View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16120_low_21 (Length: 289)
Name: NF16120_low_21
Description: NF16120
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16120_low_21 |
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Alignment Details
Target: chr5 (Bit Score: 157; Significance: 2e-83; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 9996137 - 9995981
Alignment:
| Q |
1 |
ccaagattcctcattaaactacctagtacctagacagtgaccacatagtattgtcacatttctcactccctcgcttttggaaatcatacatagttctctt |
100 |
Q |
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| T |
9996137 |
ccaagattcctcattaaactacctagtacctagacagtgaccacatagtattgtcacatttctcactccctcgcttttggaaatcatacatagttctctt |
9996038 |
T |
|
| Q |
101 |
catttcaacatcgctttttcttgtacgatcatcaactttttcatggcaggtcaatta |
157 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
9996037 |
catttcaacatcgctttttcttgtacgatcatcaactttttcatggcaggtcaatta |
9995981 |
T |
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