View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16120_low_17 (Length: 313)
Name: NF16120_low_17
Description: NF16120
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16120_low_17 |
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Alignment Details
Target: chr7 (Bit Score: 268; Significance: 1e-149; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 10 - 297
Target Start/End: Original strand, 42216870 - 42217157
Alignment:
| Q |
10 |
gacatcatcagcaatggcctcatcaaagccagcaagcatgtccatgtcactgcacccaatggtccaacaaactttatacattgcaatacgtgctgatggg |
109 |
Q |
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| T |
42216870 |
gacaccatcagcaatggcctcatcaaagccagcaagcatgtccatgtcactgcacccaatggtccaacaaactttatacattgcaatgcgtgctgatggg |
42216969 |
T |
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| Q |
110 |
acaccgccacgggcattgcctttaccaatgccataaagacttgcacccctcaccactgatccagccgctgtcgacgaagtgtgagtgccatggccctgat |
209 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| |
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| T |
42216970 |
acaccgccacgggcattgcctttaccaatgccataaagacttgcacctctcaccactgatccagctgctgtcgacgaagtgtgagtgccatggccctgat |
42217069 |
T |
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| Q |
210 |
catcaaccggacttgggttctcgatggttggaccagatgggtcgaggttgaagtattttgctcctatcaccttgctgcacaagaaaac |
297 |
Q |
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|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42217070 |
catccaccggacttgggttctcgatggttggaccagatgggtcgaggttgaagtattttgctcctatcaccttgctgcacaagaaaac |
42217157 |
T |
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