)
chr3 (54-156)||(1405182-1405284)
chr3 (9-90)||(21934603-21934684)
chr3 (21-121)||(44940956-44941055)
chr3 (110-177)||(633291-633358)
chr3 (186-240)||(21959648-21959702)
chr3 (182-235)||(2599144-2599197)
chr3 (88-177)||(29556509-29556598)
chr3 (99-203)||(20140992-20141095)
chr3 (186-240)||(25841852-25841906)
chr3 (5-42)||(2599660-2599697)
chr3 (194-239)||(6512506-6512551)
chr3 (194-239)||(9588864-9588909)
chr3 (5-42)||(16236972-16237009)
chr3 (186-234)||(296546-296594)
chr3 (9-105)||(2598991-2599087)
chr3 (130-215)||(25479620-25479709)
chr3 (25-105)||(45667398-45667478)
chr3 (187-238)||(6472675-6472726)
chr3 (182-236)||(42735556-42735610)
chr3 (188-231)||(12568520-12568563)
chr3 (188-231)||(13544984-13545027)
chr3 (94-180)||(38416356-38416447)
chr3 (197-239)||(6749087-6749129)
chr3 (54-152)||(10614555-10614653)
chr3 (187-229)||(45759879-45759921)
chr3 (9-42)||(7259285-7259318)
chr3 (6-35)||(48214044-48214073)
chr3 (205-237)||(29556466-29556498)
chr3 (9-37)||(46973400-46973428)
[»] chr2 (63 HSPs)
chr2 (9-200)||(27746379-27746570)
chr2 (9-200)||(150264-150455)
chr2 (13-229)||(21252495-21252714)
chr2 (9-235)||(16806503-16806728)
chr2 (9-235)||(16845784-16846009)
chr2 (10-200)||(4959369-4959558)
chr2 (9-200)||(25965860-25966051)
chr2 (9-239)||(15507363-15507597)
chr2 (9-235)||(38589249-38589479)
chr2 (72-239)||(44898085-44898256)
chr2 (14-230)||(20171395-20171612)
chr2 (20-192)||(34424771-34424943)
chr2 (9-239)||(41540956-41541192)
chr2 (7-200)||(11073940-11074135)
chr2 (38-189)||(42756731-42756882)
chr2 (81-239)||(33659686-33659846)
chr2 (9-200)||(1397366-1397557)
chr2 (9-192)||(20891301-20891479)
chr2 (60-235)||(45273364-45273542)
chr2 (9-180)||(3309845-3310015)
chr2 (54-197)||(4700951-4701094)
chr2 (9-200)||(11083814-11084004)
chr2 (14-192)||(36244031-36244209)
chr2 (73-217)||(1770148-1770293)
chr2 (130-239)||(408436-408545)
chr2 (73-233)||(13140843-13141002)
chr2 (60-168)||(32113373-32113482)
chr2 (68-200)||(158078-158210)
chr2 (55-239)||(4316654-4316855)
chr2 (127-200)||(7486303-7486376)
chr2 (179-236)||(25965802-25965860)
chr2 (186-240)||(27746582-27746636)
chr2 (175-233)||(29408720-29408778)
chr2 (73-170)||(33659532-33659630)
chr2 (186-240)||(34424697-34424751)
chr2 (69-206)||(2218173-2218312)
chr2 (116-177)||(12411667-12411728)
chr2 (116-177)||(12423727-12423788)
chr2 (59-191)||(29882161-29882294)
chr2 (53-185)||(37360292-37360425)
chr2 (194-240)||(4959303-4959349)
chr2 (186-240)||(12411765-12411819)
chr2 (186-240)||(12423825-12423879)
chr2 (73-187)||(13386399-13386512)
chr2 (186-239)||(158013-158066)
chr2 (182-235)||(11073881-11073934)
chr2 (60-168)||(41117387-41117496)
chr2 (111-192)||(29408784-29408867)
chr2 (186-233)||(1397567-1397614)
chr2 (179-229)||(7486249-7486300)
chr2 (20-66)||(5783567-5783613)
chr2 (9-66)||(29408896-29408953)
chr2 (194-239)||(42872207-42872252)
chr2 (51-167)||(42872273-42872389)
chr2 (116-192)||(37814534-37814610)
chr2 (186-218)||(42756905-42756937)
chr2 (5-35)||(32674187-32674217)
chr2 (147-185)||(33024255-33024293)
chr2 (182-235)||(150206-150258)
chr2 (59-163)||(6674513-6674622)
chr2 (139-180)||(31741919-31741960)
chr2 (8-36)||(11222552-11222580)
chr2 (4-40)||(31025172-31025208)
[»] scaffold0005 (3 HSPs)
scaffold0005 (35-235)||(256682-256881)
scaffold0005 (13-200)||(272361-272548)
scaffold0005 (186-225)||(272310-272349)
[»] scaffold0006 (1 HSPs)
scaffold0006 (111-240)||(46524-46650)
[»] scaffold0118 (3 HSPs)
scaffold0118 (9-185)||(14831-15006)
scaffold0118 (182-239)||(15178-15235)
scaffold0118 (112-192)||(15241-15317)
[»] scaffold0188 (1 HSPs)
scaffold0188 (57-177)||(6399-6519)
[»] scaffold1327 (1 HSPs)
scaffold1327 (9-185)||(784-959)
[»] scaffold0012 (1 HSPs)
scaffold0012 (8-84)||(202233-202309)
[»] scaffold1801 (1 HSPs)
scaffold1801 (139-235)||(1236-1333)
[»] scaffold0242 (2 HSPs)
scaffold0242 (130-235)||(14834-14941)
scaffold0242 (130-235)||(23669-23776)
[»] scaffold0159 (1 HSPs)
scaffold0159 (20-66)||(37030-37076)
[»] scaffold0014 (1 HSPs)
scaffold0014 (3-40)||(195968-196005)


