View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16121_high_3 (Length: 530)

Name: NF16121_high_3
Description: NF16121
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16121_high_3
NF16121_high_3
[»] chr1 (56 HSPs)
chr1 (132-519)||(5179238-5179627)
chr1 (229-406)||(39864094-39864273)
chr1 (58-173)||(52009372-52009487)
chr1 (244-406)||(16395003-16395165)
chr1 (242-406)||(49223942-49224107)
chr1 (242-407)||(31978607-31978773)
chr1 (231-389)||(9307612-9307772)
chr1 (229-399)||(12039065-12039237)
chr1 (244-402)||(2572468-2572626)
chr1 (237-406)||(11449877-11450045)
chr1 (242-408)||(38787338-38787505)
chr1 (242-395)||(26093391-26093545)
chr1 (242-394)||(917021-917174)
chr1 (231-406)||(24991609-24991786)
chr1 (242-365)||(7759212-7759336)
chr1 (242-403)||(20209799-20209961)
chr1 (58-107)||(5179630-5179679)
chr1 (242-406)||(40144803-40144968)
chr1 (244-359)||(8896335-8896451)
chr1 (242-395)||(15699119-15699274)
chr1 (243-347)||(36701919-36702023)
chr1 (243-347)||(36718023-36718127)
chr1 (244-395)||(42409993-42410145)
chr1 (244-406)||(31042796-31042959)
chr1 (278-408)||(32970521-32970652)
chr1 (244-406)||(10495838-10496003)
chr1 (243-407)||(34031481-34031647)
chr1 (18-63)||(5179697-5179742)
chr1 (242-410)||(13579573-13579742)
chr1 (242-347)||(37276458-37276563)
chr1 (242-395)||(6160426-6160580)
chr1 (242-406)||(37506121-37506289)
chr1 (242-347)||(26257956-26258061)
chr1 (244-357)||(27721531-27721644)
chr1 (242-406)||(52429341-52429506)
chr1 (302-389)||(23168966-23169054)
chr1 (229-347)||(14757610-14757729)
chr1 (252-346)||(6023666-6023760)
chr1 (302-407)||(35682761-35682866)
chr1 (271-406)||(41121778-41121917)
chr1 (229-293)||(6785239-6785304)
chr1 (254-378)||(28749000-28749125)
chr1 (242-395)||(33733230-33733383)
chr1 (246-405)||(45331339-45331502)
chr1 (242-294)||(25089155-25089207)
chr1 (242-294)||(35367799-35367851)
chr1 (229-347)||(44707776-44707895)
chr1 (246-339)||(24880874-24880970)
chr1 (302-406)||(27687298-27687404)
chr1 (481-519)||(52009260-52009298)
chr1 (244-293)||(22856307-22856356)
chr1 (18-63)||(52009499-52009544)
chr1 (243-347)||(31154126-31154230)
chr1 (302-395)||(6267823-6267917)
chr1 (242-292)||(37539124-37539174)
chr1 (244-292)||(4441674-4441722)
[»] chr5 (39 HSPs)
chr5 (242-407)||(7827876-7828042)
chr5 (242-406)||(6315728-6315893)
chr5 (244-380)||(8724986-8725123)
chr5 (242-406)||(40899915-40900080)
chr5 (229-406)||(8698292-8698471)
chr5 (243-395)||(27542793-27542946)
chr5 (242-406)||(40530175-40530340)
chr5 (229-377)||(41496063-41496213)
chr5 (242-387)||(6753629-6753774)
chr5 (242-406)||(4818548-4818713)
chr5 (244-347)||(27580599-27580702)
chr5 (244-393)||(21060629-21060779)
chr5 (242-339)||(6754026-6754123)
chr5 (242-413)||(1248548-1248720)
chr5 (242-384)||(2232046-2232185)
chr5 (229-389)||(31655036-31655198)
chr5 (242-347)||(22848395-22848500)
chr5 (302-389)||(9515803-9515891)
chr5 (244-347)||(4441020-4441123)
chr5 (327-408)||(843519-843601)
chr5 (242-406)||(41478824-41478989)
chr5 (278-406)||(32440174-32440303)
chr5 (279-406)||(38508138-38508266)
chr5 (242-403)||(11904202-11904365)
chr5 (242-406)||(30512636-30512802)
chr5 (242-406)||(30552976-30553142)
chr5 (242-406)||(41492299-41492464)
chr5 (242-347)||(29374339-29374444)
chr5 (243-379)||(42803598-42803735)
chr5 (244-384)||(15818453-15818596)
chr5 (243-400)||(29570390-29570548)
chr5 (302-390)||(37184046-37184135)
chr5 (242-294)||(19929943-19929995)
chr5 (369-406)||(5282467-5282504)
chr5 (302-347)||(5731833-5731878)
chr5 (254-379)||(29856056-29856180)
chr5 (331-407)||(42922818-42922894)
chr5 (370-406)||(2588019-2588055)
chr5 (255-315)||(38161455-38161515)
[»] chr3 (45 HSPs)
chr3 (242-406)||(37695618-37695784)
chr3 (242-407)||(19823008-19823174)
chr3 (242-395)||(30190624-30190778)
chr3 (242-406)||(36476581-36476746)
chr3 (229-379)||(43253843-43253995)
chr3 (244-406)||(29023919-29024081)
chr3 (229-406)||(36460369-36460548)
chr3 (229-406)||(44301545-44301724)
chr3 (243-407)||(37311948-37312113)
chr3 (246-395)||(24569064-24569214)
chr3 (254-406)||(38795353-38795506)
chr3 (229-406)||(8679007-8679186)
chr3 (242-395)||(10366606-10366767)
chr3 (242-390)||(12736541-12736690)
chr3 (242-406)||(5322892-5323055)
chr3 (244-395)||(11905821-11905973)
chr3 (242-395)||(45710847-45711001)
chr3 (244-408)||(37497491-37497656)
chr3 (278-400)||(49830162-49830286)
chr3 (229-408)||(51837911-51838091)
chr3 (242-407)||(1778640-1778805)
chr3 (244-381)||(28690760-28690898)
chr3 (252-393)||(43719274-43719415)
chr3 (244-404)||(19611908-19612068)
chr3 (244-378)||(11632080-11632214)
chr3 (242-379)||(37772944-37773082)
chr3 (242-347)||(23004395-23004500)
chr3 (242-342)||(39043772-39043875)
chr3 (243-408)||(3313252-3313414)
chr3 (252-390)||(14194563-14194701)
chr3 (256-378)||(34750507-34750630)
chr3 (229-294)||(12904847-12904913)
chr3 (242-395)||(53560214-53560368)
chr3 (244-379)||(27471334-27471470)
chr3 (302-389)||(31158492-31158579)
chr3 (319-389)||(33491053-33491124)
chr3 (331-408)||(17652834-17652912)
chr3 (244-395)||(19609298-19609450)
chr3 (244-323)||(30682103-30682182)
chr3 (244-389)||(38137413-38137562)
chr3 (242-406)||(49447747-49447909)
chr3 (242-347)||(3901162-3901267)
chr3 (306-410)||(50035166-50035271)
chr3 (242-294)||(17652749-17652801)
chr3 (319-351)||(37804898-37804930)
[»] chr7 (55 HSPs)
chr7 (246-406)||(34947508-34947669)
chr7 (244-384)||(24516271-24516412)
chr7 (243-408)||(83390-83556)
chr7 (228-406)||(26974015-26974198)
chr7 (229-408)||(28103723-28103904)
chr7 (243-407)||(28202268-28202433)
chr7 (242-408)||(9785992-9786159)
chr7 (231-407)||(11373387-11373565)
chr7 (242-406)||(34100507-34100672)
chr7 (302-406)||(44180269-44180374)
chr7 (244-406)||(7463219-7463382)
chr7 (229-389)||(21350605-21350764)
chr7 (229-395)||(16904369-16904537)
chr7 (242-384)||(3178186-3178329)
chr7 (243-377)||(41506054-41506189)
chr7 (242-395)||(759062-759216)
chr7 (229-389)||(22738691-22738853)
chr7 (229-389)||(46478270-46478432)
chr7 (254-406)||(5524396-5524549)
chr7 (244-379)||(30865973-30866109)
chr7 (243-406)||(23670491-23670654)
chr7 (242-384)||(32346034-32346177)
chr7 (242-390)||(2459475-2459622)
chr7 (243-396)||(27920993-27921147)
chr7 (252-384)||(21759966-21760099)
chr7 (244-379)||(38391754-38391890)
chr7 (242-407)||(40076322-40076485)
chr7 (244-406)||(13961965-13962128)
chr7 (258-408)||(16560528-16560679)
chr7 (258-408)||(16604983-16605134)
chr7 (284-406)||(39452390-39452512)
chr7 (274-395)||(42935697-42935819)
chr7 (242-406)||(21390299-21390466)
chr7 (242-318)||(25571423-25571499)
chr7 (244-378)||(49101669-49101807)
chr7 (242-384)||(19271715-19271858)
chr7 (242-345)||(32018734-32018837)
chr7 (242-347)||(32018935-32019041)
chr7 (242-347)||(33819218-33819323)
chr7 (244-347)||(43873929-43874032)
chr7 (229-389)||(7457398-7457560)
chr7 (242-352)||(37245694-37245803)
chr7 (331-408)||(46211524-46211602)
chr7 (277-409)||(2850838-2850971)
chr7 (242-294)||(6495007-6495059)
chr7 (244-339)||(17828379-17828473)
chr7 (252-294)||(35333057-35333099)
chr7 (314-378)||(12631381-12631446)
chr7 (369-406)||(36790878-36790915)
chr7 (242-294)||(42796009-42796064)
chr7 (271-323)||(21937831-21937883)
chr7 (242-294)||(36790744-36790796)
chr7 (302-395)||(37850700-37850791)
chr7 (242-294)||(44424148-44424200)
chr7 (229-292)||(47045546-47045610)
[»] chr8 (38 HSPs)
chr8 (243-406)||(10179901-10180065)
chr8 (235-406)||(34948641-34948813)
chr8 (242-409)||(31271018-31271186)
chr8 (243-347)||(42886998-42887102)
chr8 (275-395)||(51143-51263)
chr8 (244-406)||(11976890-11977053)
chr8 (229-347)||(44761508-44761627)
chr8 (244-395)||(17719223-17719375)
chr8 (244-414)||(27294005-27294176)
chr8 (242-407)||(39482612-39482778)
chr8 (242-406)||(9300067-9300232)
chr8 (247-379)||(21216082-21216215)
chr8 (229-395)||(7172897-7173065)
chr8 (242-409)||(40996316-40996484)
chr8 (244-406)||(10097945-10098108)
chr8 (242-395)||(32476284-32476438)
chr8 (277-384)||(1875568-1875676)
chr8 (246-408)||(13335217-13335380)
chr8 (274-378)||(42972490-42972595)
chr8 (243-347)||(5053167-5053271)
chr8 (242-408)||(39405759-39405926)
chr8 (229-406)||(45425620-45425799)
chr8 (244-397)||(4428315-4428468)
chr8 (242-294)||(29226595-29226647)
chr8 (244-406)||(31082618-31082781)
chr8 (243-294)||(32678401-32678452)
chr8 (331-397)||(32678804-32678871)
chr8 (244-346)||(17823920-17824022)
chr8 (242-406)||(31231727-31231893)
chr8 (302-391)||(36967418-36967508)
chr8 (242-347)||(396625-396730)
chr8 (302-409)||(2767242-2767350)
chr8 (302-404)||(39300894-39301000)
chr8 (279-347)||(41092028-41092096)
chr8 (302-388)||(7703128-7703215)
chr8 (242-347)||(22771849-22771954)
chr8 (243-316)||(35732119-35732192)
chr8 (327-406)||(6611779-6611859)
[»] chr4 (55 HSPs)
chr4 (244-406)||(38405061-38405224)
chr4 (242-407)||(49428300-49428466)
chr4 (244-401)||(2653419-2653575)
chr4 (242-406)||(33790690-33790855)
chr4 (243-407)||(52247386-52247551)
chr4 (229-407)||(32884784-32884964)
chr4 (229-406)||(17237255-17237434)
chr4 (229-406)||(47464324-47464503)
chr4 (244-409)||(11907555-11907721)
chr4 (242-406)||(36985783-36985948)
chr4 (242-406)||(47772978-47773143)
chr4 (242-407)||(49175892-49176058)
chr4 (242-406)||(7061623-7061788)
chr4 (229-407)||(34360638-34360818)
chr4 (252-407)||(52859757-52859913)
chr4 (244-406)||(11288589-11288751)
chr4 (244-406)||(5841386-5841550)
chr4 (244-410)||(2066788-2066955)
chr4 (244-406)||(17114439-17114602)
chr4 (242-406)||(16821290-16821455)
chr4 (229-407)||(6643618-6643798)
chr4 (302-395)||(51625140-51625234)
chr4 (243-406)||(6609759-6609924)
chr4 (243-372)||(35380326-35380456)
chr4 (243-393)||(42616875-42617026)
chr4 (277-377)||(42517626-42517727)
chr4 (252-408)||(44536153-44536310)
chr4 (242-375)||(49746958-49747091)
chr4 (244-379)||(35311209-35311345)
chr4 (242-389)||(39397341-39397489)
chr4 (243-406)||(43237241-43237405)
chr4 (278-400)||(28500856-28500979)
chr4 (272-390)||(30192232-30192351)
chr4 (247-412)||(2942598-2942763)
chr4 (244-406)||(22130042-22130209)
chr4 (304-390)||(27880217-27880303)
chr4 (245-406)||(53346759-53346921)
chr4 (242-347)||(21240723-21240828)
chr4 (243-406)||(38502441-38502605)
chr4 (242-389)||(40122830-40122978)
chr4 (242-294)||(51624783-51624835)
chr4 (243-294)||(18741546-18741597)
chr4 (242-403)||(461955-462117)
chr4 (302-395)||(8175550-8175644)
chr4 (244-385)||(30682176-30682318)
chr4 (242-344)||(50264102-50264204)
chr4 (280-379)||(46396869-46396969)
chr4 (280-406)||(4972595-4972722)
chr4 (254-391)||(3689571-3689709)
chr4 (242-348)||(47358967-47359073)
chr4 (244-293)||(31370373-31370422)
chr4 (302-406)||(32469907-32470012)
chr4 (280-384)||(52869107-52869212)
chr4 (242-294)||(19265805-19265857)
chr4 (331-390)||(25141889-25141949)
[»] scaffold0110 (1 HSPs)
scaffold0110 (242-407)||(1701-1867)
[»] chr6 (27 HSPs)
chr6 (242-406)||(11655898-11656063)
chr6 (243-408)||(13087528-13087694)
chr6 (243-408)||(29363304-29363470)
chr6 (242-389)||(181553-181700)
chr6 (237-406)||(23142659-23142829)
chr6 (242-406)||(6801928-6802093)
chr6 (242-406)||(15058114-15058279)
chr6 (237-395)||(1955942-1956101)
chr6 (230-395)||(3291731-3291898)
chr6 (244-407)||(21010172-21010340)
chr6 (231-379)||(1781789-1781937)
chr6 (244-408)||(6834319-6834484)
chr6 (231-389)||(3720210-3720370)
chr6 (242-407)||(31894161-31894327)
chr6 (242-363)||(24983444-24983566)
chr6 (255-407)||(32440596-32440749)
chr6 (243-378)||(13909422-13909558)
chr6 (242-407)||(15582280-15582446)
chr6 (244-294)||(34657627-34657677)
chr6 (254-347)||(1063615-1063708)
chr6 (242-323)||(11143623-11143704)
chr6 (243-323)||(30716898-30716978)
chr6 (242-293)||(15046121-15046171)
chr6 (242-347)||(1225045-1225149)
chr6 (302-347)||(4590610-4590655)
chr6 (245-294)||(5302351-5302400)
chr6 (242-294)||(13206897-13206949)
[»] scaffold0330 (1 HSPs)
scaffold0330 (244-406)||(5389-5552)
[»] chr2 (41 HSPs)
chr2 (242-395)||(39691487-39691641)
chr2 (242-401)||(45235578-45235738)
chr2 (244-410)||(16463688-16463855)
chr2 (242-395)||(37322425-37322580)
chr2 (237-386)||(16805873-16806023)
chr2 (237-386)||(16845154-16845304)
chr2 (242-406)||(25637478-25637642)
chr2 (229-378)||(5789627-5789778)
chr2 (229-406)||(17695313-17695492)
chr2 (242-407)||(39785582-39785751)
chr2 (242-410)||(36794281-36794450)
chr2 (242-409)||(14523320-14523488)
chr2 (242-408)||(15359036-15359203)
chr2 (229-347)||(35313870-35313989)
chr2 (327-408)||(26607917-26607999)
chr2 (246-395)||(43410427-43410577)
chr2 (244-407)||(36354393-36354557)
chr2 (252-386)||(43115773-43115908)
chr2 (242-347)||(8947063-8947168)
chr2 (302-390)||(19937734-19937823)
chr2 (244-364)||(17346356-17346476)
chr2 (242-385)||(31448665-31448809)
chr2 (243-401)||(34120395-34120552)
chr2 (242-293)||(5272204-5272255)
chr2 (244-379)||(16377634-16377774)
chr2 (244-346)||(35242309-35242411)
chr2 (243-389)||(3323254-3323387)
chr2 (242-347)||(43699610-43699712)
chr2 (244-294)||(26863422-26863472)
chr2 (244-294)||(39329728-39329777)
chr2 (242-294)||(9458330-9458382)
chr2 (242-390)||(18853167-18853317)
chr2 (369-408)||(5272142-5272181)
chr2 (363-406)||(30544402-30544445)
chr2 (302-408)||(32783421-32783527)
chr2 (242-380)||(34225587-34225726)
chr2 (244-294)||(19937384-19937434)
chr2 (244-294)||(32831239-32831289)
chr2 (325-406)||(39443793-39443875)
chr2 (242-287)||(7494909-7494954)
chr2 (242-294)||(11742592-11742644)
[»] scaffold0182 (1 HSPs)
scaffold0182 (246-406)||(20306-20467)
[»] scaffold0159 (1 HSPs)
scaffold0159 (229-378)||(34000-34151)
[»] scaffold0583 (1 HSPs)
scaffold0583 (242-406)||(2022-2187)
[»] scaffold1809 (1 HSPs)
scaffold1809 (229-347)||(697-816)
[»] scaffold1391 (1 HSPs)
scaffold1391 (302-408)||(1768-1875)
[»] scaffold0302 (1 HSPs)
scaffold0302 (242-407)||(16095-16261)
[»] scaffold0095 (1 HSPs)
scaffold0095 (242-408)||(50201-50368)
[»] scaffold0328 (1 HSPs)
scaffold0328 (242-402)||(7938-8099)
[»] scaffold0294 (1 HSPs)
scaffold0294 (307-406)||(17097-17197)
[»] scaffold0018 (1 HSPs)
scaffold0018 (244-406)||(135990-136153)
[»] scaffold0012 (1 HSPs)
scaffold0012 (242-347)||(105681-105786)
[»] scaffold0011 (1 HSPs)
scaffold0011 (232-294)||(14234-14297)
[»] scaffold0470 (1 HSPs)
scaffold0470 (327-406)||(1067-1147)


Alignment Details
Target: chr1 (Bit Score: 235; Significance: 1e-130; HSPs: 56)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 132 - 519
Target Start/End: Complemental strand, 5179627 - 5179238
Alignment:
Q  132 tattccaccatcgccgccgatgccattgctcgctttcaggta----ttcatgatttcaccaaaatttgtccaactaattgtcactttattannnnnnnnn 227  Q
    ||||||||||||||||||||||||||||||||||||||||||    ||||||||||||||||||||||||||||||||||||||||| ||              
T  5179627 tattccaccatcgccgccgatgccattgctcgctttcaggtacctattcatgatttcaccaaaatttgtccaactaattgtcactttttttt-------- 5179536  T
Q  228 cttcc-actgttatac-cttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgc 325  Q
     |||| |||||||||| ||||||| ||||||||||||||||||| ||||||||||||||||||||||||||   ||||||||||||||||||||||||||    
T  5179535 -ttccgactgttatactcttatttcctgaatttcatccaatttatctactccactaactacaattaatatgaaaactttagtaaatgatactcattttgc 5179437  T
Q  326 tattgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtattatctaactttcatggg 424  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| ||||    
T  5179436 tattgaaatcaacacaattaatcattttgttaagaatcgtgtacaaaccttaaacgactgttatttagagatggagggagtattatctaactttcgtggg 5179337  T
Q  425 ttagtttggtttctt----nnnnnnnnntctaacttaggaattttaatttcgttatatgaaatttgacagcggcttttgggaaagaaagttatattcat 519  Q
    |||||||||||||||             ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5179336 ttagtttggtttcttaaaaaaaaaaaaatctaacttagggattttaatttcgttatatgaaatttgacagcggcttttgggaaagaaagttatattcat 5179238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 229 - 406
Target Start/End: Original strand, 39864094 - 39864273
Alignment:
Q  229 ttccactgttatacc-ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgcta 327  Q
    ||||||| ||||||| ||||||| |||||||||||||| ||| |||||||||||||||||||||||| | | | ||||||||||| |||| ||||| | |    
T  39864094 ttccactattatacccttatttattgaatttcatccaacttaactactccactaactacaattaataagagtattttagtaaatgctactaattttacca 39864193  T
Q  328 ttgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 406  Q
    |||||||||||||||||||| ||||  |||| ||||||| |||||| |||||| ||||| ||||||||| ||||||||||    
T  39864194 ttgaaatcaacacaattaatcatttccttaataatcgtgcacaaactttaaacgactataatttagagacggagggagta 39864273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 58 - 173
Target Start/End: Complemental strand, 52009487 - 52009372
Alignment:
Q  58 caaatgacgacgaaccctatgtcatcacaacccctctttactacgtcaacgcccctccccatatgggtagcgcttattccaccatcgccgccgatgccat 157  Q
    ||||||| ||| |||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||| ||||| ||||| |||||    
T  52009487 caaatgatgaccaaccctatgtcatcacaacccctctttactacgttaacgcccctcctcatatgggtagcgcctattccactatcgctgccgacgccat 52009388  T
Q  158 tgctcgctttcaggta 173  Q
    ||||||||||||||||    
T  52009387 tgctcgctttcaggta 52009372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 244 - 406
Target Start/End: Complemental strand, 16395165 - 16395003
Alignment:
Q  244 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaat 343  Q
