View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16120_high_19 (Length: 251)
Name: NF16120_high_19
Description: NF16120
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16120_high_19 |
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Alignment Details
Target: chr7 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 1 - 234
Target Start/End: Complemental strand, 2295550 - 2295317
Alignment:
| Q |
1 |
attttcctaaacacaaataaaatagaaaaccaaacaaatttagaaacatatcacaaatgaagcaacatttgaggaagattaatttgaagagaaaaaatat |
100 |
Q |
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| T |
2295550 |
attttcctaaacacaaataaaatagaaaaccaaacaaatttagaaacatatcataaatgaagcaacatttgaggaagattaatttgaagagaaaaaatat |
2295451 |
T |
|
| Q |
101 |
tggtcataccatttttatcaggaagaacaagagacacaattgatgcaccccaattggtgactttcaaagaaagaccacctttcttcagctcaaatattcc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2295450 |
tggtcataccatttttatcaggaagaacaagagacacaattgatgcaccccaattggtgactttcaaagaaagaccacctttcttcagctcaaatattcc |
2295351 |
T |
|
| Q |
201 |
tatcttttctttttcatcatagccattgacaaat |
234 |
Q |
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|| |||||||||||||||| |||||||||||||| |
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| T |
2295350 |
taccttttctttttcatcagagccattgacaaat |
2295317 |
T |
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