Alignment Details
Target: chr6 (Bit Score: 207; Significance: 1e-113; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 7972815 - 7972582
Alignment:
Q  1 aaatatagtactccctccgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgatttatc 100  Q
    |||||||||||||||||||||||||||||||||||||   ||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  7972815 aaatatagtactccctccgttcctttttaagtgtctt---agggtgaatttttcgttcctatttaaatgttgttttgatattttgagggtatgatttatc 7972719  T
Q  101 aattatacactttgtcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagtttgttgttttaaacaaaatttgttt 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  7972718 aattatacactttgtcaattattctaatatttttcaataaaactaattaatgttatatatttgaaaaactaaagtttgtttttttaaacaaaatttgttt 7972619  T
Q  201 cttgttatcttcaaatttaaacaaaattttgttacct 237  Q
    |||||||||||||||||||||||||||||||||||||    
T  7972618 cttgttatcttcaaatttaaacaaaattttgttacct 7972582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 9 - 200
Target Start/End: Complemental strand, 21527502 - 21527311
Alignment:
Q  9 tactccctccgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattatac 108  Q
    ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| ||| ||||||||||||| |||||||||||| ||||||| ||    
T  21527502 tactccctccgttcctttttaagtgtctttttaggatgaatttttcgttcctatttaattgtcgttttggtattttaagggtatgatttgtcaattaaac 21527403  T
Q  109 actttgtcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagtttgttgttttaaacaaaatttgttt 200  Q
     ||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| ||||||||||| |||||||    
T  21527402 cctttgtcaattattctaatatttttcattaaaactaattaatgctttatatttgaaaaactaaagtttgtttttttaaacaaagtttgttt 21527311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 9 - 235
Target Start/End: Original strand, 8049091 - 8049318
Alignment:
Q  9 tactccctccgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattatac 108  Q
    ||||||||| ||||||||||||||||||||||||||||||| |||||||| ||||||| |||  ||||| |||||| | ||||||||||||||||| |||    
T  8049091 tactccctctgttcctttttaagtgtctttttagggtgaatttttcgttcttatttaattgtctttttgatattttaaaggtatgatttatcaattttac 8049190  T
Q  109 actttgtcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagtttgttgtt-ttaaacaaaatttgtttcttgtta 207  Q
     |||||||||||| ||| || ||||||||||||||||||||||| ||| |||||| |||||||||||||||| || ||||||||||||||||||||||||    
T  8049191 cctttgtcaattactcttatctttttcaataaaactaattaatgatatctatttggaaaactaaagtttgtttttcttaaacaaaatttgtttcttgtta 8049290  T
Q  208 tcttcaaatttaaacaaaattttgttac 235  Q
    |||||| |||| |||  |||||||||||    
T  8049291 tcttcacattttaacgtaattttgttac 8049318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 8 - 235
Target Start/End: Original strand, 25056400 - 25056640
Alignment:
Q  8 gtactccctccgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttg-gtattttgagggtatgatttatcaattat 106  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||  ||||  ||||||| |||||||||||| ||||| ||    
T  25056400 gtactccctccgttcctttttaagtgtctttttagggtgaatttttcgttcctatttaaaagtctttttctgtattttaagggtatgatttgtcaatcat 25056499  T
Q  107 acactttgtcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagttt------------gttgttttaaacaaaat 194  Q
    || |||||||||||| ||| || ||||||||||||||||||||||||||| |||||| |||||||||||||            ||| ||||||||||| |    
T  25056500 actctttgtcaattactcttatctttttcaataaaactaattaatgctatctatttggaaaactaaagttttttctaaacaaagtttttttaaacaaagt 25056599  T
Q  195 ttgtttcttgttatcttcaaatttaaacaaaattttgttac 235  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  25056600 ttgtttcttgttatcttcaaatttaaacaaaattttgttac 25056640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 9 - 200
Target Start/End: Complemental strand, 9095947 - 9095755
Alignment:
Q  9 tactccctccgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattatac 108  Q
    |||| |||| ||||||||||||  ||| ||||||||||||| |||||||| ||||||| ||| ||||| ||||||| |||||||||||| ||||||||||    
T  9095947 tacttcctctgttcctttttaaccgtcgttttagggtgaatttttcgttcttatttaactgtcgttttagtattttaagggtatgatttgtcaattatac 9095848  T
Q  109 actttgtcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagtttg-ttgttttaaacaaaatttgttt 200  Q
      ||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||| |||| || ||||||||||| |||||||    
T  9095847 catttgtcaattattcttatatttttcaataaaactaattaatgctatatatttggaaaactaaaatttgttttttttaaacaaagtttgttt 9095755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 23 - 239
Target Start/End: Original strand, 4665804 - 4666027
Alignment:
Q  23 ctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattatacactttgtcaattat 122  Q
    |||||||| |||||||||| |  |||| ||||||| |||||||| |||  ||||  |||||| ||  |||||||| ||||||||||  ||| |||||||     
T  4665804 ctttttaattgtctttttaagtcgaatttttcgtttctatttaactgtcattttaatattttaagcatatgatttgtcaattataccatttatcaattac 4665903  T
Q  123 tctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagtttg-ttgtttt------aaacaaaatttgtttcttgttatcttcaaa 215  Q
    ||| |||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||      |||||||||||||||||||||||||| |||    
T  4665904 tcttatatttttaaataaaactaattaatgctatatatttgaaaaactaaagtttgtttgttttgttttaaaacaaaatttgtttcttgttatctttaaa 4666003  T
Q  216 tttaaacaaaattttgttacctat 239  Q
    ||||||||||||||||||||||||    
T  4666004 tttaaacaaaattttgttacctat 4666027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 9 - 232
Target Start/End: Complemental strand, 2438014 - 2437784
Alignment:
Q  9 tactccctccgttcctttttaagtgtctttttagggtgaatatttc-gttcctatttaaatgttgttttggtattttgagggtatgatttatcaattata 107  Q
    ||||||||||||||||||||| |||||||| |||||||||| |||  |||| ||||||| |||  |||||| ||||| |||||||||||| |||||||||    
T  2438014 tactccctccgttcctttttaggtgtctttctagggtgaatttttttgttcttatttaactgtctttttggaattttaagggtatgatttgtcaattata 2437915  T
Q  108 cactttgtcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagtttgttgttttaaacaaaatttgtttc------ 201  Q
    | |||||||||||||||| || ||||||||||||||||||||||| ||| |||||| ||||||||| ||| || |||| |||||| ||||||||          
T  2437914 ccctttgtcaattattcttatttttttcaataaaactaattaatgatatctatttggaaaactaaatttttttttttttaacaaagtttgtttctcgcaa 2437815  T
Q  202 ttgttatcttcaaatttaaacaaaattttgt 232  Q
    | |||||||||| ||||||||||||||||||    
T  2437814 tcgttatcttcatatttaaacaaaattttgt 2437784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 60 - 240
Target Start/End: Original strand, 23410446 - 23410626
Alignment:
Q  60 tatttaaatgttgttttggtattttgagggtatgatttatcaattatacactttgtcaattattctaatatttttcaataaaactaattaatgctatata 159  Q
    ||||||||  || ||||| |||||| ||| || ||||| |||||||||| |||||  ||||| | | || ||||| ||||||||||||||||| ||||||    
T  23410446 tatttaaaaattattttgatattttaaggatacgatttgtcaattatactctttgcaaattacttttatcttttttaataaaactaattaatgttatata 23410545  T
Q  160 tttgaaaaactaaagtttgttgttttaaacaaaatttgtttcttgttatcttcaaatttaaacaaaattttgttacctatg 240  Q
    |||| | | ||||||||| || |||| |||||| |||||||||||||||||| ||||||||||||||||||||||||||||    
T  23410546 tttggatagctaaagttttttttttttaacaaagtttgtttcttgttatcttaaaatttaaacaaaattttgttacctatg 23410626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 23 - 234
Target Start/End: Original strand, 4184615 - 4184818
Alignment:
Q  23 ctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattatacactttgtcaattat 122  Q
    |||||||| |||||||||| |  |||| ||||||| |||||||| |||  ||||  |||||| ||  |||||||| |||||||| |  ||| |||||||     
T  4184615 ctttttaattgtctttttaagtcgaatttttcgtttctatttaactgtcattttaatattttaagcatatgatttgtcaattattctatttatcaattac 4184714  T
Q  123 tctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagtttgttgttttaaacaaaatttgtttcttgttatcttcaaatttaaac 222  Q
    ||| |||||||| ||||||| ||||||||||||||||||||      |    |||||  ||| |||||||||||||||||||||||||| ||||||||||    
T  4184715 tcttatatttttaaataaaattaattaatgctatatatttg------tttgttttgt--tttaaaacaaaatttgtttcttgttatctttaaatttaaac 4184806  T
Q  223 aaaattttgtta 234  Q
    ||||||||||||    
T  4184807 aaaattttgtta 4184818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 55 - 200
Target Start/End: Complemental strand, 6111255 - 6111110
Alignment:
Q  55 gttcctatttaaatgttgttttggtattttgagggtatgatttatcaattatacactttgtcaattattctaatatttttcaataaaactaattaatgct 154  Q
    |||| |||| || ||| ||||| ||||||| |  ||| ||||| ||| ||||||  ||| ||||||| ||| || ||||| ||||||||||||||||| |    
T  6111255 gttcatattcaactgtcgttttagtattttaatagtacgatttgtcagttataccatttatcaattactcttatctttttaaataaaactaattaatgtt 6111156  T
Q  155 atatatttgaaaaactaaagtttgttgttttaaacaaaatttgttt 200  Q
    ||||||||| |||||||||||||||| ||||||||||| |||||||    
T  6111155 atatatttggaaaactaaagtttgtttttttaaacaaagtttgttt 6111110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 8 - 121
Target Start/End: Complemental strand, 26252796 - 26252683
Alignment:
Q  8 gtactccctccgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattata 107  Q
    |||||||||||||| ||||||||||||| || |||||||||| ||| |||||||||||| ||| |||||| |||||| | |||| ||||| |||||||||    
T  26252796 gtactccctccgttactttttaagtgtcgttctagggtgaattttttgttcctatttaactgtcgttttgatattttaaaggtacgatttgtcaattata 26252697  T
Q  108 cactttgtcaatta 121  Q
    |  |||||||||||    
T  26252696 ccatttgtcaatta 26252683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 100 - 221
Target Start/End: Original strand, 34889064 - 34889189
Alignment:
Q  100 caattatacactttgtcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagtttgttgtt----ttaaacaaaatt 195  Q
    ||||||||| |||||| ||||| ||| || |||||||||||||||||||| || ||||||||||||||| ||||||||||| ||    | ||||||||||    
T  34889064 caattatactctttgttaattactcttatctttttcaataaaactaattattgttatatatttgaaaaattaaagtttgttttttctctgaaacaaaatt 34889163  T
Q  196 tgtttcttgttatcttcaaatttaaa 221  Q
    ||||| |||||||||| ||| |||||    
T  34889164 tgtttattgttatcttaaaagttaaa 34889189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 9095743 - 9095689
Alignment:
Q  186 aaacaaaatttgtttcttgttatcttcaaatttaaacaaaattttgttacctatg 240  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9095743 aaacaaaatttgtttcttgttatcttcaaatttaaacaaaattttgttacctatg 9095689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 21527299 - 21527245
Alignment:
Q  186 aaacaaaatttgtttcttgttatcttcaaatttaaacaaaattttgttacctatg 240  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21527299 aaacaaaatttgtttcttgttatcttcaaatttaaacaaaattttgttacctatg 21527245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 73 - 197
Target Start/End: Complemental strand, 14093900 - 14093775
Alignment:
Q  73 ttttggtattttgagggtatgatttatcaattatacactttgtcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaa 172  Q
    |||||||||||| | |||  ||||| |||||||||| |||||||||||| ||| || |||||||||||||||||||||||||||  ||||  ||||||||    
T  14093900 ttttggtattttaatggtccgatttgtcaattatactctttgtcaattactcttatctttttcaataaaactaattaatgctatcgattttgaaaactaa 14093801  T
Q  173 agttt-gttgttttaaacaaaatttg 197  Q
    |||||  || ||||||||||| ||||    
T  14093800 agtttattttttttaaacaaagtttg 14093775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 130 - 192
Target Start/End: Complemental strand, 26252648 - 26252586
Alignment:
Q  130 tttttcaataaaactaattaatgctatatatttgaaaaactaaagtttgttgttttaaacaaa 192  Q
    ||||| |||||||||||||||||||||||||||| |||| ||||||||||| |||||||||||    
T  26252648 ttttttaataaaactaattaatgctatatatttggaaaaataaagtttgtttttttaaacaaa 26252586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 7 - 66
Target Start/End: Original strand, 7833442 - 7833501
Alignment:
Q  7 agtactccctccgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaa 66  Q
    |||||||||||||||| ||||||||||||||||||| |||||| ||| ||||||||||||    
T  7833442 agtactccctccgttcttttttaagtgtctttttagagtgaattttttgttcctatttaa 7833501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 174 - 239
Target Start/End: Complemental strand, 6111113 - 6111047
Alignment:
Q  174 gtttgttgtttt-aaacaaaatttgtttcttgttatcttcaaatttaaacaaaattttgttacctat 239  Q
    ||||||| |||| ||||||| |||||||||||||||||||||| ||||| |||||||||||||||||    
T  6111113 gtttgtttttttgaaacaaagtttgtttcttgttatcttcaaacttaaataaaattttgttacctat 6111047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 174 - 239
Target Start/End: Original strand, 8460935 - 8461001
Alignment:
Q  174 gtttgttgttttaaa-caaaatttgtttcttgttatcttcaaatttaaacaaaattttgttacctat 239  Q
    ||||||| ||||||| |||| |||||||||||||||||| |||||||||||||| ||||||||||||    
T  8460935 gtttgtttttttaaaacaaagtttgtttcttgttatcttaaaatttaaacaaaactttgttacctat 8461001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 55 - 185
Target Start/End: Original strand, 31660455 - 31660580
Alignment:
Q  55 gttcctatttaaatgttgttttggtattttgagggtatgatttatcaattatacactttgtcaattattctaatatttttcaataaaactaattaatgct 154  Q
    |||| ||||||| |||| |||||||||||| |||||| |||||  || |||||| | || |||| | || |    |||||||||||||||||| ||||||    
T  31660455 gttcatatttaactgttattttggtattttaagggtacgatttgccacttataccccttctcaactcttat----tttttcaataaaactaat-aatgct 31660549  T
Q  155 atatatttgaaaaactaaagtttgttgtttt 185  Q
    || ||||||||||||||||||||||| ||||    
T  31660550 atctatttgaaaaactaaagtttgttatttt 31660580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 94 - 177
Target Start/End: Original strand, 4122778 - 4122861
Alignment:
Q  94 atttatcaattatacactttgtcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagttt 177  Q
    |||| ||| ||||||  ||| ||||||| ||| || ||||||||||||| ||||||||| ||| ||||||||||| ||||||||    
T  4122778 atttgtcacttataccatttctcaattactcttatctttttcaataaaattaattaatgttatctatttgaaaaagtaaagttt 4122861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 66
Target Start/End: Complemental strand, 14094326 - 14094280
Alignment:
Q  20 ttcctttttaagtgtctttttagggtgaatatttcgttcctatttaa 66  Q
    |||||||||||| || |||||||||||||| ||||||||||||||||    
T  14094326 ttcctttttaagagtttttttagggtgaatttttcgttcctatttaa 14094280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 194 - 235
Target Start/End: Original strand, 9353192 - 9353233
Alignment:
Q  194 tttgtttcttgttatcttcaaatttaaacaaaattttgttac 235  Q
    ||||||| |||||||||||||||||||| |||||||||||||    
T  9353192 tttgtttgttgttatcttcaaatttaaataaaattttgttac 9353233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 14093766 - 14093714
Alignment:
Q  182 ttttaaacaaaatttgtttcttgttatcttcaaatttaaacaaaattttgttac 235  Q
    ||||||||||  ||||||||||||||||||| || |||||||||||||||||||    
T  14093766 ttttaaacaacgtttgtttcttgttatcttctaa-ttaaacaaaattttgttac 14093714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 117 - 163
Target Start/End: Original strand, 9353140 - 9353186
Alignment:
Q  117 aattattctaatatttttcaataaaactaattaatgctatatatttg 163  Q
    ||||| ||| || ||||||||||||||||||||||||||| ||||||    
T  9353140 aattactcttatctttttcaataaaactaattaatgctatctatttg 9353186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 73 - 152
Target Start/End: Complemental strand, 6396720 - 6396639
Alignment:
Q  73 ttttggtattttga-gggtatgatttatcaattatacactttgtcaattattctaatattttt-caataaaactaattaatg 152  Q
    |||||||||||| | ||||| || || |||||||||| |||| | ||||||||| || ||||| ||||||||||||||||||    
T  6396720 ttttggtatttttaagggtaagagttgtcaattataccctttcttaattattcttatcttttttcaataaaactaattaatg 6396639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 17193138 - 17193199
Alignment:
Q  9 tactccctccgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgt 70  Q
    |||||||||||||||||||||||||||  ||| ||   ||| ||| ||||||||||||||||    
T  17193138 tactccctccgttcctttttaagtgtcacttttggagaaattttttgttcctatttaaatgt 17193199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 42
Target Start/End: Original strand, 21526905 - 21526938
Alignment:
Q  9 tactccctccgttcctttttaagtgtctttttag 42  Q
    ||||||||||||||||||||||||||| ||||||    
T  21526905 tactccctccgttcctttttaagtgtcgttttag 21526938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 41
Target Start/End: Complemental strand, 8049995 - 8049963
Alignment:
Q  9 tactccctccgttcctttttaagtgtcttttta 41  Q
    ||||||||||||||||||||| |||||||||||    
T  8049995 tactccctccgttcctttttatgtgtcttttta 8049963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 173
Target Start/End: Original strand, 8460870 - 8460902
Alignment:
Q  141 aactaattaatgctatatatttgaaaaactaaa 173  Q
    |||||||||||| ||||||||||||||||||||    
T  8460870 aactaattaatgatatatatttgaaaaactaaa 8460902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 35
Target Start/End: Original strand, 23777274 - 23777302
Alignment:
Q  7 agtactccctccgttcctttttaagtgtc 35  Q
    |||||||||||||||||||||||||||||    
T  23777274 agtactccctccgttcctttttaagtgtc 23777302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 70
Target Start/End: Original strand, 27313477 - 27313541
Alignment:
Q  6 tagtactccctccgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgt 70  Q
    ||||||||||||||||  ||||||||||||| ||| ||   ||| ||| ||||||||||||||||    
T  27313477 tagtactccctccgtttttttttaagtgtctcttttggagaaattttttgttcctatttaaatgt 27313541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 161; Significance: 6e-86; HSPs: 55)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 12 - 240
Target Start/End: Complemental strand, 4963110 - 4962875
Alignment:
Q  12 tccctccgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattatacact 111  Q
    |||||||||||||||||||||||| ||||||||||||| ||| |||||||||||| ||| ||||||||||||| |||||||||||||||||||||||  |    
T  4963110 tccctccgttcctttttaagtgtcgttttagggtgaattttttgttcctatttaactgtcgttttggtattttaagggtatgatttatcaattatacctt 4963011  T
Q  112 ttgtcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagtttg-ttgtttt------aaacaaaatttgtttcttg 204  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||      ||||||||||||||| |||    
T  4963010 ttgtcaattattcttatatttttcaataaaactaattagtgctatatatttgaaaaactaaagtttgtttgttttgttttaaaacaaaatttgtttattg 4962911  T
Q  205 ttatcttcaaatttaaacaaaattttgttacctatg 240  Q
    ||||||||||||||||||||||||||||||||||||    
T  4962910 ttatcttcaaatttaaacaaaattttgttacctatg 4962875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 9 - 232
Target Start/End: Complemental strand, 35793287 - 35793061
Alignment:
Q  9 tactccctccgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattatac 108  Q
    |||||||||||||| |||||||||||||||||||||||||| ||| | |||||||||| |||  |||||||||||| ||||| |||||| ||||||||||    
T  35793287 tactccctccgttcttttttaagtgtctttttagggtgaatttttagctcctatttaactgtctttttggtattttaagggtgtgatttgtcaattatac 35793188  T
Q  109 actttgtcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagtttgttgt---tttaaacaaaatttgtttcttgt 205  Q
     |||||||||||| ||| || ||||||||||||||||||||||| | | |||||| |||||||| |||| || |   || ||||||| ||||||||||||    
T  35793187 cctttgtcaattactcttatctttttcaataaaactaattaatgttgtctatttggaaaactaatgttttttttttcttaaaacaaagtttgtttcttgt 35793088  T
Q  206 tatcttcaaatttaaacaaaattttgt 232  Q
    |||||||||||||||||||||||||||    
T  35793087 tatcttcaaatttaaacaaaattttgt 35793061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 9 - 235
Target Start/End: Original strand, 4567226 - 4567451
Alignment:
Q  9 tactccctccgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattatac 108  Q
    ||||||||||||||||||||||||||||||||| ||||||| | ||||||||| |||| |||  |||||||||||| ||| || ||||| || |||||||    
T  4567226 tactccctccgttcctttttaagtgtctttttatggtgaatttgtcgttcctaattaactgtctttttggtattttaaggttacgatttgtcgattatac 4567325  T
Q  109 actttgtcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagtttgttgttttaaacaaaatttgtttcttgttat 208  Q
     ||||||||| || | | || ||||||||||||||||||||||||||| || ||| ||||||||||||| ||  |||||||||| |||||||||| ||||    
T  4567326 cctttgtcaactacttttatctttttcaataaaactaattaatgctatctagttggaaaactaaagttt-tttctttaaacaaagtttgtttcttcttat 4567424  T
Q  209 cttcaaatttaaacaaaattttgttac 235  Q
    |||||||||||||||||||||||||||    
T  4567425 cttcaaatttaaacaaaattttgttac 4567451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 17 - 237
Target Start/End: Original strand, 25290538 - 25290765
Alignment:
Q  17 ccgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattatacactttgtc 116  Q
    ||||| ||||||||||||||||||||||||||| || |||| |||||| | |||  || ||||||||| ||| ||||||||||||||||||   ||||||    
T  25290538 ccgtttctttttaagtgtctttttagggtgaattttccgtttctattttactgtcattatggtattttaaggttatgatttatcaattatatcttttgtc 25290637  T
Q  117 aattattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagtttg-ttgtttt------aaacaaaatttgtttcttgttatc 209  Q
    ||||||||| ||||||||||||||||||||||||||   ||||||||||||||||||||||| |||||||      |||||||||||||||| |||||||    
T  25290638 aattattcttatatttttcaataaaactaattaatgtcgtatatttgaaaaactaaagtttgtttgttttattttaaaacaaaatttgtttcctgttatc 25290737  T
Q  210 ttcaaatttaaacaaaattttgttacct 237  Q
     |||||||||||||||||||||||||||    
T  25290738 atcaaatttaaacaaaattttgttacct 25290765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 24 - 200
Target Start/End: Complemental strand, 39430763 - 39430587
Alignment:
Q  24 tttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattatacactttgtcaattatt 123  Q
    |||||||||||| ||||| ||||||| |||||||||||||||| |||  |||||||||||| |||||| |||||  ||||||||| ||||||||||||||    
T  39430763 tttttaagtgtcgttttaaggtgaatttttcgttcctatttaactgtcattttggtattttaagggtaagatttgacaattatactctttgtcaattatt 39430664  T
Q  124 ctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagtttgttgttttaaacaaaatttgttt 200  Q
    || ||||||||||||||||||||||| |||||||||||||||||||||||||||||| | ||||||||| |||||||    
T  39430663 cttatatttttcaataaaactaattagtgctatatatttgaaaaactaaagtttgttttattaaacaaagtttgttt 39430587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 9 - 200
Target Start/End: Original strand, 15643245 - 15643437
Alignment:
Q  9 tactccctccgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattatac 108  Q
    ||||||||||||| | |||||||||| |||||||| ||||| ||||||| |||||||| ||| ||||||||||||| |||||| ||||| ||||||||||    
T  15643245 tactccctccgtttccttttaagtgtttttttaggatgaatttttcgtttctatttaactgtcgttttggtattttaagggtacgatttctcaattatac 15643344  T
Q  109 actttgtcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagtttgtt-gttttaaacaaaatttgttt 200  Q
     |||| ||||||| ||| || |||||||||||||||||||||||||||||||||| ||||||||||||| ||  ||||||||||| |||||||    
T  15643345 cctttatcaattactcttatttttttcaataaaactaattaatgctatatatttggaaaactaaagttttttatttttaaacaaagtttgttt 15643437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 9 - 235
Target Start/End: Complemental strand, 10535185 - 10534959
Alignment:
Q  9 tactccctccgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattatac 108  Q
    |||||||| ||||| ||||||||||||||| || ||||| | |||||||||||||||| |||  |||||||||||| ||  ||  |||| ||||||||||    
T  10535185 tactcccttcgttcgtttttaagtgtctttatatggtgattttttcgttcctatttaactgtctttttggtattttaagaatacaatttgtcaattatac 10535086  T
Q  109 actttgtcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagtttgttgttttaaacaaaatttgtttcttgttat 208  Q
      ||||||||||  ||| || |||||||||||||||||||||||  || ||||||||||| |||||||| || ||| ||||| | |||||||||||||||    
T  10535085 cttttgtcaattcctcttatctttttcaataaaactaattaatgtaatctatttgaaaaattaaagttttttttttaaaacatagtttgtttcttgttat 10534986  T
Q  209 cttcaaatttaaacaaaattttgttac 235  Q
    |||||||||||| ||||||||||||||    
T  10534985 cttcaaatttaaccaaaattttgttac 10534959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 16 - 235
Target Start/End: Original strand, 37124091 - 37124312
Alignment:
Q  16 tccgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattatacactttgt 115  Q
    ||||||||||||||||||||||||||| |||||| |||||||||| ||||| | |  |||||||||||| ||||||  |||| |||||||||| ||||||    
T  37124091 tccgttcctttttaagtgtctttttagtgtgaatttttcgttcctttttaactttctttttggtattttaagggtacaatttgtcaattataccctttgt 37124190  T
Q  116 caattattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagtt-tgttgtttt-aaacaaaatttgtttcttgttatcttca 213  Q
     ||||| ||| || ||||||||||||||||||||||||| | |||||| |||||||||||| | || |||| |||||||| || ||||||||||||||||    
T  37124191 aaattactcttatctttttcaataaaactaattaatgctctctatttggaaaactaaagttgttttattttcaaacaaaaattatttcttgttatcttca 37124290  T
Q  214 aatttaaacaaaattttgttac 235  Q
     ||||||||  |||||||||||    
T  37124291 catttaaacttaattttgttac 37124312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 3 - 235
Target Start/End: Complemental strand, 8615007 - 8614780
Alignment:
Q  3 atatagtactccctccgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaa 102  Q
    ||||| |||||||| ||||||||||||||||| ||||||||  ||||   |||||| ||||||| |||  ||||||||||||  ||||| ||||| ||||    
T  8615007 atatactactcccttcgttcctttttaagtgtatttttaggaggaat---tcgttcatatttaagtgtc-ttttggtattttaggggtacgatttttcaa 8614912  T
Q  103 ttatacactttgtcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaa-gtttgttgttttaaacaaaatttgtttc 201  Q
    |||||| ||| |||||||| ||| || ||||| |||||||||||||| || ||| |||||||||||||||| |||| || ||| ||||||||||||||||    
T  8614911 ttataccctt-gtcaattactcttattttttt-aataaaactaattattgttatctatttgaaaaactaaatgttttttttttaaaacaaaatttgtttc 8614814  T
Q  202 ttgttatcttcaaatttaaacaaaattttgttac 235  Q
    ||||||||||||||||||||||||||||||||||    
T  8614813 ttgttatcttcaaatttaaacaaaattttgttac 8614780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 10 - 234
Target Start/End: Complemental strand, 14771585 - 14771361
Alignment:
Q  10 actccctccgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattataca 109  Q
    |||||||| |||| ||||||||||| |||||||||||||| |||||||||||||||| ||| ||||||||||||| |||||||||||| ||||||||||     
T  14771585 actccctctgttcttttttaagtgtttttttagggtgaatttttcgttcctatttaactgtcgttttggtattttaagggtatgatttgtcaattatacc 14771486  T
Q  110 ctttgtcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagtttgtt---gttttaaacaaaatttgtttcttgtt 206  Q
    |||||||||||||||| ||||||||||||| |||||   ||   | | | ||| || ||     |||||||    |||||||||||||||||||||||||    
T  14771485 ctttgtcaattattcttatatttttcaatataacta---aagtttgtttttttaaacaaagtttgtttgttttgtttttaaacaaaatttgtttcttgtt 14771389  T
Q  207 atcttcaaatttaaacaaaattttgtta 234  Q
    ||||||||||||||||||||||||||||    
T  14771388 atcttcaaatttaaacaaaattttgtta 14771361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 10 - 234
Target Start/End: Complemental strand, 15222037 - 15221813
Alignment:
Q  10 actccctccgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattataca 109  Q
    |||||||| |||| ||||||||||| |||||||||||||| |||||||||||||||| ||| ||||||||||||| |||||||||||| ||||||||||     
T  15222037 actccctctgttcttttttaagtgtttttttagggtgaatttttcgttcctatttaactgtcgttttggtattttaagggtatgatttgtcaattatacc 15221938  T
Q  110 ctttgtcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagtttgtt---gttttaaacaaaatttgtttcttgtt 206  Q
    |||||||||||||||| ||||||||||||| |||||   ||   | | | ||| || ||     |||||||    |||||||||||||||||||||||||    
T  15221937 ctttgtcaattattcttatatttttcaatataacta---aagtttgtttttttaaacaaagtttgtttgttttgtttttaaacaaaatttgtttcttgtt 15221841  T
Q  207 atcttcaaatttaaacaaaattttgtta 234  Q
    ||||||||||||||||||||||||||||    
T  15221840 atcttcaaatttaaacaaaattttgtta 15221813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 9 - 200
Target Start/End: Complemental strand, 24394401 - 24394211
Alignment:
Q  9 tactccctccgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattatac 108  Q
    ||||||||| |||||||||||||||| |||||||||||||  |||||||||||||||| | |  |||||||| ||| |||||| ||||||||||||||||    
T  24394401 tactccctcggttcctttttaagtgt-tttttagggtgaacttttcgttcctatttaactatcattttggtactttaagggtacgatttatcaattatac 24394303  T
Q  109 actttgtcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagtttgttgttttaaacaaaatttgttt 200  Q
     ||||||||| || ||| |||||||| ||||||||||| ||||| |||||||||| |||||||||||||||  ||||||||||| |||||||    
T  24394302 cctttgtcaactactcttatatttttgaataaaactaactaatgatatatatttggaaaactaaagtttgtatttttaaacaaagtttgttt 24394211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 9 - 200
Target Start/End: Complemental strand, 3835840 - 3835651
Alignment:
Q  9 tactccctccgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattatac 108  Q
    ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| |||  |||||||||||| |||||| ||||| ||||||||||    
T  3835840 tactccctccgttcctttttaagtgtctttttaggttgaat-tttcgttcctatttaactgtctttttggtattttaagggtacgatttgtcaattatac 3835742  T
Q  109 actttgtcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagtttg-ttgttttaaacaaaatttgttt 200  Q
     || ||||||| | ||| || |||||||||  |||||||||||  ||| |||||| |||||||||||||| || ||||||||||| |||||||    
T  3835741 cctctgtcaatcactcttatctttttcaat--aactaattaatattatctatttggaaaactaaagtttgttttttttaaacaaagtttgttt 3835651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 55 - 192
Target Start/End: Original strand, 2798562 - 2798698
Alignment:
Q  55 gttcctatttaaatgttgttttggtattttgagggtatgatttatcaattatacactttgtcaattattctaatatttttcaataaaactaattaatgct 154  Q
    ||||||||||||||||  |||| ||||||| |||||||||||| || ||||||| || ||||||||| ||| || |||||||||||||||||||||||||    
T  2798562 gttcctatttaaatgtcattttagtattttaagggtatgatttgtcgattatac-ctctgtcaattactcttatctttttcaataaaactaattaatgct 2798660  T
Q  155 atatatttgaaaaactaaagtttgttgttttaaacaaa 192  Q
    |||||||||||||||||||||||||  |||||||||||    
T  2798661 atatatttgaaaaactaaagtttgtatttttaaacaaa 2798698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 9 - 217
Target Start/End: Original strand, 28226458 - 28226667
Alignment:
Q  9 tactccctccgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattatac 108  Q
    ||||||||||||||||||||||| ||| ||| || | | || |   ||||||||||||  || ||||||||||| | |||||| | ||| ||||||||||    
T  28226458 tactccctccgttcctttttaagcgtcgtttgagtgcggatttagtgttcctatttaaccgtcgttttggtattataagggtacgctttgtcaattatac 28226557  T
Q  109 actttgtcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaag-tttgttgttttaaacaaaatttgtttcttgtta 207  Q
      ||||||||||  ||| || ||||||||||||||||||||||| ||||||||||||||||||||| ||| || |||| |||||| ||||||||||||||    
T  28226558 cttttgtcaattgctcttatctttttcaataaaactaattaatgttatatatttgaaaaactaaagtttttttatttttaacaaagtttgtttcttgtta 28226657  T
Q  208 tcttcaaatt 217  Q
    |||| |||||    
T  28226658 tcttaaaatt 28226667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 9 - 217
Target Start/End: Complemental strand, 36413012 - 36412806
Alignment:
Q  9 tactccctccgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattatac 108  Q
    ||||| ||||||||||||||||||||  ||| |  |||||| |  |||||||||||||  ||  ||||| |||||| ||||||  |||||||||||||||    
T  36413012 tactctctccgttcctttttaagtgtagtttgaatgtgaatttagcgttcctatttaaccgtcattttgatattttaagggtacaatttatcaattatac 36412913  T
Q  109 actttgtcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagtttgttgttttaaacaaaatttgtttcttgttat 208  Q
     ||||||  |||| ||| || |||||||| |||||||||||||| |||| ||||||||||||||||||| || ||| ||||||| |||||||||||||||    
T  36412912 cctttgtttattactcttatctttttcaa-aaaactaattaatgttataaatttgaaaaactaaagttt-ttttttaaaacaaagtttgtttcttgttat 36412815  T
Q  209 cttcaaatt 217  Q
    ||| |||||    
T  36412814 ctttaaatt 36412806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 12 - 197
Target Start/End: Original strand, 27723203 - 27723388
Alignment:
Q  12 tccctccgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattatacact 111  Q
    ||||||| ||| ||||||||||||||||||||| |||| ||| |||||||||||| | |  ||||| |||||| || ||| ||||| ||| |||||| ||    
T  27723203 tccctccattcatttttaagtgtctttttagggcgaattttttgttcctatttaactatctttttgatattttaagtgtacgatttgtcacttatactct 27723302  T
Q  112 ttgtcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagtttgttgttttaaacaaaatttg 197  Q
    |||| ||||| | | || ||||||| ||||||||||||||||||| | ||||||||| ||||||||||| | ||||||||| ||||    
T  27723303 ttgttaattacttttatctttttcagtaaaactaattaatgctatctgtttgaaaaattaaagtttgttttattaaacaaagtttg 27723388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 9 - 203
Target Start/End: Complemental strand, 2273690 - 2273495
Alignment:
Q  9 tactccctccgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttg-agggtatgatttatcaattata 107  Q
    ||||| ||||||||||||||||||||| ||| |  | | || | ||||| ||||||||  || |||||| ||||||  || |||  |||| |||||||||    
T  2273690 tactctctccgttcctttttaagtgtcatttgaatgcggatttatcgtttctatttaaccgtcgttttgatatttttcagagtacaatttgtcaattata 2273591  T
Q  108 cactttgtcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagtttgttgttttaaacaaaatttgtttctt 203  Q
    | |||||||||||| ||| || ||||||||||||||| |||||||||||||||||| |||||||||||||||| | | ||||||| ||||||||||    
T  2273590 cgctttgtcaattactcttatctttttcaataaaacttattaatgctatatatttggaaaactaaagtttgttttatgaaacaaagtttgtttctt 2273495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 94 - 232
Target Start/End: Original strand, 16196781 - 16196919
Alignment:
Q  94 atttatcaattatacactttgtcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagtttgttgtt-ttaaacaaa 192  Q
    |||| |||||||||| |||||||| ||| ||| || ||||||||||||||||||| ||| ||| || ||| |||||||||||||||| || |||||||||    
T  16196781 atttgtcaattataccctttgtca-ttactcttatctttttcaataaaactaattgatgttatctaattggaaaactaaagtttgtttttattaaacaaa 16196879  T
Q  193 atttgtttcttgttatcttcaaatttaaacaaaattttgt 232  Q
     ||||||||||||| |||||||||||||||||||||||||    
T  16196880 gtttgtttcttgttttcttcaaatttaaacaaaattttgt 16196919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 7 - 185
Target Start/End: Complemental strand, 46672209 - 46672039
Alignment:
Q  7 agtactccctccgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattat 106  Q
    |||||||  |||||||| ||||||||||| |||||| || ||| ||| |||||||||||| ||| ||| || |||||| |||||||||||| ||||||||    
T  46672209 agtactcattccgttcccttttaagtgtcattttagtgtaaattttttgttcctatttaattgtcgttctgatattttaagggtatgatttgtcaattat 46672110  T
Q  107 acactttgtcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagtttgttgtttt 185  Q
    || ||||||||||        ||||||| ||||||| |||||||| ||||||||||| | |||||||||||||| ||||    
T  46672109 accctttgtcaat--------tatttttaaataaaattaattaatactatatatttggagaactaaagtttgttttttt 46672039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 9 - 180
Target Start/End: Original strand, 39617447 - 39617621
Alignment:
Q  9 tactccctccgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaa-------atgttgttttggtattttgagggtatgatttatca 101  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||        | || |||| ||||||| |||||| ||||| |||    
T  39617447 tactccctccgttcctttttaagtgtctttttagggtgaattttttgttcctatttaactttttttttttttttttgtattttaagggtacgatttgtca 39617546  T
Q  102 attatacactttgtcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagtttgtt 180  Q
     ||||||  ||||||||||| | | || ||||||||||||| |||||||||     |||||| ||||||||||||||||    
T  39617547 gttataccttttgtcaattacttttatctttttcaataaaattaattaatg----ttatttggaaaactaaagtttgtt 39617621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 54 - 217
Target Start/End: Complemental strand, 39599822 - 39599661
Alignment:
Q  54 cgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattatacactttgtcaattattctaatattttt-caataaaactaattaatg 152  Q
    ||||||||||||  ||| || |||||||||| ||| ||  |||  |||||||||| |||| ||||||| ||| || ||||| | ||||||||||||||||    
T  39599822 cgttcctatttagctgtcgtgttggtattttaaggatacaattgttcaattataccctttatcaattactcttatcttttttcgataaaactaattaatg 39599723  T
Q  153 ctatatatttgaaaaactaaagtttgttgttttaaacaaaatttgtttcttgttatcttcaaatt 217  Q
    |||||||||||||||||||||||   || ||||||||||| ||||||| || ||||||| |||||    
T  39599722 ctatatatttgaaaaactaaagt---tttttttaaacaaagtttgtttgtttttatcttaaaatt 39599661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 128 - 196
Target Start/End: Original strand, 4678432 - 4678500
Alignment:
Q  128 tatttttcaataaaactaattaatgctatatatttgaaaaactaaagtttgttgttttaaacaaaattt 196  Q
    ||||||||||||||||||||||||| |||||||||| ||||||||||| |||| |||||||||||||||    
T  4678432 tatttttcaataaaactaattaatgttatatatttggaaaactaaagtatgtttttttaaacaaaattt 4678500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 111 - 177
Target Start/End: Original strand, 39432604 - 39432670
Alignment:
Q  111 tttgtcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagttt 177  Q
    ||||||||||||| | |||||||||||||||||| |||| |||||||||||||||||||||||||||    
T  39432604 tttgtcaattatttttatatttttcaataaaacttattagtgctatatatttgaaaaactaaagttt 39432670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 3835647 - 3835594
Alignment:
Q  182 ttttaaacaaaatttgtttcttgttatcttcaaatttaaacaaaattttgttac 235  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  3835647 ttttaaacaaagtttgtttcttgttatcttcaaatttaaacaaaattttgttac 3835594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 72 - 200
Target Start/End: Complemental strand, 7809309 - 7809181
Alignment:
Q  72 gttttggtattttgagggtatgatttatcaattatacactttgtcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaacta 171  Q
    ||||||||||||| ||| ||| |||| ||||||||||  ||| ||||||| | | || ||||| |||||||||||||||| |||| |||| | |||||||    
T  7809309 gttttggtattttaaggatattatttgtcaattataccatttctcaattacttttatctttttaaataaaactaattaatactatgtattaggaaaacta 7809210  T
Q  172 aagtttgttgttttaaacaaaatttgttt 200  Q
    |||||| || ||| ||||||| |||||||    
T  7809209 aagtttattttttaaaacaaattttgttt 7809181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 151
Target Start/End: Complemental strand, 39247460 - 39247325
Alignment:
Q  16 tccgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggta-ttttgagggtatgatttatcaattatacactttg 114  Q
    ||||||| |||||||||||| || ||| | |||| |  ||||||||||||| ||| ||||||||| |||| || ||||||||| |||||| ||| |||||    
T  39247460 tccgttcatttttaagtgtcgttctagtgcgaatttagcgttcctatttaactgtcgttttggtatttttaagagtatgatttgtcaattgtaccctttg 39247361  T
Q  115 tcaattattctaatatttttcaataaaactaattaat 151  Q
    || |||| ||| || ||||||||||||||||||||||    
T  39247360 tccattactcttat-tttttcaataaaactaattaat 39247325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 134 - 225
Target Start/End: Complemental strand, 2271953 - 2271863
Alignment:
Q  134 tcaataaaactaattaatgctatatatttgaaaaactaaagtttgttgttttaaacaaaatttgtttcttgttatcttcaaatttaaacaaa 225  Q
    ||||| ||| ||||||||||||| |||||| ||||||||||||| || | ||||||||| |||||||||||||||| | |||||||||||||    
T  2271953 tcaattaaattaattaatgctatctatttggaaaactaaagtttatt-tattaaacaaagtttgtttcttgttatcctaaaatttaaacaaa 2271863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 186 - 239
Target Start/End: Original strand, 15643449 - 15643502
Alignment:
Q  186 aaacaaaatttgtttcttgttatcttcaaatttaaacaaaattttgttacctat 239  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||| ||||    
T  15643449 aaacaaaatttgtttattgttatcttcaaatttaaacaaaattttgttagctat 15643502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 54 - 180
Target Start/End: Original strand, 44549986 - 44550112
Alignment:
Q  54 cgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattatacactttgtcaattattctaatatttttcaataaaactaattaatgc 153  Q
    ||||| ||||||| ||| ||||||||||||| |||||| ||||| ||| || |||  ||| ||||||| ||| || ||||||| |||||||||||||||     
T  44549986 cgttcttatttaactgtcgttttggtattttaagggtaagatttgtcacttgtaccatttctcaattactcttatctttttcattaaaactaattaatga 44550085  T
Q  154 tatatatttgaaaaactaaagtttgtt 180  Q
     || ||||| |||||| ||||| ||||    
T  44550086 catctattttaaaaacaaaagtatgtt 44550112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 186 - 234
Target Start/End: Original strand, 12394239 - 12394287
Alignment:
Q  186 aaacaaaatttgtttcttgttatcttcaaatttaaacaaaattttgtta 234  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  12394239 aaacaaagtttgtttcttgttatcatcaaatttaaacaaaattttgtta 12394287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 60 - 192
Target Start/End: Complemental strand, 41747331 - 41747201
Alignment:
Q  60 tatttaaatgttgttttggtattttgagggtatgatttatcaattatacactttgtcaattattctaatatttttcaataaaactaattaatgctatata 159  Q
    ||||||| | ||| ||||||||||| |||||| || || |||| |||||  ||||||| ||||||| ||  |||| ||| |||||||||| || ||||||    
T  41747331 tatttaattattgctttggtattttaagggtacgacttgtcaaatataccatttgtcagttattcttatcctttt-aatgaaactaattattgttatata 41747233  T
Q  160 tttgaaaaactaaagtttgttgttttaaacaaa 192  Q
    ||| ||| ||||||||||||| |||||||||||    
T  41747232 ttt-aaatactaaagtttgtttttttaaacaaa 41747201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 134 - 200
Target Start/End: Complemental strand, 27229675 - 27229608
Alignment:
Q  134 tcaataaaactaattaatgctatatatttgaaaaactaaagtttgtt-gttttaaacaaaatttgttt 200  Q
    |||||||||||||||||||||||  ||||| ||||||||||||||||  ||||||||||| |||||||    
T  27229675 tcaataaaactaattaatgctatcaatttggaaaactaaagtttgttatttttaaacaaagtttgttt 27229608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 186 - 237
Target Start/End: Complemental strand, 46672010 - 46671959
Alignment:
Q  186 aaacaaaatttgtttcttgttatcttcaaatttaaacaaaattttgttacct 237  Q
    ||||||||||| ||||||||||||||||||||||||||||  ||||||||||    
T  46672010 aaacaaaatttatttcttgttatcttcaaatttaaacaaatatttgttacct 46671959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 14 - 84
Target Start/End: Original strand, 38707223 - 38707292
Alignment:
Q  14 cctccgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtatttt 84  Q
    |||||||||||||| || ||| |||||||||||||| |||||||||||||||| | | |||||||||||||    
T  38707223 cctccgttccttttcaactgt-tttttagggtgaatttttcgttcctatttaactatcgttttggtatttt 38707292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 99 - 177
Target Start/End: Original strand, 43368785 - 43368863
Alignment:
Q  99 tcaattatacactttgtcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagttt 177  Q
    ||||| |||| |||||||||||| | | || ||||| ||||||||||||||| | |||||||||| |||||||||||||    
T  43368785 tcaatcataccctttgtcaattacttttatctttttaaataaaactaattaaagttatatatttggaaaactaaagttt 43368863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 2271318 - 2271358
Alignment:
Q  3 atatagtactccctccgttcctttttaagtgtctttttagg 43  Q
    ||||||||||||||||||| |||||||||||||||||||||    
T  2271318 atatagtactccctccgtttctttttaagtgtctttttagg 2271358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 180
Target Start/End: Original strand, 12394023 - 12394204
Alignment:
Q  6 tagtactccctccgttcctttttaagtgtc-tttttagggtgaatatttcgttcctatttaaatgttgttttggta-ttttgagggtatgatttatcaat 103  Q
    |||||||| | ||||||||||||||||||| |||||||||||||| || |||| |||||||| || | || | ||| |||| |||||| ||||| |||||    
T  12394023 tagtactcacaccgttcctttttaagtgtcttttttagggtgaattttccgtttctatttaactg-tcttatagtatttttcagggtaagatttgtcaat 12394121  T
Q  104 tatacactttgtcaa------ttattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagtttgtt 180  Q
    ||||   |||||| |      ||||  || | |||||| ||||||||||||||| || | |||||| ||||||||||||||||    
T  12394122 tatatcatttgtcgatcactcttatcttattttttttcgataaaactaattaatactgtctatttggaaaactaaagtttgtt 12394204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 54 - 148
Target Start/End: Complemental strand, 27229899 - 27229804
Alignment:
Q  54 cgttcctatttaaatgttgtttt-ggtattttgagggtatgatttatcaattatacactttgtcaattattctaatatttttcaataaaactaatt 148  Q
    ||||||||||||| ||||||||| |||||||| | || ||||||| ||| |||||  |||| |||| |||| | || |||||||||||||||||||    
T  27229899 cgttcctatttaactgttgtttttggtattttaaaggcatgatttctcacttatatgctttctcaactatttttatctttttcaataaaactaatt 27229804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 186 - 233
Target Start/End: Original strand, 27723404 - 27723450
Alignment:
Q  186 aaacaaaatttgtttcttgttatcttcaaatttaaacaaaattttgtt 233  Q
    |||||||||||||| |||||||| ||||||||||||||||||||||||    
T  27723404 aaacaaaatttgttccttgttat-ttcaaatttaaacaaaattttgtt 27723450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 130 - 180
Target Start/End: Original strand, 39427432 - 39427483
Alignment:
Q  130 tttttcaataaaactaa-ttaatgctatatatttgaaaaactaaagtttgtt 180  Q
    ||||| ||||||||||| ||||||||||||||||| ||||||||||||||||    
T  39427432 ttttttaataaaactaaattaatgctatatatttggaaaactaaagtttgtt 39427483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 111 - 174
Target Start/End: Complemental strand, 10026291 - 10026226
Alignment:
Q  111 tttgtcaattattctaatatttttcaataaaactaattaatg--ctatatatttgaaaaactaaag 174  Q
    ||||| ||||| ||| || |||||||||||||||||||||||   |||||||||||||||||||||    
T  10026291 tttgttaattactcttatctttttcaataaaactaattaatgttatatatatttgaaaaactaaag 10026226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 49
Target Start/End: Original strand, 39426216 - 39426257
Alignment:
Q  8 gtactccctccgttcctttttaagtgtctttttagggtgaat 49  Q
    |||||||||||||||||||||||||||| ||||| |||||||    
T  39426216 gtactccctccgttcctttttaagtgtcattttaaggtgaat 39426257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 186 - 225
Target Start/End: Complemental strand, 24394199 - 24394160
Alignment:
Q  186 aaacaaaatttgtttcttgttatcttcaaatttaaacaaa 225  Q
    ||||||||||| |||||||||||||||| |||||||||||    
T  24394199 aaacaaaatttatttcttgttatcttcatatttaaacaaa 24394160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 73
Target Start/End: Original strand, 39430784 - 39430831
Alignment:
Q  26 tttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgt 73  Q
    |||||||||| ||||||||||||| |||||||| ||||||| ||||||    
T  39430784 tttaagtgtcattttagggtgaatttttcgttcttatttaactgttgt 39430831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 202 - 233
Target Start/End: Original strand, 39617624 - 39617655
Alignment:
Q  202 ttgttatcttcaaatttaaacaaaattttgtt 233  Q
    ||||||||||||||||||||||||||||||||    
T  39617624 ttgttatcttcaaatttaaacaaaattttgtt 39617655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 39430575 - 39430522
Alignment:
Q  186 aaacaaaatttgtttcttgttatcttcaaatttaaacaaaattttgttacctatg 240  Q
    ||||||| ||||||| ||||||||||| |||| |||||||||||||||| |||||    
T  39430575 aaacaaagtttgtttattgttatcttc-aattgaaacaaaattttgttatctatg 39430522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 10534401 - 10534442
Alignment:
Q  1 aaatatagtactccctccgttcctttttaagtgtctttttag 42  Q
    |||||||||| || |||||||||||||||| |||||||||||    
T  10534401 aaatatagtattctctccgttcctttttaaatgtctttttag 10534442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 42
Target Start/End: Complemental strand, 16197486 - 16197453
Alignment:
Q  9 tactccctccgttcctttttaagtgtctttttag 42  Q
    |||||||||| |||||||||||||||||||||||    
T  16197486 tactccctccattcctttttaagtgtctttttag 16197453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 42
Target Start/End: Complemental strand, 25291108 - 25291075
Alignment:
Q  9 tactccctccgttcctttttaagtgtctttttag 42  Q
    ||||||||||||||||||||||||||| ||||||    
T  25291108 tactccctccgttcctttttaagtgtcgttttag 25291075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 42
Target Start/End: Complemental strand, 39434586 - 39434553
Alignment:
Q  9 tactccctccgttcctttttaagtgtctttttag 42  Q
    ||||||||||||||||||||||||||| ||||||    
T  39434586 tactccctccgttcctttttaagtgtcgttttag 39434553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 202 - 239
Target Start/End: Complemental strand, 42509749 - 42509712
Alignment:
Q  202 ttgttatcttcaaatttaaacaaaattttgttacctat 239  Q
    ||||||||| ||||||||||||||||||||||| ||||    
T  42509749 ttgttatctgcaaatttaaacaaaattttgttatctat 42509712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 42
Target Start/End: Original strand, 46671618 - 46671651
Alignment:
Q  9 tactccctccgttcctttttaagtgtctttttag 42  Q
    ||||||||||||||||||||||||||| ||||||    
T  46671618 tactccctccgttcctttttaagtgtcgttttag 46671651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 151
Target Start/End: Complemental strand, 1720038 - 1719906
Alignment:
Q  20 ttcctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattatacactttgtcaat 119  Q
    ||||||||||||| || ||| ||   |||||| | |||||||||||| |||||||||| || |||    |||| ||||||||||||||   ||| ||| |    
T  1720038 ttcctttttaagtttcgtttgagtacgaatatattgttcctatttaattgttgttttgatagtttatttgtataatttatcaattatatcatttctcagt 1719939  T
Q  120 tattc-taatatttttcaataaaactaattaat 151  Q
    ||||| || | ||||||||||||||| ||||||    
T  1719938 tattcttactctttttcaataaaacttattaat 1719906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 35
Target Start/End: Original strand, 31430537 - 31430565
Alignment:
Q  7 agtactccctccgttcctttttaagtgtc 35  Q
    |||||||||||||||||||||||||||||    
T  31430537 agtactccctccgttcctttttaagtgtc 31430565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 152; Significance: 1e-80; HSPs: 57)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 9 - 240
Target Start/End: Complemental strand, 32718157 - 32717923
Alignment:
Q  9 tactccctccgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattatac 108  Q
    |||||||||||||||||||||||||||||| || ||||||| |||||||||||||||| ||| |||||||| |||| ||| ||| |||| ||||||||||    
T  32718157 tactccctccgttcctttttaagtgtctttctatggtgaatttttcgttcctatttaactgtcgttttggttttttaaggatataatttgtcaattatac 32718058  T
Q  109 actttgtcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagtttg--ttgtttt-aaacaaaatttgtttcttgt 205  Q
     |||||||| ||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||  ||||||| |||||| |||| ||||||||    
T  32718057 cctttgtcagttattcttatatttttcaattaaactaattaatgctatatatttgaaaaactaaagtttgttttgttttaaaacaatatttatttcttgt 32717958  T
Q  206 tatcttcaaatttaaacaaaattttgttacctatg 240  Q
    |||||||||||||||||||||||||||||||||||    
T  32717957 tatcttcaaatttaaacaaaattttgttacctatg 32717923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 9 - 239
Target Start/End: Original strand, 16365643 - 16365875
Alignment:
Q  9 tactccctccgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattatac 108  Q
    ||||| ||||||||||||||||||||| ||||||| ||||| ||| |||||||||||| | | |||||| |||||| | |||||||||| ||||||||||    
T  16365643 tactctctccgttcctttttaagtgtcgttttaggatgaattttttgttcctatttaattatcgttttgatattttaaaggtatgatttgtcaattatac 16365742  T
Q  109 actttgtcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagtttgttgt---tttaaacaaaatttgtttcttgt 205  Q
      ||||||||||||||| ||||||||||||||||||||||| |||||||||||||  ||||||||||||||| |   |  ||||||||||||||||||||    
T  16365743 tttttgtcaattattcttatatttttcaataaaactaattagtgctatatatttg-gaaactaaagtttgttttgtctcaaaacaaaatttgtttcttgt 16365841  T
Q  206 tatcttcaaatttaaacaaaattttgttacctat 239  Q
    ||||||||||||||||||||||||||||||||||    
T  16365842 tatcttcaaatttaaacaaaattttgttacctat 16365875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 20 - 224
Target Start/End: Complemental strand, 12436897 - 12436695
Alignment:
Q  20 ttcctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattatacactttgtcaat 119  Q
    ||||||| ||||||||||||||| || ||| || |||||||||||||  ||  ||||| |||||| | ||||  ||||||||||||||| ||||||||||    
T  12436897 ttcctttgtaagtgtctttttagtgtaaattttgcgttcctatttaacggtgtttttgatattttaatggtacaatttatcaattatacgctttgtcaat 12436798  T
Q  120 tattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagtttgttgttttaaacaaaatttgtttcttgttatcttcaaattta 219  Q
    || ||| |||||||||||||||||||||||||||||| |||||||||||||| ||||  || |||||||||||||| |||||||||||||||||||||||    
T  12436797 tactcttatatttttcaataaaactaattaatgctatctatttgaaaaactacagtt--tttttttaaacaaaattcgtttcttgttatcttcaaattta 12436700  T
Q  220 aacaa 224  Q
    |||||    
T  12436699 aacaa 12436695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 1583362 - 1583597
Alignment:
Q  1 aaatatagtactccctccgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttga-gggtatgatttat 99  Q
    ||||||| ||||| ||||||||||||||||||||||| ||| ||||| | ||| ||| |||||||| |||| |||||| ||||| | ||||| ||||| |    
T  1583362 aaatatattactcactccgttcctttttaagtgtcttcttatggtgactttttggtttctatttaactgtttttttgggatttttaagggtacgatttgt 1583461  T
Q  100 caattatacactttgtcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagtttgttgtttt-aaacaaaatttgt 198  Q
    ||||||||| |||||||||| | |||  | ||||||||||||||||||||||||||| |||||| ||||||||||||| || |||| ||||||| |||||    
T  1583462 caattatactctttgtcaat-actcttgtctttttcaataaaactaattaatgctatctatttggaaaactaaagtttttttttttaaaacaaagtttgt 1583560  T
Q  199 ttcttgttatcttcaaatttaaacaaaattttgttac 235  Q
    || |||||||||||||| |||||||||||||||||||    
T  1583561 tttttgttatcttcaaacttaaacaaaattttgttac 1583597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 9 - 235
Target Start/End: Original strand, 17201140 - 17201377
Alignment:
Q  9 tactccctccgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattatac 108  Q
    ||||||||| ||||||| | ||||||||||||||| ||| | |||||||||||||||| |||  ||||  |||||| |||||||||||| |||||||||     
T  17201140 tactccctcggttccttct-aagtgtctttttaggatgatt-tttcgttcctatttaactgtcttttttatattttaagggtatgatttgtcaattatat 17201237  T
Q  109 actttgtcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagttt-------------gttgttttaaacaaaatt 195  Q
      ||||||||||| ||| || ||||||||||||||||||||||||||| |||||| |||||||||||||              || ||||||||||| ||    
T  17201238 catttgtcaattactcttatctttttcaataaaactaattaatgctatctatttggaaaactaaagttttttctaaacaaagttttttttaaacaaagtt 17201337  T
Q  196 tgtttcttgttatcttcaaatttaaacaaaattttgttac 235  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  17201338 tgtttcttgttatcttcaaatttaaacaaaattttgttac 17201377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 9 - 146
Target Start/End: Original strand, 17557868 - 17558005
Alignment:
Q  9 tactccctccgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattatac 108  Q
    |||||| || ||| ||||||||||||||||||||||||||| |||||||||||||||| ||| |||||| |||||| |||||||||||| ||||||||||    
T  17557868 tactccatctgtttctttttaagtgtctttttagggtgaatttttcgttcctatttaattgtcgttttgatattttaagggtatgatttgtcaattatac 17557967  T
Q  109 actttgtcaattattctaatatttttcaataaaactaa 146  Q
     |||||||||||||||| ||||||||||||| ||||||    
T  17557968 cctttgtcaattattcttatatttttcaatataactaa 17558005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 9 - 235
Target Start/End: Complemental strand, 18413527 - 18413316
Alignment:
Q  9 tactccctccgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattatac 108  Q
    ||||||||| ||||| ||||||||||||||||||||| | | |||||||||||||||| |||  |||||||||||| ||||||| |||||||||||||||    
T  18413527 tactccctcagttcccttttaagtgtctttttagggttattttttcgttcctatttaactgtctttttggtattttaagggtataatttatcaattatac 18413428  T
Q  109 actttgtcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagtttgttgttttaaacaaaatttgtttcttgttat 208  Q
     |||              || ||||||||||||  ||||||||||||  |||||| ||||||| ||||| || ||||||||| | |||||||||||||||    
T  18413427 cctt--------------atctttttcaataaat-taattaatgctagctatttggaaaactacagtttatttttttaaacacagtttgtttcttgttat 18413343  T
Q  209 cttcaaatttaaacaaaattttgttac 235  Q
    |||||||||||||||||||||||||||    
T  18413342 cttcaaatttaaacaaaattttgttac 18413316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 9 - 235
Target Start/End: Complemental strand, 8544906 - 8544685
Alignment:
Q  9 tactccctccgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattatac 108  Q
    ||||||||  |||| ||||||||||||||||| |  ||||| |||||||||||||||| ||   |||||||||||| | |||| ||||| |||||||||     
T  8544906 tactccctttgttcttttttaagtgtcttttttgaatgaatttttcgttcctatttaattgcc-ttttggtattttaatggtacgatttgtcaattatat 8544808  T
Q  109 actttgtcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagtttgttgttttaaacaaaatttgtttcttgttat 208  Q
      | ||||||||| ||| || ||||||||||||||||||||| | ||| |||||| ||||||| | |||    ||||||||||| |||||||||||||||    
T  8544807 catctgtcaattactcttatctttttcaataaaactaattaacgttatttatttggaaaactacatttt----ttttaaacaaagtttgtttcttgttat 8544712  T
Q  209 cttcaaatttaaacaaaattttgttac 235  Q
    ||||||||| |||||||||||||||||    
T  8544711 cttcaaattcaaacaaaattttgttac 8544685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 63 - 224
Target Start/End: Original strand, 19931802 - 19931962
Alignment:
Q  63 ttaaatgttgttttggtattttgagggtatgatttatcaattatacactttgtcaattattctaatatttttcaataaaactaattaatgctatatattt 162  Q
    ||||| || ||||| ||||||| ||| || ||||| ||| ||||||  ||||||||||||||| || ||||||||||||||||||| ||| |||||||||    
T  19931802 ttaaacgtcgttttagtattttaaggctacgatttgtcagttatactatttgtcaattattcttatctttttcaataaaactaattcatgttatatattt 19931901  T
Q  163 gaaaaactaaagtttgttgttttaaacaaaatttgtttcttgttatcttcaaatttaaacaa 224  Q
    | |||||||||||||||| ||| |||||||||||||||||||||||||||||||||| ||||    
T  19931902 g-aaaactaaagtttgttttttaaaacaaaatttgtttcttgttatcttcaaatttagacaa 19931962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 72 - 224
Target Start/End: Original strand, 19924863 - 19925013
Alignment:
Q  72 gttttggtattttgagggtatgatttatcaattatacactttgtcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaacta 171  Q
    ||||| ||||||| |||||| ||||| | | ||||||  ||||||||||||||| || ||||||||||||||||||| ||| |||||||||||||| |||    
T  19924863 gttttagtattttaagggtacgatttgt-agttataccatttgtcaattattcttatctttttcaataaaactaattcatgttatatatttgaaaa-cta 19924960  T
Q  172 aagtttgttgttttaaacaaaatttgtttcttgttatcttcaaatttaaacaa 224  Q
    ||||||||| ||| |||||||||||||||||||||||||||||||||||||||    
T  19924961 aagtttgttttttaaaacaaaatttgtttcttgttatcttcaaatttaaacaa 19925013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 62 - 239
Target Start/End: Original strand, 39614797 - 39614980
Alignment:
Q  62 tttaaatgttgttttggtattttgagggtatgatttatcaattatacactttgtcaattattctaatatttttcaataaaactaattaatgctatatatt 161  Q
    ||||| ||| ||||||||||||| | | || ||||| |||||||||  |||||| ||||| ||| || |||||||| |||||||||||||||||||||||    
T  39614797 tttaactgtcgttttggtattttaaagatacgatttgtcaattatatcctttgttaattactcttatctttttcaacaaaactaattaatgctatatatt 39614896  T
Q  162 tgaaaaactaaagtttg------ttgttttaaacaaaatttgtttcttgttatcttcaaatttaaacaaaattttgttacctat 239  Q
    ||||||| |||||||||      || ||||||||||| |||||||||| |||||||||||||||||||||||| ||||||||||    
T  39614897 tgaaaaattaaagtttgtttgtttttttttaaacaaagtttgtttcttattatcttcaaatttaaacaaaattgtgttacctat 39614980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 16 - 200
Target Start/End: Original strand, 14654862 - 14655030
Alignment:
Q  16 tccgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattatacactttgt 115  Q
    ||||||||||||||||||||||||||| || ||| |||||||| ||||||| ||| | ||||||||||| ||||||||||||                ||    
T  14654862 tccgttcctttttaagtgtctttttagcgtcaatttttcgttcttatttaattgtcgctttggtattttaagggtatgattt----------------gt 14654945  T
Q  116 caattattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagtttgttgttttaaacaaaatttgttt 200  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||| |||||||    
T  14654946 caattattcttatatttttcaataaaactaattaatgctatatatttggaaaactaaagtttgtttttttaaacaaattttgttt 14655030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 9 - 180
Target Start/End: Complemental strand, 17203002 - 17202832
Alignment:
Q  9 tactccctccgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattatac 108  Q
    |||||||||||||||||||||||||| ||||||| | || | |||| ||||||||||| |||  |||| ||||||| |||||||||||| ||||||||||    
T  17203002 tactccctccgttcctttttaagtgtttttttagagggatt-tttcattcctatttaactgtcttttttgtattttaagggtatgatttttcaattatac 17202904  T
Q  109 actttgtcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagtttgtt 180  Q
     |||||||||||| | | || ||| ||||||||||||||||||| ||| |||||| ||||||||||||||||    
T  17202903 cctttgtcaattacttttatctttatcaataaaactaattaatgttatctatttggaaaactaaagtttgtt 17202832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 12 - 234
Target Start/End: Complemental strand, 36437515 - 36437297
Alignment:
Q  12 tccctccgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattatacact 111  Q
    |||||||||| |||||||||||||||||| || ||||| ||||||| |||||||| |||  |||||||||||| || ||| ||||| |||||||||  ||    
T  36437515 tccctccgtttctttttaagtgtcttttttggatgaatttttcgttactatttaactgtctttttggtattttaagcgtacgatttttcaattatatcct 36437416  T
Q  112 ttgtcaattattctaatatttttcaataaaact-aattaatgctatatatttgaaaaactaaagtttgttgttttaaacaaaatttgtttcttgttatct 210  Q
    || ||||||| ||| || ||||||||||||||| |||||||||||| | |||| ||    ||||||  || | ||||||||| |||||||||  ||||||    
T  36437415 ttatcaattactcttatctttttcaataaaactaaattaatgctatctctttggaa---caaagtt--ttttattaaacaaagtttgtttctcattatct 36437321  T
Q  211 tcaaatttaaacaaaattttgtta 234  Q
    ||||||||||||||||||||||||    
T  36437320 tcaaatttaaacaaaattttgtta 36437297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 9 - 235
Target Start/End: Complemental strand, 43346857 - 43346622
Alignment:
Q  9 tactccctccgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaatta--- 105  Q
    ||||| ||||||||||||||||||||| |||||| |||||| ||| |||||||||||||| | ||||| ||||||| || ||| ||||| |||||||       
T  43346857 tactctctccgttcctttttaagtgtcgttttagagtgaattttttgttcctatttaaatctcgttttagtattttaagagtacgatttgtcaattactc 43346758  T
Q  106 ------tacactttgtcaa-ttattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagtttgttgttttaaacaaaatttgt 198  Q
          | | ||||||    ||| ||| || ||||| ||||||||||| |||||||||||||||  ||||||||||||| || ||||||| |||||||||    
T  43346757 gtatctttctctttgtttggttactcttatcttttttaataaaactaagtaatgctatatatttagaaaactaaagtttttt-ttttaaataaaatttgt 43346659  T
Q  199 ttcttgttatcttcaaatttaaacaaaattttgttac 235  Q
    |||||||||||| ||||||||||||||||||||||||    
T  43346658 ttcttgttatctacaaatttaaacaaaattttgttac 43346622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 15 - 203
Target Start/End: Complemental strand, 11992387 - 11992195
Alignment:
Q  15 ctccgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattatacactttg 114  Q
    ||||||||||||||||||||||||||||| ||||| ||  |||||||||||| | |  |||||||||||| | |||| ||||| ||||||||||| | ||    
T  11992387 ctccgttcctttttaagtgtctttttaggatgaattttctgttcctatttaactttctttttggtattttaaaggtacgatttgtcaattatacaatctg 11992288  T
Q  115 tcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagtttg----ttgttttaaacaaaatttgtttctt 203  Q
    ||||||| | | || ||||||| ||||| ||||||||||||| |||||| ||||||||||||||    || ||||||||||| ||||||||||    
T  11992287 tcaattacttttatctttttcagtaaaattaattaatgctatttatttggaaaactaaagtttgtttttttttttaaacaaagtttgtttctt 11992195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 9 - 200
Target Start/End: Original strand, 20201544 - 20201739
Alignment:
Q  9 tactccctccgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattatac 108  Q
    ||||||||| ||| ||||||||||||| ||||||| || |  |||||||| ||||||| |||  || ||||||||| ||||||| |||| ||||||||||    
T  20201544 tactccctctgtttctttttaagtgtcgttttaggatggacttttcgttcttatttaactgtctttctggtattttaagggtataatttgtcaattatac 20201643  T
Q  109 actttgtcaatt----attctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagtttgttgttttaaacaaaatttgttt 200  Q
     |||||||||||    | | | |||||||||||||||||||||||||| |||||||||| ||||||||||||| || ||||||| ||| |||||||    
T  20201644 cctttgtcaatttcttacttttatatttttcaataaaactaattaatgttatatatttggaaaactaaagtttatttttttaaagaaagtttgttt 20201739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 111 - 224
Target Start/End: Original strand, 19922151 - 19922263
Alignment:
Q  111 tttgtcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagtttgttgttttaaacaaaatttgtttcttgttatct 210  Q
    ||||||| ||||||| || ||||||||||||||||||| ||| |||||||||||||| |||||||||||| ||| |||||||||||||||||||||||||    
T  19922151 tttgtcagttattcttatctttttcaataaaactaattcatgttatatatttgaaaa-ctaaagtttgttttttaaaacaaaatttgtttcttgttatct 19922249  T
Q  211 tcaaatttaaacaa 224  Q
    ||||||||||||||    
T  19922250 tcaaatttaaacaa 19922263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 9 - 142
Target Start/End: Original strand, 28619899 - 28620034
Alignment:
Q  9 tactccctccgttcctttttaagtgtctttttagggtgaatatttcgttcctattta--aatgttgttttggtattttgagggtatgatttatcaattat 106  Q
    ||||||||||| || |||||||||||||||||||||||||| |||||||||||||||  | | || |||||||||||| |||||| ||||| |||||||     
T  28619899 tactccctccggtcttttttaagtgtctttttagggtgaatttttcgttcctatttaacagtttttttttggtattttaagggtacgatttgtcaattac 28619998  T
Q  107 acactttgtcaattattctaatatttttcaataaaa 142  Q
    || |||||||||||| ||| || |||||||||||||    
T  28619999 accctttgtcaattactcttatctttttcaataaaa 28620034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 51 - 203
Target Start/End: Original strand, 32474131 - 32474282
Alignment:
Q  51 tttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattatacactttgtcaattattctaatatttttcaataaaactaattaa 150  Q
    |||||||||||||||| |||  |||| ||||||| |||||| |||||  ||||||||| |||| ||||||| || | | |||||||||||||||||||||    
T  32474131 tttcgttcctatttaactgtcttttttgtattttaagggtacgatttgccaattataccctttatcaattactc-attttttttcaataaaactaattaa 32474229  T
Q  151 tgctatatatttgaaaaactaaagtttgttgttttaaacaaaatttgtttctt 203  Q
    |||||| |||||| |||| ||||||||||| ||||||||||| ||| ||||||    
T  32474230 tgctatctatttggaaaattaaagtttgtttttttaaacaaagtttttttctt 32474282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 2 - 130
Target Start/End: Complemental strand, 36060373 - 36060245
Alignment:
Q  2 aatatagtactccctccgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgatttatca 101  Q
    |||||| |||| |||||||||||||||||||||| ||||| ||||||| |||||||||||||||| ||| ||||||||||||| || ||| ||||| ||     
T  36060373 aatataatacttcctccgttcctttttaagtgtcgttttaaggtgaatttttcgttcctatttaactgtcgttttggtattttaagtgtacgatttgtcg 36060274  T
Q  102 attatacactttgtcaattattctaatat 130  Q
    ||||||| |||||||||||| ||| ||||    
T  36060273 attataccctttgtcaattactcttatat 36060245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 13 - 235
Target Start/End: Complemental strand, 42674260 - 42674027
Alignment:
Q  13 ccctccgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattatacactt 112  Q
    ||||||||| |||||||||| | |||||| ||||||| ||| ||| |||||||| |||  |||||||||||| ||||||  |||| ||||| |||| |||    
T  42674260 ccctccgtttctttttaagtatatttttaaggtgaattttttgtttctatttaactgtctttttggtattttaagggtacaatttgtcaatgataccctt 42674161  T
Q  113 tgtcaattattctaatatttttcaataaaa--------ctaattaatgctatatatttgaaaaactaaagtttgttgtttt---aaacaaaatttgtttc 201  Q
    ||||||||| ||| || |||   || ||||        |||||| ||| ||| |||||| ||||||||||||| || ||||   ||||||| ||||||||    
T  42674160 tgtcaattactcttatctttaaaaaaaaaaaaaaaaaactaattgatgttatctatttggaaaactaaagtttttttttttttaaaacaaagtttgtttc 42674061  T
Q  202 ttgttatcttcaaatttaaacaaaattttgttac 235  Q
    |||||||||||||||||||| |||||||||||||    
T  42674060 ttgttatcttcaaatttaaataaaattttgttac 42674027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 9 - 121
Target Start/End: Complemental strand, 249743 - 249631
Alignment:
Q  9 tactccctccgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattatac 108  Q
    ||||| ||||||||||||||||||||| ||||||| ||||| ||| |||||||||||| |||  |||| ||||||| ||| |||||||| ||||||||||    
T  249743 tactctctccgttcctttttaagtgtcgttttaggatgaattttttgttcctatttaactgtcattttagtattttaaggatatgatttgtcaattatac 249644  T
Q  109 actttgtcaatta 121  Q
     ||||||||||||    
T  249643 cctttgtcaatta 249631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 137 - 235
Target Start/End: Original strand, 6428276 - 6428375
Alignment:
Q  137 ataaaactaattaatgctatatatttgaaaaactaaagtttgttgttt-taaacaaaatttgtttcttgttatcttcaaatttaaacaaaattttgttac 235  Q
    |||||||||||||||||||| ||||||||||| ||||||||||| |||  ||||||| ||||||| |||||||||| |||||| ||||||||||||||||    
T  6428276 ataaaactaattaatgctatctatttgaaaaattaaagtttgttttttaaaaacaaagtttgtttgttgttatctttaaattttaacaaaattttgttac 6428375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 15 - 147
Target Start/End: Original strand, 19803578 - 19803708
Alignment:
Q  15 ctccgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattatacactttg 114  Q
    |||||||| |||||||||||||||| |||||  || ||||||| |||||||| |||  |||||||||||| |||||| ||||| |||||||||| |||||    
T  19803578 ctccgttcttttttaagtgtctttt-agggtatatttttcgtttctatttaactgtc-ttttggtattttaagggtacgatttgtcaattataccctttg 19803675  T
Q  115 tcaattattctaatatttttcaataaaactaat 147  Q
    ||||||| | | || ||||||||||||||||||    
T  19803676 tcaattacttttatctttttcaataaaactaat 19803708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 111 - 180
Target Start/End: Original strand, 1590163 - 1590232
Alignment:
Q  111 tttgtcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagtttgtt 180  Q
    ||||||||||| ||| || ||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  1590163 tttgtcaattactcttatcttttttaataaaactaattaatgctatatatttgaaaaactaaagtttgtt 1590232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 9 - 121
Target Start/End: Original strand, 37269360 - 37269472
Alignment:
Q  9 tactccctccgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattatac 108  Q
    ||||| |||| |||||||||||||||  |||||| |||||| ||| |||||||||||| ||| |||||| |||||| ||| || |||| |||||||||||    
T  37269360 tactctctccattcctttttaagtgttgttttagagtgaattttttgttcctatttaactgtcgttttgatattttaaggatacgattgatcaattatac 37269459  T
Q  109 actttgtcaatta 121  Q
     ||||||||||||    
T  37269460 cctttgtcaatta 37269472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 179 - 238
Target Start/End: Original strand, 20201743 - 20201803
Alignment:
Q  179 ttgttttaaacaaaa-tttgtttcttgttatcttcaaatttaaacaaaattttgttaccta 238  Q
    ||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||    
T  20201743 ttgttttaaaccaaactttgtttcttgttatcttcaaatttaaacaaaattttgttaccta 20201803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 80 - 199
Target Start/End: Complemental strand, 36246389 - 36246269
Alignment:
Q  80 attttgagggtatgatttatcaattatacactttgtcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagtttgt 179  Q
    ||||| |||||| ||||| ||| |||||| |||| ||||||| ||| || |||||||||||||||||| ||| |||| | |||| |||||||||||||||    
T  36246389 attttaagggtacgatttgtcacttataccctttctcaattactcttatctttttcaataaaactaatgaatactatctgtttggaaaactaaagtttgt 36246290  T
Q  180 t-gttttaaacaaaatttgtt 199  Q
    |  ||||| ||||||||||||    
T  36246289 tatttttatacaaaatttgtt 36246269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 9 - 106
Target Start/End: Complemental strand, 11825630 - 11825533
Alignment:
Q  9 tactccctccgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattat 106  Q
    ||||| |||||||||||||||| |||| ||| ||||||||| ||| |||| ||||||| ||| ||||| ||||||| |||||| ||||| ||||||||    
T  11825630 tactctctccgttcctttttaattgtcgtttaagggtgaattttttgttcttatttaactgtcgttttcgtattttaagggtacgatttgtcaattat 11825533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 176 - 233
Target Start/End: Complemental strand, 17202398 - 17202341
Alignment:
Q  176 ttgttgttttaaacaaaatttgtttcttgttatcttcaaatttaaacaaaattttgtt 233  Q
    ||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||    
T  17202398 ttgtttttttaaacaaagttggtttcttgttatcttcaaatttaaacaaaattttgtt 17202341  T