    ||||||| ||||||||||| || ||| |||||||||||||||||||||| | | | | |||||||||||||||| ||||| ||||  |||||||||||||    
T  16395165 ttatttattgaatttcatctaacttaactactccactaactacaattaaaaag-gtattttagtaaatgatactaattttactatcaaaatcaacacaat 16395067  T
Q  344 taat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 406  Q
    |||| ||||| |||| ||||||| | ||||||||||| |||||| || | ||| ||||||||||    
T  16395066 taatcattttcttaataatcgtgcataaaccttaaacgactatttttaaaagacggagggagta 16395003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 242 - 406
Target Start/End: Complemental strand, 49224107 - 49223942
Alignment:
Q  242 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 341  Q
    ||||||||| |||| ||||||||| ||| |||||||||||||||||||||||| | |   |||||||||||||||| ||||| | ||  |||||||||||    
T  49224107 ccttatttattgaacttcatccaacttaactactccactaactacaattaataagggtgttttagtaaatgatactaattttaccatcaaaatcaacaca 49224008  T
Q  342 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 406  Q
    |||||| ||||| |||  || |||| |  || ||||||| ||||||||||||||| ||||||||||    
T  49224007 attaatcattttcttagtaaccgtgcatcaatcttaaacgactattatttagagacggagggagta 49223942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 242 - 407
Target Start/End: Complemental strand, 31978773 - 31978607
Alignment:
Q  242 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 341  Q
    ||||||||| ||||||| || ||| ||| |||||||| |||||| |||||||| |   | |||||||| ||||| | ||||| | |||||||||||||||    
T  31978773 ccttatttaatgaatttaattcaacttaactactccattaactataattaataagaatagtttagtaagtgatattaattttaccattgaaatcaacaca 31978674  T
Q  342 attaatattttg-ttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtat 407  Q
    |||||| ||||  |||| ||||||| |||||| |||||| ||||| ||||||||| |||||||||||    
T  31978673 attaatctttttcttaataatcgtgcacaaactttaaacgactataatttagagacggagggagtat 31978607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 231 - 389
Target Start/End: Original strand, 9307612 - 9307772
Alignment:
Q  231 ccactgttatacctt-atttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctatt 329  Q
    ||||| ||||||||| ||||| |||||||||||||| ||| |||||||||||||||||||||| | | |   ||||||||||| || | |||||   |||    
T  9307612 ccactattatacctttatttattgaatttcatccaacttaactactccactaactacaattaacaagggtgttttagtaaatgctattaattttatcatt 9307711  T
Q  330 gaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatt 389  Q
    |||||||||||| ||||| ||||  |||| ||||||||||||||||||||| |||| ||||    
T  9307712 gaaatcaacacagttaatcatttccttaataatcgtgtacaaaccttaaacgactaatatt 9307772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 229 - 399
Target Start/End: Original strand, 12039065 - 12039237
Alignment:
Q  229 ttccactgttatacc-ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgcta 327  Q
    ||||||| ||||||| ||||||| |||||| ||||||| |||  ||||||| ||||||||||||||| | |    |||||||||| |||| ||||| | |    
T  12039065 ttccactattatacccttatttattgaattacatccaacttaaatactccattaactacaattaataagagtgtattagtaaatgttactaattttacca 12039164  T
Q  328 ttgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatgga 399  Q
    |||||||||||||||||||| ||||  |||| ||||||| ||||||||||||| |||| ||||  ||||||||    
T  12039165 ttgaaatcaacacaattaatcatttccttaataatcgtgcacaaaccttaaacgactaatattgtgagatgga 12039237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 244 - 402
Target Start/End: Original strand, 2572468 - 2572626
Alignment:
Q  244 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaat 343  Q
    ||||||| |||||||||| ||| ||| ||||||||||||||||||||||||  || | |||||||||||||| | ||||| | ||||||||||| |||||    
T  2572468 ttatttattgaatttcattcaacttaactactccactaactacaattaataattgta-tttagtaaatgatattaattttaccattgaaatcaatacaat 2572566  T
Q  344 taat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggaggg 402  Q
    |||| ||| | |||| ||||||  |||||| |||||| ||||| ||||| ||| ||||||    
T  2572567 taatcattattttaataatcgtacacaaactttaaacgactataatttaaagacggaggg 2572626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 237 - 406
Target Start/End: Original strand, 11449877 - 11450045
Alignment:
Q  237 ttataccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatca 336  Q
    |||||||||||||| |||||||||||||||||  |||||| | |||||||||||||||  ||   | ||| |||| ||  | ||||| | ||||||||||    
T  11449877 ttataccttatttattgaatttcatccaattttactactctattaactacaattaataaatgtgttatagaaaattat--taattttaccattgaaatca 11449974  T
Q  337 acacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 406  Q
    ||| ||||||  ||||  |||| ||||||| ||||||||||||||||||||||||||||| ||| ||||||    
T  11449975 acataattaaccatttccttaataatcgtgcacaaaccttaaacaactattatttagagacggaaggagta 11450045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 242 - 408
Target Start/End: Original strand, 38787338 - 38787505
Alignment:
Q  242 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 341  Q
    ||||||||| |||||||||||||||||| ||||||||||||||| |||||||| |     ||| | ||||||||||  |||| | ||  |||||||||||    
T  38787338 ccttatttattgaatttcatccaatttaactactccactaactataattaataaggatgttttggcaaatgatactagttttaccatcaaaatcaacaca 38787437  T
Q  342 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtatt 408  Q
    || ||| ||||  |||| ||||||| | ||||||||||| ||||||||||||||| || |||||||||    
T  38787438 atcaatcatttccttaataatcgtgcataaaccttaaacgactattatttagagacggggggagtatt 38787505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 242 - 395
Target Start/End: Original strand, 26093391 - 26093545
Alignment:
Q  242 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 341  Q
    ||||||||| |||| |||||| || |||  |||| |||||||||||||||||| |   | |||| ||||||||| | ||||| | |||||||||||||||    
T  26093391 ccttatttattgaacttcatctaacttaattacttcactaactacaattaataaggatattttaataaatgatattaattttaccattgaaatcaacaca 26093490  T
Q  342 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagaga 395  Q
    |||||| ||||| |||| ||||||| ||||| ||||||| || ||||||||||||    
T  26093491 attaatcattttcttaataatcgtgcacaaatcttaaacgaccattatttagaga 26093545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 242 - 394
Target Start/End: Original strand, 917021 - 917174
Alignment:
Q  242 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 341  Q
    ||||||||| | |||||||| ||| ||| ||| || ||||||||||||||||| | | | |||||||||||||| | ||||| | ||| ||||||||| |    
T  917021 ccttatttattaaatttcatgcaacttaactaatctactaactacaattaataagggtattttagtaaatgatattaattttaccatttaaatcaacata 917120  T
Q  342 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagag 394  Q
    |||||| ||||  |||| ||||||| ||||||||||||| ||||| ||||||||    
T  917121 attaatcatttatttaataatcgtgcacaaaccttaaacgactataatttagag 917174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 231 - 406
Target Start/End: Complemental strand, 24991786 - 24991609
Alignment:
Q  231 ccactgttatacctt-atttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctatt 329  Q
    ||||| ||||||||| ||||| |||||||||||||| ||| ||| ||||||||||||||||||||   |   | ||||||||  || | ||||| |  ||    
T  24991786 ccactattatacctttatttattgaatttcatccaacttaactattccactaactacaattaataaaggtgttgtagtaaatactattaattttaccgtt 24991687  T
Q  330 gaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 406  Q
    |||||||||||||||||| ||||  |||| ||||||||||||||||||||| |||| ||||  |||| ||||||||||    
T  24991686 gaaatcaacacaattaatcatttccttaataatcgtgtacaaaccttaaacgactaatattgtgagacggagggagta 24991609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 242 - 365
Target Start/End: Original strand, 7759212 - 7759336
Alignment:
Q  242 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 341  Q
    ||||||||| |||||||||| ||| ||| ||| |||||||||||||||||||| | | | |||||||||||||| | ||||  | |||||||||||||||    
T  7759212 ccttatttattgaatttcattcaacttaactattccactaactacaattaataagagtattttagtaaatgatattaatttcaccattgaaatcaacaca 7759311  T
Q  342 attaa-tattttgttaagaatcgtg 365  Q
    ||||| |||||| |||| |||||||    
T  7759312 attaattatttttttaataatcgtg 7759336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 242 - 403
Target Start/End: Complemental strand, 20209961 - 20209799
Alignment:
Q  242 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 341  Q
    ||||||||| |||| ||||||||| ||| |||||||||||||||||||||||| |     |||||||||||||||| ||||| ||||  ||||||||| |    
T  20209961 ccttatttattgaacttcatccaacttaactactccactaactacaattaataaggatgttttagtaaatgatactaattttactatcaaaatcaacata 20209862  T
Q  342 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggaggga 403  Q
    |||||| ||||| |||| ||  ||| |  | | |||||| ||||||||||||||| |||||||    
T  20209861 attaatcattttcttaataacggtgcatcacctttaaacgactattatttagagacggaggga 20209799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 58 - 107
Target Start/End: Complemental strand, 5179679 - 5179630
Alignment:
Q  58 caaatgacgacgaaccctatgtcatcacaacccctctttactacgtcaac 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5179679 caaatgacgacgaaccctatgtcatcacaacccctctttactacgtcaac 5179630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 242 - 406
Target Start/End: Complemental strand, 40144968 - 40144803
Alignment:
Q  242 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 341  Q
    ||||||||| |||| ||||||||| ||| |||||||| ||||||||||||||| | |   |||||||||||||| | ||||| | ||  |||||||||||    
T  40144968 ccttatttattgaacttcatccaacttaactactccattaactacaattaataagggtgttttagtaaatgatattaattttaccatcaaaatcaacaca 40144869  T
Q  342 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 406  Q
    |||||| ||||| |||| ||  ||| |  || ||| ||| |||||||||||||||| |||||||||    
T  40144868 attaatcattttcttaataactgtgcatcaatcttgaacgactattatttagagattgagggagta 40144803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 244 - 359
Target Start/End: Complemental strand, 8896451 - 8896335
Alignment:
Q  244 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaat 343  Q
    ||||||| |||||||||||||| ||| | ||||||||||||||||||||||  |  | |||||||||||||| | ||||| | |||||||||||||||||    
T  8896451 ttatttattgaatttcatccaacttaaccactccactaactacaattaataaatatattttagtaaatgatattaattttaccattgaaatcaacacaat 8896352  T
Q  344 taat-attttgttaaga 359  Q
     ||| ||||| ||||||    
T  8896351 caatcattttcttaaga 8896335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 242 - 395
Target Start/End: Original strand, 15699119 - 15699274
Alignment:
Q  242 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 341  Q
    ||||||||| |||| ||||||||| ||| |||||||||||||||||||||||| | |   |||||||||||||| | ||||| | ||  |||||||||||    
T  15699119 ccttatttattgaacttcatccaacttaactactccactaactacaattaataagggtgttttagtaaatgatattaattttaccatcaaaatcaacaca 15699218  T
Q  342 attaat--attttgttaagaatcgtgtacaaaccttaaacaactattatttagaga 395  Q
    ||||||   |||| |||| ||  ||| |  |||||||||| |||||||||||||||    
T  15699219 attaatcatttttcttaataactgtgcatcaaccttaaacgactattatttagaga 15699274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 243 - 347
Target Start/End: Original strand, 36701919 - 36702023
Alignment:
Q  243 cttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaa 342  Q
    |||||||| ||||||||||| || ||| | | |||||||||||||||||||| | | | |||||||||||||||| ||||| | ||||||||||||| ||    
T  36701919 cttatttattgaatttcatcaaacttaacgattccactaactacaattaataagggcattttagtaaatgatactaattttaccattgaaatcaacataa 36702018  T
Q  343 ttaat 347  Q
    |||||    
T  36702019 ttaat 36702023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 243 - 347
Target Start/End: Original strand, 36718023 - 36718127
Alignment:
Q  243 cttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaa 342  Q
    |||||||| ||||||||||| || ||| | | |||||||||||||||||||| | | | |||||||||||||||| ||||| | ||||||||||||| ||    
T  36718023 cttatttattgaatttcatcaaacttaacgattccactaactacaattaataagggcattttagtaaatgatactaattttaccattgaaatcaacataa 36718122  T
Q  343 ttaat 347  Q
    |||||    
T  36718123 ttaat 36718127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 244 - 395
Target Start/End: Original strand, 42409993 - 42410145
Alignment:
Q  244 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaat 343  Q
    ||||||| |||| ||||||| | ||| |||  | ||||||||||||||||| | |  ||||||||||||||| | ||||| | ||  |||||||||||||    
T  42409993 ttatttattgaacttcatcctacttaactatccaactaactacaattaataagggtgctttagtaaatgatattaattttaccatcaaaatcaacacaat 42410092  T
Q  344 taat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagaga 395  Q
    |||| ||||| |||| || |||| |  ||||||||||||||||||||||||||    
T  42410093 taatcatttttttaataaccgtgcatcaaccttaaacaactattatttagaga 42410145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 244 - 406
Target Start/End: Original strand, 31042796 - 31042959
Alignment:
Q  244 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaat 343  Q
    ||||||| |||||||||| ||| |||  |||| ||||| |||||||||||| | | | |  ||||||||||||| ||||| | |||||||||||||||||    
T  31042796 ttatttattgaatttcattcaacttaattacttcactacctacaattaataagggtattacagtaaatgatactaattttaccattgaaatcaacacaat 31042895  T
Q  344 taat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 406  Q
    |||| ||||  |||| |||| || ||||||||||||  |||| ||||  |||| ||||||||||    
T  31042896 taatcatttccttaataatcatgcacaaaccttaaatgactaatattgtgagacggagggagta 31042959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 278 - 408
Target Start/End: Complemental strand, 32970652 - 32970521
Alignment:
Q  278 actaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaattaat-attttgttaagaatcgtgtacaaacctta 376  Q
    |||||| |||||||||| | | | |||||||||| ||| | |||||   ||||||||||||||||||||| ||||| |||| |||||| ||| |||||||    
T  32970652 actaacaacaattaatacgagtattttagtaaataatattaattttatcattgaaatcaacacaattaatcattttcttaataatcgtatacgaacctta 32970553  T
Q  377 aacaactattatttagagatggagggagtatt 408  Q
    ||| | |||||||| ||||| |||||||||||    
T  32970552 aacgaatattattttgagatagagggagtatt 32970521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 244 - 406
Target Start/End: Original strand, 10495838 - 10496003
Alignment:
Q  244 ttatttactgaatttcatccaatttagctactccactaactacaattaat-atgtggactttagtaaatgatactcattttgctattgaaatcaacacaa 342  Q
    ||||||| |||||||||||||| ||| |||||||||||| |||||||||| | |||   |||||||||||||||| ||||| | ||  ||||||||| ||    
T  10495838 ttatttattgaatttcatccaacttaactactccactaattacaattaataaagtg--ttttagtaaatgatactaattttaccatcaaaatcaacaaaa 10495935  T
Q  343 ttaat-attttgttaagaatcgtgtacaaaccttaaaca---actattatttagagatggagggagta 406  Q
    ||||| ||||| |||| |||| |  | ||||||||||||   | |||||||||||||| |||||||||    
T  10495936 ttaataatttttttaataatcttacataaaccttaaacaattagtattatttagagatagagggagta 10496003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 243 - 407
Target Start/End: Complemental strand, 34031647 - 34031481
Alignment:
Q  243 cttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaa 342  Q
    |||||||| |||||||||| |||  |  ||| | ||||||||||||||||||   | | |||||||||||||| | ||||| | |||| |||||||||||    
T  34031647 cttatttattgaatttcattcaaccttactattacactaactacaattaataacggtattttagtaaatgatattaattttaccattggaatcaacacaa 34031548  T
Q  343 ttaat-attttgttaagaatcgtgtacaaaccttaaaca-actattatttagagatggagggagtat 407  Q
     |||| ||||  |||| |||| || |||||||||||||| ||||| ||||||||| |||||||||||    
T  34031547 gtaatcatttccttaataatcatgcacaaaccttaaacagactataatttagagacggagggagtat 34031481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 5179742 - 5179697
Alignment:
Q  18 atttccatttcccttcttctccaagagcagctttgttctgcaaatg 63  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  5179742 atttccatttcccttcttctccaagagcagctttgttctgcaaatg 5179697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 242 - 410
Target Start/End: Complemental strand, 13579742 - 13579573
Alignment:
Q  242 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 341  Q
    ||||||||| ||||||||||| || |||  ||||||||||||||||||||||||| |   ||| |||||||||| | || |||  ||  |||||||||||    
T  13579742 ccttatttattgaatttcatcaaacttaaatactccactaactacaattaatatgggtgtttttgtaaatgatattaatattgtcatcaaaatcaacaca 13579643  T
Q  342 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtattat 410  Q
    |||||| ||||  |||| |||| || | ||||||||||  | ||||| ||||||| ||| ||||||||||    
T  13579642 attaatcatttctttaataatcatgcataaaccttaaatgattattacttagagacggatggagtattat 13579573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 242 - 347
Target Start/End: Original strand, 37276458 - 37276563
Alignment:
Q  242 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 341  Q
    ||||||||| |||||||||||||||||| ||| |||||||||||||||||||| | |   ||||||||| |||||| ||||| | ||  |||||||||||    
T  37276458 ccttatttattgaatttcatccaatttaactattccactaactacaattaataagggtgttttagtaaacgatactaattttaccatcaaaatcaacaca 37276557  T
Q  342 attaat 347  Q
     |||||    
T  37276558 gttaat 37276563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 242 - 395
Target Start/End: Complemental strand, 6160580 - 6160426
Alignment:
Q  242 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 341  Q
    |||| |||| |||||| ||| ||| ||| ||| |||| ||||||||||||||| | | | |||||||||| ||||| |||||   |||||||||||||||    
T  6160580 ccttgtttattgaattacattcaacttaactattccattaactacaattaataagagtattttagtaaataatactaattttatcattgaaatcaacaca 6160481  T
Q  342 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagaga 395  Q
