View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16120_low_35 (Length: 220)
Name: NF16120_low_35
Description: NF16120
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16120_low_35 |
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| [»] chr6 (1 HSPs) |
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Alignment Details
Target: chr6 (Bit Score: 202; Significance: 1e-110; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 19 - 220
Target Start/End: Original strand, 32384798 - 32384999
Alignment:
| Q |
19 |
tttttaacagcatcatcaatcccactttcagatataccaacctgagtcaacaaattcaaacaattcacattaagtaataaacatagaaaatgggtcgaga |
118 |
Q |
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| T |
32384798 |
tttttaacagcatcatcaatcccactttcagatataccaacctgagtcaacaaattcaaacaattcacattaagtaataaacatagaaaatgggtcgaga |
32384897 |
T |
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| Q |
119 |
accacaaaattataaagggaaatgttaacgaccacaactaaaaattagaaatcacctgccgacattttcccacaccacttaatgttattttccaatcgag |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32384898 |
accacaaaattataaagggaaatgttaacgaccacaactaaaaattagaaatcacctgccgacattttcccacaccacttaatgttattttccaatcgag |
32384997 |
T |
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| Q |
219 |
ct |
220 |
Q |
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|| |
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| T |
32384998 |
ct |
32384999 |
T |
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