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Target: chr5; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 94 - 181
Target Start/End: Complemental strand, 39940399 - 39940311
Alignment:
Q  94 atttatcaattatacactttgtcaattattctaatatttttc-aataaaactaattaatgctatatatttgaaaaactaaagtttgttg 181  Q
    |||||||||||||||  ||||||||| | ||| ||||||||  ||||||||||||||||||||| |||||| | ||||||| |||||||    
T  39940399 atttatcaattataccttttgtcaataactcttatatttttttaataaaactaattaatgctatctatttggataactaaattttgttg 39940311  T

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Target: chr5; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 249520 - 249470
Alignment:
Q  182 ttttaaacaaaatttgtttcttgttatcttcaaatttaaacaaaattttgttac 235  Q
    ||||||||||||||||||||||||||||||   |||||||||||||||||||||    
T  249520 ttttaaacaaaatttgtttcttgttatctt---atttaaacaaaattttgttac 249470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 130 - 177
Target Start/End: Complemental strand, 249596 - 249549
Alignment:
Q  130 tttttcaataaaactaattaatgctatatatttgaaaaactaaagttt 177  Q
    ||||| |||||||||||||||||||||||||||| |||||||||||||    
T  249596 ttttttaataaaactaattaatgctatatatttggaaaactaaagttt 249549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 130 - 221
Target Start/End: Complemental strand, 6434122 - 6434031
Alignment:
Q  130 tttttcaataaaactaattaatgctatatatttgaaaaactaaagtttgttgttttaaacaaaatttgtttcttgttatcttcaaatttaaa 221  Q
    |||||||||||| |||||||||  ||| ||||||||||| | ||||||||| ||||||| ||| ||| ||| ||||||| | ||||||||||    
T  6434122 tttttcaataaatctaattaatattatctatttgaaaaatttaagtttgtttttttaaataaagtttattttttgttatttgcaaatttaaa 6434031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 60 - 172
Target Start/End: Complemental strand, 31889580 - 31889466
Alignment:
Q  60 tatttaaatgttgttttggtattttgagggtatgatttatcaattatacactttgtcaattattctaat--atttttcaataaaactaattaatgctata 157  Q
    ||||||| ||||| |||| |||||| | | ||||||| |||||||||||| |||   ||||||| | ||  ||||||||||||||||||| |||| ||||    
T  31889580 tatttaattgttgatttgatattttaaagttatgattaatcaattatacatttttctaattattattatttatttttcaataaaactaataaatgatata 31889481  T
Q  158 tatttgaaaaactaa 172  Q
    |||| ||||||||||    
T  31889480 tattcgaaaaactaa 31889466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 136 - 190
Target Start/End: Original strand, 37269522 - 37269576
Alignment:
Q  136 aataaaactaattaatgctatatatttgaaaaactaaagtttgttgttttaaaca 190  Q
    ||||||||||||||||| |||||||||| ||||||||| |||||| |||||||||    
T  37269522 aataaaactaattaatgatatatatttggaaaactaaaatttgtttttttaaaca 37269576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 194 - 235
Target Start/End: Original strand, 32474294 - 32474335
Alignment:
Q  194 tttgtttcttgttatcttcaaatttaaacaaaattttgttac 235  Q
    |||||||||||||||||||||||||||| |||||||||||||    
T  32474294 tttgtttcttgttatcttcaaatttaaataaaattttgttac 32474335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 224
Target Start/End: Complemental strand, 19133476 - 19133422
Alignment:
Q  172 aagtttgttgtttt--aaacaaaatttgtttcttgttatcttcaaatttaaacaa 224  Q
    ||||||||| ||||  ||||||||||||||||||||| |||||||||||||||||    
T  19133476 aagtttgttttttttaaaacaaaatttgtttcttgttgtcttcaaatttaaacaa 19133422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 86 - 180
Target Start/End: Original strand, 17591635 - 17591728
Alignment:
Q  86 agggtatgatttatcaattatacactttgtcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagtttgtt 180  Q
    |||||||||||| ||| ||||||  ||| | ||||| ||| || ||||||||||||||||| ||||| |||  ||||| ||||||||||||||||    
T  17591635 agggtatgatttgtcatttataccatttcttaattactcttatctttttcaataaaactaa-taatgttatcaatttggaaaactaaagtttgtt 17591728  T

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Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 42
Target Start/End: Complemental strand, 28620680 - 28620647
Alignment:
Q  9 tactccctccgttcctttttaagtgtctttttag 42  Q
    ||||||||||||||||||||||||||||||||||    
T  28620680 tactccctccgttcctttttaagtgtctttttag 28620647  T

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Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 60 - 162
Target Start/End: Complemental strand, 39585881 - 39585777
Alignment:
Q  60 tatttaaatgttgttttggtattttgagggtatgatttatcaattatacactttgtcaattattctaatatttt--tcaataaaactaattaatgctata 157  Q
    |||||||  ||| |||||||||||| ||| || ||||| || |||| |  ||||||||||| |||| || ||||  |||||||||||||||||||||||     
T  39585881 tatttaaccgtttttttggtattttaaggatacgatttgtcgattacatcctttgtcaattgttcttatcttttattcaataaaactaattaatgctatc 39585782  T
Q  158 tattt 162  Q
    |||||    
T  39585781 tattt 39585777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 186 - 230
Target Start/End: Complemental strand, 11992188 - 11992144
Alignment:
Q  186 aaacaaaatttgtttcttgttatcttcaaatttaaacaaaatttt 230  Q
    ||||||| ||| ||||||||||||| |||||||||||||||||||    
T  11992188 aaacaaagtttatttcttgttatctccaaatttaaacaaaatttt 11992144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 186 - 226
Target Start/End: Original strand, 14655042 - 14655082
Alignment:
Q  186 aaacaaaatttgtttcttgttatcttcaaatttaaacaaaa 226  Q
    |||||||||||||||||||||||||||||||| ||| ||||    
T  14655042 aaacaaaatttgtttcttgttatcttcaaattgaaaaaaaa 14655082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 199
Target Start/End: Complemental strand, 18552560 - 18552493
Alignment:
Q  133 ttcaataaaactaattaatgctatatatttgaaaaactaaagtttgtt-gttttaaacaaaatttgtt 199  Q
    |||||||||||||||||||| ||| |||||  ||||||||||||  ||  ||||||||||||||||||    
T  18552560 ttcaataaaactaattaatgatatctatttagaaaactaaagttcattatttttaaacaaaatttgtt 18552493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 35
Target Start/End: Complemental strand, 4175741 - 4175711
Alignment:
Q  5 atagtactccctccgttcctttttaagtgtc 35  Q
    |||||||||||||||||||||||||||||||    
T  4175741 atagtactccctccgttcctttttaagtgtc 4175711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 109
Target Start/End: Original strand, 10704409 - 10704459
Alignment:
Q  59 ctatttaaatgttgttttggtattttgagggtatgatttatcaattataca 109  Q
    |||||||| ||||||||||||| ||| |||||||||||| ||||| |||||    
T  10704409 ctatttaactgttgttttggtagtttaagggtatgatttgtcaatgataca 10704459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 200
Target Start/End: Complemental strand, 36060249 - 36060204
Alignment:
Q  154 tatatatttgaaaaactaaagtttgttgttttaaacaaaatttgttt 200  Q
    |||||||||  |||||||||||||||| |||||||||||||||||||    
T  36060249 tatatatttagaaaactaaagtttgtt-ttttaaacaaaatttgttt 36060204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 224
Target Start/End: Original strand, 37269588 - 37269626
Alignment:
Q  186 aaacaaaatttgtttcttgttatcttcaaatttaaacaa 224  Q
    |||||||||||||||| ||||||||||| ||||||||||    
T  37269588 aaacaaaatttgtttcctgttatcttcagatttaaacaa 37269626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 178
Target Start/End: Original strand, 39584793 - 39584903
Alignment:
Q  68 tgttgttttggtattttgagggtatgatttatcaattatacactttgtcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaa 167  Q
    |||| ||||| |||||| | | ||| |||| ||||||| || |||| | | ||||||| || |||||| ||||||| |||||||  ||| |||||| |||    
T  39584793 tgttattttgttattttaaagatataatttgtcaattaaactctttcttagttattcttatctttttcgataaaaccaattaatcttatgtatttggaaa 39584892  T
Q  168 actaaagtttg 178  Q
    |||||||||||    
T  39584893 actaaagtttg 39584903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 40
Target Start/End: Complemental strand, 19831799 - 19831766
Alignment:
Q  7 agtactccctccgttcctttttaagtgtcttttt 40  Q
    ||||||||||| ||||||||||||||||||||||    
T  19831799 agtactccctctgttcctttttaagtgtcttttt 19831766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 36
Target Start/End: Complemental strand, 9127609 - 9127581
Alignment:
Q  8 gtactccctccgttcctttttaagtgtct 36  Q
    |||||||||||||||||||||||||||||    
T  9127609 gtactccctccgttcctttttaagtgtct 9127581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 170
Target Start/End: Complemental strand, 11825487 - 11825447
Alignment:
Q  130 tttttcaataaaactaattaatgctatatatttgaaaaact 170  Q
    ||||||||||||||||||||||| | |||||||| ||||||    
T  11825487 tttttcaataaaactaattaatgttgtatatttggaaaact 11825447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 211 - 239
Target Start/End: Original strand, 14967649 - 14967677
Alignment:
Q  211 tcaaatttaaacaaaattttgttacctat 239  Q
    |||||||||||||||||||||||||||||    
T  14967649 tcaaatttaaacaaaattttgttacctat 14967677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 41
Target Start/End: Complemental strand, 20202320 - 20202288
Alignment:
Q  9 tactccctccgttcctttttaagtgtcttttta 41  Q
    ||||||||||||||||||||||||||| |||||    
T  20202320 tactccctccgttcctttttaagtgtcgtttta 20202288  T

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Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 185
Target Start/End: Complemental strand, 36194105 - 36194021
Alignment:
Q  101 aattatacactttgtcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagtttgttgtttt 185  Q
    ||||||||  ||| |||| || ||| || ||||| ||| ||||||||||||| ||| ||||||||||| ||||||| ||| ||||    
T  36194105 aattataccatttttcaagtactcttatctttttgaatcaaactaattaatgttatctatttgaaaaattaaagttcgttatttt 36194021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 42
Target Start/End: Original strand, 39585343 - 39585371
Alignment:
Q  14 cctccgttcctttttaagtgtctttttag 42  Q
    |||||||||||||||||||||||||||||    
T  39585343 cctccgttcctttttaagtgtctttttag 39585371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1130 (Bit Score: 149; Significance: 8e-79; HSPs: 2)
Name: scaffold1130
Description:

Target: scaffold1130; HSP #1
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 5 - 240
Target Start/End: Original strand, 293 - 525
Alignment:
Q  5 atagtactccctccgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaatt 104  Q
    |||||||| |||||||||||||||||||||||||||||||||||  ||||||| |||||||| ||| ||||||||||||  |||||||||||| |||||     
T  293 atagtacttcctccgttcctttttaagtgtctttttagggtgaaattttcgtttctatttaactgtcgttttggtatttaaagggtatgatttttcaatc 392  T
Q  105 atacactttgtcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagtttgttgttttaaacaaaatttgtttcttg 204  Q
    |||| |||||||||||||||| ||| |||||||||||||||||||||| |||||||||| |||||||||||||||  ||| |||||||||||||||||||    
T  393 ataccctttgtcaattattcttataattttcaataaaactaattaatgttatatatttg-aaaactaaagtttgt--tttaaaacaaaatttgtttcttg 489  T
Q  205 ttatcttcaaatttaaacaaaattttgttacctatg 240  Q
    | |||||||||||||||||||||||||||| |||||    
T  490 tcatcttcaaatttaaacaaaattttgttatctatg 525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1130; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 41
Target Start/End: Complemental strand, 866 - 834
Alignment:
Q  9 tactccctccgttcctttttaagtgtcttttta 41  Q
    ||||||||||||||||||||||||||| |||||    
T  866 tactccctccgttcctttttaagtgtcgtttta 834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 137; Significance: 1e-71; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 9 - 240
Target Start/End: Complemental strand, 1674944 - 1674708
Alignment:
Q  9 tactccctccgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattatac 108  Q
    ||||||||||||| ||||||||||||||||||||| ||||| |||||||||| ||||| ||| ||||| ||||||| |||||| ||||| ||||||||||    
T  1674944 tactccctccgtttctttttaagtgtctttttaggatgaatttttcgttcct-tttaactgtcgttttagtattttaagggtacgatttgtcaattatac 1674846  T
Q  109 actttgtcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagtttgttgtttt-------aaacaaaatttgtttc 201  Q
     |||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||       ||| ||||||||||||    
T  1674845 -ctttgtcaattattcttatatttttcaataaaactaattaatgttatatatttgaaaaactaaagtttgtttttttggttttaaaataaaatttgtttc 1674747  T
Q  202 ttgttatcttcaaatttaaacaaaattttgttacctatg 240  Q
    |||||||||||||||||||| |||||||||||| |||||    
T  1674746 ttgttatcttcaaatttaaataaaattttgttatctatg 1674708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 4 - 233
Target Start/End: Complemental strand, 6295930 - 6295699
Alignment:
Q  4 tatagtactccctccgttcctttttaagtgtctttttagggtgaatattt-cgttcctatttaaatgttgttttggtattttgagggtatgatttatcaa 102  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| ||| ||||| ||||||| |||  |||||||||||| |||||  ||||||| ||    
T  6295930 tatactactccctccgttcctttttaagtgtctttttagggtgaattttttcgttcttatttaactgtctttttggtattttaagggtgcgatttattaa 6295831  T
Q  103 ttatacactttgtcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaa-agtttgttgttttaaacaaaatttgtttc 201  Q
    |||||| |||||||| ||| | | || ||||| ||||||||||||||||||||| |||||||||||||||   ||| || ||||||||||||||||||||    
T  6295830 ttataccctttgtcacttacttttatctttttaaataaaactaattaatgctatctatttgaaaaactaattttttttttttttaaacaaaatttgtttc 6295731  T
Q  202 ttgttatcttcaaatttaaacaaaattttgtt 233  Q
    ||||||||||||||||||||||||||||||||    
T  6295730 ttgttatcttcaaatttaaacaaaattttgtt 6295699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 9 - 200
Target Start/End: Complemental strand, 11238422 - 11238231
Alignment:
Q  9 tactccctccgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattatac 108  Q
    ||||| |||||||| |||||||||||||||||||||||||| |||||||||||||||| ||| ||||||||||||| |||||| ||||| ||| ||||||    
T  11238422 tactctctccgttcttttttaagtgtctttttagggtgaatttttcgttcctatttaactgtggttttggtattttaagggtacgatttgtcagttatac 11238323  T
Q  109 actttgtcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagtttgttgttttaaacaaaatttgttt 200  Q
     ||||| |||||||||| |||||||||||||||||||||||||| |||||||||| ||||||||| ||| || ||||||||||| |||||||    
T  11238322 cctttggcaattattcttatatttttcaataaaactaattaatgatatatatttggaaaactaaaatttatttttttaaacaaagtttgttt 11238231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 20 - 225
Target Start/End: Original strand, 2655638 - 2655844
Alignment:
Q  20 ttcctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattatacactttgtcaat 119  Q
    ||||||||||||||||||   | ||||||| |||||||||||||||| ||  ||||||||||||| |||||| ||||||||||||||||  |||||||||    
T  2655638 ttcctttttaagtgtctt---aaggtgaatttttcgttcctatttaattgccgttttggtattttaagggtacgatttatcaattataccatttgtcaat 2655734  T
Q  120 tattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagtt----tgttgttttaaacaaaatttgtttcttgttatcttcaaa 215  Q
    || ||| |||||||||||||||||||||||||| |||||||||| ||||||||||||    | || ||| ||||||||||||||||||||||||||||||    
T  2655735 tactcttatatttttcaataaaactaattaatgttatatatttggaaaactaaagtttttattttttttaaaacaaaatttgtttcttgttatcttcaaa 2655834  T
Q  216 tttaaacaaa 225  Q
    ||||||||||    
T  2655835 tttaaacaaa 2655844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 18 - 235
Target Start/End: Original strand, 39386615 - 39386831
Alignment:
Q  18 cgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattatacactttgtca 117  Q
    |||||||||||||||||||||||||| ||| | |||| ||||||||||| |||  |||| ||||||| |||||||||||| |||||||||| ||||||||    
T  39386615 cgttcctttttaagtgtctttttaggatgagtttttctttcctatttaagtgtctttttagtattttaagggtatgatttttcaattataccctttgtca 39386714  T
Q  118 attattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagttt-gttgttttaaacaaaatttgtttcttgttatcttcaaat 216  Q
    |||| ||| || |||||||||  ||||||||||| | || |||||| |||| ||||||||  || ||||||||||| |||||||||||||||||||||||    
T  39386715 attactcttatctttttcaat--aactaattaatacaatctatttggaaaaataaagtttattttttttaaacaaagtttgtttcttgttatcttcaaat 39386812  T
Q  217 ttaaacaaaattttgttac 235  Q
    |||||||||||||||||||    
T  39386813 ttaaacaaaattttgttac 39386831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 11 - 225
Target Start/End: Complemental strand, 36320143 - 36319926
Alignment:
Q  11 ctccctccgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattatacac 110  Q
    |||||| ||||||||||||| ||||||||||||||| || |||||||| ||||||| |||  |||||||||||| ||| || ||||| ||||||||||      
T  36320143 ctcccttcgttcctttttaaatgtctttttagggtgcatttttcgttcttatttaactgtctttttggtattttaagg-tacgatttgtcaattatacca 36320045  T
Q  111 tttgtcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagtttg----ttgttttaaacaaaatttgtttcttgtt 206  Q
    ||||||||||| ||| || ||||||||||||||||||||||||||| |||||| |||||||| |||||    || ||||||||||| |||||||||||||    
T  36320044 tttgtcaattactcttatctttttcaataaaactaattaatgctatctatttggaaaactaatgtttgtttttttttttaaacaaagtttgtttcttgtt 36319945  T
Q  207 atcttcaaatttaaacaaa 225  Q
    |||||||||||||||||||    
T  36319944 atcttcaaatttaaacaaa 36319926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 18 - 193
Target Start/End: Complemental strand, 788451 - 788278
Alignment:
Q  18 cgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattatacactttgtca 117  Q
    ||||| ||||||||||||||||||| | |||| |||||||||||||||| | | ||||||||||||| ||  |||||||||||||||||||  |||||||    
T  788451 cgttcttttttaagtgtctttttagagagaatttttcgttcctatttaattatcgttttggtattttaag--tatgatttatcaattataccatttgtca 788354  T
Q  118 attattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagtttgttgttttaaacaaaa 193  Q
    ||||||||||||||||||||||||||||||||||| |||||||||| |||| ||||||||||| ||| ||||||||    
T  788353 attattctaatatttttcaataaaactaattaatgttatatatttggaaaaataaagtttgttttttaaaacaaaa 788278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 9 - 235
Target Start/End: Complemental strand, 13254938 - 13254709
Alignment:
Q  9 tactccctccgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgtttt---ggtattttgagggtatgatttatcaatta 105  Q
    |||||||||||||| |||| ||||||||||||||||| ||| |||||||| |||| |  |||| ||||   |||||||| |||||| ||||| |||||||    
T  13254938 tactccctccgttctttttaaagtgtctttttagggtaaatttttcgttcatatt-agctgtttttttattggtattttaagggtacgatttgtcaatta 13254840  T
Q  106 tacactttgtcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagtttgtt-gttttaaacaaaatttgtttcttg 204  Q
    |||  ||| ||||||| ||| || ||||||||||||||||||||||||||| |||||| | ||||||||||| ||  ||||||||||||||||||||||     
T  13254839 taccttttatcaattactcttatctttttcaataaaactaattaatgctatctatttggagaactaaagtttattatttttaaacaaaatttgtttctta 13254740  T
Q  205 ttatcttcaaatttaaacaaaattttgttac 235  Q
    ||||||||||||||||| |||||||||||||    
T  13254739 ttatcttcaaatttaaataaaattttgttac 13254709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 5 - 239
Target Start/End: Complemental strand, 31623292 - 31623045
Alignment:
Q  5 atagtactccctccgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaatt 104  Q
    |||||||| |||||||||||  |||| |||||||||| ||||||| || | ||||||||||  |||||||  | |||||| | ||||| |||||||||||    
T  31623292 atagtacttcctccgttcctggttaaatgtctttttaaggtgaatgttcctttcctatttagctgttgttcggatattttaaaggtataatttatcaatt 31623193  T
Q  105 atacactttgtcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagtttgttgtttt-------------aaacaa 191  Q
    |||| |||| ||||||||||| ||||||||| |||||| ||||||||| |||||||||  ||||||||| |||||| ||||             ||||||    
T  31623192 ataccctttatcaattattcttatatttttccataaaattaattaatgttatatatttcgaaaactaaaatttgtttttttaagttttgttttaaaacaa 31623093  T
Q  192 aatttgtttcttgttatcttcaaatttaaacaaaattttgttacctat 239  Q
    |||||||||||| ||||||| ||||||||||||| |||||||| ||||    
T  31623092 aatttgtttcttcttatctttaaatttaaacaaatttttgttaactat 31623045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 9 - 121
Target Start/End: Original strand, 52414825 - 52414937
Alignment:
Q  9 tactccctccgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattatac 108  Q
    ||||||||||||||||||||||||||||||| ||||||||| ||| |||||||||||| ||| ||||||||||||| |||||||||||| |||||||||     
T  52414825 tactccctccgttcctttttaagtgtcttttaagggtgaattttttgttcctatttaactgtcgttttggtattttaagggtatgatttgtcaattataa 52414924  T
Q  109 actttgtcaatta 121  Q
     ||||||||||||    
T  52414925 cctttgtcaatta 52414937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 9 - 208
Target Start/End: Original strand, 3900933 - 3901130
Alignment:
Q  9 tactccctccgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattatac 108  Q
    |||||| |||||||||||||||||||| ||| |  |||||| |  |||||||||||||  ||  ||||| |||||| ||||||  |||||||||||||||    
T  3900933 tactccatccgttcctttttaagtgtcgtttgaatgtgaatttagcgttcctatttaaccgtcattttgatattttaagggtacaatttatcaattatac 3901032  T
Q  109 actttgtcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagtttgttgttttaaacaaaatttgtttcttgttat 208  Q
     ||||||  |||| ||| || |||||||| |||||||||||||| |||| ||||||||||||||||||| || ||| ||||||| |||||||||||||||    
T  3901033 cctttgttgattactcttatctttttcaa-aaaactaattaatgttataaatttgaaaaactaaagttt-ttttttaaaacaaagtttgtttcttgttat 3901130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 9 - 208
Target Start/End: Complemental strand, 50488937 - 50488740
Alignment:
Q  9 tactccctccgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattatac 108  Q
    |||||| |||||||||||||||||||| ||| |  |||||| |  |||||||||||||  ||  ||||| |||||| ||||||  |||||||||||||||    
T  50488937 tactccatccgttcctttttaagtgtcgtttgaatgtgaatttagcgttcctatttaaccgtcattttgatattttaagggtacaatttatcaattatac 50488838  T
Q  109 actttgtcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagtttgttgttttaaacaaaatttgtttcttgttat 208  Q
     ||||||  |||| ||| || |||||||| |||||||||||||| |||| ||||||||||||||||||| || ||| ||||||| |||||||||||||||    
T  50488837 cctttgttgattactcttatctttttcaa-aaaactaattaatgttataaatttgaaaaactaaagttt-ttttttaaaacaaagtttgtttcttgttat 50488740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 130 - 235
Target Start/End: Original strand, 52414972 - 52415078
Alignment:
Q  130 tttttcaataaaactaattaatgctatatatttgaaaaactaaagtttgttgtttt-aaacaaaatttgtttcttgttatcttcaaatttaaacaaaatt 228  Q
    ||||| ||||||||||||||||| |||||||||| |||||||||||||||| |||| |||||||||||||||||| ||||||||| ||||||||||||||    
T  52414972 ttttttaataaaactaattaatgttatatatttggaaaactaaagtttgttttttttaaacaaaatttgtttcttcttatcttcagatttaaacaaaatt 52415071  T
Q  229 ttgttac 235  Q
    |||||||    
T  52415072 ttgttac 52415078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 14 - 239
Target Start/End: Complemental strand, 4396226 - 4396001
Alignment:
Q  14 cctccgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattatacacttt 113  Q
    |||||||||||||||||||||| || ||| ||  || |   |||| ||||||| ||| ||||| ||||||| || |||| |||| ||||||||  |||||    
T  4396226 cctccgttcctttttaagtgtcgttctagtgtagatttagtgttcttatttaactgtagttttagtattttaagagtataatttgtcaattatttacttt 4396127  T
Q  114 gtcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagttt-gttg-----ttttaaacaaaatttgtttcttgtta 207  Q
    |||||||| ||  || |||||||||||||||||||||||      ||||||||||||||||||| ||||     ||||||||||| ||||||||| ||||    
T  4396126 gtcaattactcatat-tttttcaataaaactaattaatga-----atttgaaaaactaaagtttggttgttgttttttaaacaaagtttgtttctcgtta 4396033  T
Q  208 tcttcaaatttaaacaaaattttgttacctat 239  Q
     ||| |||||||||||||| ||||||||||||    
T  4396032 gcttaaaatttaaacaaaactttgttacctat 4396001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 130 - 225
Target Start/End: Original strand, 32769027 - 32769124
Alignment:
Q  130 tttttcaataaaactaattaatgctatatatttgaaaaactaaagtttgttgttt--taaacaaaatttgtttcttgttatcttcaaatttaaacaaa 225  Q
    ||||| ||||||||||||||||| |||||||||||||||||||||||| || |||   |||||||||||||||||||||||||||| |||||||||||    
T  32769027 ttttttaataaaactaattaatgatatatatttgaaaaactaaagtttattttttaaaaaacaaaatttgtttcttgttatcttcatatttaaacaaa 32769124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 130 - 225
Target Start/End: Original strand, 4671450 - 4671546
Alignment:
Q  130 tttttcaataaaactaattaatgctatatatttgaaaaactaaagtttgttgtttt-aaacaaaatttgtttcttgttatcttcaaatttaaacaaa 225  Q
    ||||| |||||||||||||||| ||||||||||| ||||||||| |||||| |||| |||||||||||||||||| ||||||||| |||||||||||    
T  4671450 ttttttaataaaactaattaatactatatatttggaaaactaaaatttgtttttttaaaacaaaatttgtttcttattatcttcagatttaaacaaa 4671546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 9 - 173
Target Start/End: Original strand, 43021044 - 43021208
Alignment:
Q  9 tactccctccgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattatac 108  Q
    ||||||||||||| ||||||||||||| ||| ||   | || |  |||| |||||||| | | ||||||||| ||| || ||| ||||| ||||||||||    
T  43021044 tactccctccgtttctttttaagtgtcgtttgagtacggatttaccgtttctatttaactctcgttttggtactttaagagtacgatttgtcaattatac 43021143  T
Q  109 actttgtcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaa 173  Q
      |||| |||||| ||| |||||| ||||||||||||||||||| ||||||||||||||||||||    
T  43021144 catttgccaattactcttatatttatcaataaaactaattaatgttatatatttgaaaaactaaa 43021208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 99 - 195
Target Start/End: Complemental strand, 10430609 - 10430513
Alignment:
Q  99 tcaattatacactttgtcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagtttgttgttttaaacaaaatt 195  Q
    ||||||||||  ||||||||||| ||| || ||||| |||||||||||||||||||||||||||| |||||| ||||||||  ||||||||||||||    
T  10430609 tcaattataccatttgtcaattactcttatcttttttaataaaactaattaatgctatatatttgcaaaactcaagtttgtatttttaaacaaaatt 10430513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 9 - 192
Target Start/End: Complemental strand, 40519385 - 40519193
Alignment:
Q  9 tactccctccgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaatta--- 105  Q
    ||||||||||||||||||||||||| | |||||||||| || ||| |||| |||||||  || ||||| ||||||| ||||| |||||| |||||||       
T  40519385 tactccctccgttcctttttaagtgccgttttagggtgcattttttgttc-tatttaaccgtcgttttagtattttaagggtgtgatttgtcaattactc 40519287  T
Q  106 -taca-----ctttgtcaa-ttattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagtttgttgttttaaacaaa 192  Q
     || |     ||||||    ||| ||| || ||||| |||||||||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  40519286 gtatatttttctttgtttggttactcttatcttttttaataaaactaattaatgctatatatttggaaaactaaagtttgtttttttaaacaaa 40519193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 90 - 239
Target Start/End: Complemental strand, 37710560 - 37710407
Alignment:
Q  90 tatgatttatcaattatacactttgtcaattattctaatatttttc---aataaaactaattaatgctatatatttgaaaaactaaagtttgttgtttt- 185  Q
    ||||||||||||||||||| |||| ||||||| ||| || |||||    |||||||||||| ||| || | |||||  ||||||| ||||| || ||||     
T  37710560 tatgatttatcaattatactctttctcaattactcttattttttttttaaataaaactaataaatactctttatttttaaaactacagtttatttttttt 37710461  T
Q  186 aaacaaaatttgtttcttgttatcttcaaatttaaacaaaattttgttacctat 239  Q
    ||| ||| ||||||| ||| ||||||||||||||||||||||||| ||||||||    
T  37710460 aaataaagtttgttttttggtatcttcaaatttaaacaaaattttcttacctat 37710407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 788258 - 788204
Alignment:
Q  186 aaacaaaatttgtttcttgttatcttcaaatttaaacaaaattttgttacctatg 240  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  788258 aaacaaaatttatttcttgttatcttcaaatttaaacaaaattttgttacctatg 788204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 130 - 192
Target Start/End: Complemental strand, 23699484 - 23699422
Alignment:
Q  130 tttttcaataaaactaattaatgctatatatttgaaaaactaaagtttgttgttttaaacaaa 192  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||| || |||||||||||    
T  23699484 tttttcaataaaactaattaatgctatatatttggaaaactaaagtttcttcttttaaacaaa 23699422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 12 - 121
Target Start/End: Original strand, 30279925 - 30280034
Alignment:
Q  12 tccctccgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattatacact 111  Q
    |||||||||| ||||||||||||  ||||||||||||  ||| |||||||||||| |||  |||| ||||||| |||||  ||||| |||||||||| ||    
T  30279925 tccctccgtttctttttaagtgttgttttagggtgaactttttgttcctatttaactgtcattttagtattttaagggtgcgatttgtcaattataccct 30280024  T
Q  112 ttgtcaatta 121  Q
    ||||||||||    
T  30280025 ttgtcaatta 30280034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 9 - 121
Target Start/End: Original strand, 32768881 - 32768992
Alignment:
Q  9 tactccctccgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattatac 108  Q
    |||| ||||||||||||||||||| || ||||||||||||| ||| ||| |||||||| ||| || ||| |||||| |||||| ||||| ||||||||||    
T  32768881 tacttcctccgttcctttttaagtatcgttttagggtgaattttttgtt-ctatttaactgtcgtcttgatattttaagggtacgatttgtcaattatac 32768979  T
Q  109 actttgtcaatta 121  Q
     |||| |||||||    
T  32768980 tctttatcaatta 32768992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 15 - 121
Target Start/End: Complemental strand, 23699626 - 23699519
Alignment:
Q  15 ctccgttcctttttaagtgtctttttagggtgaatattt-cgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattatacacttt 113  Q
    |||||||||||||||||| || ||| ||||||||| ||| |||||||||||||  || ||||| ||||||| ||| || ||||| |||||||||| ||||    
T  23699626 ctccgttcctttttaagtttcgtttaagggtgaattttttcgttcctatttaacagtcgtttttgtattttaaggatacgatttgtcaattatacccttt 23699527  T
Q  114 gtcaatta 121  Q
    ||||||||    
T  23699526 gtcaatta 23699519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 94 - 185
Target Start/End: Complemental strand, 10101762 - 10101672
Alignment:
Q  94 atttatcaattatacactttgtcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagtttgttgtttt 185  Q
    |||| ||| |||||| |||| ||||||| ||| || |||||||||||||||||| |||||||| |||||| |||||||||||||||| ||||    
T  10101762 atttgtcacttataccctttctcaattactcttatctttttcaataaaactaat-aatgctatctatttggaaaactaaagtttgttttttt 10101672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 111 - 158
Target Start/End: Complemental strand, 21535892 - 21535845
Alignment:
Q  111 tttgtcaattattctaatatttttcaataaaactaattaatgctatat 158  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  21535892 tttgtcaattattcttatatttttcaataaaactaattaatgctatat 21535845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 81 - 151
Target Start/End: Original strand, 23698747 - 23698817
Alignment:
Q  81 ttttgagggtatgatttatcaattatacactttgtcaattattctaatatttttcaataaaactaattaat 151  Q
    |||| |||||||||||| |||||||||  |||||||||||| ||| |||||||| ||||||||||||||||    
T  23698747 ttttaagggtatgatttgtcaattatatcctttgtcaattactcttatatttttaaataaaactaattaat 23698817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 23699401 - 23699352
Alignment:
Q  186 aaacaaaatttgtttcttgttatcttcaaatttaaacaaaattttgttac 235  Q
    ||||||||| |||||||||||||||||| |||||||||||||||||||||    
T  23699401 aaacaaaatgtgtttcttgttatcttcagatttaaacaaaattttgttac 23699352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 80 - 192
Target Start/End: Original strand, 52281700 - 52281813
Alignment:
Q  80 attttgagggtatgatttatcaattatacactttgtcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagtttgt 179  Q
    ||||| ||||| |||||| ||| |||||  |||| |||| || ||  || ||||||||||||||||||||||| ||| ||||| ||||||||||||||||    
T  52281700 attttaagggtttgatttgtcacttatatcctttctcaactactcggatctttttcaataaaactaattaatgttatctatttaaaaaactaaagtttgt 52281799  T
Q  180 t-gttttaaacaaa 192  Q
    |  |||||||||||    
T  52281800 taattttaaacaaa 52281813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 132 - 180
Target Start/End: Original strand, 39157128 - 39157176
Alignment:
Q  132 tttcaataaaactaattaatgctatatatttgaaaaactaaagtttgtt 180  Q
    |||||||| |||||||||||| |||||||||||||||||||||||||||    
T  39157128 tttcaatagaactaattaatgttatatatttgaaaaactaaagtttgtt 39157176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 130 - 200
Target Start/End: Original strand, 19269741 - 19269812
Alignment:
Q  130 tttttcaataaaactaattaatgctatatatttgaaaaactaaagttt-gttgttttaaacaaaatttgttt 200  Q
    ||||||||||||| ||||||||  |||||||||| ||||| ||||||| ||| |||||||||||||||||||    
T  19269741 tttttcaataaaattaattaataatatatatttggaaaacaaaagtttggtttttttaaacaaaatttgttt 19269812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 179 - 234
Target Start/End: Complemental strand, 23697716 - 23697658
Alignment:
Q  179 ttgttttaaa--caaaatttgtttctt-gttatcttcaaatttaaacaaaattttgtta 234  Q
    ||||||||||  ||||||||||||||| |||||||||||||||||||||||||||||||    
T  23697716 ttgttttaaaaccaaaatttgtttctttgttatcttcaaatttaaacaaaattttgtta 23697658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 198 - 239
Target Start/End: Complemental strand, 1394828 - 1394787
Alignment:
Q  198 tttcttgttatcttcaaatttaaacaaaattttgttacctat 239  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  1394828 tttcttgttatcttaaaatttaaacaaaattttgttacctat 1394787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 66
Target Start/End: Original strand, 4671313 - 4671370
Alignment:
Q  9 tactccctccgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaa 66  Q
    ||||| |||||||| |||||||||||| ||||||||||||| ||| ||||||||||||    
T  4671313 tactctctccgttcatttttaagtgtcgttttagggtgaattttttgttcctatttaa 4671370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 60 - 152
Target Start/End: Complemental strand, 23697876 - 23697783
Alignment:
Q  60 tatttaaatgttgttttggtattttgagggtatgatttatcaattatacacttt-gtcaattattctaatatttttcaataaaactaattaatg 152  Q
    ||||||| ||||||||||||||| | |||||| ||||  ||||||||| | ||| |||||||||||| ||||||||  |||||||| |||||||    
T  23697876 tatttaattgttgttttggtattataagggtacgattcgtcaattatatattttggtcaattattcttatattttttgataaaactgattaatg 23697783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 136 - 192
Target Start/End: Original strand, 30280075 - 30280130
Alignment:
Q  136 aataaaactaattaatgctatatatttgaaaaactaaagtttgttgttttaaacaaa 192  Q
    ||||||||||||||||| | |||||||| |||||||||||||||| |||||||||||    
T  30280075 aataaaactaattaatgttgtatatttggaaaactaaagtttgtt-ttttaaacaaa 30280130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 182 - 240
Target Start/End: Complemental strand, 11238224 - 11238167
Alignment:
Q  182 ttttaaacaaaatttgtttcttgttatcttcaaatttaaacaaaattttgttacctatg 240  Q
    |||||||  |||||| |||||||| ||||||||||||||||||| ||||||||||||||    
T  11238224 ttttaaaacaaatttttttcttgt-atcttcaaatttaaacaaatttttgttacctatg 11238167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 54 - 180
Target Start/End: Complemental strand, 21967289 - 21967163
Alignment:
Q  54 cgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattatacactttgtcaattattctaatatttttcaataaaactaattaatgc 153  Q
    ||||| ||||||| ||| ||||||| ||||| |||||| ||||| ||| || |||  ||| | ||||| ||| || ||||||| |||||||||||||||     
T  21967289 cgttcttatttaactgtcgttttggcattttaagggtaagatttgtcacttgtaccatttcttaattactctcatctttttcattaaaactaattaatga 21967190  T
Q  154 tatatatttgaaaaactaaagtttgtt 180  Q
     || ||||| |||||| ||||| ||||    
T  21967189 catctattttaaaaacaaaagtatgtt 21967163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 239
Target Start/End: Original strand, 19269825 - 19269878
Alignment:
Q  186 aaacaaaatttgtttcttgttatcttcaaatttaaacaaaattttgttacctat 239  Q
    ||||||| |||| ||||||||||||||||||| ||||||| |||| ||||||||    
T  19269825 aaacaaagtttgcttcttgttatcttcaaattgaaacaaattttttttacctat 19269878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 40
Target Start/End: Original strand, 9361949 - 9361984
Alignment:
Q  5 atagtactccctccgttcctttttaagtgtcttttt 40  Q
    ||||||||||||||||||||||||||||||| ||||    
T  9361949 atagtactccctccgttcctttttaagtgtcatttt 9361984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 235
Target Start/End: Complemental strand, 11795848 - 11795765
Alignment:
Q  158 tatttgaaaaactaaagtttg-----ttgttttaaacaaaatttgtttcttgtt-atcttcaaatttaaacaaaattttgttac 235  Q
    ||||||||||| |||||||||     || ||||||| ||| ||| ||||||||| ||||| |||||||||||||||||||||||    
T  11795848 tatttgaaaaattaaagtttgttcgttttttttaaataaagtttatttcttgttaatcttaaaatttaaacaaaattttgttac 11795765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 40
Target Start/End: Complemental strand, 51974432 - 51974397
Alignment:
Q  5 atagtactccctccgttcctttttaagtgtcttttt 40  Q
    ||||||||||||||||||||||||||||||| ||||    
T  51974432 atagtactccctccgttcctttttaagtgtcatttt 51974397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 66
Target Start/End: Original strand, 15660567 - 15660624
Alignment:
Q  9 tactccctccgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaa 66  Q
    ||||| ||||||||||||||||||||| |||| ||   ||||||| ||||||||||||    
T  15660567 tactctctccgttcctttttaagtgtcatttttggagaaatattttgttcctatttaa 15660624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 196
Target Start/End: Original strand, 32186544 - 32186609
Alignment:
Q  131 ttttcaataaaactaattaatgctatatatttgaaaaactaaagtttgttgttttaaacaaaattt 196  Q
    |||| ||||||||||||||||| ||| |||||| |||| | |||||| || ||| |||||||||||    
T  32186544 tttttaataaaactaattaatgttatgtatttgcaaaattcaagtttattttttgaaacaaaattt 32186609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 42
Target Start/End: Complemental strand, 32769633 - 32769596
Alignment:
Q  5 atagtactccctccgttcctttttaagtgtctttttag 42  Q
    |||||||||||||| |||||||||||||||| ||||||    
T  32769633 atagtactccctccattcctttttaagtgtcgttttag 32769596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 35
Target Start/End: Original strand, 28678999 - 28679027
Alignment:
Q  7 agtactccctccgttcctttttaagtgtc 35  Q
    |||||||||||||||||||||||||||||    
T  28678999 agtactccctccgttcctttttaagtgtc 28679027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 133; Significance: 3e-69; HSPs: 53)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 9 - 234
Target Start/End: Original strand, 25496561 - 25496788
Alignment:
Q  9 tactccctccgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattatac 108  Q
    |||||||||| ||| ||||||||||||||||||| |||||| |||| ||||||||||| |||| ||||| |||||| |||||||||||||||||||||||    
T  25496561 tactccctccattcatttttaagtgtctttttagtgtgaatttttcattcctatttaactgtttttttgctattttaagggtatgatttatcaattatac 25496660  T
Q  109 actttgtcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagtttg--ttgttttaaacaaaatttgtttcttgtt 206  Q
     |||||| ||||| | | || ||||||||||||||||||||||||||| |||||||||||||||||||||  || |||||| |||| |||||||||| ||    
T  25496661 cctttgttaattacttttatctttttcaataaaactaattaatgctatctatttgaaaaactaaagtttgttttattttaagcaaagtttgtttcttatt 25496760  T
Q  207 atcttcaaatttaaacaaaattttgtta 234  Q
    ||||| ||||||||||||||||||||||    
T  25496761 atctttaaatttaaacaaaattttgtta 25496788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 9 - 231
Target Start/End: Original strand, 32233540 - 32233764
Alignment:
Q  9 tactccctccgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattatac 108  Q
    |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| |||  |||||||||||| ||||| |||||| ||||||||||    
T  32233540 tactcccttcgttcctttttaagtgtctttttagggtgaatttttcgttcctatttaactgtctttttggtattttaagggtgtgatttgtcaattatac 32233639  T
Q  109 actttgtcaattattctaatatttttcaataaaactaattaatgc-tatatatttgaaaaactaaag-tttgttgttttaaacaaaatttgtttcttgtt 206  Q
     |||||||||||| ||| || |||||||||||||||||||||||| ||| |||||| || ||||||| ||| || ||||||||||| ||||||| |||||    
T  32233640 cctttgtcaattactcttatctttttcaataaaactaattaatgcttatctatttggaacactaaagttttttttttttaaacaaagtttgtttattgtt 32233739  T
Q  207 atcttcaaatttaaacaaaattttg 231  Q
    ||||||||||||||| |||||||||    
T  32233740 atcttcaaatttaaataaaattttg 32233764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 9 - 200
Target Start/End: Complemental strand, 3443902 - 3443711
Alignment:
Q  9 tactccctccgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattatac 108  Q
    ||||||||||||||||||||||||||||||||||| ||||| |||| ||||||||||| ||| ||||||||||||| |||||||| ||| ||||||||||    
T  3443902 tactccctccgttcctttttaagtgtctttttaggatgaatttttcattcctatttaattgtcgttttggtattttaagggtatgttttgtcaattatac 3443803  T
Q  109 actttgtcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagtttgttgttttaaacaaaatttgttt 200  Q
     | ||| ||||| |||| || ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  3443802 ccgttgacaattgttcttatttttttcaatcaaactaattaatgctatatatttgaaaaactaaagtttgtttttttaaacaaagtttgttt 3443711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 13 - 237
Target Start/End: Original strand, 9455149 - 9455378
Alignment:
Q  13 ccctccgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgatttat-caattatacact 111  Q
    |||||| || ||||||||||||||||||||| ||||| ||| |||||||||||| ||| ||||||||||||| |  ||||||||| | |||||||||  |    
T  9455149 ccctccttttctttttaagtgtctttttaggttgaattttttgttcctatttaactgtcgttttggtattttaaatgtatgattttttcaattataccat 9455248  T
Q  112 ttgtcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagtttgtt------gttttaaacaaaatttgtttcttgt 205  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||      ||||||||  |||||  ||||||||    
T  9455249 ttgtcaattattcttatatttttcaataaaactaattaatgctatatatttgaaaaaataaagtttgtttgtttcgttttaaaacaaattattttcttgt 9455348  T
Q  206 tatcttcaaatttaaacaaaattttgttacct 237  Q
    |||||||||||||||||  |||||||||||||    
T  9455349 tatcttcaaatttaaac--aattttgttacct 9455378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 9 - 234
Target Start/End: Original strand, 25400382 - 25400608
Alignment:
Q  9 tactccctccgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattatac 108  Q
    |||||||||| |||||||||||||||||| |||| |||||| |||| ||||||||||| | || ||||| |||||| |||||||||||||||||||||||    
T  25400382 tactccctccattcctttttaagtgtcttcttagtgtgaatttttcattcctatttaactatttttttgctattttaagggtatgatttatcaattatac 25400481  T
Q  109 actttgtcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagtttg--ttgttttaaacaaaatttgtttcttgtt 206  Q
     |||||| ||||| | | ||  |||||||||||||||||||||||||| |||||| ||||||||||||||  || |||||| |||| |||||||||| ||    
T  25400482 cctttgttaattacttttatccttttcaataaaactaattaatgctatctatttggaaaactaaagtttgttttattttaagcaaagtttgtttcttatt 25400581  T
Q  207 atcttcaaatttaaacaaaattttgtta 234  Q
    ||||| |||||||||| |||||||||||    
T  25400582 atctttaaatttaaac-aaattttgtta 25400608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 51 - 200
Target Start/End: Complemental strand, 7578338 - 7578188
Alignment:
Q  51 tttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattatacactttgtcaattattctaatatttttcaataaaactaattaa 150  Q
    |||||||||||||||| ||| |||||| |||||| |||||||||| | |||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  7578338 tttcgttcctatttaactgtcgttttgatattttaagggtatgatctgtcaattataccctttgtcaattattcttatatttttcaataaaactaattaa 7578239  T
Q  151 tgctatatatttgaaaaactaaagtttg-ttgttttaaacaaaatttgttt 200  Q
    |||||||||||| ||||| ||||||||| || ||||||||||| |||||||    
T  7578238 tgctatatatttaaaaaattaaagtttgttttttttaaacaaagtttgttt 7578188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 9 - 188
Target Start/End: Original strand, 34146095 - 34146274
Alignment:
Q  9 tactccctccgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattatac 108  Q
    |||| ||| ||||| ||||||||||| |||||| ||||||| |||||||| ||||| | |||  |||||||||||| |||||| ||||| ||||||||||    
T  34146095 tacttccttcgttcatttttaagtgtttttttatggtgaatttttcgttcttatttgactgtctttttggtattttaagggtacgatttgtcaattatac 34146194  T
Q  109 actttgtcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagtttgttgttttaaa 188  Q
     |||||||||||| ||| || ||||||||||||||||||||||| | | |||||| |||||||||||||||| |||||||    
T  34146195 tctttgtcaattactcttatctttttcaataaaactaattaatgatgtctatttggaaaactaaagtttgtttttttaaa 34146274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 73 - 231
Target Start/End: Complemental strand, 1530703 - 1530546
Alignment:
Q  73 ttttggtattttgagggtatgatttatcaattatacactttgtcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaa 172  Q
    |||||||||||| |||||| ||||| ||||||||||| ||||||||||| ||| || ||||||||||||||| ||||||||||| |||||||||| ||||    
T  1530703 ttttggtattttaagggtacgatttgtcaattatacattttgtcaattactcttatttttttcaataaaactgattaatgctatctatttgaaaacctaa 1530604  T
Q  173 agtttgttgttttaaacaaaatttgtttcttgttatcttcaaatttaaacaaaattttg 231  Q
    ||||| || |||||| ||||  |||||||||||| |||||||||| |||||||||||||    
T  1530603 agttt-tttttttaatcaaagcttgtttcttgttttcttcaaattgaaacaaaattttg 1530546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 9 - 192
Target Start/End: Complemental strand, 2743094 - 2742927
Alignment:
Q  9 tactccctccgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattatac 108  Q
    |||||||||||||  ||||||||||| |||||||||||||| |||||||||||||||| ||||||||| ||||||| ||||||||||||               
T  2743094 tactccctccgtttttttttaagtgtttttttagggtgaatttttcgttcctatttaactgttgtttttgtattttaagggtatgattt----------- 2743006  T
Q  109 actttgtcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagtttgttgttttaaacaaa 192  Q
         |||||||||| | |||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  2743005 -----gtcaattatttttatatttttcaataaaactaattaatgctatatatttgaaaaattaaagtttgtttttttaaacaaa 2742927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 32 - 224
Target Start/End: Original strand, 27231709 - 27231905
Alignment:
Q  32 tgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattatacactttgtcaattattctaatatt 131  Q
    |||||||||| |  |||| ||||||| |||||||| |||  ||| ||| |||| | |||| |||||||||||||||| |||||| ||||||||| || ||    
T  27231709 tgtctttttatgaggaatttttcgttactatttaattgtc-tttgggtgttttaaaggtacgatttatcaattatactctttgttaattattcttatttt 27231807  T
Q  132 tttcaataaaactaattaatgctatatatttgaaaaactaaagtttgtt-----gttttaaacaaaatttgtttcttgttatcttcaaatttaaacaa 224  Q
    ||||||||||||||||||||||||| |||||| ||||||||||||||||      ||||||||||| |||||||||||||||||| ||||||||||||    
T  27231808 tttcaataaaactaattaatgctatctatttggaaaactaaagtttgttcgttctttttaaacaaagtttgtttcttgttatctttaaatttaaacaa 27231905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 9 - 185
Target Start/End: Original strand, 4418482 - 4418657
Alignment:
Q  9 tactccctccgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattatac 108  Q
    |||||||||||||| | |||||||||  ||| || | | || |  ||||| ||||||| ||| |||||||||||||||||||||||||| ||||||||||    
T  4418482 tactccctccgttcatatttaagtgttgtttgagtgcggatttaacgttcatatttaactgtcgttttggtattttgagggtatgatttgtcaattatac 4418581  T
Q  109 actttgtcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagtttgttgtttt 185  Q
     ||||||||||||  || || ||||| |||||||||||||||||||||||||||| |||||||||||| ||| ||||    
T  4418582 tctttgtcaattaccctcatcttttt-aataaaactaattaatgctatatatttggaaaactaaagttagttttttt 4418657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 9 - 233
Target Start/End: Original strand, 16393632 - 16393842
Alignment:
Q  9 tactccctccgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattatac 108  Q
    ||||| |||||||| ||||||||||||||||||| |||||| |||||||||||||||| |||  |||| ||||||| | |||| |||||               
T  16393632 tactctctccgttcatttttaagtgtctttttagagtgaatttttcgttcctatttaactgtcttttttgtattttaaaggtacgattt----------- 16393720  T
Q  109 actttgtcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagtttg--ttgttttaaacaaaatttgtttcttgtt 206  Q
         |||||||| | | |  ||||||||||||||||||||||||||| |||||| ||||||||||||||  || ||||||||||| ||| ||| |||||    
T  16393721 -----gtcaattacttttagctttttcaataaaactaattaatgctatctatttggaaaactaaagtttggttttttttaaacaaagtttattttttgtt 16393815  T
Q  207 atcttcaaatttaaacaaaattttgtt 233  Q
    |||||||||||||||||||||||||||    
T  16393816 atcttcaaatttaaacaaaattttgtt 16393842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 9 - 239
Target Start/End: Original strand, 34038819 - 34039034
Alignment:
Q  9 tactccctccgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattatac 108  Q
    |||||||||||||||||||||||| || |||||| |   || |||||||||||||||| ||| ||||| ||||||| |||| ||||||| |||||||||     
T  34038819 tactccctccgttcctttttaagtatcgttttagtgcagatttttcgttcctatttaactgtcgttttagtattttaagggcatgatttgtcaattata- 34038917  T
Q  109 actttgtcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagtttgttgtttt-aaacaaaatttgtttcttgtta 207  Q
      ||| ||             ||||||||||||| || |||||| ||||||||| ||||| ||||||||||| |||| ||||||| ||||||||||||||    
T  34038918 --tttatc-------------tttttcaataaaaatagttaatgttatatatttaaaaaattaaagtttgttttttttaaacaaagtttgtttcttgtta 34039002  T
Q  208 tcttcaaatttaaacaaaattttgttacctat 239  Q
    |||| ||||||||| |||||||||||||||||    
T  34039003 tcttaaaatttaaataaaattttgttacctat 34039034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 130 - 235
Target Start/End: Complemental strand, 29315922 - 29315816
Alignment:
Q  130 tttttcaataaaactaattaatgctatatatttgaaaaactaaagtttgttgttttaaa-caaaatttgtttcttgttatcttcaaatttaaacaaaatt 228  Q
    ||||| ||||||||||| |||||||||||||||| ||||||||||||| || ||||||| |||||||||||||||||||||| || ||||||||||||||    
T  29315922 ttttttaataaaactaagtaatgctatatatttggaaaactaaagtttttttttttaaaacaaaatttgtttcttgttatctacagatttaaacaaaatt 29315823  T
Q  229 ttgttac 235  Q
    |||||||    
T  29315822 ttgttac 29315816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 9 - 200
Target Start/End: Complemental strand, 1359082 - 1358897
Alignment:
Q  9 tactccctccgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattatac 108  Q
    ||||||||| ||||||||||||||||| || ||| | | || ||||||||||| |||| ||| |||||| |||||| |||||||||||| |||||||| |    
T  1359082 tactccctc-gttcctttttaagtgtcgttctagtgcggatttttcgttcctacttaactgtcgttttgatattttaagggtatgatttgtcaattatgc 1358984  T
Q  109 actttgtcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagtttgttgtttt-aaacaaaatttgttt 200  Q
     |||| ||||||| |||||| ||||||| |||||||||||||||      ||||||||||||||||||| || |||| ||||||| |||||||    
T  1358983 cctttatcaattactctaatctttttcattaaaactaattaatg------atttgaaaaactaaagtttatttttttaaaacaaagtttgttt 1358897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 53 - 200
Target Start/End: Complemental strand, 16599506 - 16599358
Alignment:
Q  53 tcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattatacactttgtcaattattctaatatttttcaataaaactaattaatg 152  Q
    |||||||||||||| ||||||||| ||||||| | ||||| |||| ||| ||||||  ||| ||||||| ||| || |||||||||||||||||||||||    
T  16599506 tcgttcctatttaactgttgttttagtattttaaaggtataatttgtcagttataccatttatcaattactcttatctttttcaataaaactaattaatg 16599407  T
Q  153 ctatatatttgaaaaactaaagttt-gttgttttaaacaaaatttgttt 200  Q
     |||||||||| |||||||||||||  || ||||||||||| |||||||    
T  16599406 atatatatttgtaaaactaaagtttattttttttaaacaaagtttgttt 16599358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 9 - 217
Target Start/End: Complemental strand, 41411636 - 41411430
Alignment:
Q  9 tactccctccgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattatac 108  Q
    |||| ||||||||| |||||||||||| ||| |  |||||| |  |||||||||||||  ||  ||||| |||||| ||| ||  |||||||||||||||    
T  41411636 tacttcctccgttcatttttaagtgtcgtttgaatgtgaatttagcgttcctatttaaccgtcattttgatattttaaggatacaatttatcaattatac 41411537  T
Q  109 actttgtcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagtttgttgttttaaacaaaatttgtttcttgttat 208  Q
     ||||||  |||| ||| || |||||||| |||||||||||| | |||| ||||||||||||||||||| || ||| ||||||| |||||||||||||||    
T  41411536 cctttgttgattactcttatctttttcaa-aaaactaattaaagttataaatttgaaaaactaaagttt-ttttttaaaacaaagtttgtttcttgttat 41411439  T
Q  209 cttcaaatt 217  Q
    ||| |||||    
T  41411438 ctttaaatt 41411430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 15 - 185
Target Start/End: Original strand, 14896547 - 14896717
Alignment:
Q  15 ctccgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattatacactttg 114  Q
    ||||||| ||||||||||||| |||||| | | || |  ||||||||||||| |||  |||||||||||| |||  ||||||| |||| ||||   ||||    
T  14896547 ctccgtttctttttaagtgtcgttttagtgcggatttaacgttcctatttaactgtcattttggtattttaaggtgatgatttgtcaaatatatcatttg 14896646  T
Q  115 tcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagtttgttgtttt 185  Q
    ||||||| ||| || ||||||||||||||||||||||| ||||||||| ||||||| ||||||||| ||||    
T  14896647 tcaattactcttatctttttcaataaaactaattaatgttatatatttaaaaaacttaagtttgttttttt 14896717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 9 - 121
Target Start/End: Complemental strand, 29316069 - 29315957
Alignment:
Q  9 tactccctccgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattatac 108  Q
    ||||||||||||||||||||||||||| ||||||||||||| |||  ||||||||||| ||| ||||| ||||||| || ||| ||||| ||||||||||    
T  29316069 tactccctccgttcctttttaagtgtcgttttagggtgaattttttattcctatttaactgtcgttttagtattttaagagtacgatttttcaattatac 29315970  T
Q  109 actttgtcaatta 121  Q
     ||||||||||||    
T  29315969 cctttgtcaatta 29315957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 9 - 208
Target Start/End: Original strand, 40557123 - 40557319
Alignment:
Q  9 tactccctccgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattatac 108  Q
    |||||| |||||||||||||||||||| ||| |  |||||| |  | |||||||||||  ||  ||||| |||||| ||| ||  |||||||||||||||    
T  40557123 tactccatccgttcctttttaagtgtcgtttgaatgtgaatttagctttcctatttaaccgtcattttgatattttaaggttacaatttatcaattatac 40557222  T
Q  109 actttgtcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagtttgttgttttaaacaaaatttgtttcttgttat 208  Q
     ||||||  |||| ||| || |||||||||||| |||||||||| |||| ||||||||||||||||||  || ||| ||||||| |||||||||||||||    
T  40557223 cctttgttgattactcttatctttttcaataaa-ctaattaatgttataaatttgaaaaactaaagtt--ttttttaaaacaaagtttgtttcttgttat 40557319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 20 - 214
Target Start/End: Original strand, 38401487 - 38401684
Alignment:
Q  20 ttcctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttt--tggtattttgagggtatgatttatcaattatacactttgtca 117  Q
    |||| ||||||||||||||||| | ||||| ||||||| ||||||||||||| |||  |  |||||| ||| ||| |||| |||||||||   |||||||    
T  38401487 ttccattttaagtgtctttttatgatgaatttttcgtttctatttaaatgttttttaattttattttaaggatataatttgtcaattatattatttgtca 38401586  T
Q  118 attattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagttt-gttgttttaaacaaaatttgtttcttgttatcttcaa 214  Q
    |||| ||| || ||||| ||||||| ||||||||| ||| |||||  |||| ||||||||  || |||||||||||  ||||||||||||||||||||    
T  38401587 attactcttatcttttttaataaaattaattaatgttatttatttcgaaaattaaagtttattttttttaaacaaagattgtttcttgttatcttcaa 38401684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 110 - 239
Target Start/End: Complemental strand, 4418957 - 4418831
Alignment:
Q  110 ctttgtcaattattctaatattttt-caataaaactaattaatgctatatatttgaaaaactaaagtttgttgttttaaacaaaatttgtttcttgttat 208  Q
    |||||||||||| ||| || ||||| ||||||||||||||||||    |||||||||||||  |||||| || |||||||| ||  ||||||||| ||||    
T  4418957 ctttgtcaattactcttattttttttcaataaaactaattaatg----atatttgaaaaacataagtttatttttttaaacgaagattgtttcttattat 4418862  T
Q  209 cttcaaatttaaacaaaattttgttacctat 239  Q
    |||||||||||||| ||| ||||||||||||    
T  4418861 cttcaaatttaaactaaactttgttacctat 4418831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 36 - 152
Target Start/End: Complemental strand, 30888010 - 30887895
Alignment:
Q  36 tttttagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattatacactttgtcaattattctaatatttttc 135  Q
    |||||| ||||||| |||||||||||||||| |||  ||||||| |||| ||||||  |||| |||||||||| |||||||||||| ||| || |||||     
T  30888010 tttttatggtgaatttttcgttcctatttaagtgtatttttggtgttttaagggtagaatttgtcaattatac-ctttgtcaattactcttatctttttt 30887912  T
Q  136 aataaaactaattaatg 152  Q
    |||||||||||||||||    
T  30887911 aataaaactaattaatg 30887895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 86 - 224
Target Start/End: Complemental strand, 39628386 - 39628238
Alignment:
Q  86 agggtatgatttatcaattatacactttg-tcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagtttgttgttt 184  Q
    |||||| ||||| ||||||||||  |||  ||||||| ||| || ||||||||||||||||||||||| ||| |||||| |||||||||||||||| |||    
T  39628386 agggtacgatttgtcaattatacctttttatcaattactcttatttttttcaataaaactaattaatgttatctatttggaaaactaaagtttgtttttt 39628287  T
Q  185 t---------aaacaaaatttgtttcttgttatcttcaaatttaaacaa 224  Q
    |         ||| ||| |||||||||||||||||||||||||||||||    
T  39628286 ttttttttgaaaaaaaagtttgtttcttgttatcttcaaatttaaacaa 39628238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 86 - 224
Target Start/End: Complemental strand, 39637936 - 39637788
Alignment:
Q  86 agggtatgatttatcaattatacactttg-tcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagtttgttgttt 184  Q
    |||||| ||||| ||||||||||  |||  ||||||| ||| || ||||||||||||||||||||||| ||| |||||| |||||||||||||||| |||    
T  39637936 agggtacgatttgtcaattatacctttttatcaattactcttatttttttcaataaaactaattaatgttatctatttggaaaactaaagtttgtttttt 39637837  T
Q  185 t---------aaacaaaatttgtttcttgttatcttcaaatttaaacaa 224  Q
    |         ||| ||| |||||||||||||||||||||||||||||||    
T  39637836 ttttttttgaaaaaaaagtttgtttcttgttatcttcaaatttaaacaa 39637788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 183 - 239
Target Start/End: Complemental strand, 1358890 - 1358834
Alignment:
Q  183 tttaaacaaaatttgtttcttgttatcttcaaatttaaacaaaattttgttacctat 239  Q
    |||||||||| |||||||||||||||||| |||||||||||||||||||||||||||    
T  1358890 tttaaacaaagtttgtttcttgttatcttaaaatttaaacaaaattttgttacctat 1358834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 3443699 - 3443645
Alignment:
Q  186 aaacaaaatttgtttcttgttatcttcaaatttaaacaaaattttgttacctatg 240  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||| |||||    
T  3443699 aaacaaaatttgtttcttgttatcttcaaatttaaaccaaattttgttatctatg 3443645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 111 - 177
Target Start/End: Original strand, 5870769 - 5870835
Alignment:
Q  111 tttgtcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagttt 177  Q
    ||||||||||||||| ||  |||||||||||||||||||||| ||| ||||||||||||||||||||    
T  5870769 tttgtcaattattcttatcattttcaataaaactaattaatgttatctatttgaaaaactaaagttt 5870835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 115 - 180
Target Start/End: Original strand, 38457289 - 38457354
Alignment:
Q  115 tcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagtttgtt 180  Q
    ||||||||| | || ||||||||||||||||||||||||||| |||||| ||||||||||||||||    
T  38457289 tcaattatttttatctttttcaataaaactaattaatgctatctatttggaaaactaaagtttgtt 38457354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 73 - 173
Target Start/End: Complemental strand, 7695403 - 7695303
Alignment:
Q  73 ttttggtattttgagggtatgatttatcaattatacactttgtcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaa 172  Q
    |||||||||||| |||||| ||||| |||||||||   ||| | ||||| ||| || |||||||||||||||| |||||| ||| |||||||||||||||    
T  7695403 ttttggtattttaagggtacgatttgtcaattatatcattttttaattactcttatctttttcaataaaactagttaatgttatctatttgaaaaactaa 7695304  T
Q  173 a 173  Q
    |    
T  7695303 a 7695303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 180 - 235
Target Start/End: Original strand, 3741741 - 3741796
Alignment:
Q  180 tgttttaaacaaaatttgtttcttgttatcttcaaatttaaacaaaattttgttac 235  Q
    ||||| |||||||||||||||||||||||||||| ||||||| |||||||||||||    
T  3741741 tgtttaaaacaaaatttgtttcttgttatcttcatatttaaagaaaattttgttac 3741796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 89 - 224
Target Start/End: Complemental strand, 1256821 - 1256683
Alignment:
Q  89 gtatgatttatcaattatacactttgtcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagtttgttg----ttt 184  Q
    ||||||||| |||||||| | |||||||||||| ||| || ||||  ||||||| |||||||||  || |||||  |||| |||||||| ||     |||    
T  1256821 gtatgatttgtcaattatgccctttgtcaattactcttatctttta-aataaaattaattaatgtcatctatttagaaaattaaagtttatttctttttt 1256723  T
Q  185 taaacaaaatttgtttcttgttatcttcaaatttaaacaa 224  Q
    |||||||| |||||||||||| ||||||||||||||||||    
T  1256722 taaacaaagtttgtttcttgtaatcttcaaatttaaacaa 1256683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 23 - 117
Target Start/End: Original strand, 3741536 - 3741629
Alignment:
Q  23 ctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattatacactttgtca 117  Q
    ||||||||||||| ||||||||||||| ||| |||||||||||| ||| ||||||||||||| |  ||| ||||| ||||||||||  |||||||    
T  3741536 ctttttaagtgtcgttttagggtgaattttttgttcctatttaactgtcgttttggtatttt-aaagtacgatttgtcaattataccatttgtca 3741629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 130 - 192
Target Start/End: Original strand, 3741668 - 3741730
Alignment:
Q  130 tttttcaataaaactaattaatgctatatatttgaaaaactaaagtttgttgttttaaacaaa 192  Q
    ||||| |||||||||||||||||||||||||||| |||||||||| || || |||||||||||    
T  3741668 ttttttaataaaactaattaatgctatatatttggaaaactaaagcttatttttttaaacaaa 3741730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 130 - 192
Target Start/End: Original strand, 36682591 - 36682652
Alignment:
Q  130 tttttcaataaaactaattaatgctatatatttgaaaaactaaagtttgttgttttaaacaaa 192  Q
    ||||| ||||||||||||||||| |||||||||||||||||||||||| || |||||||||||    
T  36682591 ttttttaataaaactaattaatg-tatatatttgaaaaactaaagtttatttttttaaacaaa 36682652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 182 - 234
Target Start/End: Original strand, 11087218 - 11087270
Alignment:
Q  182 ttttaaacaaaatttgtttcttgttatcttcaaatttaaacaaaattttgtta 234  Q
    |||||||||||  ||||||||| ||||||||||||||||||||||||||||||    
T  11087218 ttttaaacaaagcttgtttcttattatcttcaaatttaaacaaaattttgtta 11087270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 58 - 168
Target Start/End: Complemental strand, 43026814 - 43026703
Alignment:
Q  58 cctatttaaatgttgttttggtattttgagggtatgatttatcaattatacactttg-tcaattattctaatatttttcaataaaactaattaatgctat 156  Q
    ||||||||| ||| ||||| ||||||| | | || ||||| ||||||| ||  |||  ||||||||||| |||||||||||||||| ||||||||| ||     
T  43026814 cctatttaactgtcgttttagtattttaaagttacgatttgtcaattacacgtttttatcaattattcttatatttttcaataaaattaattaatgttac 43026715  T
Q  157 atatttgaaaaa 168  Q
    ||||||||||||    
T  43026714 atatttgaaaaa 43026703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 193 - 235
Target Start/End: Complemental strand, 7695258 - 7695216
Alignment:
Q  193 atttgtttcttgttatcttcaaatttaaacaaaattttgttac 235  Q
    ||||| |||||||||||||||||||||||||||||||||||||    
T  7695258 atttgcttcttgttatcttcaaatttaaacaaaattttgttac 7695216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 38457384 - 38457437
Alignment:
Q  182 ttttaaacaaaatttgtttcttgttatcttcaaatttaaacaaaattttgttac 235  Q
    ||||||||||| |||  |||||||||| ||||||||||||||||||||||||||    
T  38457384 ttttaaacaaagtttaattcttgttattttcaaatttaaacaaaattttgttac 38457437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 73 - 185
Target Start/End: Complemental strand, 45083135 - 45083023
Alignment:
Q  73 ttttggtattttgagggtatgatttatcaattatacactttgtcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaa 172  Q
    |||||||||||| | | |||||||| | |||||||  |||  | ||||| ||| || |||||||||||||||||||||||  || |||||| ||||||||    
T  45083135 ttttggtattttaaagatatgatttgttaattatattcttgtttaattactcttatctttttcaataaaactaattaatgtaatgtatttggaaaactaa 45083036  T
Q  173 agtttgttgtttt 185  Q
     ||||||| ||||    
T  45083035 cgtttgttttttt 45083023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 182 - 239
Target Start/End: Complemental strand, 16599341 - 16599283
Alignment:
Q  182 ttttaaacaaaa-tttgtttcttgttatcttcaaatttaaacaaaattttgttacctat 239  Q
    ||||||| |||| ||||||||  |||||||||||||||||| |||||||||||||||||    
T  16599341 ttttaaaaaaaagtttgtttcgagttatcttcaaatttaaataaaattttgttacctat 16599283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 66
Target Start/End: Complemental strand, 43553506 - 43553446
Alignment:
Q  6 tagtactccctccgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaa 66  Q
    ||||||||||||||||||||||||||||||| ||| ||   ||| ||| ||||||||||||    
T  43553506 tagtactccctccgttcctttttaagtgtctcttttggagaaattttttgttcctatttaa 43553446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 152
Target Start/End: Complemental strand, 44666310 - 44666214
Alignment:
Q  56 ttcctatttaaatgttgttttggtattttgagggtatgatttatcaattatacactttgtcaattattctaatatttttcaataaaactaattaatg 152  Q
    ||||||| ||| ||| | |||| |||||| || | ||||||| ||| |||||| |||| ||||||  ||| || |||||||||||||||||||||||    
T  44666310 ttcctatataattgtcgatttgatattttaagagcatgatttctcacttataccctttctcaatttctcttatctttttcaataaaactaattaatg 44666214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 182 - 229
Target Start/End: Original strand, 11384707 - 11384754
Alignment:
Q  182 ttttaaacaaaatttgtttcttgttatcttcaaatttaaacaaaattt 229  Q
    ||||||||||| ||||||| ||||||| | ||||||||||||||||||    
T  11384707 ttttaaacaaagtttgttttttgttatatgcaaatttaaacaaaattt 11384754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 42
Target Start/End: Complemental strand, 32234325 - 32234291
Alignment:
Q  8 gtactccctccgttcctttttaagtgtctttttag 42  Q
    ||||||||||||||||||||||||||| |||||||    
T  32234325 gtactccctccgttcctttttaagtgtttttttag 32234291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 224
Target Start/End: Original strand, 34146296 - 34146334
Alignment:
Q  186 aaacaaaatttgtttcttgttatcttcaaatttaaacaa 224  Q
    ||||||| | |||||||||||||||||||||||||||||    
T  34146296 aaacaaagtctgtttcttgttatcttcaaatttaaacaa 34146334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 42
Target Start/End: Complemental strand, 7695459 - 7695422
Alignment:
Q  5 atagtactccctccgttcctttttaagtgtctttttag 42  Q
    ||||||||||||||||||  ||||||||||||||||||    
T  7695459 atagtactccctccgttctattttaagtgtctttttag 7695422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 42
Target Start/End: Complemental strand, 27232309 - 27232276
Alignment:
Q  9 tactccctccgttcctttttaagtgtctttttag 42  Q
    |||||||||||||||||||||||||| |||||||    
T  27232309 tactccctccgttcctttttaagtgtttttttag 27232276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 66
Target Start/End: Complemental strand, 39303776 - 39303719
Alignment:
Q  9 tactccctccgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaa 66  Q
    ||||||||||||||||||||||||||| |||| ||   ||| ||| ||||||||||||    
T  39303776 tactccctccgttcctttttaagtgtcatttttggagaaattttttgttcctatttaa 39303719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 218
Target Start/End: Complemental strand, 7578172 - 7578144
Alignment:
Q  190 aaaatttgtttcttgttatcttcaaattt 218  Q
    |||||||||||||||||||||||||||||    
T  7578172 aaaatttgtttcttgttatcttcaaattt 7578144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 37
Target Start/End: Complemental strand, 11707741 - 11707713
Alignment:
Q  9 tactccctccgttcctttttaagtgtctt 37  Q
    |||||||||||||||||||||||||||||    
T  11707741 tactccctccgttcctttttaagtgtctt 11707713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 35
Target Start/End: Original strand, 14263518 - 14263550
Alignment:
Q  3 atatagtactccctccgttcctttttaagtgtc 35  Q
    |||| ||||||||||||||||||||||||||||    
T  14263518 atattgtactccctccgttcctttttaagtgtc 14263550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 194 - 230
Target Start/End: Complemental strand, 30887844 - 30887808
Alignment:
Q  194 tttgtttcttgttatcttcaaatttaaacaaaatttt 230  Q
    ||||||| |||||||||| ||||||||||||||||||    
T  30887844 tttgttttttgttatctttaaatttaaacaaaatttt 30887808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 128; Significance: 3e-66; HSPs: 71)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 9 - 235
Target Start/End: Complemental strand, 9089791 - 9089564
Alignment:
Q  9 tactccctccgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattatac 108  Q
    |||||| |||||| |||||||||||||||||||||||||   |||||||||||||||| |||| ||||||| |||| |||||| |||||||||||| |||    
T  9089791 tactccatccgtttctttttaagtgtctttttagggtgatattttcgttcctatttaactgtttttttggtgttttaagggtacgatttatcaattgtac 9089692  T
Q  109 actttgtcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaag-tttgttgttttaaacaaaatttgtttcttgtta 207  Q
     |||||||||||| ||| || ||||||||||||||||||||||||||| ||||||||||| ||||| ||| || ||||||||||  | ||||||||||||    
T  9089691 cctttgtcaattactcttatctttttcaataaaactaattaatgctatctatttgaaaaattaaagctttttttttttaaacaatgtatgtttcttgtta 9089592  T
Q  208 tcttcaaatttaaacaaaattttgttac 235  Q
    ||||||||||||||||||| ||||||||    
T  9089591 tcttcaaatttaaacaaaactttgttac 9089564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 20 - 225
Target Start/End: Complemental strand, 45635615 - 45635409
Alignment:
Q  20 ttcctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattatacactttgtcaat 119  Q
    ||||||||||||||||||   | ||||||| |||||||||||||||| ||  ||||||||||||| |||||| ||||||||||||||||  |||||||||    
T  45635615 ttcctttttaagtgtctt---aaggtgaatttttcgttcctatttaattgccgttttggtattttaagggtacgatttatcaattataccatttgtcaat 45635519  T
Q  120 tattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagtt----tgttgttttaaacaaaatttgtttcttgttatcttcaaa 215  Q
    || ||| |||||||||||||||||||||||||| |||||||||| ||||||||||||    | || ||| ||||||||||||||||||||||||||||||    
T  45635518 tactcttatatttttcaataaaactaattaatgttatatatttggaaaactaaagtttttattttttttaaaacaaaatttgtttcttgttatcttcaaa 45635419  T
Q  216 tttaaacaaa 225  Q
    ||||||||||    
T  45635418 tttaaacaaa 45635409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 6 - 177
Target Start/End: Complemental strand, 38434416 - 38434244
Alignment:
Q  6 tagtactccctccgttccttttt-aagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaatt 104  Q
    ||||||||||||||||  ||||| ||||||| ||||||||||||| |||||||||||||||| ||| ||||||||||||| | ||||| |||||||||||    
T  38434416 tagtactccctccgttttttttttaagtgtcgttttagggtgaatttttcgttcctatttaactgtcgttttggtattttaaaggtataatttatcaatt 38434317  T
Q  105 atacactttgtcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagttt 177  Q
    |||| |||| ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  38434316 ataccctttatcaattattcttatatttttcaataaaactaattagtgctatatatttgaaaaactaaagttt 38434244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 9 - 235
Target Start/End: Original strand, 50720811 - 50721039
Alignment:
Q  9 tactccctccgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattatac 108  Q
    |||||||||| ||||||||||| ||| |||||| ||||| | |||||||||||||||| |||  ||||||| |||| | | |||||| | ||||||||||    
T  50720811 tactccctccattcctttttaaatgtttttttaaggtgattttttcgttcctatttaactgtctttttggtgttttaaagatatgatgtgtcaattatac 50720910  T
Q  109 actttgtcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagtttgtt--gttttaaacaaaatttgtttcttgtt 206  Q
      ||||||||||| ||| || ||||||||||||||||||||||||||| |||||||||||| ||||||||||   ||||||||||| |||||||||| ||    
T  50720911 catttgtcaattactcttatctttttcaataaaactaattaatgctatctatttgaaaaacaaaagtttgtttatttttaaacaaagtttgtttcttatt 50721010  T
Q  207 atcttcaaatttaaacaaaattttgttac 235  Q
    |||||||||||||||||||| ||| ||||    
T  50721011 atcttcaaatttaaacaaaactttattac 50721039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 8 - 231
Target Start/End: Complemental strand, 54982932 - 54982705
Alignment:
Q  8 gtactccctccgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattata 107  Q
    |||||||||| ||||||||||||||||||||||||||||||| |||||||| ||||||| | |  ||||||||||||   ||||  |||| |||||||||    
T  54982932 gtactccctctgttcctttttaagtgtctttttagggtgaatttttcgttcatatttaactatctttttggtattttataggtacaatttgtcaattata 54982833  T
Q  108 cactttgtcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagtttg----ttgttttaaacaaaatttgtttctt 203  Q
    | |||||||||||| | | ||  |||||||||||||||| ||||||||| |||||| ||||||||||||||    |  ||||||||||| ||||||||||    
T  54982832 ctctttgtcaattacttttatccttttcaataaaactaactaatgctatctatttggaaaactaaagtttggttttctttttaaacaaagtttgtttctt 54982733  T
Q  204 gttatcttcaaatttaaacaaaattttg 231  Q
    |||||||||||||||| |||||||||||    
T  54982732 gttatcttcaaatttatacaaaattttg 54982705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 9 - 233
Target Start/End: Complemental strand, 38840593 - 38840364
Alignment:
Q  9 tactccctccgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattatac 108  Q
    |||||||||||||||||||||||| ||||||||  |||||| ||| |||||||||||| |||| ||||  |||||| ||||||  |||| |||||||||     
T  38840593 tactccctccgttcctttttaagtatctttttaaagtgaattttttgttcctatttaactgtttttttaatattttaagggtagaatttgtcaattatat 38840494  T
Q  109 actttgtcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagtttgttg-----ttttaaacaaaatttgtttctt 203  Q
     ||||| |||||| | | || ||||| | ||||||||||||||||||| |||||||||||||||||||||||      ||| ||||||| ||||||||||    
T  38840493 cctttgacaattacttttatcttttttagtaaaactaattaatgctatctatttgaaaaactaaagtttgtttgttattttaaaacaaagtttgtttctt 38840394  T
Q  204 gttatcttcaaatttaaacaaaattttgtt 233  Q
    ||||||||||||||||||||||||||||||    
T  38840393 gttatcttcaaatttaaacaaaattttgtt 38840364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 8 - 200
Target Start/End: Original strand, 46195657 - 46195849
Alignment:
Q  8 gtactccctccgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattata 107  Q
    |||||||||| ||||||||| ||||||||||||||||||||| ||| |||||||||||| |||  ||||||| |||  ||||||  |||| |||||||||    
T  46195657 gtactccctctgttccttttcaagtgtctttttagggtgaattttttgttcctatttaactgtctttttggtttttgaagggtacaatttgtcaattata 46195756  T
Q  108 cactttgtcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagtttgttgttttaaacaaaatttgttt 200  Q
    | |||||||||||| | | || ||||||| ||||||||||||||| |||  |||||||||| ||||||||||| ||||||||||| |||||||    
T  46195757 ccctttgtcaattacttttatctttttcagtaaaactaattaatgttatcaatttgaaaaattaaagtttgtttttttaaacaaagtttgttt 46195849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 13 - 200
Target Start/End: Complemental strand, 24538477 - 24538291
Alignment:
Q  13 ccctccgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattatacactt 112  Q
    |||||||||||||||||| |||  ||||||    || |||||||| |||||||| |||  |||||||||||| |||||||||||| ||||||| |  |||    
T  24538477 ccctccgttcctttttaaatgttgttttagaaaaaaaatttcgtttctatttaactgtcattttggtattttaagggtatgatttgtcaattacaacctt 24538378  T
Q  113 tgtcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagtttgttgttttaaacaaaatttgttt 200  Q
    ||||||||||||| ||||||||||||||||||||||| || |||||||||| |||||||||||||||| ||||||||||| |||||||    
T  24538377 tgtcaattattcttatatttttcaataaaactaattagtgttatatatttggaaaactaaagtttgtt-ttttaaacaaagtttgttt 24538291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 73 - 229
Target Start/End: Complemental strand, 37210097 - 37209934
Alignment:
Q  73 ttttggtattttgagggtatgatttatcaattatacactttgtcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaa 172  Q
    |||||||||||| ||||||| |||| |||||||||| |||||||||||||| | || |||||||||||||||||| |||||||| |||||| ||||||||    
T  37210097 ttttggtattttaagggtataatttgtcaattataccctttgtcaattatttttatctttttcaataaaactaatcaatgctatctatttggaaaactaa 37209998  T
Q  173 agtttgttgtttt-------aaacaaaatttgtttcttgttatcttcaaatttaaacaaaattt 229  Q
    |||||||| ||||       ||||||| ||||||||||||||||||||||||||||||||||||    
T  37209997 agtttgtttttttttttttaaaacaaagtttgtttcttgttatcttcaaatttaaacaaaattt 37209934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 9 - 200
Target Start/End: Complemental strand, 19443745 - 19443555
Alignment:
Q  9 tactccctccgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattatac 108  Q
    ||||||||||||| ||||| ||||||||||||| ||||||| |||||||||||||||| |||  |||||||||||| ||| || ||||| ||||||||||    
T  19443745 tactccctccgtttctttt-aagtgtctttttatggtgaatttttcgttcctatttaactgtctttttggtattttaaggatacgatttgtcaattatac 19443647  T
Q  109 actttgtcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagtttgttgttttaaacaaaatttgttt 200  Q
     |||||||||||| | | || ||||| | ||||||||| |||| |||| ||||||||||| ||||||||||| ||||||||| | |||||||    
T  19443646 cctttgtcaattacttttatcttttttagtaaaactaagtaatactatctatttgaaaaattaaagtttgtttttttaaacatagtttgttt 19443555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 9 - 169
Target Start/End: Original strand, 38045323 - 38045484
Alignment:
Q  9 tactccctccgttcctttttaagtgtctttttaggg-tgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattata 107  Q
    |||||| ||||||||||||||||||| ||||||||| ||||| ||||||||||||||||  ||  |||||||||||| |||||| |||||||||||||||    
T  38045323 tactccatccgttcctttttaagtgtgtttttaggggtgaatttttcgttcctatttaacagtctttttggtattttaagggtacgatttatcaattata 38045422  T
Q  108 cactttgtcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaac 169  Q
    | |||| ||||||| ||| |||| ||||||||||| ||||||||||||| |||||| |||||    
T  38045423 ccctttatcaattactcttatatctttcaataaaagtaattaatgctatctatttggaaaac 38045484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 9 - 185
Target Start/End: Original strand, 45666211 - 45666387
Alignment:
Q  9 tactccctccgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattatac 108  Q
    ||||||||||||| ||||||||||||||||||||| ||||| |||||||| ||||||| |||  |||||||||||| | |||| ||||| ||||||||||    
T  45666211 tactccctccgtttctttttaagtgtctttttaggatgaatttttcgttcatatttaactgtctttttggtattttaaaggtacgatttgtcaattatac 45666310  T
Q  109 actttgtcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagtttgttgtttt 185  Q
     |||||||||||| | | || ||||||||||||||| ||||||  ||| |||||| |||| ||||||||||| ||||    
T  45666311 cctttgtcaattacttttatctttttcaataaaacttattaataatatctatttggaaaattaaagtttgttttttt 45666387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 9 - 166
Target Start/End: Complemental strand, 24074288 - 24074131
Alignment:
Q  9 tactccctccgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattatac 108  Q
    ||||||||| ||| ||||||||||||||||||||||||||| |||||||||||||||| |||  |||| ||||||| ||| ||  |||| ||||||||||    
T  24074288 tactccctcagtttctttttaagtgtctttttagggtgaatttttcgttcctatttaattgtctttttagtattttaaggatactatttgtcaattatac 24074189  T
Q  109 actttgtcaattattctaatatttttcaataaaactaattaatgctatatatttgaaa 166  Q
     |||||||||||| ||| |  ||||||||||||||||||||||| ||| |||||||||    
T  24074188 cctttgtcaattactcttaactttttcaataaaactaattaatgttatctatttgaaa 24074131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 81 - 192
Target Start/End: Complemental strand, 37371509 - 37371399
Alignment:
Q  81 ttttgagggtatgatttatcaattatacactttgtcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagtttgtt 180  Q
    |||| ||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||| ||||||| |||||||||||||||| ||||||||||    
T  37371509 ttttaagggtatgatttatcaattataccctttgtcaattattcttatatttttcaataaaact-attaatgatatatatttgaaaaaccaaagtttgtt 37371411  T
Q  181 gttttaaacaaa 192  Q
     |||||||||||    
T  37371410 tttttaaacaaa 37371399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 117 - 235
Target Start/End: Original strand, 2492863 - 2492983
Alignment:
Q  117 aattattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagtttgttgttttaaa--caaaatttgtttcttgttatcttcaa 214  Q
    ||||| ||| || ||||| ||||||||||||||||||||| |||||||||||||||||||| || |||||||  |||||||||||| |||||||||||||    
T  2492863 aattactcttatcttttttaataaaactaattaatgctatctatttgaaaaactaaagtttatttttttaaaaacaaaatttgttttttgttatcttcaa 2492962  T
Q  215 atttaaacaaaattttgttac 235  Q
    |||||||||||||||||||||    
T  2492963 atttaaacaaaattttgttac 2492983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 18 - 156
Target Start/End: Original strand, 6949013 - 6949150
Alignment:
Q  18 cgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattatacactttgtca 117  Q
    ||||||||||||| |||||||||||||||||| |||||||| ||||||| |||  |||||||||||| || | | ||||| ||||||||||  |||||||    
T  6949013 cgttcctttttaaatgtctttttagggtgaat-tttcgttcttatttaactgtctttttggtattttaagtgcacgatttgtcaattataccatttgtca 6949111  T
Q  118 attattctaatatttttcaataaaactaattaatgctat 156  Q
    |||| ||| || |||||||||||||||||||||||||||    
T  6949112 attactcttatctttttcaataaaactaattaatgctat 6949150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 9 - 108
Target Start/End: Original strand, 17330740 - 17330839
Alignment:
Q  9 tactccctccgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattatac 108  Q
    |||||||||||||| |||||||||||||||||| ||||||| |||||||||||||||| |||  |||||||||||| |||||||||||| ||||||||||    
T  17330740 tactccctccgttcttttttaagtgtctttttatggtgaatttttcgttcctatttaactgtatttttggtattttaagggtatgatttgtcaattatac 17330839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 9 - 200
Target Start/End: Complemental strand, 49300037 - 49299850
Alignment:
Q  9 tactccctccgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattatac 108  Q
    ||||| ||||||||||||||||||| ||||||| ||| ||| ||||||| |||||||| |||  ||||| |||||| |||||| ||||| ||||||||||    
T  49300037 tactctctccgttcctttttaagtgactttttaaggtaaat-tttcgtttctatttaactgtctttttgttattttaagggtaggatttgtcaattatac 49299939  T
Q  109 actttgtcaatta-ttctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagtttgttgttttaaacaaaatttgttt 200  Q
     |||||| ||||| || || | |||||||||| ||||||| |||| ||| |||||||||||||| |||||    ||||||||||| |||||||    
T  49299938 cctttgttaattacttttattttttttcaatataactaatcaatgttatctatttgaaaaactacagttt----ttttaaacaaagtttgttt 49299850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 78 - 230
Target Start/End: Complemental strand, 34032105 - 34031954
Alignment:
Q  78 gtattttgagggtatgatttatcaattatacactttgtcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagttt 177  Q
    ||||||| |||||| ||||| |||||||||| |||||| ||||| | | || ||||||||||||||||||||||  ||| |||||  ||||||||||||     
T  34032105 gtattttaagggtacgatttgtcaattataccctttgttaattagttttatctttttcaataaaactaattaatattatctatttagaaaactaaagtt- 34032007  T
Q  178 gttgttttaaacaaaa-tttgtttcttgttatcttcaaatttaaacaaaatttt 230  Q
     || |||||||||||| ||||||||||||||| || ||||||||||||||||||    
T  34032006 -tttttttaaacaaaagtttgtttcttgttatttttaaatttaaacaaaatttt 34031954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 9 - 121
Target Start/End: Original strand, 33889488 - 33889599
Alignment:
Q  9 tactccctccgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattatac 108  Q
    ||||| ||||||||||||||||||||| ||||||||||||| ||| |||||||||||| ||||||||||||||||| ||||||  |||| ||||||||||    
T  33889488 tactctctccgttcctttttaagtgtcgttttagggtgaattttttgttcctatttaactgttgttttggtattttaagggtacaattt-tcaattatac 33889586  T
Q  109 actttgtcaatta 121  Q
     |||| |||||||    
T  33889587 tctttatcaatta 33889599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 130 - 225
Target Start/End: Original strand, 33889634 - 33889729
Alignment:
Q  130 tttttcaataaaactaattaatgctatatatttgaaaaactaaagtttgttgttttaaacaaaatttgtttcttgttatcttcaaatttaaacaaa 225  Q
    ||||| |||||||||||||||||||||||||||| ||||||||| ||| || ||  |||||||||||||||||||||||||||| |||||||||||    
T  33889634 ttttttaataaaactaattaatgctatatatttggaaaactaaaatttttttttaaaaacaaaatttgtttcttgttatcttcagatttaaacaaa 33889729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 72 - 213
Target Start/End: Original strand, 20782443 - 20782584
Alignment:
Q  72 gttttggtattttgagggtatgatttatcaattatacactttgtcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaacta 171  Q
    |||||| |||||| ||||||| |||| ||||||||||||||| ||||||| ||| ||||||||||||||||||||| |||||||  ||||| ||||||||    
T  20782443 gttttgatattttaagggtataatttttcaattatacactttctcaattactcttatatttttcaataaaactaataaatgctacctatttaaaaaacta 20782542  T
Q  172 aagtttgttgttttaaacaaaatttgtttcttgttatcttca 213  Q
    | ||||  | ||||| ||||| ||| ||| ||||| ||||||    
T  20782543 atgtttacttttttatacaaagtttcttttttgttttcttca 20782584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 9 - 234
Target Start/End: Original strand, 49262924 - 49263129
Alignment:
Q  9 tactccctccgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattatac 108  Q
    |||||||||||||||||||||| |||||||||||||||||| ||| |||||||||||| |||  |||||||| ||| ||  |||||||||              
T  49262924 tactccctccgttcctttttaaatgtctttttagggtgaattttttgttcctatttaactgtctttttggtaatttaagtatatgattta---------- 49263013  T
Q  109 actttgtcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagtttgttgttttaaacaaaa-tttgtttcttgtta 207  Q
          ||||||| ||| || ||||||||||||||||||||||| ||| |||||| ||    |||||||||  || |||| |||| |||||||||||| |    
T  49263014 ------tcaattactcttatctttttcaataaaactaattaatgatatctatttggaa---caaagtttgt--ttctaaagaaaactttgtttcttgtca 49263102  T
Q  208 tcttcaaatttaaacaaaattttgtta 234  Q
    |||||||||||||||||||||||||||    
T  49263103 tcttcaaatttaaacaaaattttgtta 49263129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 9 - 146
Target Start/End: Complemental strand, 21342380 - 21342249
Alignment:
Q  9 tactccctccgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattatac 108  Q
    |||||||||||||||||||||||||| |||||||| |||||      ||||||||||| |||  ||||| |||||| ||||||||||||||||||||||     
T  21342380 tactccctccgttcctttttaagtgtttttttaggatgaat------ttcctatttaactgtctttttgatattttaagggtatgatttatcaattatat 21342287  T
Q  109 actttgtcaattattctaatatttttcaataaaactaa 146  Q
      ||||| ||||| ||| || |||||||||||||||||    
T  21342286 catttgttaattactcttatctttttcaataaaactaa 21342249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 54 - 179
Target Start/End: Original strand, 23529471 - 23529597
Alignment:
Q  54 cgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattatacactttgtcaattattctaatatttt-tcaataaaactaattaatg 152  Q
    ||||||||||||| |||||||||| |||||| |||||| ||||| ||||||||||  ||| ||||||| | | || |||| |||||||||||||||||||    
T  23529471 cgttcctatttaactgttgttttgatattttaagggtacgatttgtcaattataccttttctcaattacttttatcttttttcaataaaactaattaatg 23529570  T
Q  153 ctatatatttgaaaaactaaagtttgt 179  Q
    |||| |||||| ||||||||| |||||    
T  23529571 ctatttatttggaaaactaaaatttgt 23529597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 130 - 218
Target Start/End: Complemental strand, 668083 - 667994
Alignment:
Q  130 tttttcaataaaactaattaatgctatatatttgaaaaactaaagtttgttgtttt-aaacaaaatttgtttcttgttatcttcaaattt 218  Q
    ||||| ||||||||||||||||| |||||||||| |||||||||||||||| |||| ||||||||||||||||||||| |||||| ||||    
T  668083 tttttaaataaaactaattaatgttatatatttggaaaactaaagtttgtttttttaaaacaaaatttgtttcttgttgtcttcagattt 667994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 9 - 121
Target Start/End: Complemental strand, 668230 - 668118
Alignment:
Q  9 tactccctccgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattatac 108  Q
    ||||||||||||||||||||||||||| ||||||||||||| ||| |||||||| ||| |||  |||| ||||||| |||| |  |||| ||||||||||    
T  668230 tactccctccgttcctttttaagtgtcgttttagggtgaattttttgttcctatctaactgtcttttttgtattttaagggcacaatttctcaattatac 668131  T
Q  109 actttgtcaatta 121  Q
     ||||||||||||    
T  668130 cctttgtcaatta 668118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 111 - 235
Target Start/End: Original strand, 25493839 - 25493973
Alignment:
Q  111 tttgtcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagtttgttgtt----------ttaaacaaaatttgttt 200  Q
    |||| |||||| ||| || ||||||||||||||||||||||| ||| |||||| |||||||||||||||| ||          | ||||||| |||||||    
T  25493839 tttgacaattactcttatctttttcaataaaactaattaatgttatctatttggaaaactaaagtttgtttttatttaaagaataaaacaaagtttgttt 25493938  T
Q  201 cttgttatcttcaaatttaaacaaaattttgttac 235  Q
    |||| ||||||||||||||||||||||||||||||    
T  25493939 cttggtatcttcaaatttaaacaaaattttgttac 25493973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 130 - 233
Target Start/End: Complemental strand, 47944511 - 47944408
Alignment:
Q  130 tttttcaataaaactaattaatgctatatatttgaaaaactaaagtttgttgtttt-aaacaaaatttgtttcttgttatcttcaaatttaaacaaaatt 228  Q
    ||||||||||||||| ||||||||||| |||||  |||| ||||||||||| |||| ||||||||||||| |||| ||||| | ||||||||||||||||    
T  47944511 tttttcaataaaacttattaatgctatctatttagaaaattaaagtttgtttttttaaaacaaaatttgtgtctttttatc-taaaatttaaacaaaatt 47944413  T
Q  229 ttgtt 233  Q
    |||||    
T  47944412 ttgtt 47944408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 59 - 185
Target Start/End: Complemental strand, 21956605 - 21956479
Alignment:
Q  59 ctatttaaatgttgttttggtattttgagggtatgatttatcaattatacactttgtcaattattctaatatttttcaataaaactaattaatgctatat 158  Q
    |||||||| | ||||||||||||||| |||||| ||||| ||| |||||   ||| |||| || ||| || ||||||||||||||||||||||  ||  |    
T  21956605 ctatttaattattgttttggtattttaagggtacgatttgtcacttatatcttttctcaaatactcttatctttttcaataaaactaattaatattacct 21956506  T
Q  159 atttgaaaaactaaagtttgttgtttt 185  Q
    |||||||||||||||||||||| ||||    
T  21956505 atttgaaaaactaaagtttgttatttt 21956479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 74 - 180
Target Start/End: Original strand, 25490439 - 25490545
Alignment:
Q  74 tttggtattttgagggtatgatttatcaattatacactttgtcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaa 173  Q
    ||||||||||| ||||||  |||| | ||||||||  ||||||||||| ||| ||  |||||||||||| ||||||||| |||||||||| |||||||||    
T  25490439 tttggtattttaagggtaaaatttgttaattataccatttgtcaattactcttatcattttcaataaaaataattaatgttatatatttggaaaactaaa 25490538  T
Q  174 gtttgtt 180  Q
    |||||||    
T  25490539 gtttgtt 25490545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 182 - 230
Target Start/End: Complemental strand, 19443549 - 19443501
Alignment:
Q  182 ttttaaacaaaatttgtttcttgttatcttcaaatttaaacaaaatttt 230  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  19443549 ttttaaacaaaatttgtttcttgttatcttcaaatttaaacaaaatttt 19443501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 182 - 233
Target Start/End: Complemental strand, 1821571 - 1821520
Alignment:
Q  182 ttttaaacaaaatttgtttcttgttatcttcaaatttaaacaaaattttgtt 233  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  1821571 ttttaaacaaaatttgtttattgttatcttcaaatttaaacaaaattttgtt 1821520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 179 - 240
Target Start/End: Complemental strand, 24538287 - 24538225
Alignment:
Q  179 ttgttttaaa-caaaatttgtttcttgttatcttcaaatttaaacaaaattttgttacctatg 240  Q
    |||||||||| |||||||||||||||||||||||| |||| ||||||||||||||||||||||    
T  24538287 ttgttttaaaacaaaatttgtttcttgttatcttcgaattcaaacaaaattttgttacctatg 24538225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 182 - 233
Target Start/End: Complemental strand, 49299843 - 49299792
Alignment:
Q  182 ttttaaacaaaatttgtttcttgttatcttcaaatttaaacaaaattttgtt 233  Q
    ||||||||||||||||||||||||||| |||||||||||| |||||||||||    
T  49299843 ttttaaacaaaatttgtttcttgttattttcaaatttaaagaaaattttgtt 49299792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 5 - 80
Target Start/End: Original strand, 53392558 - 53392632
Alignment:
Q  5 atagtactccctccgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggta 80  Q
    |||||||||| ||||||||||||||||||| |||||| ||||||| |||||||||||||||| |||  ||||||||    
T  53392558 atagtactccttccgttcctttttaagtgt-tttttatggtgaatttttcgttcctatttaactgtctttttggta 53392632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 129 - 235
Target Start/End: Original strand, 53393381 - 53393487
Alignment:
Q  129 atttttcaataaaactaattaatgctatatatttgaaaaactaaagtttgttgttttaaacaaaatttgtttcttgttatcttcaaatttaaacaaaatt 228  Q
    |||||| |||||||||||||||||| || |||||| || |  |    || || ||||||||||| ||||||||| |||||||| ||||||||||||||||    
T  53393381 atttttaaataaaactaattaatgccatctatttggaacaaaatttgttttttttttaaacaaagtttgtttctagttatctttaaatttaaacaaaatt 53393480  T
Q  229 ttgttac 235  Q
    |||||||    
T  53393481 ttgttac 53393487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 37371379 - 37371330
Alignment:
Q  186 aaacaaaatttgtttcttgttatcttcaaatttaaacaaaattttgttac 235  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||    
T  37371379 aaacaaaatttctttcttgttatcttcaaatttaaataaaattttgttac 37371330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 182 - 234
Target Start/End: Original strand, 6949219 - 6949271
Alignment:
Q  182 ttttaaacaaaatttgtttcttgttatcttcaaatttaaacaaaattttgtta 234  Q
    ||||||||||| |||||||||||||||||||||||| ||||||| ||||||||    
T  6949219 ttttaaacaaagtttgtttcttgttatcttcaaattgaaacaaatttttgtta 6949271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 179 - 239
Target Start/End: Complemental strand, 53370378 - 53370318
Alignment:
Q  179 ttgttttaaacaaaatttgtttcttgttatcttcaaatttaaacaaaattttgttacctat 239  Q
    |||||| ||||||| |||||||||| ||||||| |||||||||||||| ||||||||||||    
T  53370378 ttgtttaaaacaaagtttgtttcttattatcttaaaatttaaacaaaagtttgttacctat 53370318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 1821740 - 1821657
Alignment:
Q  14 cctccgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgattt 97  Q
    ||||||||| ||||||||||||| |||||||||||| |||||||  ||||||| | |  |||| ||||||| ||||||||||||    
T  1821740 cctccgttcttttttaagtgtctctttagggtgaatttttcgttgttatttaactatcttttttgtattttaagggtatgattt 1821657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 3 - 42
Target Start/End: Original strand, 19443026 - 19443065
Alignment:
Q  3 atatagtactccctccgttcctttttaagtgtctttttag 42  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  19443026 atatagtactccctccgttcctttttaagtgtctttttag 19443065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 130 - 189
Target Start/End: Original strand, 41502571 - 41502630
Alignment:
Q  130 tttttcaataaaactaattaatgctatatatttgaaaaactaaagtttgttgttttaaac 189  Q
    ||||| ||||||| ||||||||| |||||||||||||||||||||||| || ||||||||    
T  41502571 ttttttaataaaattaattaatgttatatatttgaaaaactaaagtttttttttttaaac 41502630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 182 - 233
Target Start/End: Original strand, 45666413 - 45666464
Alignment:
Q  182 ttttaaacaaaatttgtttcttgttatcttcaaatttaaacaaaattttgtt 233  Q
    ||||||||||| ||||||||||||||| || |||||||||||||||||||||    
T  45666413 ttttaaacaaagtttgtttcttgttattttgaaatttaaacaaaattttgtt 45666464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 194 - 233
Target Start/End: Original strand, 46195866 - 46195905
Alignment:
Q  194 tttgtttcttgttatcttcaaatttaaacaaaattttgtt 233  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  46195866 tttgtttcttgttatcttcaaatttaaacaaaattttgtt 46195905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 130 - 200
Target Start/End: Complemental strand, 1821644 - 1821574
Alignment:
Q  130 tttttcaataaaactaattaatgctatatatttgaaaaactaaagtttgttgttttaaacaaaatttgttt 200  Q
    ||||||| ||||||||||||||| ||| |||||| |||| |||||||| || ||||||||||| |||||||    
T  1821644 tttttcagtaaaactaattaatgatatctatttggaaaattaaagtttatttttttaaacaaagtttgttt 1821574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 186 - 240
Target Start/End: Original strand, 55343853 - 55343907
Alignment:
Q  186 aaacaaaatttgtttcttgttatcttcaaatttaaacaaaattttgttacctatg 240  Q
    |||||||||||||||| ||||||||| ||||||||||||| |||| |||||||||    
T  55343853 aaacaaaatttgtttcatgttatctttaaatttaaacaaattttttttacctatg 55343907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 239
Target Start/End: Original strand, 30913637 - 30913690
Alignment:
Q  186 aaacaaaatttgtttcttgttatcttcaaatttaaacaaaattttgttacctat 239  Q
    |||||||  ||||||||||||||||| ||||||||||||| |||||||||||||    
T  30913637 aaacaaagcttgtttcttgttatcttaaaatttaaacaaatttttgttacctat 30913690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 172 - 225
Target Start/End: Original strand, 41502632 - 41502685
Alignment:
Q  172 aagtttgttgttttaaacaaaatttgtttcttgttatcttcaaatttaaacaaa 225  Q
    |||||| || ||| |||||||||||||||||||||||||||| |||||||||||    
T  41502632 aagttttttttttaaaacaaaatttgtttcttgttatcttcagatttaaacaaa 41502685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 54 - 157
Target Start/End: Complemental strand, 46196926 - 46196822
Alignment:
Q  54 cgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattatacactttgtcaattattctaata-tttttcaataaaactaattaatg 152  Q
    |||| |||||||| ||| | ||| ||||||| |  ||||||||| ||||||| ||  ||||||||||| ||| ||| |||||||||||||||||||||||    
T  46196926 cgtttctatttaattgtcgctttagtattttaaaagtatgatttgtcaattacactatttgtcaattactcttatattttttcaataaaactaattaatg 46196827  T
Q  153 ctata 157  Q
     ||||    
T  46196826 ttata 46196822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 194 - 237
Target Start/End: Complemental strand, 8077972 - 8077929
Alignment:
Q  194 tttgtttcttgttatcttcaaatttaaacaaaattttgttacct 237  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||    
T  8077972 tttgtttcttgctatcttcaactttaaacaaaattttgttacct 8077929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 110 - 168
Target Start/End: Original strand, 33808886 - 33808944
Alignment:
Q  110 ctttgtcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaa 168  Q
    |||||| ||||| ||| | |||||||||||||| ||||||||| |||||||||||||||    
T  33808886 ctttgttaattactcttacatttttcaataaaattaattaatgttatatatttgaaaaa 33808944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 194 - 235
Target Start/End: Complemental strand, 24074125 - 24074084
Alignment:
Q  194 tttgtttcttgttatcttcaaatttaaacaaaattttgttac 235  Q
    ||||||| |||| |||||||||||||||||||||||||||||    
T  24074125 tttgttttttgtcatcttcaaatttaaacaaaattttgttac 24074084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 42
Target Start/End: Original strand, 37209530 - 37209563
Alignment:
Q  9 tactccctccgttcctttttaagtgtctttttag 42  Q
    ||||||||||||||||||||||||||||||||||    
T  37209530 tactccctccgttcctttttaagtgtctttttag 37209563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 42
Target Start/End: Original strand, 49299302 - 49299339
Alignment:
Q  5 atagtactccctccgttcctttttaagtgtctttttag 42  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  49299302 atagtactccctccgctcctttttaagtgtctttttag 49299339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 130 - 200
Target Start/End: Complemental strand, 53370477 - 53370405
Alignment:
Q  130 tttttcaataaaactaattaatgctatatatttgaaaaactaaagtttgttgtttt--aaacaaaatttgttt 200  Q
    |||||||||||| ||| ||||||||||||||||  ||||||||||||| || ||||  ||||||| |||||||    
T  53370477 tttttcaataaatctagttaatgctatatattttgaaaactaaagttttttttttttaaaacaaagtttgttt 53370405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 194 - 238
Target Start/End: Original strand, 30912718 - 30912762
Alignment:
Q  194 tttgtttcttgttatcttcaaatttaaacaaaattttgttaccta 238  Q
    |||||||||||||||||| |||||||||||||  |||||||||||    
T  30912718 tttgtttcttgttatcttaaaatttaaacaaatatttgttaccta 30912762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 177
Target Start/End: Original strand, 30913537 - 30913612
Alignment:
Q  101 aattatacactttgtcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagttt 177  Q
    |||||||| |||| ||||||| | || | ||||||||||||||||||||| | |||||||||  |||||||||||||    
T  30913537 aattataccctttatcaattacttta-tgtttttcaataaaactaattaacgttatatatttcgaaaactaaagttt 30913612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 66
Target Start/End: Complemental strand, 53600049 - 53599990
Alignment:
Q  7 agtactccctccgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaa 66  Q
    ||||||||||||||||||||||||||||| |||| ||   || |||| ||||||||||||    
T  53600049 agtactccctccgttcctttttaagtgtcatttttggagaaaaattttgttcctatttaa 53599990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 180
Target Start/End: Complemental strand, 29971580 - 29971530
Alignment:
Q  130 tttttcaataaaactaattaatgctatatatttgaaaaactaaagtttgtt 180  Q
    |||||| |||||| |||||||| |||| ||||||||||||| |||||||||    
T  29971580 tttttcgataaaattaattaatactatctatttgaaaaactcaagtttgtt 29971530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 197
Target Start/End: Complemental strand, 38044996 - 38044911
Alignment:
Q  111 tttgtcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagtttgttgttttaaacaaaatttg 197  Q
    ||||||||||  ||| |||||||||||||||| ||||||||  ||| ||||||  |||||||||||| || ||| ||||||| ||||    
T  38044996 tttgtcaatttctcttatatttttcaataaaattaattaatattatctatttg-gaaactaaagttttttttttaaaacaaagtttg 38044911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 206 - 236
Target Start/End: Complemental strand, 38434200 - 38434170
Alignment:
Q  206 tatcttcaaatttaaacaaaattttgttacc 236  Q
    |||||||||||||||||||||||||||||||    
T  38434200 tatcttcaaatttaaacaaaattttgttacc 38434170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 210
Target Start/End: Complemental strand, 46016662 - 46016561
Alignment:
Q  111 tttgtcaattattctaatatttttcaataaaactaattaatgctatatattt--gaaaaactaaagtttgttgttttaaacaaaatttgtttcttgttat 208  Q
    ||||| ||||| ||| || ||||||||| |||||||||||  |||||||| |  |  |||||||||||| || |   |||||||||||||||||||||||    
T  46016662 tttgttaattactcttatctttttcaatcaaactaattaaaactatatatatatggtaaactaaagttttttttaaaaaacaaaatttgtttcttgttat 46016563  T
Q  209 ct 210  Q
    ||    
T  46016562 ct 46016561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 36
Target Start/End: Complemental strand, 18135313 - 18135284
Alignment:
Q  7 agtactccctccgttcctttttaagtgtct 36  Q
    ||||||||||||||||||||||||||||||    
T  18135313 agtactccctccgttcctttttaagtgtct 18135284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 66
Target Start/End: Complemental strand, 38617568 - 38617511
Alignment:
Q  9 tactccctccgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaa 66  Q
    |||||||||||||||||||||||||||  ||| ||   ||||||| ||||||||||||    
T  38617568 tactccctccgttcctttttaagtgtcacttttggagaaatattttgttcctatttaa 38617511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 168
Target Start/End: Complemental strand, 42219092 - 42219055
Alignment:
Q  131 ttttcaataaaactaattaatgctatatatttgaaaaa 168  Q
    |||||||||||||||||||||| |||||||||| ||||    
T  42219092 ttttcaataaaactaattaatgttatatatttggaaaa 42219055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 36
Target Start/End: Complemental strand, 49122523 - 49122494
Alignment:
Q  7 agtactccctccgttcctttttaagtgtct 36  Q
    ||||||||||||||||||||||||||||||    
T  49122523 agtactccctccgttcctttttaagtgtct 49122494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 185
Target Start/End: Original strand, 2684696 - 2684763
Alignment:
Q  117 aattattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagtttgttgtttt 185  Q
    ||||| ||| || |||||||||||||| | | |||||||| |||||| |||||||||||||||| ||||    
T  2684696 aattactcttatctttttcaataaaacga-taaatgctatctatttggaaaactaaagtttgttatttt 2684763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 41
Target Start/End: Complemental strand, 33890239 - 33890207
Alignment:
Q  9 tactccctccgttcctttttaagtgtcttttta 41  Q
    ||||||||||||||||||||||||||| |||||    
T  33890239 tactccctccgttcctttttaagtgtcgtttta 33890207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 41
Target Start/End: Complemental strand, 37210151 - 37210119
Alignment:
Q  9 tactccctccgttcctttttaagtgtcttttta 41  Q
    |||| ||||||||||||||||||||||||||||    
T  37210151 tacttcctccgttcctttttaagtgtcttttta 37210119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 105
Target Start/End: Original strand, 41502441 - 41502536
Alignment:
Q  9 tactccctccgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaatta 105  Q
    |||||| |||||| ||||||||||||| ||||| ||| ||| ||| |||| ||||||| ||   |||||||||||| | |||| ||||| |||||||    
T  41502441 tactccatccgtttctttttaagtgtcattttaaggttaattttttgttcttatttaactg-cattttggtattttaatggtacgatttgtcaatta 41502536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 128; Significance: 3e-66; HSPs: 64)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 9 - 200
Target Start/End: Complemental strand, 25842109 - 25841918
Alignment:
Q  9 tactccctccgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattatac 108  Q
    ||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||  ||| |||| |||||||| |||||||||||| ||||| ||||    
T  25842109 tactccctccgttcctttttaagtgtcgttttagggtgaatttttcgttcctatttatctgtcgtttcggtattttaagggtatgatttgtcaatcatac 25842010  T
Q  109 actttgtcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagtttgttgttttaaacaaaatttgttt 200  Q
     |||||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||||| |||||| ||||||||||| |||||||    
T  25842009 cctttgtcaattaatcttatatttttcaataaaactaattaatgctatatatttggaaaactaaaatttgtttttttaaacaaagtttgttt 25841918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 12 - 233
Target Start/End: Original strand, 45646513 - 45646738
Alignment:
Q  12 tccctccgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattatacact 111  Q
    ||||||||||||||||||||||||||||||| |||||  |||||||||||||||| |||  |||||||||||| | |||| ||||| |||||||||| ||    
T  45646513 tccctccgttcctttttaagtgtctttttagagtgaaattttcgttcctatttaactgtctttttggtattttaaaggtacgatttgtcaattataccct 45646612  T
Q  112 ttgtcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaa----gtttgttgttttaaacaaaatttgtttcttgtta 207  Q
    |||||||||| | |  | ||||||||||||||||||||||||||| ||||||||||||||||    ||||||| ||||||||||| |||||||| |||||    
T  45646613 ttgtcaattacttttttctttttcaataaaactaattaatgctatctatttgaaaaactaaagtttgtttgtttttttaaacaaagtttgtttcctgtta 45646712  T
Q  208 tcttcaaatttaaacaaaattttgtt 233  Q
    ||| ||||||||||||||||||||||    
T  45646713 tctgcaaatttaaacaaaattttgtt 45646738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 3 - 235
Target Start/End: Original strand, 20841225 - 20841454
Alignment:
Q  3 atatagtactccctccgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaa 102  Q
    ||||| ||||||||||||||||||||||||||| ||||||||||||  ||| |||| ||||||| |||  |||||||||||| |||||| ||||| ||||    
T  20841225 atatattactccctccgttcctttttaagtgtcattttagggtgaaattttggttcttatttaactgtctttttggtattttaagggtacgatttgtcaa 20841324  T
Q  103 ttatacactttgtcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagtttgttgttttaaacaaaatttgtttct 202  Q
    ||||||  |||||||||||  || || ||||||||||||||||||||||||||| |||||||||||||||||| | || ||||||||||| |||||||||    
T  20841325 ttataccatttgtcaatta--cttatttttttcaataaaactaattaatgctatctatttgaaaaactaaagtat-tttttttaaacaaagtttgtttct 20841421  T
Q  203 tgttatcttcaaatttaaacaaaattttgttac 235  Q
    | ||||||| |||||||||||||||| ||||||    
T  20841422 tattatctttaaatttaaacaaaattgtgttac 20841454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 9 - 228
Target Start/End: Original strand, 34668592 - 34668812
Alignment:
Q  9 tactccctccgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattatac 108  Q
    |||||||| |||||||||||||||||||||||||||||||  |||||||||||||||| |||  |||| ||||||| || ||| ||||| ||||||||||    
T  34668592 tactcccttcgttcctttttaagtgtctttttagggtgaaattttcgttcctatttaactgtctttttagtattttaagtgtacgatttgtcaattatac 34668691  T
Q  109 actttgtcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagtttgttgtt-ttaaacaaaatttgtttcttgtta 207  Q
     |||||||||||| | |  | ||||| ||||||||||||||||||||| |||||| ||||||||||| |||| || ||||||||||||||||| ||||||    
T  34668692 cctttgtcaattacttttttttttttgaataaaactaattaatgctatctatttggaaaactaaagtatgtttttcttaaacaaaatttgttttttgtta 34668791  T
Q  208 tcttcaaatttaaacaaaatt 228  Q
    |||| ||||||||||||||||    
T  34668792 tctttaaatttaaacaaaatt 34668812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 7 - 234
Target Start/End: Original strand, 5493461 - 5493693
Alignment:
Q  7 agtactccctccgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattat 106  Q
    |||||||| || ||| |||||||||||| |||||| ||| | | |||||||||||||||| |||  |||||||||||| |||||| ||||| ||||||||    
T  5493461 agtactccttctgtttctttttaagtgtttttttaaggttattttttcgttcctatttaactgtctttttggtattttaagggtacgatttgtcaattat 5493560  T
Q  107 acactttgtcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagtttgttgtttt-----aaacaaaatttgtttc 201  Q
    || |||||||||||| ||| || ||||||||||||||||||||||| | | |||||||||||||||  ||| || ||||     ||||||| ||||||||    
T  5493561 accctttgtcaattactcttatctttttcaataaaactaattaatgttgtctatttgaaaaactaattttttttttttttttaaaaacaaagtttgtttc 5493660  T
Q  202 ttgttatcttcaaatttaaacaaaattttgtta 234  Q
    || ||||||||||||||||||||||||||||||    
T  5493661 ttattatcttcaaatttaaacaaaattttgtta 5493693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 9 - 167
Target Start/End: Complemental strand, 21959857 - 21959700
Alignment:
Q  9 tactccctccgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattatac 108  Q
    ||||||||||||| ||||||||||||| ||||||||||||||||| |||||||||||| ||| ||||||||||||| |||||||||||||||||||||||    
T  21959857 tactccctccgtttctttttaagtgtcgttttagggtgaatattttgttcctatttaactgtcgttttggtattttaagggtatgatttatcaattatac 21959758  T
Q  109 actttgtcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaa 167  Q
     |||||||||||||||| ||| |||||| |||||||||||| || ||||||||| ||||    
T  21959757 cctttgtcaattattcttata-ttttcattaaaactaattagtgttatatattttaaaa 21959700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 24 - 233
Target Start/End: Original strand, 2093701 - 2093920
Alignment:
Q  24 tttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattatacactttgtcaattatt 123  Q
    ||||||| |||||||||||||| ||| ||| |||||||||||| |||  ||||| |||||| |||||||||||| |||||||||| |||||||||||| |    
T  2093701 tttttaaatgtctttttagggtaaattttttgttcctatttaactgtctttttgatattttaagggtatgatttgtcaattataccctttgtcaattact 2093800  T
Q  124 ctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagtttgttgtttt----------aaacaaaatttgtttcttgttatcttca 213  Q
     | || ||||||| | ||| ||||||||||||| |||||||||||||||||||| || ||||          ||||||| ||||||||||||||||||||    
T  2093801 tttatctttttcagtcaaattaattaatgctatctatttgaaaaactaaagtttttttttttttttttttaaaaacaaagtttgtttcttgttatcttca 2093900  T
Q  214 aatttaaacaaaattttgtt 233  Q
    ||||||||| ||||||||||    
T  2093901 aatttaaactaaattttgtt 2093920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 9 - 180
Target Start/End: Complemental strand, 45760128 - 45759957
Alignment:
Q  9 tactccctccgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattatac 108  Q
    ||||||||||||||||||||||||||||||||| ||| ||| |||||||||||||||| |||  ||| |   |||| ||||||| |||| ||||||||||    
T  45760128 tactccctccgttcctttttaagtgtctttttatggtaaatttttcgttcctatttaactgtcttttagtgtttttaagggtatcatttgtcaattatac 45760029  T
Q  109 actttgtcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagtttgtt 180  Q
     |||||||||||| ||| || ||| ||||||||||||||||||||||| ||||||||||||||| |||||||    
T  45760028 cctttgtcaattactcttatctttctcaataaaactaattaatgctatctatttgaaaaactaatgtttgtt 45759957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 9 - 235
Target Start/End: Complemental strand, 37031141 - 37030921
Alignment:
Q  9 tactccctccgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattatac 108  Q
    |||| ||||||||| |||||||||||||||||| ||||||| || ||||||||||| | |||  |||||||||||| |   || ||||| ||||||||||    
T  37031141 tacttcctccgttcatttttaagtgtctttttatggtgaattttccgttcctattttactgtctttttggtattttaaat-tacgatttgtcaattatac 37031043  T
Q  109 actttgtcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagtttgttgttttaaacaaaatttgtttcttgttat 208  Q
     ||||| |||||| | | |  ||||||||||||||||||||||||||| |||||| || ||   ||||| ||  |||||||||| |||||||||||||||    
T  37031042 cctttgccaattacttttagctttttcaataaaactaattaatgctatctatttggaacac---agtttttt--tttaaacaaagtttgtttcttgttat 37030948  T
Q  209 cttcaaatttaaacaaaattttgttac 235  Q
    |||||||||||||||||||||||||||    
T  37030947 cttcaaatttaaacaaaattttgttac 37030921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 51 - 239
Target Start/End: Complemental strand, 15638618 - 15638431
Alignment:
Q  51 tttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattatacactttgtcaattattctaatatttttcaataaaactaattaa 150  Q
    |||||||||||||||||||||||||||||||||| || |||| |||| |||||||||| |||| ||||||| |||  | |||||| |||||||| |||||    
T  15638618 tttcgttcctatttaaatgttgttttggtattttaagagtattatttgtcaattataccctttatcaattaatct--tctttttccataaaacttattaa 15638521  T
Q  151 tgctatatatttgaaaaactaaagtttgttgtttt--aaacaaaatttgtttcttgttatcttcaaatttaaacaaaattttgttacctat 239  Q
    || | ||||||||  || | |||||||||| ||||  ||||||| |||||||||||||||||| ||||| |||||||||||||||||||||    
T  15638520 tgttttatatttg-caatcaaaagtttgtttttttaaaaacaaagtttgtttcttgttatcttaaaattcaaacaaaattttgttacctat 15638431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 9 - 200
Target Start/End: Original strand, 27817328 - 27817518
Alignment:
Q  9 tactccctccgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattatac 108  Q
    |||||||||||||| |||||||||||||||||| ||||||| ||||| ||||| |||| |||  |||||||||||| | |||| | ||| ||||||||||    
T  27817328 tactccctccgttcatttttaagtgtctttttaaggtgaatttttcg-tcctaattaactgtctttttggtattttaaaggtacggtttgtcaattatac 27817426  T
Q  109 actttgtcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagtttg-ttgttttaaacaaaatttgttt 200  Q
      ||||||||||||| | || |||||||||||||||||| ||| || | ||||||||||||||||||||| || ||||||||||| |||||||    
T  27817427 cttttgtcaattatt-ttatctttttcaataaaactaatgaattctctctatttgaaaaactaaagtttgttttttttaaacaaagtttgttt 27817518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 9 - 240
Target Start/End: Complemental strand, 7259864 - 7259631
Alignment:
Q  9 tactccctccgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattatac 108  Q
    |||||||||||||||||||||||||||||||||| |||||| ||| ||||||||||||  || |||||| |||||| |||||||||                  
T  7259864 tactccctccgttcctttttaagtgtctttttagagtgaattttttgttcctatttaaccgtcgttttgatattttaagggtatga-------------- 7259779  T
Q  109 actttgtcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaact---------------aaagtttg--ttgtttt-aaaca 190  Q
      ||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||               |||| |||  ||||||| |||||    
T  7259778 --tttgtcaattattcttatatttttcaataaaactaattaatgctatatatttggaaaactattttttttttaaacaaagcttgttttgttttaaaaca 7259681  T
Q  191 aaatttgtttcttgttatcttcaaatttaaacaaaattttgttacctatg 240  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  7259680 aaatttgtttcttattatcttcaaatttaaacaaaattttgttacctatg 7259631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 9 - 217
Target Start/End: Complemental strand, 54675356 - 54675151
Alignment:
Q  9 tactccctccgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattatac 108  Q
    ||||||||||||||||||||||||||| ||| |  |||||| |  |||||||||||||  ||  ||||| |||||| ||| ||  |||||||||||||||    
T  54675356 tactccctccgttcctttttaagtgtcgtttgaatgtgaatttagcgttcctatttaaccgtcattttgatattttaaggatacaatttatcaattatac 54675257  T
Q  109 actttgtcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagtttgttgttttaaacaaaatttgtttcttgttat 208  Q
     ||||||  |||| ||| || |||||||| |||||||||||||| |||| ||||||||||||||||||  || ||| ||||||| |||||||||||||||    
T  54675256 cctttgttgattactcttatctttttcaa-aaaactaattaatgttataaatttgaaaaactaaagtt--ttttttaaaacaaagtttgtttcttgttat 54675160  T
Q  209 cttcaaatt 217  Q
    ||| |||||    
T  54675159 ctttaaatt 54675151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 14 - 200
Target Start/End: Original strand, 9588660 - 9588847
Alignment:
Q  14 cctccgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattatacacttt 113  Q
    ||||||||  |||||||||||  |||||| | | ||||  | ||||||||||| |||  ||||| |||||| ||||||||||||||||||||||| ||||    
T  9588660 cctccgttattttttaagtgttgttttagtgcggatatagcattcctatttaactgtctttttgatattttaagggtatgatttatcaattatacccttt 9588759  T
Q  114 gtcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagtttg-ttgttttaaacaaaatttgttt 200  Q
    |||||||| |   || |||||||| |||||||||||||| |||||||||| |||||||||||||| || ||||||||||| |||||||    
T  9588760 gtcaattactaatatctttttcaaaaaaactaattaatgttatatatttggaaaactaaagtttgttttttttaaacaaagtttgttt 9588847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 9 - 168
Target Start/End: Complemental strand, 19234166 - 19234007
Alignment:
Q  9 tactccctccgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattatac 108  Q
    ||||||||||| ||||||||||||||| |||||| ||| || ||||||| ||||||||  || |||||| |||||| |  ||||||||| ||||||||||    
T  19234166 tactccctccgatcctttttaagtgtcgttttagtgtggatttttcgtttctatttaaccgtcgttttgatattttaaatgtatgatttttcaattatac 19234067  T
Q  109 actttgtcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaa 168  Q
     |||||||||||| ||| || |||||||||||||  ||||||||||||||||||| ||||    
T  19234066 cctttgtcaattactcttatctttttcaataaaaaaaattaatgctatatatttggaaaa 19234007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 16 - 188
Target Start/End: Original strand, 296351 - 296524
Alignment:
Q  16 tccgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattatacactttgt 115  Q
    |||||||||||||||||||| || ||| | | || || ||||||||||||| ||   |||||||||||| |||||||||||| ||| |||||| ||||||    
T  296351 tccgttcctttttaagtgtcgttctagtgcggattttacgttcctatttaactgacattttggtattttaagggtatgatttgtcagttataccctttgt 296450  T
Q  116 caattattctaat-atttttcaataaaactaattaatgctatatatttgaaaaactaaagtttgttgttttaaa 188  Q
    |||||| ||| ||  |||||| |||||||||||| |||||||||||||| ||||||||||||| || |||||||    
T  296451 caattactcttatcttttttctataaaactaatttatgctatatatttggaaaactaaagtttatttttttaaa 296524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 130 - 225
Target Start/End: Complemental strand, 44940921 - 44940825
Alignment:
Q  130 tttttcaataaaactaattaatgctatatatttgaaaaactaaagtttgttgtttt-aaacaaaatttgtttcttgttatcttcaaatttaaacaaa 225  Q
    ||||| ||||||||||||||||||||||||||||||||| ||||||||||| |||| ||||||||||||||||||||||| |||| |||||||||||    
T  44940921 ttttttaataaaactaattaatgctatatatttgaaaaattaaagtttgtttttttaaaacaaaatttgtttcttgttattttcagatttaaacaaa 44940825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 55 - 205
Target Start/End: Original strand, 19578288 - 19578440
Alignment:
Q  55 gttcctatttaaatgttgttttggtattttgagggtatgatttatcaattatacactttgtcaattattctaatatttttcaataaaactaattaatgct 154  Q
    |||||||||||| ||| ||||| ||||||| | |||| ||||| |||||||||| |||||||||||  |||  | ||||||||||||||||||||||| |    
T  19578288 gttcctatttaattgtcgttttagtattttaatggtacgatttgtcaattataccctttgtcaattgctcttgtctttttcaataaaactaattaatgtt 19578387  T
Q  155 atatatttgaaaaactaaagtttgttgtttt--aaacaaaatttgtttcttgt 205  Q
    ||||||||  ||||| |||||||||| ||||  ||||||| ||||||||||||    
T  19578388 atatatttagaaaacaaaagtttgttttttttaaaacaaagtttgtttcttgt 19578440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 9 - 186
Target Start/End: Original strand, 27264025 - 27264200
Alignment:
Q  9 tactccctccgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattatac 108  Q
    |||||||||||||||||||| ||||| |||||||| ||||| |||||||  ||||||| |||  ||||| ||| || ||| |||||||| ||||||||||    
T  27264025 tactccctccgttccttttttagtgtatttttaggatgaat-tttcgtttatatttaactgtctttttg-tatcttaaggatatgatttgtcaattatac 27264122  T
Q  109 actttgtcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagtttgttgtttta 186  Q
      ||||||||||| ||| || ||||||||||||| ||||||||||||| | |||| ||||  |||||||||| |||||    
T  27264123 catttgtcaattactcttatctttttcaataaaattaattaatgctatctttttggaaaaacaaagtttgttatttta 27264200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 51 - 239
Target Start/End: Original strand, 375698 - 375889
Alignment:
Q  51 tttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattatacactttgtcaattattctaatatttttcaataaaactaattaa 150  Q
    ||||||| ||||||||   | |||||| |||||| |  ||||||||| | |||||||   ||||||||||| ||| || ||||| ||||||| |||||||    
T  375698 tttcgtttctatttaaccatcgttttgatattttaaaagtatgatttgttaattatatcttttgtcaattactcttatcttttttaataaaattaattaa 375797  T
Q  151 tgct--atatatttgaaaaactaaagtttgttgtttt-aaacaaaatttgtttcttgttatcttcaaatttaaacaaaattttgttacctat 239  Q
    ||||  ||||||||| |||| |||| |||||| |||| ||||||| |||||||||||||||| | |||||| ||||||||||||||||||||    
T  375798 tgctttatatatttggaaaattaaattttgttttttttaaacaaagtttgtttcttgttatcctaaaattttaacaaaattttgttacctat 375889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 127 - 239
Target Start/End: Complemental strand, 23702003 - 23701887
Alignment:
Q  127 atatttttcaataaaactaattaatgctatatat--ttgaaaaactaaagtttgttgttttaaa--caaaatttgtttcttgttatcttcaaatttaaac 222  Q
    ||||||||||||||||||||| |||| |||||||  ||||||||||||||||| || |||||||  ||||||||||||  ||||||||| ||||||||||    
T  23702003 atatttttcaataaaactaataaatgttatatatatttgaaaaactaaagtttttttttttaaaaacaaaatttgtttaatgttatctttaaatttaaac 23701904  T
Q  223 aaaattttgttacctat 239  Q
    |||||||||||| ||||    
T  23701903 aaaattttgttatctat 23701887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 52 - 236
Target Start/End: Complemental strand, 2440781 - 2440602
Alignment:
Q  52 ttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattatacactttgtcaattattctaatatttttcaataaaactaattaat 151  Q
    |||||| |||||||| |||  ||||| |||||| | | |||||||| |||||||||| |||||||||||| | | || |||| |||||||| ||||||||    
T  2440781 ttcgtttctatttaagtgtc-ttttgatattttaaagatatgatttgtcaattataccctttgtcaattagttttatctttt-caataaaattaattaat 2440684  T
Q  152 gctatatatttgaaaaactaaagtttgttgttttaaacaaaatttgtttcttgttatcttcaaatttaaacaaaattttgttacc 236  Q
      |||||||||||||||||||||||  || ||||||||||| ||||||| ||||| | || |||||||||||||| |||||||||    
T  2440683 tatatatatttgaaaaactaaagtt--tttttttaaacaaagtttgtttgttgtt-ttttaaaatttaaacaaaagtttgttacc 2440602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 127 - 239
Target Start/End: Complemental strand, 23720459 - 23720342
Alignment:
Q  127 atatttttcaataaaactaattaatgctatatat--ttgaaaaactaaagtttgttgtttt---aaacaaaatttgtttcttgttatcttcaaatttaaa 221  Q