    |||||| ||||| |||| ||||||  ||||  | ||||| |||||||||| ||||    
T  6160480 attaatcattttcttaaaaatcgtacacaagtcgtaaacgactattattttgaga 6160426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 242 - 406
Target Start/End: Original strand, 37506121 - 37506289
Alignment:
Q  242 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatga---tactcattttgctattgaaatcaac 338  Q
    ||||||||| |||||||||| ||| ||| ||||||||||||||||||||||||   |   ||||||||||||   |||| |||||   ||  ||||||||    
T  37506121 ccttatttattgaatttcattcaacttaactactccactaactacaattaataaaagtgttttagtaaatgatagtactaattttatcatcaaaatcaac 37506220  T
Q  339 acaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 406  Q
    ||||||||| ||||  |||| || |||| |  |||||||||| | ||||||||||||| ||||||||||    
T  37506221 acaattaatcatttccttaataaccgtgcatcaaccttaaacgattattatttagagacggagggagta 37506289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 242 - 347
Target Start/End: Complemental strand, 26258061 - 26257956
Alignment:
Q  242 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 341  Q
    ||||||||||||  |||||||||| |||  || || |||||| || |||||||   | | |||||||||||||| ||||||||||||||||||||| |||    
T  26258061 ccttatttactggttttcatccaacttaattattctactaaccacgattaataaaggtattttagtaaatgataatcattttgctattgaaatcaataca 26257962  T
Q  342 attaat 347  Q
    ||||||    
T  26257961 attaat 26257956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 244 - 357
Target Start/End: Original strand, 27721531 - 27721644
Alignment:
Q  244 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaat 343  Q
    ||||||| ||||||| |||||||||| ||| || ||||||||||||||||||  | |||||| ||||| | | | ||||| | ||| ||||||||||| |    
T  27721531 ttatttattgaattttatccaatttaactattctactaactacaattaatattggtactttaataaataaaaataattttaccattaaaatcaacacatt 27721630  T
Q  344 taatattttgttaa 357  Q
    ||||||||| ||||    
T  27721631 taatatttttttaa 27721644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 242 - 406
Target Start/End: Original strand, 52429341 - 52429506
Alignment:
Q  242 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 341  Q
    ||||||||| |||||||||| ||| ||| |||||||||||||||||||||||| | | | |||| ||||||| | | | ||| | || | |||||||  |    
T  52429341 ccttatttaatgaatttcattcaacttaactactccactaactacaattaataagggtattttaataaatgacattaaatttaccatcgtaatcaaccaa 52429440  T
Q  342 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 406  Q
    |||||| ||||  || | ||||||| ||||||||||||| |  || ||||||||| ||||||||||    
T  52429441 attaatcatttccttcataatcgtgcacaaaccttaaacgataataatttagagacggagggagta 52429506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 302 - 389
Target Start/End: Complemental strand, 23169054 - 23168966
Alignment:
Q  302 tttagtaaatgatactcattttgctattgaaatcaacacaattaa-tattttgttaagaatcgtgtacaaaccttaaacaactattatt 389  Q
    ||||||||||| |||| ||||| | |||||||||||||||||||| |||||| |||| ||||||| |||||| |||||| |||| ||||    
T  23169054 tttagtaaatgctactaattttaccattgaaatcaacacaattaattattttcttaataatcgtgcacaaactttaaacgactaatatt 23168966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 229 - 347
Target Start/End: Complemental strand, 14757729 - 14757610
Alignment:
Q  229 ttccactgttatacc-ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgcta 327  Q
    ||||||| ||||||| ||||||| | ||||||||| || ||| ||||| |||||||||||||||||| | |   ||||||||||| |||| |||||        
T  14757729 ttccactattatacccttatttattaaatttcatcgaacttaactacttcactaactacaattaataagagtgttttagtaaatgttactaattttatcg 14757630  T
Q  328 ttgaaatcaacacaattaat 347  Q
    ||||||||||||||||||||    
T  14757629 ttgaaatcaacacaattaat 14757610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 252 - 346
Target Start/End: Complemental strand, 6023760 - 6023666
Alignment:
Q  252 tgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaattaa 346  Q
    |||||||||||||| ||| |||||||| |||||||||||||||   | | ||||||||| | |||| | ||| | ||||||||||||||||||||    
T  6023760 tgaatttcatccaacttaactactccaataactacaattaataaaggtattttagtaaaagctactaaatttaccattgaaatcaacacaattaa 6023666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 302 - 407
Target Start/End: Complemental strand, 35682866 - 35682761
Alignment:
Q  302 tttagtaaatgatactcattttgctattgaaatcaacacaattaatatttt-gttaagaatcgtgtacaaaccttaaacaactattatttagagatggag 400  Q
    |||| ||||||||||| || ||   ||||||||||||||||||||| |||| ||||| ||||||| ||||||| || || |||||||||| ||||||||     
T  35682866 tttaataaatgatactaatgttatcattgaaatcaacacaattaatcttttcgttaaaaatcgtgcacaaacc-tatacgactattattttgagatggaa 35682768  T
Q  401 ggagtat 407  Q
    |||||||    
T  35682767 ggagtat 35682761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 271 - 406
Target Start/End: Complemental strand, 41121917 - 41121778
Alignment:
Q  271 ctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaattaatatttt----gttaagaatcgtgt 366  Q
    |||||||||||||||||||||||| | | | |||||||||| || || ||||| | ||  |||||||||||||||||  |||     |||| ||  |||     
T  41121917 ctactccactaactacaattaataagggtattttagtaaattatgctaattttaccatcaaaatcaacacaattaatcatttcctaattaataaatgtgc 41121818  T
Q  367 acaaaccttaaacaactattatttagagatggagggagta 406  Q
    | ||||||||||||||||||||||||||| ||| ||||||    
T  41121817 ataaaccttaaacaactattatttagagacggaaggagta 41121778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 229 - 293
Target Start/End: Original strand, 6785239 - 6785304
Alignment:
Q  229 ttccactgttatacc-ttatttactgaatttcatccaatttagctactccactaactacaattaat 293  Q
    ||||||| ||||||| ||||||| ||||||||||| || ||| |||||||||||||||||||||||    
T  6785239 ttccactattatacccttatttattgaatttcatcaaacttaactactccactaactacaattaat 6785304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 254 - 378
Target Start/End: Original strand, 28749000 - 28749125
Alignment:
Q  254 aatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaattaat-atttt 352  Q
    |||||||||||| ||| | | || ||||| ||||||||||| | |   ||||||||||| |||| ||||| | ||||||||||||||||||||| ||||     
T  28749000 aatttcatccaacttaacaattctactaattacaattaataagggtgttttagtaaatgctactaattttaccattgaaatcaacacaattaatcatttc 28749099  T
Q  353 gttaagaatcgtgtacaaaccttaaa 378  Q
     |||| ||||||| ||||| ||||||    
T  28749100 cttaataatcgtgcacaaatcttaaa 28749125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 242 - 395
Target Start/End: Complemental strand, 33733383 - 33733230
Alignment:
Q  242 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 341  Q
    ||||||||| |||||||||| | |  || | |||| |||||||||||||||||   | | ||||||||||| || | ||||| | |||||||||||||||    
T  33733383 ccttatttattgaatttcattctacctaaccactctactaactacaattaataaaagtattttagtaaatgttaataattttaccattgaaatcaacaca 33733284  T
Q  342 attaatattttgttaagaatcgtgtacaaaccttaaacaactattatttagaga 395  Q
    || |  ||||  |||| ||||||| |||||| |||||| ||||| |||| ||||    
T  33733283 ataatcatttccttaataatcgtgcacaaactttaaacgactataatttggaga 33733230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 246 - 405
Target Start/End: Original strand, 45331339 - 45331502
Alignment:
Q  246 atttactgaatttcatccaatttagcta---ctccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaa 342  Q
    ||||| |||| ||||||||| ||| |||   ||||| ||||||||||||||| | |   |||||||||||||| | ||||| | ||  ||||||||| ||    
T  45331339 atttattgaacttcatccaacttaactattcctccattaactacaattaataagggtgttttagtaaatgatattaattttaccatcaaaatcaacataa 45331438  T
Q  343 ttaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagt 405  Q
    ||||| ||||| |||| || ||||    |||||||||| |||||||||||||||||||| ||||    
T  45331439 ttaattattttcttaataaccgtgcgtcaaccttaaacgactattatttagagatggagagagt 45331502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 242 - 294
Target Start/End: Complemental strand, 25089207 - 25089155
Alignment:
Q  242 ccttatttactgaatttcatccaatttagctactccactaactacaattaata 294  Q
    ||||||||| |||||||||||||| ||| ||||| ||||||||||||||||||    
T  25089207 ccttatttattgaatttcatccaacttaactacttcactaactacaattaata 25089155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 242 - 294
Target Start/End: Original strand, 35367799 - 35367851
Alignment:
Q  242 ccttatttactgaatttcatccaatttagctactccactaactacaattaata 294  Q
    ||||||||| ||||||||||| || ||| ||||||||||||||||||||||||    
T  35367799 ccttatttattgaatttcatctaacttaactactccactaactacaattaata 35367851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 229 - 347
Target Start/End: Complemental strand, 44707895 - 44707776
Alignment:
Q  229 ttccactgttatacctt-atttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgcta 327  Q
    ||||||| ||||||||| ||||| |||||||||||||| ||| || || ||||||||||||||||||  ||   ||||||||||  |||| |||||   |    
T  44707895 ttccactattatacctttatttattgaatttcatccaacttaactgcttcactaactacaattaataaatgtgttttagtaaatactactaattttatca 44707796  T
Q  328 ttgaaatcaacacaattaat 347  Q
    |||||||||| | |||||||    
T  44707795 ttgaaatcaatataattaat 44707776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 246 - 339
Target Start/End: Original strand, 24880874 - 24880970
Alignment:
Q  246 atttactgaatttcatccaatttag---ctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaaca 339  Q
    ||||| |||||||||||||| |||    ||||||||||||||||||||||||   | | |||||||||||||| | ||||| | |||||||||||||    
T  24880874 atttattgaatttcatccaacttactaactactccactaactacaattaataaaagtattttagtaaatgatattaattttaccattgaaatcaaca 24880970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 302 - 406
Target Start/End: Original strand, 27687298 - 27687404
Alignment:
Q  302 tttagtaaatgatactcattttgctattgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaac-tattatttagagatgga 399  Q
    |||||||||| ||| | ||||| | |||||||||||||||| |||| ||||| |||| ||| ||| ||||||||||||  || ||| ||||||||| |||    
T  27687298 tttagtaaataatattaattttaccattgaaatcaacacaactaatcatttttttaataattgtgcacaaaccttaaaagacttataatttagagacgga 27687397  T
Q  400 gggagta 406  Q
    |||||||    
T  27687398 gggagta 27687404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 481 - 519
Target Start/End: Complemental strand, 52009298 - 52009260
Alignment:
Q  481 aatttgacagcggcttttgggaaagaaagttatattcat 519  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  52009298 aatttgacagcggctattgggaaagaaagttatattcat 52009260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 244 - 293
Target Start/End: Complemental strand, 22856356 - 22856307
Alignment:
Q  244 ttatttactgaatttcatccaatttagctactccactaactacaattaat 293  Q
    ||||||| |||||||||||||  ||| |||||||||||||||||||||||    
T  22856356 ttatttattgaatttcatccagcttaactactccactaactacaattaat 22856307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 52009544 - 52009499
Alignment:
Q  18 atttccatttcccttcttctccaagagcagctttgttctgcaaatg 63  Q
    |||| |||||||||||||||| |||||||||||| |||||||||||    
T  52009544 attttcatttcccttcttctcgaagagcagcttttttctgcaaatg 52009499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 243 - 347
Target Start/End: Original strand, 31154126 - 31154230
Alignment:
Q  243 cttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaa 342  Q
    |||||||||||||||||||| || |||   |||| || ||||||||||||||  || | ||||||| || ||||| |||||   ||| ||||||||||||    
T  31154126 cttatttactgaatttcatcaaacttaagcactctaccaactacaattaataaatgcaatttagtagataatactaattttatcattaaaatcaacacaa 31154225  T
Q  343 ttaat 347  Q
    |||||    
T  31154226 ttaat 31154230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 302 - 395
Target Start/End: Complemental strand, 6267917 - 6267823
Alignment:
Q  302 tttagtaaatgatactcattttgctattgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagaga 395  Q
    ||||||| ||||||||  ||||   ||| ||||||||||||||||| ||||  |||| ||| ||| ||||||||||||| |||||||||| ||||    
T  6267917 tttagtacatgatactagttttatcattaaaatcaacacaattaatcatttctttaaaaatagtgcacaaaccttaaacgactattattttgaga 6267823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 242 - 292
Target Start/End: Original strand, 37539124 - 37539174
Alignment:
Q  242 ccttatttactgaatttcatccaatttagctactccactaactacaattaa 292  Q
    ||||||||| ||||||||||| || ||| |||||| |||||||||||||||    
T  37539124 ccttatttattgaatttcatcaaacttaactactctactaactacaattaa 37539174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 244 - 292
Target Start/End: Complemental strand, 4441722 - 4441674
Alignment:
Q  244 ttatttactgaatttcatccaatttagctactccactaactacaattaa 292  Q
    ||||||| | ||||||||| ||||||  |||||||||||||||||||||    
T  4441722 ttatttattaaatttcatctaatttaattactccactaactacaattaa 4441674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 91; Significance: 7e-44; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 242 - 407
Target Start/End: Complemental strand, 7828042 - 7827876
Alignment:
Q  242 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 341  Q
    ||||||||| | |||||||||||| ||| |||||||||||||||||||||||| | | | |||| ||||||||||| ||||| | |||||||||||||||    
T  7828042 ccttatttattaaatttcatccaacttaactactccactaactacaattaataagggtattttaataaatgatactaattttaccattgaaatcaacaca 7827943  T
Q  342 attaa-tattttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtat 407  Q
    ||||| |||||| |||| ||||||||||||||||||||| | ||||||||||||| |||||||||||    
T  7827942 attaattattttcttaataatcgtgtacaaaccttaaacgattattatttagagacggagggagtat 7827876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 242 - 406
Target Start/End: Complemental strand, 6315893 - 6315728
Alignment:
Q  242 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 341  Q
    ||||||||| |||||||||||||| ||| ||||| |||||||||||||||||| | | | |||||||||||||| | |||||   |||||||| ||||||    
T  6315893 ccttatttattgaatttcatccaacttaactacttcactaactacaattaataagggtattttagtaaatgatattaattttatcattgaaattaacaca 6315794  T
Q  342 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 406  Q
    || ||| ||||  |||| ||||| |||||| |||||||| ||||| ||||||||| ||||||||||    
T  6315793 atcaatcatttccttaataatcgagtacaacccttaaacgactataatttagagacggagggagta 6315728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 244 - 380
Target Start/End: Complemental strand, 8725123 - 8724986
Alignment:
Q  244 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaat 343  Q
    ||||||| |||||||||| ||| ||| |||||||||||||||||||||||| |||   |||||||||||||| | ||||| | |||||||||||||||||    
T  8725123 ttatttattgaatttcattcaagttaactactccactaactacaattaataagtgtgttttagtaaatgatattaattttaccattgaaatcaacacaat 8725024  T
Q  344 taat-attttgttaagaatcgtgtacaaaccttaaaca 380  Q
    |||| ||||  |||| ||||||| ||||||||||||||    
T  8725023 taatcatttctttaataatcgtgcacaaaccttaaaca 8724986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 242 - 406
Target Start/End: Original strand, 40899915 - 40900080
Alignment:
Q  242 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 341  Q
    ||||||||| ||||||||||| || ||| |||||||||||||||||||||||| | |   |||||||||||||||| ||||||| ||  |||||||||||    
T  40899915 ccttatttattgaatttcatctaacttaactactccactaactacaattaataagggtgttttagtaaatgatactaattttgccatcaaaatcaacaca 40900014  T
Q  342 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 406  Q
    |||||| ||||  |||| || |||| | ||||||||||  |||||||||||||||| ||| |||||    
T  40900015 attaatcatttccttaataaccgtgcataaaccttaaatgactattatttagagatagagagagta 40900080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 229 - 406
Target Start/End: Original strand, 8698292 - 8698471
Alignment:
Q  229 ttccactgttatacc-ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgcta 327  Q
    ||||||| ||||||| ||||||| |||||||||||||| ||| | |||||||||||||||||||||| | |   ||| |||||||  ||| ||||| | |    
T  8698292 ttccactattatacccttatttattgaatttcatccaacttaaccactccactaactacaattaataagggtgttttggtaaatgcaactaattttacca 8698391  T
Q  328 ttgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 406  Q
    |||||||||||||||||||| ||||  |||| ||||||| |||||||||||||||| | ||||  |||| ||||||||||    
T  8698392 ttgaaatcaacacaattaatcatttctttaataatcgtgcacaaaccttaaacaacaaatattgtgagacggagggagta 8698471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 243 - 395
Target Start/End: Original strand, 27542793 - 27542946
Alignment:
Q  243 cttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaa 342  Q
    |||||||| ||||||| |||||| ||| |||||||||||||||||||||||| | | | ||||||||||| || | ||||| | ||||||||||||||||    
T  27542793 cttatttattgaattttatccaacttaactactccactaactacaattaataagagtattttagtaaatggtattaattttaccattgaaatcaacacaa 27542892  T
Q  343 ttaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagaga 395  Q
    | ||| ||||  |||| ||||||| ||||||||||||| || || |||||||||    
T  27542893 tcaatcatttccttaataatcgtgcacaaaccttaaacgacaataatttagaga 27542946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 242 - 406
Target Start/End: Complemental strand, 40530340 - 40530175
Alignment:
Q  242 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 341  Q
    ||||||||| | |||||||||||| ||| | |||||||||||||||||||||| | |   ||||||||||| |||| ||||| | |||||||||||||||    
T  40530340 ccttatttatttaatttcatccaacttaaccactccactaactacaattaataagggtgttttagtaaatgctactaattttaccattgaaatcaacaca 40530241  T
Q  342 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 406  Q
    |||||| ||||| |||| ||||||| ||| ||||||||| || | ||||  |||| ||||||||||    
T  40530240 attaatcattttcttaataatcgtgcacagaccttaaacgacaaatattgtgagacggagggagta 40530175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 229 - 377
Target Start/End: Original strand, 41496063 - 41496213
Alignment:
Q  229 ttccactgttatacctt-atttactgaatttcatccaatttagctactccactaactacaattaat-atgtggactttagtaaatgatactcattttgct 326  Q
    ||||||| ||||||||| ||||| || ||||||||||||||| ||||||||||||||||||||||| |||  |  |||| ||||||  ||| ||||| |     
T  41496063 ttccactattatacctttatttattgcatttcatccaatttaactactccactaactacaattaataatgatg-ttttactaaatgcaactaattttacc 41496161  T
Q  327 attgaaatcaacacaattaa-tattttgttaagaatcgtgtacaaaccttaa 377  Q
    |||||||||||||||||||| |||||| |||| |||||||||||||||||||    
T  41496162 attgaaatcaacacaattaattatttttttaataatcgtgtacaaaccttaa 41496213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 242 - 387
Target Start/End: Complemental strand, 6753774 - 6753629
Alignment:
Q  242 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 341  Q
    ||||||||| | |||||||||||| ||| |||||||||||||||||||||||| | | | |||||||||||||||| ||||| | |||||||| || | |    
T  6753774 ccttatttattaaatttcatccaacttaactactccactaactacaattaataagggtattttagtaaatgatactaattttaccattgaaattaata-a 6753676  T
Q  342 attaat-attttgttaagaatcgtgtacaaaccttaaacaactatta 387  Q
    |||||| ||||| |||| ||||||| | ||||||||||| |||||||    
T  6753675 attaatcattttcttaataatcgtgcataaaccttaaacgactatta 6753629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 242 - 406
Target Start/End: Original strand, 4818548 - 4818713
Alignment:
Q  242 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 341  Q
    ||||||||| ||||||||||| || |||   |||||||||||||||||||||| | |   ||||||||||| |||| ||||| | |||||||||||||||    
T  4818548 ccttatttattgaatttcatctaacttaatcactccactaactacaattaataagggtgttttagtaaatgctactaattttacaattgaaatcaacaca 4818647  T
Q  342 attaa-tattttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 406  Q
    ||||| |||||  |||| ||||||| ||||||||||||| || | ||||  |||| ||||||||||    
T  4818648 attaattatttccttaataatcgtgcacaaaccttaaacgacaaatattgtgagacggagggagta 4818713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 244 - 347
Target Start/End: Original strand, 27580599 - 27580702
Alignment:
Q  244 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaat 343  Q
    ||||||| | |||||||| ||| ||| |||||||||||||||||||||||| | | | |||||||||||||| | ||||| | |||||||||||||||||    
T  27580599 ttatttaattaatttcattcaacttaactactccactaactacaattaataagggtattttagtaaatgatattaattttaccattgaaatcaacacaat 27580698  T
Q  344 taat 347  Q
    ||||    
T  27580699 taat 27580702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 244 - 393
Target Start/End: Original strand, 21060629 - 21060779
Alignment:
Q  244 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaat 343  Q
    ||||||| ||||||| |||||| ||| |||||||||||||||||||||||| | | | |||||||||| ||||| ||||| | ||  |||| ||||||||    
T  21060629 ttatttattgaattttatccaacttaactactccactaactacaattaataagagtattttagtaaataatactaattttaccatcaaaataaacacaat 21060728  T
Q  344 taat-attttgttaagaatcgtgtacaaaccttaaacaactattatttaga 393  Q
    |||| ||||   ||| || |||| | ||||||||||| |||||||||||||    
T  21060729 taatcatttccctaataaccgtgcataaaccttaaacgactattatttaga 21060779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 242 - 339
Target Start/End: Original strand, 6754026 - 6754123
Alignment:
Q  242 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaaca 339  Q
    ||||||||| |||||||||||||| ||| |||||||||||||||||||||||| | |   |||||||||||| | | ||||| |||||||||||||||    
T  6754026 ccttatttattgaatttcatccaacttaactactccactaactacaattaataagagtgttttagtaaatgacattaattttactattgaaatcaaca 6754123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 242 - 413
Target Start/End: Complemental strand, 1248720 - 1248548
Alignment:
Q  242 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 341  Q
    ||||||| | ||||||| || ||| ||| ||||| |||||||||||||||||| | | | |||||||||||||| | ||||| | ||||||||||||| |    
T  1248720 ccttattaattgaattttattcaacttaactacttcactaactacaattaataagggtattttagtaaatgatattaattttaccattgaaatcaacata 1248621  T
Q  342 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtattatcta 413  Q
    |||||| ||||  |||| || |||| ||||| ||||||| |||||| |||| ||| ||| | ||||| |||||    
T  1248620 attaataatttccttaataaccgtgcacaaatcttaaacgactattttttaaagacggatgaagtatcatcta 1248548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 242 - 384
Target Start/End: Complemental strand, 2232185 - 2232046
Alignment:
Q  242 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 341  Q
    ||||||||| |||||||||||||| ||| ||||||||||||    |||||||| | |   |||| |||||| |||| ||||| | |||||||||||||||    
T  2232185 ccttatttattgaatttcatccaacttaactactccactaa----aattaataagagttttttaataaatgctactaattttaccattgaaatcaacaca 2232090  T
Q  342 attaat-attttgttaagaatcgtgtacaaaccttaaacaacta 384  Q
    |||| | ||||| |||| ||||||| ||||||||||||| ||||    
T  2232089 attattcattttcttaataatcgtgcacaaaccttaaacgacta 2232046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 229 - 389
Target Start/End: Original strand, 31655036 - 31655198
Alignment:
Q  229 ttccactgttatacc-ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgcta 327  Q
    ||||||| ||||||| ||||||| |||||||||| |||  ||  ||||||||||||||||||||||| |   | | |||||||||||| | ||||| | |    
T  31655036 ttccactattatacccttatttattgaatttcattcaacataattactccactaactacaattaataaggatattatagtaaatgatattaattttacca 31655135  T
Q  328 ttgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatt 389  Q
    |||||||||||||||||||| ||||  |||| ||||||  |||||| |||||| |||| ||||    
T  31655136 ttgaaatcaacacaattaatcatttctttaataatcgtacacaaactttaaacgactaatatt 31655198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 242 - 347
Target Start/End: Complemental strand, 22848500 - 22848395
Alignment:
Q  242 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 341  Q
    ||||||||| ||||||||||||||| || |||||||| ||||||||||||||| | |   |||| |||||  || | ||||| |||||||||||||||||    
T  22848500 ccttatttattgaatttcatccaatctaactactccattaactacaattaataagggtgttttaataaatactattaattttactattgaaatcaacaca 22848401  T
Q  342 attaat 347  Q
    ||||||    
T  22848400 attaat 22848395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 302 - 389
Target Start/End: Original strand, 9515803 - 9515891
Alignment:
Q  302 tttagtaaatgatactcattttgctattgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatt 389  Q
    |||||||||||||||| ||||| | ||||||||||||||||||||| ||| | |||| ||||||| ||||||||||||| |||| ||||    
T  9515803 tttagtaaatgatactaattttaccattgaaatcaacacaattaatcattatcttaataatcgtgcacaaaccttaaacgactaatatt 9515891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 244 - 347
Target Start/End: Original strand, 4441020 - 4441123
Alignment:
Q  244 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaat 343  Q
    ||||||| |||||||||||||||||| ||||||||||||||||||||||||     | |||||||||| ||| | |||||   ||| |||||||||||||    
T  4441020 ttatttattgaatttcatccaatttaactactccactaactacaattaataaaaatattttagtaaataatattaattttatcattaaaatcaacacaat 4441119  T
Q  344 taat 347  Q
    ||||    
T  4441120 taat 4441123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 327 - 408
Target Start/End: Original strand, 843519 - 843601
Alignment:
Q  327 attgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtatt 408  Q
    ||||||||||||| ||||||| ||||| |||| ||||||| ||||||||||||||| |||||||  |||| ||||||||||||    
T  843519 attgaaatcaacaaaattaatcattttcttaataatcgtgcacaaaccttaaacaattattattgtgagacggagggagtatt 843601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 242 - 406
Target Start/End: Original strand, 41478824 - 41478989
Alignment:
Q  242 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtgg-actttagtaaatgatactcattttgctattgaaatcaacac 340  Q
    ||||||||| ||||||||||| || ||| ||| |||| ||||| ||||||| | | |  | |||||||||||| ||| ||||| | |||||||| | |||    
T  41478824 ccttatttattgaatttcatctaacttaacta-tccattaactgcaattaacaagggatattttagtaaatgacactaattttaccattgaaataagcac 41478922  T
Q  341 aattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 406  Q
    ||||||| ||||| |||| ||||| | |||||||||| || |||||||||||||||| ||| |||||    
T  41478923 aattaatcattttcttaaaaatcgcgcacaaaccttagacgactattatttagagatagagagagta 41478989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 278 - 406
Target Start/End: Original strand, 32440174 - 32440303
Alignment:
Q  278 actaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaattaat-attttgttaagaatcgtgtacaaacctta 376  Q
    ||||| ||||||||||| | | | |||||||||||||| | |||||   |||||||| |||||||||||| ||||  |||| |||| || |||||||||     
T  32440174 actaagtacaattaataagggtattttagtaaatgatattaattttatcattgaaattaacacaattaatcatttctttaaaaatcatgcacaaaccttt 32440273  T
Q  377 aacaactattatttagagatggagggagta 406  Q
    ||| |||||||||| |||| ||||||||||    
T  32440274 aacgactattattttgagacggagggagta 32440303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 279 - 406
Target Start/End: Complemental strand, 38508266 - 38508138
Alignment:
Q  279 ctaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaa 377  Q
    |||||||||||||||| | | | |||| | | ||||||| ||||| | |||||||| |||||||||||| ||||| |||| ||||| | ||||| |||||    
T  38508266 ctaactacaattaataagagtattttaatgagtgatactaattttaccattgaaattaacacaattaatcattttcttaaaaatcgagcacaaatcttaa 38508167  T
Q  378 acaactattatttagagatggagggagta 406  Q
    || |||||||||| |||| ||| ||||||    
T  38508166 acgactattattttgagacggatggagta 38508138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 242 - 403
Target Start/End: Original strand, 11904202 - 11904365
Alignment:
Q  242 ccttatttactgaatttcatccaatttagctactccactaactacaatt-aatatgtggactttagtaaatgatactcattttgctattgaaatcaacac 340  Q
    ||||| ||| ||| ||| ||| |||||| ||||||||| |||||||||| |||| | | | |||||||||||||| | |||||  ||||||| |||| ||    
T  11904202 ccttaattattgatttttatcgaatttaactactccaccaactacaattaaataagagtattttagtaaatgatattaattttattattgaactcaatac 11904301  T
Q  341 aattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggaggga 403  Q
    ||||||| | ||| ||||  |||||| |||||| |||||| ||||||| ||| ||| |||||||    
T  11904302 aattaatcactttcttaaagatcgtgcacaaacattaaacgactattaattaaagagggaggga 11904365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 242 - 406
Target Start/End: Complemental strand, 30512802 - 30512636
Alignment:
Q  242 ccttatttactgaatttcatccaatttagctactccactaactacaa-ttaatatgtggactttagtaaatgatactcattttgctattgaaatcaacac 340  Q
    ||||||||| | |||||||||||| ||| ||| | |||||||||||  |||||| | | |  ||||||||||||  | ||||| | ||||||||||| ||    
T  30512802 ccttatttattaaatttcatccaacttaactatttcactaactacatgttaataagagtatcttagtaaatgatgttaattttaccattgaaatcaatac 30512703  T
Q  341 aattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 406  Q
    ||||||| ||||  |||| ||||||| | |||| ||| || ||||| ||||||||| ||||||||||    
T  30512702 aattaatcatttccttaataatcgtgcataaactttatacgactataatttagagacggagggagta 30512636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 242 - 406
Target Start/End: Complemental strand, 30553142 - 30552976
Alignment:
Q  242 ccttatttactgaatttcatccaatttagctactccactaactacaa-ttaatatgtggactttagtaaatgatactcattttgctattgaaatcaacac 340  Q
    ||||||||| | |||||||||||| ||| ||| | |||||||||||  |||||| | | |  ||||||||||||  | ||||| | ||||||||||| ||    
T  30553142 ccttatttattaaatttcatccaacttaactatttcactaactacatgttaataagagtatcttagtaaatgatgttaattttaccattgaaatcaatac 30553043  T
Q  341 aattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 406  Q
    ||||||| ||||  |||| ||||||| | |||| ||| || ||||| ||||||||| ||||||||||    
T  30553042 aattaatcatttccttaataatcgtgcataaactttatacgactataatttagagacggagggagta 30552976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 242 - 406
Target Start/End: Original strand, 41492299 - 41492464
Alignment:
Q  242 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtgg-actttagtaaatgatactcattttgctattgaaatcaacac 340  Q
    ||||||||| ||||||||||| || ||| ||| |||| |||||||| |||| | | |  | |||||||||||  ||| ||||| | |||||||| | |||    
T  41492299 ccttatttattgaatttcatctaacttaacta-tccattaactacatttaacaagggatattttagtaaatgtcactaattttaccattgaaataagcac 41492397  T
Q  341 aattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 406  Q
    ||||||| ||||| |||| ||||| | |||||||||| || ||||||||||| |||||||| |||||    
T  41492398 aattaatcattttcttaaaaatcgcgcacaaaccttagacgactattatttaaagatggagagagta 41492464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 242 - 347
Target Start/End: Original strand, 29374339 - 29374444
Alignment:
Q  242 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 341  Q
    ||||||||| ||||||| || ||||||| ||||||||||||||||||||||||   |   ||||||||||| || | |||||   ||||||||||||| |    
T  29374339 ccttatttattgaattttattcaatttaactactccactaactacaattaataaaggtcttttagtaaatgctattaattttatcattgaaatcaacata 29374438  T
Q  342 attaat 347  Q
    ||||||    
T  29374439 attaat 29374444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 243 - 379
Target Start/End: Complemental strand, 42803735 - 42803598
Alignment:
Q  243 cttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaa 342  Q
    |||||||| |||||||||||||| ||| | |||||| |||||||||||||||   |   ||||||||||  |||| ||||| | |||||||| |||||||    
T  42803735 cttatttattgaatttcatccaacttaaccactccattaactacaattaataatggtgttttagtaaatactactaattttacaattgaaatgaacacaa 42803636  T
Q  343 ttaa-tattttgttaagaatcgtgtacaaaccttaaac 379  Q
    |||| |||||  || | ||||||| | |||||||||||    
T  42803635 ttaattatttctttgataatcgtgcataaaccttaaac 42803598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 244 - 384
Target Start/End: Complemental strand, 15818596 - 15818453
Alignment:
Q  244 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaa--atgatactcattttgctattgaaatcaacaca 341  Q
    ||||||| | |||||||||||||||| |||||||||| | |||||||||||   |   ||||||||  ||| |||| ||||| | |||||||||||||||    
T  15818596 ttatttattaaatttcatccaatttaactactccactgattacaattaataaaggtgttttagtaaatatgctactaattttaccattgaaatcaacaca 15818497  T
Q  342 att-aatattttgttaagaatcgtgtacaaaccttaaacaacta 384  Q
    ||| || ||||  |||| ||||||| | ||||||||||| ||||    
T  15818496 attaaacatttccttaataatcgtgcataaaccttaaacgacta 15818453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 243 - 400
Target Start/End: Original strand, 29570390 - 29570548
Alignment:
Q  243 cttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaa 342  Q
    |||||||| |||||||||||||| ||| ||| |||| |||||||||||||||   |   ||||| ||||  || | |||||   ||| ||||||||||||    
T  29570390 cttatttattgaatttcatccaacttaactattccattaactacaattaataaaggtgttttagcaaatactaataattttaacattaaaatcaacacaa 29570489  T
Q  343 ttaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggag 400  Q
    ||||| ||||  |||| ||||||| ||||| ||||||| |||| ||||  |||||||||    
T  29570490 ttaatcatttctttaataatcgtgcacaaatcttaaacgactaatattgtgagatggag 29570548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 302 - 390
Target Start/End: Complemental strand, 37184135 - 37184046
Alignment:
Q  302 tttagtaaatgatactcattttgctattgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattattt 390  Q
    |||||||||||||| | ||||| | |||||||||||| |||||||| ||||| |||| |||| || ||||| |||||| | |||||||||    
T  37184135 tttagtaaatgatattaattttaccattgaaatcaactcaattaatcatttttttaaaaatcttgcacaaaacttaaagatctattattt 37184046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 242 - 294
Target Start/End: Original strand, 19929943 - 19929995
Alignment:
Q  242 ccttatttactgaatttcatccaatttagctactccactaactacaattaata 294  Q
    ||||||||| |||||||||||||| ||| ||| | ||||||||||||||||||    
T  19929943 ccttatttattgaatttcatccaacttaactatttcactaactacaattaata 19929995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 369 - 406
Target Start/End: Original strand, 5282467 - 5282504
Alignment:
Q  369 aaaccttaaacaactattatttagagatggagggagta 406  Q
    |||||||||||||||||||||| ||| |||||||||||    
T  5282467 aaaccttaaacaactattattttgagctggagggagta 5282504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 302 - 347
Target Start/End: Original strand, 5731833 - 5731878
Alignment:
Q  302 tttagtaaatgatactcattttgctattgaaatcaacacaattaat 347  Q
    ||||||||||||||| ||||||| |||| |||| ||||||||||||    
T  5731833 tttagtaaatgatacacattttgttattaaaatgaacacaattaat 5731878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 254 - 379
Target Start/End: Original strand, 29856056 - 29856180
Alignment:
Q  254 aatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaattaatattttg 353  Q
    |||| ||| ||| ||| |||||||||||||||||||||||| | | | ||||| || ||||| | |||||   |||||||||||| |||||  |||||      
T  29856056 aattgcattcaacttaactactccactaactacaattaataagagtattttagcaagtgatattaattttatcattgaaatcaacgcaatt-ttatttcc 29856154  T
Q  354 ttaagaatcgtgtacaaaccttaaac 379  Q
    |||| ||||||| ||||| |||||||    
T  29856155 ttaataatcgtgcacaaatcttaaac 29856180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 331 - 407
Target Start/End: Complemental strand, 42922894 - 42922818
Alignment:
Q  331 aaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtat 407  Q
    ||||||||||||||||| ||||| |||| |||| || ||||| ||||||| ||||| |||||||| ||| ||||||||    
T  42922894 aaatcaacacaattaatcattttcttaataatcatgcacaaatcttaaacgactataatttagagttgg-gggagtat 42922818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 370 - 406