    ||||||||||||||||||||| |||| |||||||  ||||||||||||||||| || ||||   |||||||||||||||  ||||||||| |||||||||    
T  23720459 atatttttcaataaaactaataaatgttatatatatttgaaaaactaaagttttttttttttaaaaacaaaatttgtttaatgttatctttaaatttaaa 23720360  T
Q  222 caaaattttgttacctat 239  Q
    ||||||||||||| ||||    
T  23720359 caaaattttgttatctat 23720342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 127 - 239
Target Start/End: Complemental strand, 23738915 - 23738798
Alignment:
Q  127 atatttttcaataaaactaattaatgctatatat--ttgaaaaactaaagtttgttgtttt---aaacaaaatttgtttcttgttatcttcaaatttaaa 221  Q
    ||||||||||||||||||||| |||| |||||||  ||||||||||||||||| || ||||   |||||||||||||||  ||||||||| |||||||||    
T  23738915 atatttttcaataaaactaataaatgttatatatatttgaaaaactaaagttttttttttttaaaaacaaaatttgtttaatgttatctttaaatttaaa 23738816  T
Q  222 caaaattttgttacctat 239  Q
    ||||||||||||| ||||    
T  23738815 caaaattttgttatctat 23738798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 117 - 239
Target Start/End: Complemental strand, 23772312 - 23772183
Alignment:
Q  117 aattattctaatatttttcaataaaactaattaatgctatatat--ttgaaaaactaaagtttgttgtttt-----aaacaaaatttgtttcttgttatc 209  Q
    ||||| ||| ||||||||||||||||||||| |||| |||||||  ||||||||||||||||| || ||||     |||||||||||||||  |||||||    
T  23772312 aattactcttatatttttcaataaaactaataaatgttatatatatttgaaaaactaaagttttttttttttttaaaaacaaaatttgtttaatgttatc 23772213  T
Q  210 ttcaaatttaaacaaaattttgttacctat 239  Q
    || |||||||||||||||||||||| ||||    
T  23772212 tttaaatttaaacaaaattttgttatctat 23772183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 9 - 235
Target Start/End: Complemental strand, 16237747 - 16237538
Alignment:
Q  9 tactccctccgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattatac 108  Q
    |||||||||||||||||||||||||||||||||||   ||| |||||||||||||||| |||  |||||||||||| |  ||| |||||               
T  16237747 tactccctccgttcctttttaagtgtctttttaggaataatttttcgttcctatttaactgtctttttggtattttcatagtacgattt----------- 16237659  T
Q  109 actttgtcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagtttgttgttttaaacaaaatttgtttcttgttat 208  Q
         |||||||| | | ||||||||||||||| |||||||||||||| |||||| |||| | || ||| || ||||||||||| ||| ||| |||| ||    
T  16237658 -----gtcaattactattatatttttcaataaagctaattaatgctatctatttggaaaa-ttaattttttttttttaaacaaagttttttttttgtaat 16237565  T
Q  209 cttcaaatttaaacaaaattttgttac 235  Q
    ||||||||||||| |||| ||||||||    
T  16237564 cttcaaatttaaataaaactttgttac 16237538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 86 - 162
Target Start/End: Original strand, 1272413 - 1272489
Alignment:
Q  86 agggtatgatttatcaattatacactttgtcaattattctaatatttttcaataaaactaattaatgctatatattt 162  Q
    |||||||||||| |||| ||||| |||||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  1272413 agggtatgatttttcaactataccctttgtcaattactcttatatttttcaataaaactaattaatgctatatattt 1272489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 132 - 239
Target Start/End: Original strand, 3751492 - 3751607
Alignment:
Q  132 tttcaataaaactaattaatgctatatatttgaaaaactaaagtttgttgttttaaacaaaa--------tttgtttcttgttatcttcaaatttaaaca 223  Q
    ||||||||||||||||||||| |||||||||| ||| |||||||||||| || ||||||||         |||||||||||||||||| |||||||||||    
T  3751492 tttcaataaaactaattaatgttatatatttggaaacctaaagtttgtttttctaaacaaagaaacaaagtttgtttcttgttatctttaaatttaaaca 3751591  T
Q  224 aaattttgttacctat 239  Q
    ||||||| ||||||||    
T  3751592 aaattttcttacctat 3751607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 12 - 235
Target Start/End: Complemental strand, 38751268 - 38751037
Alignment:
Q  12 tccctccgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaatta------ 105  Q
    |||||||||||||||||||||||| ||||||||||||| ||| |||| |||||| |||| ||||| ||||||| || ||| ||||| |||||||          
T  38751268 tccctccgttcctttttaagtgtcgttttagggtgaattttttgttcttatttatatgtcgttttagtattttaagagtacgatttgtcaattactcgta 38751169  T
Q  106 ---tacactttg-tcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagtttgttgttttaaacaaaatttgtttc 201  Q
       | | ||||| |   ||| |||  | ||||| ||||||||||| |||||||||||||||| |||||||||         |||||||||||||||||||    
T  38751168 tctttctctttgtttggttactcttgtcttttttaataaaactaagtaatgctatatatttggaaaactaaa--aaaaaaatttaaacaaaatttgtttc 38751071  T
Q  202 ttgttatcttcaaatttaaacaaaattttgttac 235  Q
    ||||||||| || |||||||||||||||||||||    
T  38751070 ttgttatctacagatttaaacaaaattttgttac 38751037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 60 - 180
Target Start/End: Complemental strand, 19187789 - 19187669
Alignment:
Q  60 tatttaaatgttgttttggtattttgagggtatgatttatcaattatacactttgtcaattattctaatatttttcaataaaactaattaatgctatata 159  Q
    ||||||| ||| ||||| ||||||| || |||| |||| | |||||||| || |||| ||||  || || ||||||||||||||||||||||| ||||||    
T  19187789 tatttaattgtcgttttagtattttaagtgtataatttgtaaattatactctgtgtcgattacacttatttttttcaataaaactaattaatgatatata 19187690  T
Q  160 tttgaaaaactaaagtttgtt 180  Q
    ||||||||| |||||||||||    
T  19187689 tttgaaaaattaaagtttgtt 19187669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 99 - 203
Target Start/End: Original strand, 23272054 - 23272157
Alignment:
Q  99 tcaattatacactttgtcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagtttgttgttttaaacaaaatttgt 198  Q
    ||||||||||| ||| ||||||||||| || |||||||||||||| |||||||||||||||||| ||||| |||| ||| || | ||||||||| |||||    
T  23272054 tcaattatacattttctcaattattcttatctttttcaataaaacaaattaatgctatatatttaaaaaattaaaattt-ttttcttaaacaaagtttgt 23272152  T
Q  199 ttctt 203  Q
    |||||    
T  23272153 ttctt 23272157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 130 - 193
Target Start/End: Complemental strand, 21934537 - 21934474
Alignment:
Q  130 tttttcaataaaactaattaatgctatatatttgaaaaactaaagtttgttgttttaaacaaaa 193  Q
    ||||| |||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||    
T  21934537 ttttttaataaaactaattaatgctatatatttggaaaactaaagtttgtttttttaaacaaaa 21934474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 25 - 211
Target Start/End: Complemental strand, 25342537 - 25342350
Alignment:
Q  25 ttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattatacactttgtcaattattc 124  Q
    ||||||||||| ||| || ||| || |  ||||| |||||||  || ||||||||||||| | |||| ||||| |||||||||  |||||||||||| |     
T  25342537 ttttaagtgtcgtttgagtgtggatttaacgttcttatttaaccgtcgttttggtattttaaaggtacgatttgtcaattatatcctttgtcaattactt 25342438  T
Q  125 taatatttttcaataaaactaattaatgctatatatttgaaaaactaaagtt-tgttgttttaaacaaaatttgtttcttgttatctt 211  Q
    | ||  |||| ||||||||||||||||| |||||||||| ||||||||| || | || |||||||| || ||| ||| ||||||||||    
T  25342437 ttatcgtttttaataaaactaattaatgttatatatttggaaaactaaatttgtttttttttaaaccaagtttattttttgttatctt 25342350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 111 - 220
Target Start/End: Original strand, 45667468 - 45667578
Alignment:
Q  111 tttgtcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagtttg-ttgttttaaacaaaatttgtttcttgttatc 209  Q
    ||||||||||| | | || ||||||||||||| ||||||||||||| |||||| ||||| |||||||| || ||||||||||| |||| |||||||| ||    
T  45667468 tttgtcaattactttgatctttttcaataaaattaattaatgctatctatttggaaaacgaaagtttgttttttttaaacaaagtttgattcttgttttc 45667567  T
Q  210 ttcaaatttaa 220  Q
    || ||||||||    
T  45667568 ttaaaatttaa 45667578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 132 - 222
Target Start/End: Original strand, 15772305 - 15772393
Alignment:
Q  132 tttcaataaaactaattaatgctatatatttgaaaaactaaagtttgttgttttaaacaaaatttgtttcttgttatcttcaaatttaaac 222  Q
    ||||||||||||||||||||| ||| ||||||||||| |  |||||||| ||||||||||| |||||||||  |||||| |||||||||||    
T  15772305 tttcaataaaactaattaatgttatctatttgaaaaattcgagtttgtttttttaaacaaagtttgtttct--ttatctacaaatttaaac 15772393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 54 - 156
Target Start/End: Original strand, 1405182 - 1405284
Alignment:
Q  54 cgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattatacactttgtcaattattctaatatttttcaataaaactaattaatgc 153  Q
    ||||| |||||||||   ||||||||||||| | ||||  |||| ||||||||||  ||||||||||| |||||||||||| ||||| ||||||||||||    
T  1405182 cgttcttatttaaataccgttttggtattttaaaggtacaatttgtcaattataccatttgtcaattactctaatatttttaaataacactaattaatgc 1405281  T
Q  154 tat 156  Q
    |||    
T  1405282 tat 1405284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 9 - 90
Target Start/End: Complemental strand, 21934684 - 21934603
Alignment:
Q  9 tactccctccgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggt 90  Q
    ||||| ||||||| ||||||||||||| ||||||||||||| ||| |||||||||||| ||| ||||| ||||||| |||||    
T  21934684 tactctctccgtttctttttaagtgtcgttttagggtgaattttttgttcctatttaactgtcgttttagtattttaagggt 21934603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 21 - 121
Target Start/End: Complemental strand, 44941055 - 44940956
Alignment:
Q  21 tcctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattatacactttgtcaatt 120  Q
    ||||||||||||||| ||||||||||||| |||  |||||||||||   | ||||||||||||| |||||| ||||| |||||||||| |||| ||||||    
T  44941055 tcctttttaagtgtcgttttagggtgaattttta-ttcctatttaaccatcgttttggtattttaagggtacgatttttcaattataccctttatcaatt 44940957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 110 - 177
Target Start/End: Complemental strand, 633358 - 633291
Alignment:
Q  110 ctttgtcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagttt 177  Q
    |||||||||||| ||| ||  |||||||||||||||||||||| |||||||||| |||||||||||||    
T  633358 ctttgtcaattactcttatcattttcaataaaactaattaatgttatatatttggaaaactaaagttt 633291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 21959702 - 21959648
Alignment:
Q  186 aaacaaaatttgtttcttgttatcttcaaatttaaacaaaattttgttacctatg 240  Q
    |||||||||| |||| |||||||||||||||||||||||||| ||||||||||||    
T  21959702 aaacaaaattagtttattgttatcttcaaatttaaacaaaatgttgttacctatg 21959648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 2599144 - 2599197
Alignment:
Q  182 ttttaaacaaaatttgtttcttgttatcttcaaatttaaacaaaattttgttac 235  Q
    ||||||||||| |||||||||||||||||| |||||||||||||||| ||||||    
T  2599144 ttttaaacaaagtttgtttcttgttatctttaaatttaaacaaaattgtgttac 2599197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 88 - 177
Target Start/End: Complemental strand, 29556598 - 29556509
Alignment:
Q  88 ggtatgatttatcaattatacactttgtcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagttt 177  Q
    ||||| |||||||||||||||| ||| ||||||| ||| || |||||||||||||||||  |||| | | |||||||||||| |||||||    
T  29556598 ggtataatttatcaattatacaatttctcaattactcttatctttttcaataaaactaacaaatgttctctatttgaaaaacaaaagttt 29556509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 99 - 203
Target Start/End: Complemental strand, 20141095 - 20140992
Alignment:
Q  99 tcaattatacactttgtcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagtttgttgttttaaacaaaatttgt 198  Q
    ||||||||||  ||| ||||||| ||| || |||||||||||||| |||||||| ||| ||||| ||||| |||||||| || | ||||||||| |||||    
T  20141095 tcaattataccttttctcaattactcttatctttttcaataaaacaaattaatgttatgtatttaaaaaattaaagttt-ttttcttaaacaaagtttgt 20140997  T
Q  199 ttctt 203  Q
    |||||    
T  20140996 ttctt 20140992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 25841906 - 25841852
Alignment:
Q  186 aaacaaaatttgtttcttgttatcttcaaatttaaacaaaattttgttacctatg 240  Q
    ||||||||||||||| |||||||||||||||||||| |||| ||||||| |||||    
T  25841906 aaacaaaatttgttttttgttatcttcaaatttaaataaaactttgttatctatg 25841852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 42
Target Start/End: Complemental strand, 2599697 - 2599660
Alignment:
Q  5 atagtactccctccgttcctttttaagtgtctttttag 42  Q
    ||||||||||||||||||||||||||||||||||||||    
T  2599697 atagtactccctccgttcctttttaagtgtctttttag 2599660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 194 - 239
Target Start/End: Complemental strand, 6512551 - 6512506
Alignment:
Q  194 tttgtttcttgttatcttcaaatttaaacaaaattttgttacctat 239  Q
    |||||||||||||||| ||||||||| |||||||||||||||||||    
T  6512551 tttgtttcttgttatcctcaaatttatacaaaattttgttacctat 6512506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 194 - 239
Target Start/End: Original strand, 9588864 - 9588909
Alignment:
Q  194 tttgtttcttgttatcttcaaatttaaacaaaattttgttacctat 239  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||    
T  9588864 tttgtttcttgttatcttaaaatttaaacaaaactttgttacctat 9588909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 42
Target Start/End: Original strand, 16236972 - 16237009
Alignment:
Q  5 atagtactccctccgttcctttttaagtgtctttttag 42  Q
    ||||||||||||||||||||||||||||||||||||||    
T  16236972 atagtactccctccgttcctttttaagtgtctttttag 16237009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 186 - 234
Target Start/End: Original strand, 296546 - 296594
Alignment:
Q  186 aaacaaaatttgtttcttgttatcttcaaatttaaacaaaattttgtta 234  Q
    ||||||| || ||||||||||||||| ||||||||||||||||||||||    
T  296546 aaacaaatttcgtttcttgttatcttaaaatttaaacaaaattttgtta 296594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 9 - 105
Target Start/End: Original strand, 2598991 - 2599087
Alignment:
Q  9 tactccctccgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaatta 105  Q
    |||||||||||||| ||||||||| |||||||||| ||||  |||| || |||||||| | |  ||||| |||||| |||||| ||||| |||||||    
T  2598991 tactccctccgttcttttttaagtatctttttaggatgaaattttcatttctatttaactatctttttgatattttaagggtacgatttgtcaatta 2599087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 130 - 215
Target Start/End: Original strand, 25479620 - 25479709
Alignment:
Q  130 tttttcaataaaactaattaatgctatatatttgaaaaactaaagtttg----ttgttttaaacaaaatttgtttcttgttatcttcaaa 215  Q
    ||||||||| ||||||||||||| ||||||||||||||| | |||||||    |||||||| ||||| ||| ||| ||||||||| ||||    
T  25479620 tttttcaatcaaactaattaatgttatatatttgaaaaatttaagtttgttttttgttttatacaaagtttatttgttgttatctgcaaa 25479709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 25 - 105
Target Start/End: Original strand, 45667398 - 45667478
Alignment:
Q  25 ttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaatta 105  Q
    |||||||||||| ||||| || ||| |||||||||||||||| |||  |||| ||||||| ||| |||||||| |||||||    
T  45667398 ttttaagtgtctatttagagtaaatttttcgttcctatttaactgtctttttagtattttaaggttatgatttgtcaatta 45667478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 187 - 238
Target Start/End: Complemental strand, 6472726 - 6472675
Alignment:
Q  187 aacaaaatttgtttcttgttatcttcaaatttaaacaaaattttgttaccta 238  Q
    |||||| |||||||||||||||  ||||||||| ||||||||||||||||||    
T  6472726 aacaaagtttgtttcttgttattctcaaatttatacaaaattttgttaccta 6472675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 182 - 236
Target Start/End: Complemental strand, 42735610 - 42735556
Alignment:
Q  182 ttttaaacaaaatttgtttcttgttatcttcaaatttaaacaaaattttgttacc 236  Q
    ||||||||||| |||||| || |||||||| |||||||||||||| |||||||||    
T  42735610 ttttaaacaaagtttgttcctcgttatctttaaatttaaacaaaaatttgttacc 42735556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 188 - 231
Target Start/End: Original strand, 12568520 - 12568563
Alignment:
Q  188 acaaaatttgtttcttgttatcttcaaatttaaacaaaattttg 231  Q
    ||||| |||||||||| ||||||| |||||||||||||||||||    
T  12568520 acaaagtttgtttcttattatcttaaaatttaaacaaaattttg 12568563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 188 - 231
Target Start/End: Original strand, 13544984 - 13545027
Alignment:
Q  188 acaaaatttgtttcttgttatcttcaaatttaaacaaaattttg 231  Q
    ||||| |||||||||| ||||||| |||||||||||||||||||    
T  13544984 acaaagtttgtttcttattatcttaaaatttaaacaaaattttg 13545027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 94 - 180
Target Start/End: Complemental strand, 38416447 - 38416356
Alignment:
Q  94 atttatcaattatacactttgtcaattattc-----taatatttttcaataaaactaattaatgctatatatttgaaaaactaaagtttgtt 180  Q
    |||||||||||||||| ||| |||||||||      || ||||| ||||||||||||||||||| |||  |||||||||| | |||||||||    
T  38416447 atttatcaattatacattttctcaattattagtgtttattatttctcaataaaactaattaatgttatccatttgaaaaattcaagtttgtt 38416356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 239
Target Start/End: Original strand, 6749087 - 6749129
Alignment:
Q  197 gtttcttgttatcttcaaatttaaacaaaattttgttacctat 239  Q
    ||||||||||||| ||||||||| ||||||||||| |||||||    
T  6749087 gtttcttgttatcctcaaatttatacaaaattttgctacctat 6749129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 152
Target Start/End: Original strand, 10614555 - 10614653
Alignment:
Q  54 cgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattatacactttgtcaattattctaatatttttcaataaaactaattaatg 152  Q
    ||||| ||||||| ||| ||||||| |||||  ||||| ||||| ||| || |||  ||| ||||||| ||| || ||||||| |||||||||||||||    
T  10614555 cgttcttatttaactgtcgttttggcattttatgggtaagatttgtcacttgtaccatttctcaattactcttatctttttcattaaaactaattaatg 10614653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 229
Target Start/End: Complemental strand, 45759921 - 45759879
Alignment:
Q  187 aacaaaatttgtttcttgttatcttcaaatttaaacaaaattt 229  Q
    |||||| || ||||||||||||||| |||||||||||||||||    
T  45759921 aacaaagttcgtttcttgttatctttaaatttaaacaaaattt 45759879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 42
Target Start/End: Original strand, 7259285 - 7259318
Alignment:
Q  9 tactccctccgttcctttttaagtgtctttttag 42  Q
    ||||||||||||||||||||||||||| ||||||    
T  7259285 tactccctccgttcctttttaagtgtcgttttag 7259318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 35
Target Start/End: Original strand, 48214044 - 48214073
Alignment:
Q  6 tagtactccctccgttcctttttaagtgtc 35  Q
    ||||||||||||||||||||||||||||||    
T  48214044 tagtactccctccgttcctttttaagtgtc 48214073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 205 - 237
Target Start/End: Complemental strand, 29556498 - 29556466
Alignment:
Q  205 ttatcttcaaatttaaacaaaattttgttacct 237  Q
    |||| ||||||||||||||||||||||||||||    
T  29556498 ttattttcaaatttaaacaaaattttgttacct 29556466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 37
Target Start/End: Original strand, 46973400 - 46973428
Alignment:
Q  9 tactccctccgttcctttttaagtgtctt 37  Q
    |||||||||||||||||||||||||||||    
T  46973400 tactccctccgttcctttttaagtgtctt 46973428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 120; Significance: 2e-61; HSPs: 63)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 9 - 200
Target Start/End: Original strand, 27746379 - 27746570
Alignment:
Q  9 tactccctccgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattatac 108  Q
    |||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| ||| ||||||||||||| |||||||||||| ||||||||||    
T  27746379 tactccttccgttcctttttaagtgtctttttagggtgaatttttcgttcctatttaactgtcgttttggtattttaagggtatgatttgtcaattatac 27746478  T
Q  109 actttgtcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagtttgttgttttaaacaaaatttgttt 200  Q
      |||||  |||| | | ||||||||||||||||||||||||||||||||||||||||||||| ||||| || |||||||| || |||||||    
T  27746479 cttttgtttattacttttatatttttcaataaaactaattaatgctatatatttgaaaaactacagtttatttttttaaacgaagtttgttt 27746570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 9 - 200
Target Start/End: Complemental strand, 150455 - 150264
Alignment:
Q  9 tactccctccgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattatac 108  Q
    |||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| |||  |||||||||||| |||||| ||||  ||||||||||    
T  150455 tactccatccgttcctttttaagtgtctttttagggtgaatttttcgttcctatttaactgtctttttggtattttaagggtacgattcgtcaattatac 150356  T
Q  109 actttgtcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagtttg--ttgttttaaacaaaatttgttt 200  Q
     |||||||||||| |||  ||||||||||||||||||||||||| |||||||||||||||||||||||||  || ||||||||||| |||||||    
T  150355 cctttgtcaattactct--tatttttcaataaaactaattaatgttatatatttgaaaaactaaagtttgattttttttaaacaaattttgttt 150264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 13 - 229
Target Start/End: Original strand, 21252495 - 21252714
Alignment:
Q  13 ccctccgttcctttttaagtgtctttt-tagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattatacact 111  Q
    ||||||||||| ||||||||||||||| |||||||||| |||||||  ||||||| |||  ||||  |||||| |||||| ||||| |||||||||| ||    
T  21252495 ccctccgttccgttttaagtgtcttttttagggtgaatttttcgtttatatttaattgtctttttaatattttaagggtacgatttgtcaattatactct 21252594  T
Q  112 ttgtcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagtttgttgt--tttaaacaaaatttgtttcttgttatc 209  Q
    ||||||||||  || || ||||||||||||| ||||||||||||| |||||||||||||||||||| || |  ||||||||||||| |||||||||||||    
T  21252595 ttgtcaattacacttatctttttcaataaaattaattaatgctatctatttgaaaaactaaagtttatttttctttaaacaaaattagtttcttgttatc 21252694  T
Q  210 ttcaaatttaaacaaaattt 229  Q
    || |||||||||||||||||    
T  21252695 tttaaatttaaacaaaattt 21252714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 9 - 235
Target Start/End: Complemental strand, 16806728 - 16806503
Alignment:
Q  9 tactccctccgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattatac 108  Q
    ||||| || ||||||||||||||||| |||||||||||||| |||||||| ||||||| |||  ||||||||||||  || || ||||| ||||||||||    
T  16806728 tactctcttcgttcctttttaagtgtatttttagggtgaatttttcgttcttatttaactgtc-ttttggtattttagggataagatttgtcaattatac 16806630  T
Q  109 actttgtcaattattctaatatttttcaataaaa-ctaattaatgctatatatttgaaaaactaaagtttgttgttttaaacaaaatttgtttcttgtta 207  Q
     ||||||||||||  || ||||||||||| |||| |||||||||| | | |||||||||||||||||||  || |||||||||||||||| |||||||||    
T  16806629 cctttgtcaattacacttatatttttcaaaaaaaactaattaatgttgtctatttgaaaaactaaagttattt-ttttaaacaaaatttgattcttgtta 16806531  T
Q  208 tcttcaaatttaaacaaaattttgttac 235  Q
    || |||||||||||||||||||||||||    
T  16806530 tcctcaaatttaaacaaaattttgttac 16806503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 9 - 235
Target Start/End: Complemental strand, 16846009 - 16845784
Alignment:
Q  9 tactccctccgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattatac 108  Q
    ||||| || ||||||||||||||||| |||||||||||||| |||||||| ||||||| |||  ||||||||||||  || || ||||| ||||||||||    
T  16846009 tactctcttcgttcctttttaagtgtatttttagggtgaatttttcgttcttatttaactgtc-ttttggtattttagggataagatttgtcaattatac 16845911  T
Q  109 actttgtcaattattctaatatttttcaataaaa-ctaattaatgctatatatttgaaaaactaaagtttgttgttttaaacaaaatttgtttcttgtta 207  Q
     ||||||||||||  || ||||||||||| |||| |||||||||| | | |||||||||||||||||||  || |||||||||||||||| |||||||||    
T  16845910 cctttgtcaattacacttatatttttcaaaaaaaactaattaatgttgtctatttgaaaaactaaagttattt-ttttaaacaaaatttgattcttgtta 16845812  T
Q  208 tcttcaaatttaaacaaaattttgttac 235  Q
    || |||||||||||||||||||||||||    
T  16845811 tcctcaaatttaaacaaaattttgttac 16845784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 10 - 200
Target Start/End: Complemental strand, 4959558 - 4959369
Alignment:
Q  10 actccctccgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattataca 109  Q
    |||||||||||| ||||||||||||||||||||||| ||| |||||||||||||||| | | ||||||||||||| |||||||||||| ||||||||||     
T  4959558 actccctccgtttctttttaagtgtctttttagggtaaatttttcgttcctatttaactatcgttttggtattttaagggtatgatttgtcaattatacc 4959459  T
Q  110 ctttgtcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagtttgttgttttaaacaaaatttgttt 200  Q
     ||||||||| ||||| ||| |||| ||||||| |||||||||||||||||||| | |||||||| ||||| ||||||||||| |||||||    
T  4959458 gtttgtcaatcattcttatagtttttaataaaattaattaatgctatatatttggataactaaag-ttgtttttttaaacaaagtttgttt 4959369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 9 - 200
Target Start/End: Complemental strand, 25966051 - 25965860
Alignment:
Q  9 tactccctccgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattatac 108  Q
    |||||||||||||||||||||| |||||||||||||||||| |||| ||||||||||| | | ||||||||||||| |||||| ||||| |||| |||||    
T  25966051 tactccctccgttcctttttaaatgtctttttagggtgaatttttcattcctatttaactatcgttttggtattttaagggtacgatttgtcaactatac 25965952  T
Q  109 actttgtcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagtttgttgttttaaacaaaatttgttt 200  Q
     |||||||||||| ||| |||||||||||||||||| ||||    |||||||||||||||||||||||| || | ||||||||| |||||||    
T  25965951 cctttgtcaattactcttatatttttcaataaaactcattatcattatatatttgaaaaactaaagtttattttcttaaacaaagtttgttt 25965860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 9 - 239
Target Start/End: Original strand, 15507363 - 15507597
Alignment:
Q  9 tactccctccgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattatac 108  Q
    ||||||||||||||||||| ||||||| |||||| ||| || |||  || |||||||| ||| | ||||||||||  |||||||||||| ||||||||||    
T  15507363 tactccctccgttccttttcaagtgtcgttttagtgtgtattttttatttctatttaactgtcgatttggtattta-agggtatgatttgtcaattatac 15507461  T
Q  109 actttgtcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagtttgtt------gttttaaacaaaatttgtttct 202  Q
     |||||||||||| ||| || |||||||||||| ||||||||||||||||| ||||||||||||||||||||       ||| ||||||| ||||||| |    
T  15507462 cctttgtcaattactcttatctttttcaataaa-ctaattaatgctatataattgaaaaactaaagtttgtttgtttcttttaaaacaaagtttgttttt 15507560  T
Q  203 tgttatcttcaaatttaaacaaaattttgttacctat 239  Q
    ||||||||| ||||| ||||||||||||| |||||||    
T  15507561 tgttatcttaaaattcaaacaaaattttgctacctat 15507597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 9 - 235
Target Start/End: Complemental strand, 38589479 - 38589249
Alignment:
Q  9 tactccctccgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattatac 108  Q
    |||||| ||||||||||||||||||| |||||| ||||||| |||||||||||||||| ||   |||||||||||| | |||| ||||||||||||||||    
T  38589479 tactccatccgttcctttttaagtgtttttttatggtgaatttttcgttcctatttaactgccattttggtattttaaaggtacgatttatcaattatac 38589380  T
Q  109 actttgtcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaa----gtttgttgttttaaacaaaatttgtttcttg 204  Q
      ||||||||||| | | || |||||||||||||  |||||||||||| |||||  |||||||||    |||| || |||||| |||| |||| |||||     
T  38589379 catttgtcaattacttttatctttttcaataaaatcaattaatgctatctatttagaaaactaaaacttgtttttttttttaaccaaagtttgcttcttt 38589280  T
Q  205 ttatcttcaaatttaaacaaaattttgttac 235  Q
    ||||||||| |||||||||||||||||||||    
T  38589279 ttatcttcacatttaaacaaaattttgttac 38589249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 72 - 239
Target Start/End: Original strand, 44898085 - 44898256
Alignment:
Q  72 gttttggtattttgagggtatgatttatcaattatacactttgtcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaacta 171  Q
    ||||| ||||||| | |||| ||||| |||||||||| |||||||||||| ||| || ||||||||||||||||||||||| ||||||||||||||||||    
T  44898085 gttttagtattttaaaggtacgatttttcaattataccctttgtcaattactcttatctttttcaataaaactaattaatgttatatatttgaaaaacta 44898184  T
Q  172 aa----gtttgttgttttaaacaaaatttgtttcttgttatcttcaaatttaaacaaaattttgttacctat 239  Q
    ||    ||||||| ||||||||||| |  |||||||||||||||||||||||||||||||||| ||||||||    
T  44898185 aagttggtttgtttttttaaacaaagtgcgtttcttgttatcttcaaatttaaacaaaattttattacctat 44898256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 14 - 230
Target Start/End: Complemental strand, 20171612 - 20171395
Alignment:
Q  14 cctccgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattatacacttt 113  Q
    |||| |||| |||||||||||| || | | |||||| ||||||| |||||||| ||| |||| | ||||||||| | |||| || |||||||||| ||||    
T  20171612 cctctgttcttttttaagtgtcgttcttgtgtgaatttttcgtttctatttaactgtcgtttcgctattttgagagcatgagttgtcaattatacccttt 20171513  T
Q  114 gtcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagtttgtt-gttttaaacaaaatttgtttcttgttatcttc 212  Q
    |||||||| ||| || ||||||||||||||||||||||| |||||||||| ||||||||||||||||  ||||||||||| |||| |||||||||| ||     
T  20171512 gtcaattactcttatctttttcaataaaactaattaatgttatatatttggaaaactaaagtttgttatttttaaacaaagtttggttcttgttatgtta 20171413  T
Q  213 aaatttaaacaaaatttt 230  Q
    |||| |||||||| ||||    
T  20171412 aaatataaacaaattttt 20171395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 20 - 192
Target Start/End: Complemental strand, 34424943 - 34424771
Alignment:
Q  20 ttcctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattatacactttgtcaat 119  Q
    |||||||||||||||||||||||||||||| |||||||| ||||||||||| ||||| ||||||| ||| ||| |||| ||||||| || ||||||| ||    
T  34424943 ttcctttttaagtgtctttttagggtgaatttttcgttcatatttaaatgtcgtttttgtattttaaggttataatttgtcaattaaaccctttgtcgat 34424844  T
Q  120 tattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagtttgttgttttaaacaaa 192  Q
    |||| | ||||||||||| |||||||||||||  |||||||||| ||||| ||||||||||  ||||||||||    
T  34424843 tattattatatttttcaacaaaactaattaatattatatatttggaaaacaaaagtttgtttgtttaaacaaa 34424771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 9 - 239
Target Start/End: Original strand, 41540956 - 41541192
Alignment:
Q  9 tactccctccgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattatac 108  Q
    |||| ||| ||||||||||||||| || || ||| | | || ||| ||| |||||||| | |  |||||||||||| ||||||| |||||| |||||||     
T  41540956 tacttccttcgttcctttttaagtatcattctagtgcggatttttagtttctatttaactctcattttggtattttaagggtataatttataaattatat 41541055  T
Q  109 actttgtcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagtttgt------tgttttaaacaaaatttgtttct 202  Q
      ||||||| ||| ||| || |||||||||||||||||||||||||||||||||||||||||||||||| |      | ||||||| ||| |||||||||    
T  41541056 cttttgtcatttactcttatctttttcaataaaactaattaatgctatatatttgaaaaactaaagtttattttttgttttttaaataaagtttgtttct 41541155  T
Q  203 tgttatcttcaaatttaaacaaaattttgttacctat 239  Q
    ||||||||| |||||||||||||||||||||| ||||    
T  41541156 tgttatcttaaaatttaaacaaaattttgttatctat 41541192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 7 - 200
Target Start/End: Complemental strand, 11074135 - 11073940
Alignment:
Q  7 agtactccctccgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattat 106  Q
    ||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| |||  |||||||||||| ||||||  |||| ||||||||    
T  11074135 agtactccctccgttccttcttaagtgtctttttagggtgaatttttcgttcctatttaactgtctttttggtattttaagggtacaatttgtcaattat 11074036  T
Q  107 acactttgtcaattattctaatatttttcaataa--aactaattaatgctatatatttgaaaaactaaagtttgttgttttaaacaaaatttgttt 200  Q
    || |||||||||||| ||| || |||||| | ||  || ||||||||||||| |||||  | || ||||||||||| |||||||| || |||||||    
T  11074035 accctttgtcaattactcttatctttttctaaaactaattaattaatgctatttatttagagaattaaagtttgtttttttaaaccaagtttgttt 11073940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 38 - 189
Target Start/End: Original strand, 42756731 - 42756882
Alignment:
Q  38 tttagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattatacactttgtcaattattctaatatttttcaa 137  Q
    |||| ||| ||| |||||||| ||||||| ||||||||||||||||| |||||||||||| |||||||||   ||||||||||||||| |||||||||||    
T  42756731 tttaaggtaaatttttcgttcatatttaactgttgttttggtattttaagggtatgatttgtcaattatatcttttgtcaattattcttatatttttcaa 42756830  T
Q  138 taaaactaattaatgctatatatttgaaaaactaaagtttgttgttttaaac 189  Q
    ||||||||||||||||||||||||| ||||||||  |||||||  |||||||    
T  42756831 taaaactaattaatgctatatatttaaaaaactatggtttgtttatttaaac 42756882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 81 - 239
Target Start/End: Original strand, 33659686 - 33659846
Alignment:
Q  81 ttttgagggtatgatttatcaattatacactttgtcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagtttgtt 180  Q
    |||| ||||||| |||| |||||||||   ||||||||||| ||| || ||||||||||||||||||||||  ||||||||||||||||| |||||||||    
T  33659686 ttttaagggtataatttgtcaattatatcatttgtcaattactcttatctttttcaataaaactaattaatattatatatttgaaaaactgaagtttgtt 33659785  T
Q  181 gttttaaacaaaat--ttgtttcttgttatcttcaaatttaaacaaaattttgttacctat 239  Q
     |||||||| || |  |||||||||||||||||  ||||||||||||||||||||||||||    
T  33659786 tttttaaactaattgcttgtttcttgttatcttacaatttaaacaaaattttgttacctat 33659846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 9 - 200
Target Start/End: Original strand, 1397366 - 1397557
Alignment:
Q  9 tactccctccgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattatac 108  Q
    |||||||||| |||||||||||||||||||||||| ||||| |||||||||||||||| |||  ||||| |||||| || ||| |||||  |||| ||||    
T  1397366 tactccctccattcctttttaagtgtctttttaggatgaatttttcgttcctatttaactgtctttttgctattttaagcgtacgatttggcaataatac 1397465  T
Q  109 actttgtcaatta-ttctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagtttgttgttttaaacaaaatttgttt 200  Q
     |||||||||||| || ||   |||||   ||||||||||||||||||| ||||||||||| ||||||||||| |||||| |||| |||||||    
T  1397466 cctttgtcaattacttttatcttttttttgtaaaactaattaatgctatctatttgaaaaattaaagtttgtt-ttttaatcaaagtttgttt 1397557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 9 - 192
Target Start/End: Complemental strand, 20891479 - 20891301
Alignment:
Q  9 tactccctccgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattatac 108  Q
    |||||| ||||||||||||||||| | |||||| ||||||| |||||||||||||||| ||| |||||| |||||| ||||||  ||||||||||||||     
T  20891479 tactccatccgttcctttttaagttt-tttttatggtgaatttttcgttcctatttaactgtcgttttgatattttaagggtacaatttatcaattatat 20891381  T
Q  109 actttgtcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagtttgttgttttaaacaaa 192  Q
      ||||||||||| |||  || ||||||||||||||||||||||   |||||||| |||||||||||||||| |||||||||||    
T  20891380 catttgtcaattactcttgta-ttttcaataaaactaattaatg--ttatatttggaaaactaaagtttgtt-ttttaaacaaa 20891301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 60 - 235
Target Start/End: Complemental strand, 45273542 - 45273364
Alignment:
Q  60 tatttaaatgttgttttggtattttgagggtatgatttatcaattatacactttgtcaattattctaatatttttcaataaaactaattaatgctatata 159  Q
    ||||||| |||  |||||||||||| |||| | ||||  |||||||||| |||||||||||| ||| || ||||||||||||||||||||||| ||| ||    
T  45273542 tatttaattgtctttttggtattttaagggcacgattcgtcaattataccctttgtcaattactcttatctttttcaataaaactaattaatgatatcta 45273443  T
Q  160 tttgaaaaactaaagttt---gttgttttaaacaaaatttgtttcttgttatcttcaaatttaaacaaaattttgttac 235  Q
    |||  |||| ||||||||    || ||||||||||| |||||||||||||||||| |||||||||||||| ||||||||    
T  45273442 tttagaaaaataaagtttatattttttttaaacaaagtttgtttcttgttatcttaaaatttaaacaaaactttgttac 45273364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 9 - 180
Target Start/End: Complemental strand, 3310015 - 3309845
Alignment:
Q  9 tactccctccgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattatac 108  Q
    |||||| | |||||||||||||| |||| ||||  |||||| ||||||| |||||||| |||  ||||| |||||| |||||| ||||| |||||||||     
T  3310015 tactcctttcgttcctttttaagcgtctctttatagtgaatttttcgtttctatttaactgtctttttgatattttcagggtaagatttgtcaattatag 3309916  T
Q  109 actttgtcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagtttgtt 180  Q
    | ||||||||||| | | || |||||||||||||||||||| |||||| |||||||||||||||||||||||    
T  3309915 aatttgtcaattacttttat-tttttcaataaaactaattattgctatctatttgaaaaactaaagtttgtt 3309845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 54 - 197
Target Start/End: Complemental strand, 4701094 - 4700951
Alignment:
Q  54 cgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattatacactttgtcaattattctaatatttttcaataaaactaattaatgc 153  Q
    ||||||||||||| |||  |||||||||||| ||| || ||||||||||||||||  ||||||||||| ||| ||  |||||||||||| |||||||| |    
T  4701094 cgttcctatttaattgtgcttttggtattttaaggatacgatttatcaattatactatttgtcaattactcttatcgttttcaataaaattaattaatac 4700995  T
Q  154 tatatatttgaaaaactaaagtttgttgttttaaacaaaatttg 197  Q
    |||||||||| |||||||||  ||||| ||||||||||||||||    
T  4700994 tatatatttggaaaactaaatattgtttttttaaacaaaatttg 4700951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 9 - 200
Target Start/End: Original strand, 11083814 - 11084004
Alignment:
Q  9 tactccctccgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattatac 108  Q
    ||||||| |||||||||||||| |||| || | | | | || |  |||| |||||||| ||| ||||| ||||||| |||| ||||||| | ||||||||    
T  11083814 tactcccaccgttcctttttaaatgtcgttctggtgcggatttaacgtttctatttaactgtcgtttttgtattttaagggaatgatttgttaattatac 11083913  T
Q  109 actttgtcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagtttgttgttttaaacaaaatttgttt 200  Q
      ||||||||||  ||| || ||||| ||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||| |||||||    
T  11083914 cttttgtcaatttctctgatcttttttaataaaactaattaatgttatatatttgaaaaactaaagtttgtt-ttttaaacaaagtttgttt 11084004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 14 - 192
Target Start/End: Complemental strand, 36244209 - 36244031
Alignment:
Q  14 cctccgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttgaggg-tatgatttatcaattatacactt 112  Q
    |||||||| ||||||||||||| || ||| ||| || | | |||||||| ||| |||  |||||||||||| | || |||||||| |||||||||| |||    
T  36244209 cctccgtttctttttaagtgtcgttctagtgtggatttat-gttcctatctaactgtcattttggtatttttaaggatatgatttgtcaattataccctt 36244111  T
Q  113 tgtcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagtttgttgttttaaacaaa 192  Q
    ||||||||| ||| |||||||| ||||||||||||||||| |||||||||| ||||||||||||| || | |||||||||    
T  36244110 tgtcaattactcttatattttttaataaaactaattaatgttatatatttggaaaactaaagtttattttcttaaacaaa 36244031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 73 - 217
Target Start/End: Complemental strand, 1770293 - 1770148
Alignment:
Q  73 ttttggtattttgagggtatgatttatcaattatacactttgtcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaa 172  Q
    |||||||||||| ||| || |||||||||||||||   ||||||||| | ||| |  ||||||||||||||||||||||| |||||||||||||||||||    
T  1770293 ttttggtattttaaggatacgatttatcaattatatcatttgtcaatcactcttaattttttcaataaaactaattaatgttatatatttgaaaaactaa 1770194  T
Q  173 agtttgttgtttt-aaacaaaatttgtttcttgttatcttcaaatt 217  Q
    |||||||| |||| ||||||| | | |||||||||||||| |||||    
T  1770193 agtttgtttttttaaaacaaagtctatttcttgttatcttaaaatt 1770148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 130 - 239
Target Start/End: Complemental strand, 408545 - 408436
Alignment:
Q  130 tttttcaataaaactaattaatgctatatatttgaaaaactaaagtttgt--tgttttaaacaaaatttgtttcttgttatcttcaaatttaaacaaaat 227  Q
    |||||||||||||||||||||| |||||||||| ||||| ||||||||||  | ||||||||||||| ||||| |||||||||||||  |||||||||||    
T  408545 tttttcaataaaactaattaatactatatatttaaaaaattaaagtttgttattttttaaacaaaatatgttttttgttatcttcaa--ttaaacaaaat 408448  T
Q  228 tttgttacctat 239  Q
    ||||||||||||    
T  408447 tttgttacctat 408436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 73 - 233
Target Start/End: Complemental strand, 13141002 - 13140843
Alignment:
Q  73 ttttggtattttgagggtatgatttatcaattatacactttgtcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaa 172  Q
    |||||||||||| ||||||| |||||||||||||||  ||  ||||||| |||| |||||||||||||||||||| |||| ||| ||||||||||||| |    
T  13141002 ttttggtattttaagggtataatttatcaattatacctttcttcaattactcta-tatttttcaataaaactaataaatgttatctatttgaaaaactga 13140904  T
Q  173 agtttgttgt-tttaaacaaaatttgtttcttgttatcttcaaatttaaacaaaattttgtt 233  Q
    | |||||| | |||||||||| | | ||| || ||||| ||||||||||||||||| |||||    
T  13140903 aatttgttttctttaaacaaagtat-ttttttattatcctcaaatttaaacaaaatcttgtt 13140843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 60 - 168
Target Start/End: Complemental strand, 32113482 - 32113373
Alignment:
Q  60 tatttaaatgttgttttggtattttgag-ggtatgatttatcaattatacactttgtcaattattctaatatttttcaataaaactaattaatgctatat 158  Q
    ||||||| ||||||||||||||||| |  |||||||||| |||||||||  |||| ||||||||||| |||||||||||||||||||||||||| |||||    
T  32113482 tatttaagtgttgttttggtatttttaatggtatgatttgtcaattatatcctttatcaattattcttatatttttcaataaaactaattaatgttatat 32113383  T
Q  159 atttgaaaaa 168  Q
    ||||| ||||    
T  32113382 atttggaaaa 32113373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 68 - 200
Target Start/End: Complemental strand, 158210 - 158078
Alignment:
Q  68 tgttgttttggtattttgagggtatgatttatcaattatacactttgtcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaa 167  Q
    |||||| || ||||||| ||| || ||||| |||||||||| |||||  ||||| ||| || ||||||||||||||||||||||  |||||||||| |||    
T  158210 tgttgtgttagtattttaaggatacgatttgtcaattataccctttgcaaattactcttatctttttcaataaaactaattaattttatatatttggaaa 158111  T
Q  168 actaaagtttgttgttttaaacaaaatttgttt 200  Q
    |||||| |||||| ||||||||||| |||||||    
T  158110 actaaaatttgtttttttaaacaaagtttgttt 158078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 55 - 239
Target Start/End: Original strand, 4316654 - 4316855
Alignment:
Q  55 gttcctatttaaatgttgttttggtattttgaggg-tatgatttatcaattatacactttgtcaattattctaatatttttcaataaaactaattaatgc 153  Q
    |||||||||||| ||| ||||||||||||| | || | |||||| |||||||||   ||||||||||| ||| || |||||||||||||||||||||||     
T  4316654 gttcctatttaactgtcgttttggtatttttaaggatgtgatttgtcaattatatcttttgtcaattactcttatctttttcaataaaactaattaatgt 4316753  T
Q  154 tatatatttgaaaaactaaagtttgtt--------------gtttt--aaacaaaatttgtttcttgttatcttcaaatttaaacaaaattttgttacct 237  Q
    |||||||||| ||||||||||||| ||              |||||  ||||||| |||||| ||||||||||| |||||||||||||||||||| ||||    
T  4316754 tatatatttggaaaactaaagtttatttgttttttgtttttgtttttaaaacaaagtttgttccttgttatctttaaatttaaacaaaattttgtaacct 4316853  T
Q  238 at 239  Q
    ||    
T  4316854 at 4316855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 127 - 200
Target Start/End: Complemental strand, 7486376 - 7486303
Alignment:
Q  127 atatttttcaataaaactaattaatgctatatatttgaaaaactaaagtttgttgttttaaacaaaatttgttt 200  Q
    |||||||||||||||||||||||||| |||||||||| ||||||||||| |||| |||||||||||||||||||    
T  7486376 atatttttcaataaaactaattaatgttatatatttggaaaactaaagtctgtttttttaaacaaaatttgttt 7486303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 179 - 236
Target Start/End: Complemental strand, 25965860 - 25965802
Alignment:
Q  179 ttgttttaaa-caaaatttgtttcttgttatcttcaaatttaaacaaaattttgttacc 236  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  25965860 ttgttttaaaacaaaatttgtttcttgttatcttcaaatttaaacaaaattttgttacc 25965802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 186 - 240
Target Start/End: Original strand, 27746582 - 27746636
Alignment:
Q  186 aaacaaaatttgtttcttgttatcttcaaatttaaacaaaattttgttacctatg 240  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  27746582 aaacaaaatttgtttcttgttatcttcaaatttaaacaaaattttgctacctatg 27746636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 175 - 233
Target Start/End: Complemental strand, 29408778 - 29408720
Alignment:
Q  175 tttgttgttttaaacaaaatttgtttcttgttatcttcaaatttaaacaaaattttgtt 233  Q
    |||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  29408778 tttgtttttttaaacaaaacttgtttcttgttatcttcaaatttaaacaaaattttgtt 29408720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 73 - 170
Target Start/End: Original strand, 33659532 - 33659630
Alignment:
Q  73 ttttggtattttgaggg-tatgatttatcaattatacactttgtcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaact 170  Q
    |||||||||||| | || |||||||| ||||||||||| ||| | ||||| ||| |||||||||||||||||||||||||| |||||||||| ||||||    
T  33659532 ttttggtatttttaaggatatgatttgtcaattatacaatttattaattactcttatatttttcaataaaactaattaatgttatatatttggaaaact 33659630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 34424751 - 34424697
Alignment:
Q  186 aaacaaaatttgtttcttgttatcttcaaatttaaacaaaattttgttacctatg 240  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  34424751 aaacaaaatttgttttttgttatcttcaaatttaaacaaaattttgttacctatg 34424697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 69 - 206
Target Start/End: Original strand, 2218173 - 2218312
Alignment:
Q  69 gttgttttggtattttgagggtatgatttatcaattatacactttgtcaattattctaatatttt--tcaataaaactaattaatgctatatatttgaaa 166  Q
    |||||||||||||||| |||||||||||| |||  | ||| |||| ||||||| ||| || ||||  ||||||||||||||||||| ||| |||||| ||    
T  2218173 gttgttttggtattttaagggtatgatttctcacatttactctttctcaattactcttatttttttttcaataaaactaattaatgatatctatttg-aa 2218271  T
Q  167 aactaaagtttgt-tgttttaaacaaaatttgtttcttgtt 206  Q
    ||||||||||| |   ||||||||||| ||||||| |||||    
T  2218272 aactaaagtttttaatttttaaacaaagtttgttttttgtt 2218312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 116 - 177
Target Start/End: Original strand, 12411667 - 12411728
Alignment:
Q  116 caattattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagttt 177  Q
    |||||||||| |||||||||||||||||||||||   |||||||||||||||||||||||||    
T  12411667 caattattcttatatttttcaataaaactaattataactatatatttgaaaaactaaagttt 12411728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 116 - 177
Target Start/End: Original strand, 12423727 - 12423788
Alignment:
Q  116 caattattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagttt 177  Q
    |||||||||| |||||||||||||||||||||||   |||||||||||||||||||||||||    
T  12423727 caattattcttatatttttcaataaaactaattataactatatatttgaaaaactaaagttt 12423788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 59 - 191
Target Start/End: Complemental strand, 29882294 - 29882161
Alignment:
Q  59 ctatttaaatgttgttttggtattttgagggtatgatttatcaattatacactttgtcaattattctaatatttttcaataaaactaattaatgctatat 158  Q
    ||||||||  || |||||| |||||| ||| |||||||| | | |||||| |||| |||| || ||| || ||||| |||||||||||| |||| |||||    
T  29882294 ctatttaaccgtcgttttgttattttaaggatatgatttgttacttataccctttctcaactactcttatctttttgaataaaactaatcaatgttatat 29882195  T
Q  159 atttgaaaaactaaagtttgtt-gttttaaacaa 191  Q
    |||||||||||| || |||||| |||||||||||    
T  29882194 atttgaaaaacttaactttgttagttttaaacaa 29882161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 53 - 185
Target Start/End: Original strand, 37360292 - 37360425
Alignment:
Q  53 tcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattatacactttgtcaattattctaatatttttcaataaaactaattaatg 152  Q
    |||||| ||||||| |||||||| |||||||| | | |||||||| | | || ||| |||| ||||||| ||| |||||||||| |||||||||||||||    
T  37360292 tcgttcatatttaactgttgtttaggtattttaaagatatgatttgttatttgtaccctttctcaattactcttatatttttcactaaaactaattaatg 37360391  T
Q  153 ctatatattt-gaaaaactaaagtttgttgtttt 185  Q
     | | |||||  ||||||||||||||||| ||||    
T  37360392 ttgtctatttaaaaaaactaaagtttgttatttt 37360425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 194 - 240
Target Start/End: Complemental strand, 4959349 - 4959303
Alignment:
Q  194 tttgtttcttgttatcttcaaatttaaacaaaattttgttacctatg 240  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||    
T  4959349 tttgtttcttgttatcttcaaatttaaataaaattttgttacctatg 4959303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 186 - 240
Target Start/End: Original strand, 12411765 - 12411819
Alignment:
Q  186 aaacaaaatttgtttcttgttatcttcaaatttaaacaaaattttgttacctatg 240  Q
    |||||||||||||||| | |||||||||||||||||||||||||||||| |||||    
T  12411765 aaacaaaatttgtttcatcttatcttcaaatttaaacaaaattttgttatctatg 12411819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 186 - 240
Target Start/End: Original strand, 12423825 - 12423879
Alignment:
Q  186 aaacaaaatttgtttcttgttatcttcaaatttaaacaaaattttgttacctatg 240  Q
    |||||||||||||||| | |||||||||||||||||||||||||||||| |||||    
T  12423825 aaacaaaatttgtttcatcttatcttcaaatttaaacaaaattttgttatctatg 12423879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 73 - 187
Target Start/End: Original strand, 13386399 - 13386512
Alignment:
Q  73 ttttggtattttgagggtatgatttatcaattatacactttgtcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaa 172  Q
    |||| ||||||| ||| ||  |||| ||||||||||| ||| ||||||| ||| || |||||||||||| ||||||||||| || ||| |||||||||||    
T  13386399 ttttagtattttaaggatacaatttgtcaattatacattttctcaattactcttatttttttcaataaa-ctaattaatgccatgtatctgaaaaactaa 13386497  T
Q  173 agtttgttgttttaa 187  Q
    ||||| || ||||||    
T  13386498 agtttatttttttaa 13386512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 186 - 239
Target Start/End: Complemental strand, 158066 - 158013
Alignment:
Q  186 aaacaaaatttgtttcttgttatcttcaaatttaaacaaaattttgttacctat 239  Q
    ||||||| |||||||||||||| |||||||||||||||||||||||||| ||||    
T  158066 aaacaaagtttgtttcttgttaccttcaaatttaaacaaaattttgttatctat 158013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 11073934 - 11073881
Alignment:
Q  182 ttttaaacaaaatttgtttcttgttatcttcaaatttaaacaaaattttgttac 235  Q
    ||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||    
T  11073934 ttttaaataaagtttgtttcttgttattttcaaatttaaacaaaattttgttac 11073881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 60 - 168
Target Start/End: Original strand, 41117387 - 41117496
Alignment:
Q  60 tatttaaatgttgttttggtattttgagggtatgatttatcaattatacactttgtcaattattctaa-tatttttcaataaaactaattaatgctatat 158  Q
    ||||||| |||  ||||| ||| || || |||| |||| ||||||||| ||||| ||||||| ||| | |||||||||||||||||||||||| |||| |    
T  41117387 tatttaattgtcattttgatatcttaagtgtataatttgtcaattatagactttctcaattactcttactatttttcaataaaactaattaatactatct 41117486  T
Q  159 atttgaaaaa 168  Q
    ||||||||||    
T  41117487 atttgaaaaa 41117496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 111 - 192
Target Start/End: Complemental strand, 29408867 - 29408784
Alignment:
Q  111 tttgtcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagtttg--ttgttttaaacaaa 192  Q
    ||||||||||| | | || ||||||||||||| ||||||||| ||| |||||| ||||||||||||||  ||||||||||||||    
T  29408867 tttgtcaattacttttatctttttcaataaaagtaattaatgttatctatttgcaaaactaaagtttgttttgttttaaacaaa 29408784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 186 - 233
Target Start/End: Original strand, 1397567 - 1397614
Alignment:
Q  186 aaacaaaatttgtttcttgttatcttcaaatttaaacaaaattttgtt 233  Q
    |||||||||||||||||| ||||||| |||||||||||||||||||||    
T  1397567 aaacaaaatttgtttcttattatctttaaatttaaacaaaattttgtt 1397614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 179 - 229
Target Start/End: Complemental strand, 7486300 - 7486249
Alignment:
Q  179 ttgttttaaa-caaaatttgtttcttgttatcttcaaatttaaacaaaattt 229  Q
    |||||||||| ||| |||||||||||||||||||||||||||||||||||||    
T  7486300 ttgttttaaagcaatatttgtttcttgttatcttcaaatttaaacaaaattt 7486249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 66
Target Start/End: Complemental strand, 5783613 - 5783567
Alignment:
Q  20 ttcctttttaagtgtctttttagggtgaatatttcgttcctatttaa 66  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||||    
T  5783613 ttcctttttaagtgtctttttaggatgaatttttcgttcctatttaa 5783567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 66
Target Start/End: Complemental strand, 29408953 - 29408896
Alignment:
Q  9 tactccctccgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaa 66  Q
    |||||||||| |||||||| ||||||||||||||||||||| || ||| |||||||||    
T  29408953 tactccctccattccttttcaagtgtctttttagggtgaattttccgtacctatttaa 29408896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 194 - 239
Target Start/End: Complemental strand, 42872252 - 42872207
Alignment:
Q  194 tttgtttcttgttatcttcaaatttaaacaaaattttgttacctat 239  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||    
T  42872252 tttgtttcttgttatcttaaaatttaaacaaaactttgttacctat 42872207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 51 - 167
Target Start/End: Complemental strand, 42872389 - 42872273
Alignment:
Q  51 tttcgttcctatttaaatgttgttttggta-ttttgagggtatgatttatcaattatacactttgtcaattattctaatatttttcaataaaactaatta 149  Q
    |||||||  ||||||| ||| ||||||||| |||| || |||  |||| ||||||||||  ||||||||||| ||| || ||||| |||||| |||||||    
T  42872389 tttcgtttttatttaagtgtcgttttggtaattttaagagtaaaatttgtcaattataccttttgtcaattactcttattttttttaataaa-ctaatta 42872291  T
Q  150 atgctatatatttgaaaa 167  Q
    ||| ||||||||||||||    
T  42872290 atgttatatatttgaaaa 42872273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 116 - 192
Target Start/End: Original strand, 37814534 - 37814610
Alignment:
Q  116 caattattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagtttgttgttttaaacaaa 192  Q
    |||||| ||| || |||||||||||||||||| ||| |||| ||||| ||||||||||||| | | |||||||||||    
T  37814534 caattactcttatctttttcaataaaactaataaattctatctatttaaaaaactaaagttcgcttttttaaacaaa 37814610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 186 - 218
Target Start/End: Original strand, 42756905 - 42756937
Alignment:
Q  186 aaacaaaatttgtttcttgttatcttcaaattt 218  Q
    |||||||||||||||||||||||||||||||||    
T  42756905 aaacaaaatttgtttcttgttatcttcaaattt 42756937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 35
Target Start/End: Original strand, 32674187 - 32674217
Alignment:
Q  5 atagtactccctccgttcctttttaagtgtc 35  Q
    |||||||||||||||||||||||||||||||    
T  32674187 atagtactccctccgttcctttttaagtgtc 32674217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 185
Target Start/End: Original strand, 33024255 - 33024293
Alignment:
Q  147 ttaatgctatatatttgaaaaactaaagtttgttgtttt 185  Q
    ||||| |||||||||||||||||||||||||||| ||||    
T  33024255 ttaatactatatatttgaaaaactaaagtttgttttttt 33024293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 150258 - 150206
Alignment:
Q  182 ttttaaacaaaatttgtttcttgttatcttcaaatttaaacaaaattttgttac 235  Q
    ||||||||||| ||| ||||||||||||||| |||||||||||||  |||||||    
T  150258 ttttaaacaaagtttatttcttgttatcttc-aatttaaacaaaaaattgttac 150206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 59 - 163
Target Start/End: Complemental strand, 6674622 - 6674513
Alignment:
Q  59 ctatttaaatgttgttttggtattttgagggtatgatttatcaattatacactttgtcaattattc-----taatatttttcaataaaactaattaatgc 153  Q
    |||||||| |||||||||| |||||||||||||  |||| | |||||||   ||| ||||||| ||     || |  |||||| ||||||||||||||||    
T  6674622 ctatttaattgttgttttgatattttgagggtagaatttgttaattataacatttctcaattactcacacttactcattttcattaaaactaattaatgc 6674523  T
Q  154 tatatatttg 163  Q
    ||||||||||    
T  6674522 tatatatttg 6674513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 139 - 180
Target Start/End: Original strand, 31741919 - 31741960
Alignment:
Q  139 aaaactaattaatgctatatatttgaaaaactaaagtttgtt 180  Q
    |||||||||||||| ||||||||||||||| | |||||||||    
T  31741919 aaaactaattaatgttatatatttgaaaaattcaagtttgtt 31741960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 36
Target Start/End: Complemental strand, 11222580 - 11222552
Alignment:
Q  8 gtactccctccgttcctttttaagtgtct 36  Q
    |||||||||||||||||||||||||||||    
T  11222580 gtactccctccgttcctttttaagtgtct 11222552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 40
Target Start/End: Complemental strand, 31025208 - 31025172
Alignment:
Q  4 tatagtactccctccgttcctttttaagtgtcttttt 40  Q
    |||| ||||||||||||||||||||||||||| ||||    
T  31025208 tatattactccctccgttcctttttaagtgtcatttt 31025172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 93; Significance: 2e-45; HSPs: 3)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 35 - 235
Target Start/End: Original strand, 256682 - 256881
Alignment:
Q  35 ctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattatacactttgtcaattattctaatattttt 134  Q
    ||||||||||||| | |||||||||||||||| |||  |||||||||||| || |||  |||| ||||||||||  ||||||||||  ||| || |||||    
T  256682 ctttttagggtgattttttcgttcctatttaactgtctttttggtattttaagagtaccatttgtcaattataccatttgtcaatttctcttatcttttt 256781  T
Q  135 caataaaactaattaatgctatatatttgaaaaactaaagtttgttgttttaaacaaaatttgtttcttgttatcttcaaatttaaacaaaattttgtta 234  Q
    |||||||||||||||||| ||| |||||| ||||||||||||| || ||||||| | |  |||||||||||||||||||| |||||||||||||||||||    
T  256782 caataaaactaattaatgttatctatttggaaaactaaagttt-tttttttaaatataggttgtttcttgttatcttcaattttaaacaaaattttgtta 256880  T