Target Start/End: Complemental strand, 2588055 - 2588019
Alignment:
Q  370 aaccttaaacaactattatttagagatggagggagta 406  Q
    |||||||||| ||||||||||||||| ||||||||||    
T  2588055 aaccttaaacgactattatttagagacggagggagta 2588019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 255 - 315
Target Start/End: Complemental strand, 38161515 - 38161455
Alignment:
Q  255 atttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgata 315  Q
    ||||||||||| ||| |||||||||||||||| ||||||| |   | ||||||||||||||    
T  38161515 atttcatccaacttaactactccactaactacgattaataaggatattttagtaaatgata 38161455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 75; Significance: 3e-34; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 242 - 406
Target Start/End: Complemental strand, 37695784 - 37695618
Alignment:
Q  242 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 341  Q
    ||||||||| ||||||||||| || ||| |||||||||||||||||||||||| | |   |||||||||||||| | ||||| | |||||||||||||||    
T  37695784 ccttatttattgaatttcatctaacttaactactccactaactacaattaataagggtgttttagtaaatgatattaattttaccattgaaatcaacaca 37695685  T
Q  342 attaat-attttgttaagaatcgtgtac-aaaccttaaacaactattatttagagatggagggagta 406  Q
    |||||| ||||  |||| ||||||| || ||||||||||| ||||||||||||||| ||||||||||    
T  37695684 attaatcatttccttaataatcgtgcacaaaaccttaaacgactattatttagagacggagggagta 37695618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 242 - 407
Target Start/End: Original strand, 19823008 - 19823174
Alignment:
Q  242 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 341  Q
    ||||||||| |||||||||||||| ||| ||| |||||||||||||||||||| | |   |||||||||||||||| ||| | | ||  |||||||||||    
T  19823008 ccttatttattgaatttcatccaacttaactattccactaactacaattaataagggtgttttagtaaatgatactaattctaccatcaaaatcaacaca 19823107  T
Q  342 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtat 407  Q
    |||||| ||||  |||| ||||||| ||||||||||||||||||| |||||||||  ||||||||||    
T  19823108 attaatcatttccttaataatcgtgcacaaaccttaaacaactataatttagagacagagggagtat 19823174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 242 - 395
Target Start/End: Complemental strand, 30190778 - 30190624
Alignment:
Q  242 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 341  Q
    ||||||| | |||||||||||||| ||| |||||||||||||||||||||||| | | | |||||||||||||||| ||||| | |||||||||||||||    
T  30190778 ccttattaattgaatttcatccaacttaactactccactaactacaattaataagggtattttagtaaatgatactaattttaccattgaaatcaacaca 30190679  T
Q  342 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagaga 395  Q
    |||||| ||||  || | || |||| ||||||||||||| |||||| ||||||||    
T  30190678 attaatcatttccttcataaccgtgcacaaaccttaaacgactattttttagaga 30190624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 242 - 406
Target Start/End: Original strand, 36476581 - 36476746
Alignment:
Q  242 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 341  Q
    ||||||||| ||||||||||| || ||| |||||| ||||||||||||||||| | | | |||||||||||||| | ||||| | |||| ||||||||||    
T  36476581 ccttatttattgaatttcatcaaacttaactactctactaactacaattaataagggtattttagtaaatgatattaattttaccattgcaatcaacaca 36476680  T
Q  342 attaa-tattttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 406  Q
    || || |||||| |||| || |||| |||||||||||||||| || ||||||||| ||||||||||    
T  36476681 atcaattattttcttaataaccgtgaacaaaccttaaacaacaataatttagagacggagggagta 36476746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 229 - 379
Target Start/End: Complemental strand, 43253995 - 43253843
Alignment:
Q  229 ttccactgttatacc-ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgcta 327  Q
    ||||||| ||||||| ||||||| |||||||||||| | ||| |||||||||||||||||||||||| | |   ||||||||||| |||| ||||| | |    
T  43253995 ttccactattatacccttatttaatgaatttcatcccacttaactactccactaactacaattaataagggtgttttagtaaatgctactaattttacca 43253896  T
Q  328 ttgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaac 379  Q
    |||||||||||||||||||| ||||  |||| ||||||| |||||||||||||    
T  43253895 ttgaaatcaacacaattaatcatttccttaataatcgtgcacaaaccttaaac 43253843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 244 - 406
Target Start/End: Complemental strand, 29024081 - 29023919
Alignment:
Q  244 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaat 343  Q
    ||||||| |||||||||||||| |||  ||||||||||||||||||||||| |  |  |||||||||||||||| ||||| | ||  |||||||||||||    
T  29024081 ttatttattgaatttcatccaacttaattactccactaactacaattaataagatgt-tttagtaaatgatactaattttaccatcaaaatcaacacaat 29023983  T
Q  344 taat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 406  Q
    |||| ||||| |||| ||||||| | ||||||||||| ||||||| |||| || ||||||||||    
T  29023982 taatcatttttttaataatcgtgcataaaccttaaacgactattaattagtgacggagggagta 29023919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 229 - 406
Target Start/End: Complemental strand, 36460548 - 36460369
Alignment:
Q  229 ttccactgttatacc-ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgcta 327  Q
    ||||||| ||||||| ||||||| |||||||||||||| |||  ||||||| ||||||||||||||| |   | |||| |||||| |||| ||||| |||    
T  36460548 ttccactattatacccttatttattgaatttcatccaacttaattactccattaactacaattaataagaatattttaataaatgttactaattttacta 36460449  T
Q  328 ttgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 406  Q
    ||||||| |||||||||||| ||||| |||| ||||||| |||||| |||||| |||| ||||   ||||||||||||||    
T  36460448 ttgaaattaacacaattaataattttcttaataatcgtgcacaaactttaaacgactaatattgtaagatggagggagta 36460369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 229 - 406
Target Start/End: Original strand, 44301545 - 44301724
Alignment:
Q  229 ttccactgttatac-cttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgcta 327  Q
    ||||||| |||||| |||||||| |||||||||||||| ||| |||||||||||| ||||||| ||| | | | |||||||||||||||| |||||   |    
T  44301545 ttccactattatactcttatttattgaatttcatccaacttaactactccactaattacaattgataagggtattttagtaaatgatactaattttatca 44301644  T
Q  328 ttgaaatcaacacaatt-aatattttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 406  Q
    |||||||||||| |||| |||||||  |||| | ||| | ||||||||||||| || ||||||| |||| ||||||||||    
T  44301645 ttgaaatcaacataattaaatatttccttaaaagtcgggcacaaaccttaaacgaccattattttgagacggagggagta 44301724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 243 - 407
Target Start/End: Original strand, 37311948 - 37312113
Alignment:
Q  243 cttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaa 342  Q
    |||||||| ||||||||||  |||||| |||||||||||||||||||||||| | |   ||||||||||| |||| ||||| | ||||||||||||||||    
T  37311948 cttatttattgaatttcattaaatttaactactccactaactacaattaataagggttttttagtaaatgctactaattttaccattgaaatcaacacaa 37312047  T
Q  343 ttaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtat 407  Q
    ||||| ||||  |||| ||||||| | ||||||||||| |||| ||||  |||| | |||||||||    
T  37312048 ttaatcatttccttaataatcgtgcataaaccttaaacgactaatattgtgagacgtagggagtat 37312113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 246 - 395
Target Start/End: Complemental strand, 24569214 - 24569064
Alignment:
Q  246 atttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaatta 345  Q
    ||||| |||||||||| ||| ||| |||||||||||||||||||||||| | | | |||||||||| ||| | ||||| | |||||||||||||||||||    
T  24569214 atttaatgaatttcattcaacttaactactccactaactacaattaataagggtattttagtaaataatattaattttaccattgaaatcaacacaatta 24569115  T
Q  346 at-attttgttaagaatcgtgtacaaaccttaaacaactattatttagaga 395  Q
    || ||||| |||| ||||||| | ||| ||||| | ||||| |||||||||    
T  24569114 atcattttcttaataatcgtgcataaatcttaagcgactataatttagaga 24569064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 254 - 406
Target Start/End: Original strand, 38795353 - 38795506
Alignment:
Q  254 aatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaattaat-atttt 352  Q
    |||||||||||| ||| | ||||||| |||||||||||||| | | | ||  |||||||||||| ||||| | |||||||| |||||||||||| ||||     
T  38795353 aatttcatccaacttaacaactccaccaactacaattaataagggcatttgggtaaatgatactaattttaccattgaaataaacacaattaatcatttc 38795452  T
Q  353 gttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 406  Q
     ||||  |||||| |||||| |||||| |||||||||| |||||||||||||||    
T  38795453 cttaaatatcgtgcacaaacattaaacgactattattttgagatggagggagta 38795506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 229 - 406
Target Start/End: Complemental strand, 8679186 - 8679007
Alignment:
Q  229 ttccactgttatacc-ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgcta 327  Q
    ||||||| ||||||| ||||||| |||||||||||||| |||  || | ||||||||| |||||||| |     ||||||||||| |||| ||||| | |    
T  8679186 ttccactattatacccttatttattgaatttcatccaacttaattaattcactaactataattaataaggatcttttagtaaatgctactaattttacca 8679087  T
Q  328 ttgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 406  Q
    |||||||||||||||||||| ||||  |||| ||||||| | ||| ||||||| ||||| ||||||||| ||||||||||    
T  8679086 ttgaaatcaacacaattaatcatttccttaataatcgtgcataaatcttaaacgactataatttagagacggagggagta 8679007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 242 - 395
Target Start/End: Complemental strand, 10366767 - 10366606
Alignment:
Q  242 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgt-------ggactttagtaaatgatactcattttgctattgaaat 334  Q
    ||||||||| |||||||||||||| ||| ||||| ||||||||||||||||||  |       |   |||| ||||||||||| ||||| | ||||||||    
T  10366767 ccttatttattgaatttcatccaacttaactacttcactaactacaattaataattaataagagtgttttaataaatgatactaattttaccattgaaat 10366668  T
Q  335 caacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagaga 395  Q
    ||||||||||||| ||||| |||| ||||||| ||||||||||||| ||| |||||||||||    
T  10366667 caacacaattaatcattttcttaataatcgtgcacaaaccttaaacgactgttatttagaga 10366606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 242 - 390
Target Start/End: Complemental strand, 12736690 - 12736541
Alignment:
Q  242 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 341  Q
    ||||||||| ||||||| |||||| ||| ||||| |||||| ||||||||||| | | | | |||||||||||||| |||||   |||  ||||||||||    
T  12736690 ccttatttattgaattttatccaaattaactactacactaagtacaattaataagggtattgtagtaaatgatactaattttatcattagaatcaacaca 12736591  T
Q  342 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattattt 390  Q
    |||||| ||||  |||| ||||||| |||||| |||||||||||||||||    
T  12736590 attaatcatttccttaaaaatcgtgcacaaactttaaacaactattattt 12736541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 242 - 406
Target Start/End: Complemental strand, 5323055 - 5322892
Alignment:
Q  242 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 341  Q
    ||||||||| ||||||||||| || ||| |||||  ||||| || |||||||| ||| | |||||||||||||| | |||||   | ||||||||||| |    
T  5323055 ccttatttattgaatttcatcaaacttaactactttactaattataattaataagtgtattttagtaaatgatattaattttatcactgaaatcaacata 5322956  T
Q  342 attaatattttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 406  Q
    ||||||  ||| |||| ||||||| ||||||||||||||||||| ||||| ||| |||| |||||    
T  5322955 attaatcattt-ttaataatcgtgcacaaaccttaaacaactataatttaaagacggagtgagta 5322892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 244 - 395
Target Start/End: Original strand, 11905821 - 11905973
Alignment:
Q  244 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaat 343  Q
    ||||||| |||||||||||||| ||| | |||||| ||||||||||||||| | |  ||||||||||||||||| |||||   ||  |||| ||||||||    
T  11905821 ttatttattgaatttcatccaacttaacaactccattaactacaattaataagggtgctttagtaaatgatactaattttatcatcaaaattaacacaat 11905920  T
Q  344 taat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagaga 395  Q
    |||| ||||| |||| ||||||| | |||| |||||| | |||||||||||||    
T  11905921 taatcattttcttaataatcgtgcataaactttaaacgagtattatttagaga 11905973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 242 - 395
Target Start/End: Original strand, 45710847 - 45711001
Alignment:
Q  242 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 341  Q
    ||||||||| |||| ||||||||| ||| ||||||||||||||||||||||||   |   |||||||||||||| | ||||| | ||  ||||||||| |    
T  45710847 ccttatttattgaacttcatccaacttaactactccactaactacaattaataaaagtgttttagtaaatgatattaattttaccatcaaaatcaacata 45710946  T
Q  342 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagaga 395  Q
    |||||| ||||| |||| || |||| |  |||||||||| |||||||||||||||    
T  45710947 attaatcattttcttaacaaccgtgcatcaaccttaaacgactattatttagaga 45711001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 244 - 408
Target Start/End: Original strand, 37497491 - 37497656
Alignment:
Q  244 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaat 343  Q
    ||||||| |||||||||||||| ||| ||||||||||||||||| |||| |   |   |||||||||||||||| ||||| | ||  |||||||||||||    
T  37497491 ttatttattgaatttcatccaacttaactactccactaactacagttaacaacggtgttttagtaaatgatactaattttaccatcaaaatcaacacaat 37497590  T
Q  344 taat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtatt 408  Q
     ||| ||||  |||| ||||||| | ||| ||||||| | ||||||||||||| ||| ||||||||    
T  37497591 aaatcatttccttaataatcgtgcataaatcttaaacgattattatttagagacggatggagtatt 37497656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 278 - 400
Target Start/End: Original strand, 49830162 - 49830286
Alignment:
Q  278 actaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaattaat--attttgttaagaatcgtgtacaaacctt 375  Q
    |||||||||||||||||   | | |||||||||||||| | ||||| |||||||||||||||||||||||   |||| |||| ||||||| |||||| ||    
T  49830162 actaactacaattaataatggtattttagtaaatgatattaattttactattgaaatcaacacaattaatcattttttttaataatcgtgcacaaacgtt 49830261  T
Q  376 aaacaactattatttagagatggag 400  Q
    |||| ||||| ||||||||| ||||    
T  49830262 aaacgactataatttagagacggag 49830286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 229 - 408
Target Start/End: Complemental strand, 51838091 - 51837911
Alignment:
Q  229 ttccactgttatacc-ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgcta 327  Q
    ||||||| ||||||| ||||||| |||||||||| |||  || ||||||||||| |||||| ||||| | | | |||||||||||||| | |||||   |    
T  51838091 ttccactattatacccttatttaatgaatttcattcaacgtaactactccactagctacaactaataagggtattttagtaaatgatattaattttatca 51837992  T
Q  328 ttgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtatt 408  Q
    |||||||||||||||||||| ||||  |||| | || || ||||||||||||  ||||| ||||||||| || |||||||||    
T  51837991 ttgaaatcaacacaattaatcatttacttaatactcatgcacaaaccttaaatgactataatttagagacgg-gggagtatt 51837911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 242 - 407
Target Start/End: Original strand, 1778640 - 1778805
Alignment:
Q  242 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 341  Q
    ||||||||| |||||||||||||| ||| |||||||||||||||||| ||||| |     |||||||||||  | | |||||   |||||||||||||||    
T  1778640 ccttatttattgaatttcatccaacttatctactccactaactacaa-taataaggatgttttagtaaatgtcattaattttatcattgaaatcaacaca 1778738  T
Q  342 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtat 407  Q
    |||||| ||||  |||| |||| || ||||||||||||| |||| ||||  |||| |||||||||||    
T  1778739 attaatcatttccttaataatcatgcacaaaccttaaacgactaatattgtgagacggagggagtat 1778805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 244 - 381
Target Start/End: Complemental strand, 28690898 - 28690760
Alignment:
Q  244 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaat 343  Q
    ||||||| |||||||||||||| ||| |||   ||||||||||||||||||     | |||||||||||||| | ||||| |  ||||||||||||||||    
T  28690898 ttatttattgaatttcatccaacttaactatctcactaactacaattaataaagatattttagtaaatgatattaattttaccgttgaaatcaacacaat 28690799  T
Q  344 taat-attttgttaagaatcgtgtacaaaccttaaacaa 381  Q
    |||| ||||  |||| ||||||| |||||||||||||||    
T  28690798 taatcatttctttaataatcgtgcacaaaccttaaacaa 28690760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 252 - 393
Target Start/End: Original strand, 43719274 - 43719415
Alignment:
Q  252 tgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaattaat-att 350  Q
    |||||| ||||||||||| |||||||||||||||||||||||| |     || ||| ||||||| | ||||| | ||| ||||||||||||||||| |||    
T  43719274 tgaattccatccaatttaactactccactaactacaattaataaggatgtttcagtgaatgata-taattttaccattaaaatcaacacaattaatcatt 43719372  T
Q  351 ttgttaagaatcgtgtacaaaccttaaacaactattatttaga 393  Q
    || ||||  ||||||||||||| |||| | |||||||||||||    
T  43719373 ttattaatgatcgtgtacaaactttaaccgactattatttaga 43719415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 244 - 404
Target Start/End: Original strand, 19611908 - 19612068
Alignment:
Q  244 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaat 343  Q
    ||||||| ||||||||||| || ||| ||||||||||||| |||||||||| |   | |||||||||| ||| | |||||   |||||||||||||||||    
T  19611908 ttatttattgaatttcatcaaacttaactactccactaacaacaattaataaggatattttagtaaattata-taattttaacattgaaatcaacacaat 19612006  T
Q  344 taat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggag 404  Q
    |||| | ||| |||| ||||||  |||||| |||||||| |||||| | |||| ||||||||    
T  19612007 taatcactttcttaaaaatcgtacacaaactttaaacaattattatctcgagacggagggag 19612068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 244 - 378
Target Start/End: Original strand, 11632080 - 11632214
Alignment:
Q  244 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaat 343  Q