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Target: scaffold0005; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 13 - 200
Target Start/End: Complemental strand, 272548 - 272361
Alignment:
Q  13 ccctccgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattatacactt 112  Q
    |||||| ||||||||||||||| ||||||   ||||| |||||||||||||||| ||| |||||| |||||| | ||||  ||||||||||||||  ||     
T  272548 ccctccattcctttttaagtgtatttttaaaatgaatttttcgttcctatttaactgtcgttttgatattttaatggtacaatttatcaattataacctc 272449  T
Q  113 tgtcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagtttgttgttttaaacaaaatttgttt 200  Q
    |||||||||  || ||||||||||||||||||||  ||| ||| |||||||||||| ||||||||||| ||||||||||| |||||||    
T  272448 tgtcaattacacttatatttttcaataaaactaacgaatactacatatttgaaaaattaaagtttgtttttttaaacaaagtttgttt 272361  T

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Target: scaffold0005; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 186 - 225
Target Start/End: Complemental strand, 272349 - 272310
Alignment:
Q  186 aaacaaaatttgtttcttgttatcttcaaatttaaacaaa 225  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  272349 aaacaaaatttgtttcttattatcttcaaatttaaacaaa 272310  T

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Target: scaffold0006 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 111 - 240
Target Start/End: Complemental strand, 46650 - 46524
Alignment:
Q  111 tttgtcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagtttgttgttttaaacaaaatttgtttcttgttatct 210  Q
    ||||||||||||||| ||| |||||||||||| ||||||||||||||||||||||||  |||||||||||  || |||||||||||||||||||| ||||    
T  46650 tttgtcaattattcttataattttcaataaaattaattaatgctatatatttgaaaat-taaagtttgtt--ttaaaacaaaatttgtttcttgtcatct 46554  T
Q  211 tcaaatttaaacaaaattttgttacctatg 240  Q
    |||||||||||||||||||||||| |||||    
T  46553 tcaaatttaaacaaaattttgttatctatg 46524  T

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Target: scaffold0118 (Bit Score: 65; Significance: 1e-28; HSPs: 3)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 9 - 185
Target Start/End: Original strand, 14831 - 15006
Alignment:
Q  9 tactccctccgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattatac 108  Q
    |||||||||||||| |||||||||||  ||  || | | || |  ||||| ||||||| ||| ||||||||||||| |||||||||||| ||||||||||    
T  14831 tactccctccgttcatttttaagtgttgttcgagtgcggatttaacgttcatatttaactgtcgttttggtattttaagggtatgatttgtcaattatac 14930  T
Q  109 actttgtcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagtttgttgtttt 185  Q
      |||||||||||  || ||  |||||||||||||||||||||| |||||||||| |||||||||||| ||| ||||    
T  14931 cttttgtcaattaccctcat-cttttcaataaaactaattaatgttatatatttggaaaactaaagttagttttttt 15006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 239
Target Start/End: Complemental strand, 15235 - 15178
Alignment:
Q  182 ttttaaacaaaatttgtttcttgttatcttcaaatttaaacaaaattttgttacctat 239  Q
    |||||||| ||  ||||||||| |||||||||||||||||| ||| ||||||||||||    
T  15235 ttttaaacgaagattgtttcttattatcttcaaatttaaactaaactttgttacctat 15178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 112 - 192
Target Start/End: Complemental strand, 15317 - 15241
Alignment:
Q  112 ttgtcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagtttgttgttttaaacaaa 192  Q
    ||||||| || ||| || |||||||||||||||||||||||    |||||||||||||  ||||||||| ||||| |||||    
T  15317 ttgtcaactactcttatttttttcaataaaactaattaatg----atatttgaaaaacataagtttgtttttttatacaaa 15241  T

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Target: scaffold0188 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 57 - 177
Target Start/End: Complemental strand, 6519 - 6399
Alignment:
Q  57 tcctatttaaatgttgttttggtattttgagggtatgatttatcaattatacactttgtcaatta-ttctaatatttttcaataaaactaattaatgcta 155  Q
    |||||||||| ||| ||||||||||||| || |||||||||||||||||||  |||||||||||| |||| || ||||||||||||| |||||| || ||    
T  6519 tcctatttaactgtcgttttggtattttaagtgtatgatttatcaattatatcctttgtcaattacttct-atgtttttcaataaaattaattattgtta 6421  T
Q  156 tatatttgaaaaactaaagttt 177  Q
    |||||||| |||||||||||||    
T  6420 tatatttggaaaactaaagttt 6399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1327 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold1327
Description:

Target: scaffold1327; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 9 - 185
Target Start/End: Original strand, 784 - 959
Alignment:
Q  9 tactccctccgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtattttgagggtatgatttatcaattatac 108  Q
    |||||||||| ||| |||||||||||||||||||||||| | |||||||||||||||| |    ||||| |||||| | |||| ||||| ||||||||||    
T  784 tactccctccattcttttttaagtgtctttttagggtgatt-tttcgttcctatttaacttcctttttgatattttaaaggtacgatttgtcaattatac 882  T
Q  109 actttgtcaattattctaatatttttcaataaaactaattaatgctatatatttgaaaaactaaagtttgttgtttt 185  Q
      ||| ||||||| | | || ||||||||| ||||||||| ||||||| || ||| |||| ||||||||||| ||||    
T  883 cttttctcaattacttttatctttttcaatgaaactaattgatgctatctagttggaaaattaaagtttgttttttt 959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 8 - 84
Target Start/End: Original strand, 202233 - 202309
Alignment:
Q  8 gtactccctccgttcctttttaagtgtctttttagggtgaatatttcgttcctatttaaatgttgttttggtatttt 84  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||| || |||  ||||||||||||    
T  202233 gtactccctccgttcctttttaagtgtctttttagggtgaatttttcgttcctattcaactgtctttttggtatttt 202309  T

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Target: scaffold1801 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold1801
Description:

Target: scaffold1801; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 139 - 235
Target Start/End: Original strand, 1236 - 1333
Alignment:
Q  139 aaaactaattaatgctatatatttgaaaaactaaagtttg-ttgttttaaacaaaatttgtttcttgttatcttcaaatttaaacaaaattttgttac 235  Q
    |||||||||||||||||| |||||| |||||||||||||| || ||||||||||| ||||||||||| |||||| |||||| |||||| || ||||||    
T  1236 aaaactaattaatgctatttatttggaaaactaaagtttgttttttttaaacaaagtttgtttcttgatatctttaaatttgaacaaatttgtgttac 1333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0242 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 2)
Name: scaffold0242
Description:

Target: scaffold0242; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 130 - 235
Target Start/End: Original strand, 14834 - 14941
Alignment:
Q  130 tttttcaataaaactaattaatgctatatatttgaaaaa-ctaaagtttgttgttttaaac-aaaatttgtttcttgttatcttcaaatttaaacaaaat 227  Q
    ||||||||| ||||||||||||  |||| |||||||||| |    ||||||| |||||||| ||||||| ||| |||||||||| |||||||| ||||||    
T  14834 tttttcaatcaaactaattaatattatacatttgaaaaatcgtttgtttgtttttttaaaccaaaatttatttattgttatctttaaatttaaccaaaat 14933  T
Q  228 tttgttac 235  Q
    ||||||||    
T  14934 tttgttac 14941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0242; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 130 - 235
Target Start/End: Original strand, 23669 - 23776
Alignment:
Q  130 tttttcaataaaactaattaatgctatatatttgaaaaa-ctaaagtttgttgttttaaac-aaaatttgtttcttgttatcttcaaatttaaacaaaat 227  Q
    ||||||||| ||||||||||||  |||| |||||||||| |    ||||||| |||||||| ||||||| ||| |||||||||| |||||||| ||||||    
T  23669 tttttcaatcaaactaattaatattatacatttgaaaaatcgtttgtttgtttttttaaaccaaaatttatttattgttatctttaaatttaaccaaaat 23768  T
Q  228 tttgttac 235  Q
    ||||||||    
T  23769 tttgttac 23776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0159 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0159
Description:

Target: scaffold0159; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 66
Target Start/End: Complemental strand, 37076 - 37030
Alignment:
Q  20 ttcctttttaagtgtctttttagggtgaatatttcgttcctatttaa 66  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||||    
T  37076 ttcctttttaagtgtctttttaggatgaatttttcgttcctatttaa 37030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 196005 - 195968
Alignment:
Q  3 atatagtactccctccgttcctttttaagtgtcttttt 40  Q
    ||||| ||||||||||||||||||||||||||| ||||    
T  196005 atatattactccctccgttcctttttaagtgtcatttt 195968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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