    ||||||| |||||||||||||| ||| ||  ||||||||||||||||||||   |   ||||||||||  |||| ||||| |  ||||||||||||||||    
T  11632080 ttatttattgaatttcatccaacttaacttttccactaactacaattaataaaggtgttttagtaaatactactaattttaccgttgaaatcaacacaat 11632179  T
Q  344 taatattttgttaagaatcgtgtacaaaccttaaa 378  Q
    ||||  ||| |||| ||||||| ||||| ||||||    
T  11632180 taatcattttttaataatcgtgcacaaatcttaaa 11632214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 242 - 379
Target Start/End: Complemental strand, 37773082 - 37772944
Alignment:
Q  242 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 341  Q
    ||||||||| |||||||||| ||| ||| ||| |||||| |||| |||||||| | | | |||||||||||||| | ||||| | |||| |||||| |||    
T  37773082 ccttatttaatgaatttcattcaacttaactattccactgactataattaataagggtattttagtaaatgatattaattttaccattgtaatcaataca 37772983  T
Q  342 attaat-attttgttaagaatcgtgtacaaaccttaaac 379  Q
    |||||| ||||  |||| |||| || |||||||||||||    
T  37772982 attaatcatttccttaataatcatgcacaaaccttaaac 37772944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 242 - 347
Target Start/End: Complemental strand, 23004500 - 23004395
Alignment:
Q  242 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 341  Q
    ||||||||| |||||||||| ||| ||| |||||||||||||||||||||||| | |   ||||||| ||  |||| ||||| | ||||||||| |||||    
T  23004500 ccttatttattgaatttcatacaacttaactactccactaactacaattaataagggtgttttagtatatactactaattttaccattgaaatcgacaca 23004401  T
Q  342 attaat 347  Q
    ||||||    
T  23004400 attaat 23004395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 242 - 342
Target Start/End: Complemental strand, 39043875 - 39043772
Alignment:
Q  242 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatac---tcattttgctattgaaatcaac 338  Q
    ||||||||| |||||||||| ||| ||| ||||||||||||||||||||||||   | | |||||||||||||||   | ||||| | ||||||||||||    
T  39043875 ccttatttattgaatttcattcaacttaactactccactaactacaattaataaaggtattttagtaaatgatactattaattttaccattgaaatcaac 39043776  T
Q  339 acaa 342  Q
    ||||    
T  39043775 acaa 39043772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 243 - 408
Target Start/End: Original strand, 3313252 - 3313414
Alignment:
Q  243 cttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaa 342  Q
    |||||||| |||||||||||||| |||  ||||||| ||||||||||||||| | |   |||||| |||  |||| ||||| | ||||||||| ||| ||    
T  3313252 cttatttattgaatttcatccaacttaaatactccattaactacaattaataagggtgttttagttaattctactaattttaccattgaaatcgacataa 3313351  T
Q  343 ttaatattttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtatt 408  Q
    |    ||||| |||| ||||||| ||||||||||||| |||| ||||  ||| |||| ||||||||    
T  3313352 t---cattttcttaataatcgtgcacaaaccttaaacgactaatattgtgaggtggatggagtatt 3313414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 252 - 390
Target Start/End: Original strand, 14194563 - 14194701
Alignment:
Q  252 tgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaattaat-att 350  Q
    |||||||||||||| |||  |||||||||||| |||||| |||   | | ||||||||||| |||| |||||   |||||||||||||||||| || |||    
T  14194563 tgaatttcatccaacttaattactccactaac-acaattcataaaagtattttagtaaatggtactaattttatcattgaaatcaacacaattgatcatt 14194661  T
Q  351 ttgttaagaatcgtgtacaaaccttaaacaactattattt 390  Q
    |  |||| ||||||| ||||||||||||| ||| ||||||    
T  14194662 tctttaaaaatcgtgcacaaaccttaaacgactgttattt 14194701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 256 - 378
Target Start/End: Original strand, 34750507 - 34750630
Alignment:
Q  256 tttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaattaat-attttgt 354  Q
    |||||||||| ||| ||||||||| |||||||||||||| |     |||||||||||||||| ||||| | ||| ||||||||||||| ||| ||||  |    
T  34750507 tttcatccaagttaactactccaccaactacaattaataaggatgttttagtaaatgatactaattttaccattaaaatcaacacaatcaatcatttcat 34750606  T
Q  355 taagaatcgtgtacaaaccttaaa 378  Q
     || ||||||| ||||||||||||    
T  34750607 caaaaatcgtgcacaaaccttaaa 34750630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 229 - 294
Target Start/End: Original strand, 12904847 - 12904913
Alignment:
Q  229 ttccactgttatacc-ttatttactgaatttcatccaatttagctactccactaactacaattaata 294  Q
    ||||||| ||||||| ||||||| |||||||||||||| |||  |||||||||||||||||||||||    
T  12904847 ttccactattatacccttatttattgaatttcatccaacttaattactccactaactacaattaata 12904913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 242 - 395
Target Start/End: Original strand, 53560214 - 53560368
Alignment:
Q  242 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 341  Q
    ||||||||| |||| ||||| ||| ||| |||||| |||||||| | |||||| | |   |||||||||||||||  ||||| | ||  ||||||||| |    
T  53560214 ccttatttattgaacttcattcaacttaactactctactaactatatttaataagggtgttttagtaaatgatacaaattttaccatcaaaatcaacata 53560313  T
Q  342 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagaga 395  Q
    |||||| ||||  ||||  |||||| |  ||||||||||||||||||||||||||    
T  53560314 attaatcatttccttaatcatcgtgcatcaaccttaaacaactattatttagaga 53560368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 244 - 379
Target Start/End: Original strand, 27471334 - 27471470
Alignment:
Q  244 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaat 343  Q
    ||||||| |||||||||| ||| ||| |||||||||||  || |||||||| | |   |||||||||||  ||| ||||  | ||||||||||||| |||    
T  27471334 ttatttattgaatttcattcaacttaactactccactacttataattaataagagtgttttagtaaatgcaactaatttcaccattgaaatcaacataat 27471433  T
Q  344 taat-attttgttaagaatcgtgtacaaaccttaaac 379  Q
    |||| ||||| |||| ||||||| ||||| |||||||    
T  27471434 taatcattttcttaataatcgtgcacaaatcttaaac 27471470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 302 - 389
Target Start/End: Complemental strand, 31158579 - 31158492
Alignment:
Q  302 tttagtaaatgatactcattttgctattgaaatcaacacaattaatattttgttaagaatcgtgtacaaaccttaaacaactattatt 389  Q
    ||||||||||| || | ||||| |||| ||||||| ||||||||||  ||| |||| ||||||| ||||||||||||| |||| ||||    
T  31158579 tttagtaaatgttattaattttactatcgaaatcagcacaattaatcattttttaataatcgtgcacaaaccttaaacgactaatatt 31158492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 319 - 389
Target Start/End: Complemental strand, 33491124 - 33491053
Alignment:
Q  319 attttgctattgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatt 389  Q
    ||||| ||||||||||||||||||||||| ||||  |||| ||||||| ||||||||||||| |||| ||||    
T  33491124 attttactattgaaatcaacacaattaatcatttccttaataatcgtgcacaaaccttaaacgactaatatt 33491053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 331 - 408
Target Start/End: Original strand, 17652834 - 17652912
Alignment:
Q  331 aaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtatt 408  Q
    ||||||||||||||||| ||||  |||| ||||||| | |||||| |||| ||||||||||||||| ||| ||||||||    
T  17652834 aaatcaacacaattaatcatttccttaataatcgtgcataaacctcaaacgactattatttagagacggatggagtatt 17652912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 244 - 395
Target Start/End: Original strand, 19609298 - 19609450
Alignment:
Q  244 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaat 343  Q
    ||||||| ||||||| ||| || ||| ||||||||||||| |||| ||||| |   | ||| |||||||||| | ||||| | ||||||||||||||||     
T  19609298 ttatttattgaattttatcaaacttatctactccactaacaacaagtaataagaatatttttgtaaatgatattaattttacgattgaaatcaacacaaa 19609397  T
Q  344 taat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagaga 395  Q
    |||| ||||| |||| | || |  ||||| ||||||| | |||||||| ||||    
T  19609398 taatcattttcttaaaattcatacacaaatcttaaacgattattattttgaga 19609450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 244 - 323
Target Start/End: Complemental strand, 30682182 - 30682103
Alignment:
Q  244 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcatttt 323  Q
    ||||||| |||||||| ||||| |||  || |||| ||||||||||||||| |   | ||||||||||||||||||||||    
T  30682182 ttatttattgaatttcgtccaacttaattattccattaactacaattaataagattattttagtaaatgatactcatttt 30682103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 244 - 389
Target Start/End: Complemental strand, 38137562 - 38137413
Alignment:
Q  244 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatg---atactcattttgctattgaaatcaacac 340  Q
    ||||||| ||||||||||| |||||| |||| |||||||||||| |||||| |   | ||||||| |||    |||| ||||| ||||||||||| ||||    
T  38137562 ttatttattgaatttcatcgaatttaactaccccactaactacagttaataagaatattttagtagatgtcagtactaattttactattgaaatcgacac 38137463  T
Q  341 aattaa-tattttgttaagaatcgtgtacaaaccttaaacaactattatt 389  Q
    ||| || |||||  || | |||| || ||||||||||||| |||| ||||    
T  38137462 aatgaattatttcatttataatcatgcacaaaccttaaacgactaatatt 38137413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 242 - 406
Target Start/End: Complemental strand, 49447909 - 49447747
Alignment:
Q  242 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 341  Q
    ||||||||| | ||||||||| |||||| ||| || ||||||||||||||||| | | | ||| |||||| ||| |  ||| |   ||||||||||||||    
T  49447909 ccttatttattaaatttcatcaaatttaactattctactaactacaattaataagggtattttggtaaataatattattttcg---ttgaaatcaacaca 49447813  T
Q  342 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 406  Q
    |||||| |||| |||||  |||||  |||||| |||||| |||| || || ||||| || ||||||    
T  49447812 attaatcatttcgttaattatcgtacacaaacattaaacgactaatagtttgagatagatggagta 49447747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 242 - 347
Target Start/End: Complemental strand, 3901267 - 3901162
Alignment:
Q  242 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 341  Q
    ||||||||| |||||||||||||| |||  ||| ||||||||||||| ||||| |     |||||||||||||| | |||||   |||||||| || |||    
T  3901267 ccttatttattgaatttcatccaacttaagtaccccactaactacaactaataagaatgttttagtaaatgatattaattttatcattgaaattaataca 3901168  T
Q  342 attaat 347  Q
    ||||||    
T  3901167 attaat 3901162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 306 - 410
Target Start/End: Complemental strand, 50035271 - 50035166
Alignment:
Q  306 gtaaatgatactcattttgctattgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggag 404  Q
    ||||||| |||| |||||  |||||||||||||| ||||| | ||||| |||| |||| || ||||||||||||   ||| ||||  |||| ||||||||    
T  50035271 gtaaatgctactaattttattattgaaatcaacataattattcattttcttaataatcatgcacaaaccttaaaagtctaatattgtgagacggagggag 50035172  T
Q  405 tattat 410  Q
    ||||||    
T  50035171 tattat 50035166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 242 - 294
Target Start/End: Original strand, 17652749 - 17652801
Alignment:
Q  242 ccttatttactgaatttcatccaatttagctactccactaactacaattaata 294  Q
    ||||||||| | |||||||||||| ||| ||||  ||||||||||||||||||    
T  17652749 ccttatttattaaatttcatccaacttaactacctcactaactacaattaata 17652801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 319 - 351
Target Start/End: Original strand, 37804898 - 37804930
Alignment:
Q  319 attttgctattgaaatcaacacaattaatattt 351  Q
    ||||| |||||||||||||||||||||||||||    
T  37804898 attttactattgaaatcaacacaattaatattt 37804930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 74; Significance: 1e-33; HSPs: 55)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 246 - 406
Target Start/End: Original strand, 34947508 - 34947669
Alignment:
Q  246 atttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaatta 345  Q
    ||||| |||||||||||||| ||| |||||||||||||||||||||||| | |   |||||||||||||| | ||||| | |||||||||||||||||||    
T  34947508 atttattgaatttcatccaacttaactactccactaactacaattaataagggtgttttagtaaatgataataattttaccattgaaatcaacacaatta 34947607  T
Q  346 at-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 406  Q
    || ||||  |||| || | || ||||||||||||| ||||||||||||||| ||||||||||    
T  34947608 atcatttctttaataaacatgcacaaaccttaaacgactattatttagagacggagggagta 34947669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 244 - 384
Target Start/End: Complemental strand, 24516412 - 24516271
Alignment:
Q  244 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaat 343  Q
    ||||||| |||||||||||||| ||| |||||||||||||||||||||||| |     ||||||||||| |||| ||||| | |||||||||||||||||    
T  24516412 ttatttattgaatttcatccaacttaactactccactaactacaattaataaggtttttttagtaaatgttactaattttaccattgaaatcaacacaat 24516313  T
Q  344 taat-attttgttaagaatcgtgtacaaaccttaaacaacta 384  Q
    |||| ||||| |||| ||||||||| ||||||||||| ||||    
T  24516312 taatcattttattaataatcgtgtataaaccttaaacgacta 24516271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 243 - 408
Target Start/End: Original strand, 83390 - 83556
Alignment:
Q  243 cttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaa 342  Q
    |||||||| ||||||||||| || ||| ||||||| |||||||||||||||| |     |||||||||||||||| ||||| | ||  ||||||||||||    
T  83390 cttatttattgaatttcatcaaacttaactactccgctaactacaattaataagaatgttttagtaaatgatactaattttaccatcaaaatcaacacaa 83489  T
Q  343 ttaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtatt 408  Q
    ||||| ||||  |||| ||| ||| | ||||||||||| ||||||||||||||| ||||||||||||    
T  83490 ttaatcatttccttaataattgtgcataaaccttaaacgactattatttagagacggagggagtatt 83556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 228 - 406
Target Start/End: Original strand, 26974015 - 26974198
Alignment:
Q  228 cttccactgttatacctt-atttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaa---atgatactcatttt 323  Q
    |||||||| |||||| || ||||| | |||||||| ||| ||| |||||||||||||||||||||||| | | | ||||||||   |||||| | |||||    
T  26974015 cttccactattatacatttatttaataaatttcattcaacttaactactccactaactacaattaataagagtattttagtaaatgatgatattaatttt 26974114  T
Q  324 gctattgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 406  Q
     | ||||||||||||||||||||| ||||  |||| ||||||| ||||||||||||| ||||| ||||||||| ||| ||||||    
T  26974115 accattgaaatcaacacaattaatcatttccttaataatcgtgcacaaaccttaaacgactataatttagagacggaaggagta 26974198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 229 - 408
Target Start/End: Original strand, 28103723 - 28103904
Alignment:
Q  229 ttccactgttatac-cttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgcta 327  Q
    ||||||| |||||| |||||||| |||||||||||||| ||| | ||| |||||||||||||||||| | |   ||| ||||||| | || ||||| | |    
T  28103723 ttccactattatacgcttatttattgaatttcatccaacttaaccacttcactaactacaattaataagggtgttttggtaaatgctgctaattttacca 28103822  T
Q  328 ttgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtatt 408  Q
    |||||||||||||||||||| ||||| |||| ||||||| ||||||||||||| || | ||||  |||| ||||||||||||    
T  28103823 ttgaaatcaacacaattaatcattttcttaataatcgtgcacaaaccttaaacgacaaatattgtgagacggagggagtatt 28103904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 243 - 407
Target Start/End: Complemental strand, 28202433 - 28202268
Alignment:
Q  243 cttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaa 342  Q
    |||||||| |||||||||||||| ||  |||||||||||||||||||||||| |     |||||||||||| | | ||||| | ||  ||||||||||||    
T  28202433 cttatttattgaatttcatccaactttactactccactaactacaattaataaggatgttttagtaaatgacattaattttaccatcaaaatcaacacaa 28202334  T
Q  343 ttaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtat 407  Q
    ||||| ||||| |||| || |||| | ||||||||||||||||||||||||||| ||| |||||||    
T  28202333 ttaattattttcttaataaccgtgcataaaccttaaacaactattatttagagacggatggagtat 28202268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 242 - 408
Target Start/End: Original strand, 9785992 - 9786159
Alignment:
Q  242 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 341  Q
    ||||||||| ||||||| |||||| ||| ||||| |||||||||||||||||| | |   |||||||||||| | | ||||| | ||  |||||||||||    
T  9785992 ccttatttattgaattttatccaacttaactacttcactaactacaattaataagcgtgttttagtaaatgaaattaattttaccatcaaaatcaacaca 9786091  T
Q  342 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtatt 408  Q
    |||||| ||||  |||| ||||||| ||| ||||||||| ||||||||||||||| ||| ||||||||    
T  9786092 attaatcatttccttaataatcgtgcacagaccttaaacgactattatttagagacggatggagtatt 9786159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 231 - 407
Target Start/End: Complemental strand, 11373565 - 11373387
Alignment:
Q  231 ccactgttatac-cttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctatt 329  Q
    ||||| |||||| |||||||| |||||||||||||| ||| |||||||||||||||||||||||| | |   ||||||||||| |||| ||||| | ||     
T  11373565 ccactattatactcttatttattgaatttcatccaacttaactactccactaactacaattaataagggtgttttagtaaatgctactaattttaccatc 11373466  T
Q  330 gaaatcaacacaatt-aatattttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtat 407  Q
    ||||||||||||||| || ||||  |||| ||||||| |||| |||||||| |||| ||||  || | |||||||||||    
T  11373465 gaaatcaacacaattaaacatttccttaataatcgtgcacaatccttaaacgactaatattgtgaaacggagggagtat 11373387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 242 - 406
Target Start/End: Complemental strand, 34100672 - 34100507
Alignment:
Q  242 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 341  Q
    ||||||||| ||||| |||||||| ||| ||||| || |||||||||||||||     | ||||||||||| |||| ||||| |||||||||||||||||    
T  34100672 ccttatttattgaatgtcatccaacttaactacttcagtaactacaattaataaagatattttagtaaatgctactaattttactattgaaatcaacaca 34100573  T
Q  342 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 406  Q
    |||||| ||||| |||| ||||||  ||||| |||||||||||| ||||  |||| ||| ||||||    
T  34100572 attaatcattttcttaataatcgttgacaaatcttaaacaactaatattgtgagacggatggagta 34100507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 302 - 406
Target Start/End: Original strand, 44180269 - 44180374
Alignment:
Q  302 tttagtaaatgatactcattttgctattgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggag 400  Q
    |||||||||| ||||| ||||| | ||||||||||||||||||||| ||||| |||| ||||||||| ||||||||||| ||||||||||||||| ||||    
T  44180269 tttagtaaattatactaattttaccattgaaatcaacacaattaatcattttcttaataatcgtgtataaaccttaaacgactattatttagagacggag 44180368  T
Q  401 ggagta 406  Q
     |||||    
T  44180369 agagta 44180374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 244 - 406
Target Start/End: Original strand, 7463219 - 7463382
Alignment:
Q  244 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaat 343  Q
    ||||||| |||||||||||||| ||| |||||||||||||||||||||||  | | | || |||||||| |||| |||||   |||||||||||||||||    
T  7463219 ttatttattgaatttcatccaacttaactactccactaactacaattaatgagggtatttaagtaaatgctactaattttatcattgaaatcaacacaat 7463318  T
Q  344 taat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 406  Q
    |||| ||||  |||| || |||| |||| |||||||| |||| ||||  |||| ||||||||||    
T  7463319 taatcatttccttaataaccgtgcacaatccttaaacgactaatattacgagacggagggagta 7463382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 229 - 389
Target Start/End: Complemental strand, 21350764 - 21350605
Alignment:
Q  229 ttccactgttatacc-ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgcta 327  Q
    ||||||| ||||||| ||||||| |||||||||||||| ||| |||||||||||||||||||||||| | |   ||||||||||   |||  |||| | |    
T  21350764 ttccactattatacccttatttattgaatttcatccaacttaactactccactaactacaattaataagggtgttttagtaaatacaactatttttacca 21350665  T
Q  328 ttgaaatcaacacaattaatattttgttaagaatcgtgtacaaaccttaaacaactattatt 389  Q
    ||||||||||||||||||  ||||  |||| ||||||| ||||||||||||| |||| ||||    
T  21350664 ttgaaatcaacacaatta--atttccttaataatcgtgcacaaaccttaaacgactaatatt 21350605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 229 - 395
Target Start/End: Original strand, 16904369 - 16904537
Alignment:
Q  229 ttccactgttatacc-ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgcta 327  Q
    ||||||| ||||||| ||||||| ||||||| |||||| |||  || | ||||||||| |||||||| | | | ||||| || ||||| | ||||| |||    
T  16904369 ttccactattatacccttatttattgaatttgatccaacttaattatttcactaactataattaatacgagtattttagaaagtgataataattttacta 16904468  T
Q  328 ttgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagaga 395  Q
    |||||||||||||||||||| ||||| |||| |||  || ||||||||||||| |||||||||| ||||    
T  16904469 ttgaaatcaacacaattaatcattttcttaaaaattttgcacaaaccttaaacgactattattttgaga 16904537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 242 - 384
Target Start/End: Complemental strand, 3178329 - 3178186
Alignment:
Q  242 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 341  Q
    ||||||||| |||||||||||||| ||| ||||||||||||||||||||||||   |   |||||||||||||| | ||||| | ||  |||||||||||    
T  3178329 ccttatttattgaatttcatccaacttaactactccactaactacaattaataaaggtgttttagtaaatgatattaattttaccatcaaaatcaacaca 3178230  T
Q  342 attaat-attttgttaagaatcgtgtacaaaccttaaacaacta 384  Q
    || ||| ||||  |||| |||| || ||||||||||||||||||    
T  3178229 atcaatcatttacttaataatcatgcacaaaccttaaacaacta 3178186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 243 - 377
Target Start/End: Complemental strand, 41506189 - 41506054
Alignment:
Q  243 cttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaa 342  Q
    |||||||| |||||||||||||| ||| |||||||||||||||||||||||| | |   ||||||||||| |||| ||||| | ||| |||| |||||||    
T  41506189 cttatttattgaatttcatccaacttaactactccactaactacaattaataagagtgttttagtaaatgctactaattttaccattaaaattaacacaa 41506090  T
Q  343 ttaat-attttgttaagaatcgtgtacaaaccttaa 377  Q
    ||||| ||||  |||| ||||||| | |||||||||    
T  41506089 ttaatcatttccttaataatcgtgcataaaccttaa 41506054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 242 - 395
Target Start/End: Complemental strand, 759216 - 759062
Alignment:
Q  242 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 341  Q
    ||||||||| |||||||||||||| ||| ||||||| |||||||||||||||| |     ||||||||||||||||  |||| | ||  |||||||||||    
T  759216 ccttatttattgaatttcatccaacttaactactccgctaactacaattaataaggatgttttagtaaatgatactagttttaccatcaaaatcaacaca 759117  T
Q  342 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagaga 395  Q
    |||||| ||||  |||| ||| ||| | ||||||||||  |||||||||||||||    
T  759116 attaatcatttccttaataattgtgcataaaccttaaatgactattatttagaga 759062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 229 - 389
Target Start/End: Original strand, 22738691 - 22738853
Alignment:
Q  229 ttccactgttatacctt-atttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgcta 327  Q
    ||||||| ||||||||| ||||| | |||||||||||| ||| ||| || ||||||||||||||||  |   | |||||||||||||||| ||||| | |    
T  22738691 ttccactattatacctttatttattaaatttcatccaacttaactaatctactaactacaattaatgaggatattttagtaaatgatactaattttacca 22738790  T
Q  328 ttgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatt 389  Q
    |||||||| ||||||||||| ||||  |||| ||||||| | ||||||||||| |||| ||||    
T  22738791 ttgaaatctacacaattaatcatttctttaataatcgtgcataaaccttaaacgactaatatt 22738853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 229 - 389
Target Start/End: Complemental strand, 46478432 - 46478270
Alignment:
Q  229 ttccactgttatac-cttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgcta 327  Q
    ||||||| |||||| |||||||| |||||||||||||| ||| |||||| | ||||||||||||||| | | | ||||||||||| |||| | ||| |||    
T  46478432 ttccactattatactcttatttattgaatttcatccaacttaactactcaattaactacaattaataagggtattttagtaaatgctactaactttacta 46478333  T
Q  328 ttgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatt 389  Q
    || |||| |||||||||||| ||||  |||| |||||||||  ||| |||||| |||| ||||    
T  46478332 ttaaaattaacacaattaatcatttaattaataatcgtgtatgaactttaaacgactaatatt 46478270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 254 - 406
Target Start/End: Original strand, 5524396 - 5524549
Alignment:
Q  254 aatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaattaat-atttt 352  Q
    |||||||||||| ||| |||||| |||||||| ||||||||   |   |||| |||||| |||| ||||| | ||||||||||||||||||||| |||||    
T  5524396 aatttcatccaacttaactactcaactaactataattaataaaagtgttttattaaatgttactaattttaccattgaaatcaacacaattaatcatttt 5524495  T
Q  353 gttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 406  Q
     |||| ||||||| |||||| |||||| || | ||||  |||||||||||||||    
T  5524496 cttaataatcgtgcacaaactttaaacgacaaatattgtgagatggagggagta 5524549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 244 - 379
Target Start/End: Original strand, 30865973 - 30866109
Alignment:
Q  244 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaat 343  Q
    ||||||| ||||||||||| || ||| |||||||||||| || |||||||| | | | |||||||||||||| | ||| | | |||||||| ||||||||    
T  30865973 ttatttattgaatttcatctaacttaactactccactaattataattaataagagtattttagtaaatgatattaattataccattgaaattaacacaat 30866072  T
Q  344 taat-attttgttaagaatcgtgtacaaaccttaaac 379  Q
    |||| ||||  |||| ||||||| |||||||||||||    
T  30866073 taatcatttctttaataatcgtgcacaaaccttaaac 30866109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 243 - 406
Target Start/End: Original strand, 23670491 - 23670654
Alignment:
Q  243 cttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaa 342  Q
    |||||||| | ||||||||| || ||| |||||||||||||||| ||||||| | |   ||||||||||| || | ||||| | || |||||||||||||    
T  23670491 cttatttattaaatttcatcaaacttaactactccactaactaccattaataagagtgttttagtaaatgctattaattttaccatggaaatcaacacaa 23670590  T
Q  343 ttaatattttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 406  Q
    ||||||||   |||| ||| ||| ||||||||||||| | || ||||  |||| ||||||||||    
T  23670591 ttaatattcccttaataattgtgcacaaaccttaaacgattaatattgtgagacggagggagta 23670654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 242 - 384
Target Start/End: Complemental strand, 32346177 - 32346034
Alignment:
Q  242 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 341  Q
    ||||||||| |||||||||| ||| ||| |||||||||||| || |||||||| | | | ||||||| |||||| | ||||| | |||||||||||||||    
T  32346177 ccttatttattgaatttcattcaacttaactactccactaattataattaataagagtattttagtagatgatattaattttaccattgaaatcaacaca 32346078  T
Q  342 attaa-tattttgttaagaatcgtgtacaaaccttaaacaacta 384  Q
    || || |||||  |||| || |||  ||||||||||||||||||    
T  32346077 atcaattatttccttaataaccgtacacaaaccttaaacaacta 32346034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 242 - 390
Target Start/End: Original strand, 2459475 - 2459622
Alignment:
Q  242 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 341  Q
    ||||||||| |||||||||||| | ||| |||||||||||||||||||||||| | |   | |||||||||  ||| ||||| |  ||||||||||||||    
T  2459475 ccttatttattgaatttcatcctacttaactactccactaactacaattaataagggtgttgtagtaaatg--actaattttaccgttgaaatcaacaca 2459572  T
Q  342 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattattt 390  Q
    |||||| ||||  |||| ||||||| |||||| |||||| |||| |||||    
T  2459573 attaatcatttccttaataatcgtgcacaaacattaaacgactaatattt 2459622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 243 - 396
Target Start/End: Original strand, 27920993 - 27921147
Alignment:
Q  243 cttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaa 342  Q
    |||||| | |||| ||||||||| ||| ||| | |||||||||||||||||| | |   |||| ||||||||||| ||||| | ||| ||||||||| ||    
T  27920993 cttattgattgaacttcatccaacttaactaatgcactaactacaattaataagagtgttttaataaatgatactaattttaccattaaaatcaacataa 27921092  T
Q  343 ttaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagat 396  Q
    ||||| ||||| |||| ||  ||| |  |||||||||||||||||||||||||||    
T  27921093 ttaatcattttcttaataactgtgcatcaaccttaaacaactattatttagagat 27921147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 252 - 384
Target Start/End: Complemental strand, 21760099 - 21759966
Alignment:
Q  252 tgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaattaat-att 350  Q
    |||||||||||||| ||| |||||||| |||||||||||| || | |   |||| ||||||||||| ||||| | ||  ||||||||||||||||| |||    
T  21760099 tgaatttcatccaacttaactactccattaactacaattagtaagggtgttttattaaatgatactaattttaccatcaaaatcaacacaattaatcatt 21760000  T
Q  351 ttgttaagaatcgtgtacaaaccttaaacaacta 384  Q
    || |||| |||| || ||||||||||||| ||||    
T  21759999 ttcttaataatcatgcacaaaccttaaacgacta 21759966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 244 - 379
Target Start/End: Original strand, 38391754 - 38391890
Alignment:
Q  244 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaat 343  Q
    ||||||| |||||||||||||| |||  || |||||||||||||||||| | | |   |||||||||||||||| ||||| | ||  |||||||||||||    
T  38391754 ttatttattgaatttcatccaacttaattattccactaactacaattaacaagagtgttttagtaaatgatactaattttaccatcaaaatcaacacaat 38391853  T
Q  344 taat-attttgttaagaatcgtgtacaaaccttaaac 379  Q
    |||| ||||| |||| ||| ||| | |||||||||||    
T  38391854 taatcattttcttaataattgtgcataaaccttaaac 38391890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 242 - 407
Target Start/End: Original strand, 40076322 - 40076485
Alignment:
Q  242 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 341  Q
    ||||||||| |||||||||||||| ||| ||| ||   ||| |||||||||||   |   |||||||||||||||| ||||| | ||  |||| ||||||    
T  40076322 ccttatttattgaatttcatccaacttaactaatc---taagtacaattaataatagtgttttagtaaatgatactaattttaccatcaaaattaacaca 40076418  T
Q  342 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtat 407  Q
    |||||| ||||  |||| ||||||| | ||||||||||| |||||||||||||||| || |||||||    
T  40076419 attaatcatttctttaataatcgtgcataaaccttaaacgactattatttagagattgaaggagtat 40076485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 244 - 406
Target Start/End: Original strand, 13961965 - 13962128
Alignment:
Q  244 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaat 343  Q
    ||||||| | |||||||||||| ||| ||||||||||||||||| |||||| |   | |||| ||| ||||| | |||||   ||| |||||||||||||    
T  13961965 ttatttattaaatttcatccaacttaactactccactaactacacttaataaggatattttattaagtgatattaattttatcattaaaatcaacacaat 13962064  T
Q  344 taat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 406  Q
    |||| ||||  |||| || |||| | ||||||||||  ||||||||||||||  ||||||||||    
T  13962065 taatcatttccttaataaacgtgcataaaccttaaatgactattatttagaggcggagggagta 13962128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 258 - 408
Target Start/End: Complemental strand, 16560679 - 16560528
Alignment:
Q  258 tcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaattaat-attttgtta 356  Q
    |||||||| ||| |||| ||||||||||||||||||| |     ||||||||||||||||  |||| | ||  |||| |||||||||||| ||||  |||    
T  16560679 tcatccaacttaactaccccactaactacaattaataaggatgttttagtaaatgatactagttttaccatcaaaataaacacaattaatcatttcctta 16560580  T
Q  357 agaatcgtgtacaaaccttaaacaactattatttagagatggagggagtatt 408  Q
    | ||||||| | ||| ||||||  ||||||||||||||| ||||||||||||    
T  16560579 ataatcgtgcataaatcttaaatgactattatttagagacggagggagtatt 16560528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 258 - 408
Target Start/End: Original strand, 16604983 - 16605134
Alignment:
Q  258 tcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaattaat-attttgtta 356  Q
    |||||||| ||| |||| ||||||||||||||||||| |     ||||||||||||||||  |||| | ||  |||| |||||||||||| ||||  |||    
T  16604983 tcatccaacttaactaccccactaactacaattaataaggatgttttagtaaatgatactagttttaccatcaaaataaacacaattaatcatttcctta 16605082  T
Q  357 agaatcgtgtacaaaccttaaacaactattatttagagatggagggagtatt 408  Q
    | ||||||| | ||| ||||||  ||||||||||||||| ||||||||||||    
T  16605083 ataatcgtgcataaatcttaaatgactattatttagagacggagggagtatt 16605134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 284 - 406
Target Start/End: Original strand, 39452390 - 39452512
Alignment:
Q  284 tacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaattaatattttgttaagaatcgtgtacaaaccttaaacaact 383  Q
    ||||||||||| | | | |||||||||||||| | ||||| | ||| ||||||||| | | | |||||| ||||  || |||| |||||||||||| |||    
T  39452390 tacaattaataagggtattttagtaaatgatattaattttaccattaaaatcaacatattaattatttttttaaagattgtgtccaaaccttaaacgact 39452489  T
Q  384 attatttagagatggagggagta 406  Q
    |||||||||||||||||| ||||    
T  39452490 attatttagagatggaggaagta 39452512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 274 - 395
Target Start/End: Original strand, 42935697 - 42935819
Alignment:
Q  274 ctccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaattaat-attttgttaagaatcgtgtacaaac 372  Q
    ||||||||||||||||||||| | |   |||||||||||||| | ||||| | ||  ||||||||||||||||| ||||| |||| || |||| |  |||    
T  42935697 ctccactaactacaattaataagggtgttttagtaaatgatattaattttaccatcaaaatcaacacaattaatcattttcttaataaccgtgcatcaac 42935796  T
Q  373 cttaaacaactattatttagaga 395  Q
    ||||||| |||||||||||||||    
T  42935797 cttaaacgactattatttagaga 42935819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 242 - 406
Target Start/End: Original strand, 21390299 - 21390466
Alignment:
Q  242 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 341  Q
    ||||||||| ||||||||||| || ||| ||||||||||||||||||| |||| |     |||||||||||||| |  |||| | ||  |||| ||||||    
T  21390299 ccttatttattgaatttcatctaacttaactactccactaactacaatcaataaggatgttttagtaaatgatattagttttaccatcaaaattaacaca 21390398  T
Q  342 attaat-attttgttaagaatcgtgtacaaaccttaaacaac--tattatttagagatggagggagta 406  Q
    |||||| ||||  |||| ||||||| | ||||||||||| ||  ||||||||||||| ||| ||||||    
T  21390399 attaatcatttccttaataatcgtgcataaaccttaaacgactgtattatttagagacggatggagta 21390466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 242 - 318
Target Start/End: Original strand, 25571423 - 25571499
Alignment:
Q  242 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactc 318  Q
    ||||||||| |||||||||||||| ||| ||| |||||||||||||| ||||| | | | |||||||||||||||||    
T  25571423 ccttatttattgaatttcatccaacttaactattccactaactacaactaataagggtattttagtaaatgatactc 25571499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 244 - 378
Target Start/End: Original strand, 49101669 - 49101807
Alignment:
Q  244 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactt---tagtaaatgatactcattttgctattgaaatcaacac 340  Q
    ||||||| |||||||||| ||| ||| |||||||||||||||||||||||||| | | ||   |||||||||||| | |||||    || |||| |||||    
T  49101669 ttatttattgaatttcattcaacttaactactccactaactacaattaatatgagtattttaatagtaaatgatattaattttatccttaaaataaacac 49101768  T
Q  341 aattaat-attttgttaagaatcgtgtacaaaccttaaa 378  Q
    ||||||| ||||| |||| ||||||  ||||||||||||    
T  49101769 aattaatcattttcttaaaaatcgtaaacaaaccttaaa 49101807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 242 - 384
Target Start/End: Complemental strand, 19271858 - 19271715
Alignment:
Q  242 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 341  Q
    ||||||||| | | |||||||||| ||| ||||||||||||||||||||||||   | | |||||| ||||  ||| ||||    |||||||||||||||    
T  19271858 ccttatttattaattttcatccaacttaactactccactaactacaattaataaaagtattttagtcaatgccactaatttgatcattgaaatcaacaca 19271759  T
Q  342 attaat-attttgttaagaatcgtgtacaaaccttaaacaacta 384  Q
    |||||| ||||| |||| ||||||| |||| | |||||| ||||    
T  19271758 attaatcatttttttaataatcgtgcacaagcattaaacgacta 19271715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 242 - 345
Target Start/End: Complemental strand, 32018837 - 32018734
Alignment:
Q  242 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 341  Q
    ||||||||| | ||||| |||||| |||  ||||| |||||| |||||||||| | | | ||||||||||||||   ||||| |||||||||||||||||    
T  32018837 ccttatttattaaatttaatccaacttaattactctactaacgacaattaataagagtattttagtaaatgatagaaattttactattgaaatcaacaca 32018738  T
Q  342 atta 345  Q
    ||||    
T  32018737 atta 32018734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 242 - 347
Target Start/End: Complemental strand, 32019041 - 32018935
Alignment:
Q  242 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctatt-gaaatcaacac 340  Q
    ||||||||| | |||||||||||| |||  |||||||||||| |||||||||| | | | ||||||||||||||   ||||| |||||  ||||||||||    
T  32019041 ccttatttattaaatttcatccaacttaattactccactaacaacaattaataagagtattttagtaaatgatagaaattttactattcaaaatcaacac 32018942  T
Q  341 aattaat 347  Q
    |||||||    
T  32018941 aattaat 32018935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 242 - 347
Target Start/End: Original strand, 33819218 - 33819323
Alignment:
Q  242 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 341  Q
    ||||||||| |||||||||| ||| ||  ||||||||| ||| |||||||||| | |   ||| ||||||| |||| ||||| | |||||||||||||||    
T  33819218 ccttatttaatgaatttcattcaacttcactactccacaaacaacaattaataagagtgattttgtaaatgctactaattttaccattgaaatcaacaca 33819317  T
Q  342 attaat 347  Q
    ||||||    
T  33819318 attaat 33819323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 244 - 347
Target Start/End: Original strand, 43873929 - 43874032
Alignment:
Q  244 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaat 343  Q
    ||||||| | || ||||||||| ||| ||||||||||||||||| |||||| | |   |||||||||||||| | ||||| | ||  |||||||||||||    
T  43873929 ttatttattaaacttcatccaacttaactactccactaactacatttaataagggtgttttagtaaatgatattaattttaccatcaaaatcaacacaat 43874028  T
Q  344 taat 347  Q
    ||||    
T  43874029 taat 43874032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 229 - 389
Target Start/End: Complemental strand, 7457560 - 7457398
Alignment:
Q  229 ttccactgttatac-cttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgcta 327  Q
    ||||||| |||||| |||||||| ||||||| ||  || |||  || ||| ||||||||| |||||| | |   |||||||||||  ||| ||||| | |    
T  7457560 ttccactattatactcttatttattgaatttaatttaacttaattattccgctaactacatttaataagggtcttttagtaaatgtaactaattttacca 7457461  T
Q  328 ttgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatt 389  Q
    |||||||||||| ||||||| ||||| |||| ||||||| |||||| ||||| ||||| ||||    
T  7457460 ttgaaatcaacataattaatcatttttttaataatcgtgcacaaacattaaataactaatatt 7457398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 242 - 352
Target Start/End: Original strand, 37245694 - 37245803
Alignment:
Q  242 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 341  Q
    ||||||||| |||||||||||||| ||| | |||||||| | ||||||||||| | |   ||||||||||| |||| | ||| | ||||||||||||| |    
T  37245694 ccttatttattgaatttcatccaacttaaccactccacttattacaattaataagagtgttttagtaaatgctact-aatttaccattgaaatcaacaga 37245792  T
Q  342 attaatatttt 352  Q
    |||||| ||||    
T  37245793 attaatctttt 37245803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 331 - 408
Target Start/End: Original strand, 46211524 - 46211602
Alignment:
Q  331 aaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtatt 408  Q
    ||||||||||||||||| ||||  |||| ||| ||| | ||||||||||| ||||||||||| ||| ||||||||||||    
T  46211524 aaatcaacacaattaatcatttccttaataattgtgcataaaccttaaacgactattatttaaagacggagggagtatt 46211602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 277 - 409
Target Start/End: Complemental strand, 2850971 - 2850838
Alignment:
Q  277 cactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaattaat-attttgttaagaatcgtgtacaaacctt 375  Q
    ||||||||| |||||||  | | | |||||||||| ||| | |||||   ||||||||||||| ||||||| ||||  |||| |||| || ||||||| |    
T  2850971 cactaactataattaatgagggtattttagtaaataatattaattttatcattgaaatcaacataattaatcatttccttaataatcatgcacaaaccat 2850872  T
Q  376 aaacaactattatttagagatggagggagtatta 409  Q
    |||| ||||| ||||||||| ||| |||||||||    
T  2850871 aaacgactataatttagagacggatggagtatta 2850838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 242 - 294
Target Start/End: Complemental strand, 6495059 - 6495007
Alignment:
Q  242 ccttatttactgaatttcatccaatttagctactccactaactacaattaata 294  Q
    ||||||||| | |||||||||||| ||  ||||||||||||||||||||||||    
T  6495059 ccttatttattaaatttcatccaactttactactccactaactacaattaata 6495007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 244 - 339
Target Start/End: Complemental strand, 17828473 - 17828379
Alignment:
Q  244 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaaca 339  Q
    ||||||| |||||| ||||||| |||  ||||||||||||||||||| ||| | | | ||| |||||||||| | ||||| | |||||||||||||    
T  17828473 ttatttattgaatt-catccaacttaattactccactaactacaattgataagagtaattttgtaaatgatattaattttaccattgaaatcaaca 17828379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 252 - 294
Target Start/End: Original strand, 35333057 - 35333099
Alignment:
Q  252 tgaatttcatccaatttagctactccactaactacaattaata 294  Q
    ||||||||||| || ||| ||||||||||||||||||||||||    
T  35333057 tgaatttcatctaacttaactactccactaactacaattaata 35333099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 314 - 378
Target Start/End: Original strand, 12631381 - 12631446
Alignment:
Q  314 tactcattttgctattgaaatcaacacaattaa-tattttgttaagaatcgtgtacaaaccttaaa 378  Q
    |||| ||||| ||||||||||||| |||||||| |||||  |||| ||||||| ||||||||||||    
T  12631381 tactaattttactattgaaatcaatacaattaattatttccttaataatcgtgcacaaaccttaaa 12631446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 369 - 406
Target Start/End: Original strand, 36790878 - 36790915
Alignment:
Q  369 aaaccttaaacaactattatttagagatggagggagta 406  Q
    ||||||||||| ||||||||||||||| ||||||||||    
T  36790878 aaaccttaaacgactattatttagagacggagggagta 36790915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 242 - 294
Target Start/End: Original strand, 42796009 - 42796064
Alignment:
Q  242 ccttatttactgaatttcatccaatttagc---tactccactaactacaattaata 294  Q
    ||||||||| |||||||||||||| ||| |   |||||||||||||||||||||||    
T  42796009 ccttatttaatgaatttcatccaacttaacaactactccactaactacaattaata 42796064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 271 - 323
Target Start/End: Complemental strand, 21937883 - 21937831
Alignment:
Q  271 ctactccactaactacaattaatatgtggactttagtaaatgatactcatttt 323  Q
    |||||||||||||||||||||||| | |  ||||||||||||| ||| |||||    
T  21937883 ctactccactaactacaattaataagagtgctttagtaaatgacactaatttt 21937831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 242 - 294
Target Start/End: Original strand, 36790744 - 36790796
Alignment:
Q  242 ccttatttactgaatttcatccaatttagctactccactaactacaattaata 294  Q
    ||||||||| |||||||||||| |  || |||||| |||||||||||||||||    
T  36790744 ccttatttattgaatttcatccgacataactactcaactaactacaattaata 36790796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 302 - 395
Target Start/End: Complemental strand, 37850791 - 37850700
Alignment:
Q  302 tttagtaaatgatactcattttgctattgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagaga 395  Q
    |||||||||| ||||| |||||   ||| ||||||| || |||||| ||||| | || |||||||||||||| |||||||| |||||||| ||||    
T  37850791 tttagtaaatcatactaatttt---attaaaatcaataccattaattattttttaaaaaatcgtgtacaaactttaaacaattattattttgaga 37850700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 242 - 294
Target Start/End: Original strand, 44424148 - 44424200
Alignment:
Q  242 ccttatttactgaatttcatccaatttagctactccactaactacaattaata 294  Q
    ||||||||| |||| ||||||||| |||  |||||||||||||||| ||||||    
T  44424148 ccttatttattgaacttcatccaacttaattactccactaactacatttaata 44424200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 229 - 292
Target Start/End: Complemental strand, 47045610 - 47045546
Alignment:
Q  229 ttccactgttatac-cttatttactgaatttcatccaatttagctactccactaactacaattaa 292  Q
    ||||||| |||||| |||||||  |||||||||||||| ||| ||||| ||||||| ||||||||    
T  47045610 ttccactattatactcttatttgttgaatttcatccaacttaactactacactaaccacaattaa 47045546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 73; Significance: 4e-33; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 243 - 406
Target Start/End: Complemental strand, 10180065 - 10179901
Alignment:
Q  243 cttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaa 342  Q
    |||||| | |||||||||| ||| ||| |||||||||||||||||||||||| ||| | |||||||||| ||||| ||||| | ||||||||||| ||||    
T  10180065 cttattaattgaatttcattcaacttaactactccactaactacaattaataagtgtattttagtaaattatactaattttaccattgaaatcaatacaa 10179966  T
Q  343 ttaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 406  Q
     || | ||||| |||| ||||||| ||||||||||||| |||||| |||||||| ||||||||||    
T  10179965 ctactcattttcttaataatcgtgcacaaaccttaaacgactattttttagagacggagggagta 10179901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 235 - 406
Target Start/End: Complemental strand, 34948813 - 34948641
Alignment:
Q  235 tgttataccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaat 334  Q
    |||||||||||||||| |||||||||||||| ||| ||||||||||||||||||||||||  ||   ||  |||||||||||| ||||| ||||| ||||    
T  34948813 tgttataccttatttattgaatttcatccaacttaactactccactaactacaattaataaatgtgtttctgtaaatgatactaattttactatttaaat 34948714  T
Q  335 caacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 406  Q
    ||||||||||||| ||||  |||| ||| ||||||||| ||||||| | ||||||| | ||| ||| ||||||    
T  34948713 caacacaattaatcatttccttaataattgtgtacaaatcttaaacgattattattcaaagacggatggagta 34948641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 242 - 409
Target Start/End: Original strand, 31271018 - 31271186
Alignment:
Q  242 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 341  Q
    ||||||||| ||||||| |||||| ||| ||||||||||||||| |||||||| | | | ||||||| |||||| | ||||| | ||| |||||||||||    
T  31271018 ccttatttattgaattttatccaacttaactactccactaactataattaataagagtattttagtatatgatattaattttaccattaaaatcaacaca 31271117  T
Q  342 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtatta 409  Q
    || ||| ||||| |||| ||||||  ||||||||||||| ||||| |||||||| |  |||||||||||    
T  31271118 atcaatcattttcttaataatcgtacacaaaccttaaacgactataatttagaggtttagggagtatta 31271186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 243 - 347
Target Start/End: Original strand, 42886998 - 42887102
Alignment:
Q  243 cttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaa 342  Q
    |||||||| ||||||| |||||| ||| |||| |||||||||||||||||||   | | |||||||||||||||| ||||||||||||||||||||||||    
T  42886998 cttatttattgaattttatccaacttaactacgccactaactacaattaataaaggtattttagtaaatgatactaattttgctattgaaatcaacacaa 42887097  T
Q  343 ttaat 347  Q
    |||||    
T  42887098 ttaat 42887102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 275 - 395
Target Start/End: Original strand, 51143 - 51263
Alignment:
Q  275 tccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaattaat-attttgttaagaatcgtgtacaaacc 373  Q
    ||||||||||||||||||||  ||   ||| |||||||||||| ||||| | ||| ||||||||||||||||| ||||| |||| ||||||| |||||||    
T  51143 tccactaactacaattaataaatgtgtttttgtaaatgatacttattttac-attaaaatcaacacaattaatcattttcttaataatcgtgcacaaacc 51241  T
Q  374 ttaaacaactattatttagaga 395  Q
    ||||||||||||||||||||||    
T  51242 ttaaacaactattatttagaga 51263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 244 - 406
Target Start/End: Complemental strand, 11977053 - 11976890
Alignment:
Q  244 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaat 343  Q
    ||||||| ||||||||||| || ||| |||||| ||||||||||||||||| | | | ||||||||||| |||| ||| | | |||||||||||||||||    
T  11977053 ttatttattgaatttcatctaacttaactactctactaactacaattaataagggtattttagtaaatgctactgattataccattgaaatcaacacaat 11976954  T
Q  344 taat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 406  Q
    |||| ||||   ||| |||| || ||||||||||||| |||| ||||  |||| ||||||||||    
T  11976953 taatgatttccataataatcatgcacaaaccttaaacgactaatattatgagacggagggagta 11976890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 229 - 347
Target Start/End: Complemental strand, 44761627 - 44761508
Alignment:
Q  229 ttccactgttatacctt-atttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgcta 327  Q
    ||||||| ||||||| | ||||| |||||||||||||| ||| |||||||||||||||||||||||| | |   ||||||||||| |||| ||||| | |    
T  44761627 ttccactattataccctcatttattgaatttcatccaacttaactactccactaactacaattaataagggtgttttagtaaatgctactaattttacca 44761528  T
Q  328 ttgaaatcaacacaattaat 347  Q
    ||||||||||||||||||||    
T  44761527 ttgaaatcaacacaattaat 44761508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 244 - 395
Target Start/End: Complemental strand, 17719375 - 17719223
Alignment:
Q  244 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaat 343  Q
    ||||||| | |||||||||||| ||| ||||||||||||||| |||||||| |   | |||||||||| ||||| | ||| | ||| ||||||  |||||    
T  17719375 ttatttattaaatttcatccaacttaactactccactaactataattaataaggatattttagtaaataatactaactttaccattaaaatcattacaat 17719276  T
Q  344 taat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagaga 395  Q
    |||| ||||| |||| ||||||| ||||| ||||||| |||||||||||||||    
T  17719275 taatcatttttttaataatcgtgcacaaatcttaaacgactattatttagaga 17719223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 244 - 414
Target Start/End: Complemental strand, 27294176 - 27294005
Alignment:
Q  244 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaat 343  Q
    ||||||| |||||||||||||| |||  ||||||||||||| |||||||||  |  | ||||||||| |||||| |||||   ||| |||| ||||||||    
T  27294176 ttatttattgaatttcatccaacttaattactccactaactgcaattaataaatatattttagtaaaagatactaattttatcattcaaatgaacacaat 27294077  T
Q  344 taat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtattatctaa 414  Q
    |||| | ||  |||| ||||||| ||||||||||| |||||||||||| ||||  || ||||||||| ||||    
T  27294076 taataacttctttaaaaatcgtgcacaaaccttaaccaactattattttgagaccgaaggagtattaactaa 27294005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 242 - 407
Target Start/End: Original strand, 39482612 - 39482778
Alignment:
Q  242 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 341  Q
    ||||||||| |||||||||| | | ||| ||| ||||||||||| |||||||| | |   ||||||||||  |||| ||||| |  ||||||||||||||    
T  39482612 ccttatttattgaatttcattccacttaactagtccactaactataattaataagggtgttttagtaaattctactaattttacccttgaaatcaacaca 39482711  T
Q  342 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtat 407  Q
    |||||| ||||| |||| ||||||| ||||| ||||||| |||| ||||  |||| |||||||||||    
T  39482712 attaatcattttcttaataatcgtgcacaaatcttaaacgactaatattgtgagacggagggagtat 39482778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 242 - 406
Target Start/End: Complemental strand, 9300232 - 9300067
Alignment:
Q  242 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 341  Q
    ||||||||| |||||||||| ||| ||| ||||||||||||||| |||||||| | |   ||||||||||| || | ||||| | ||| |||||||||||    
T  9300232 ccttatttattgaatttcattcaacttaactactccactaactaaaattaataagggtgttttagtaaatgctattaattttaccattaaaatcaacaca 9300133  T
Q  342 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 406  Q
    |  ||| ||||| |||| ||||||| | |||||||||||||  | ||||  |||||||||||||||    
T  9300132 aacaatcattttcttaataatcgtgcataaaccttaaacaatcaatattgtgagatggagggagta 9300067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 247 - 379
Target Start/End: Complemental strand, 21216215 - 21216082
Alignment:
Q  247 tttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaattaa 346  Q
    |||| |||||||||||||| ||| |||||||||||||||||||||||| |     |||||||||||  ||| ||||| | ||||||||||||||||||||    
T  21216215 tttattgaatttcatccaacttaactactccactaactacaattaataaggatgttttagtaaatgcaactaattttaccattgaaatcaacacaattaa 21216116  T
Q  347 t-attttgttaagaatcgtgtacaaaccttaaac 379  Q
    | ||||  |||| |||| || |||||||||||||    
T  21216115 tcatttccttaataatcatgcacaaaccttaaac 21216082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 229 - 395
Target Start/End: Original strand, 7172897 - 7173065
Alignment:
Q  229 ttccactgttatacc-ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgcta 327  Q
    ||||||| ||||||| ||||||| |||||||||| ||| ||| ||||| || |||||||||||||||  |    ||||||||||| |||| |||||   |    
T  7172897 ttccactattatacccttatttattgaatttcattcaacttaactacttcattaactacaattaataaatatgttttagtaaatgctactaattttatca 7172996  T
Q  328 ttgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagaga 395  Q
    |||||||||||||||||||| ||||  |||| |||  |  ||||||||||||||||||| |||||||||    
T  7172997 ttgaaatcaacacaattaatcatttctttaataatgatacacaaaccttaaacaactataatttagaga 7173065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 242 - 409
Target Start/End: Complemental strand, 40996484 - 40996316
Alignment:
Q  242 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 341  Q
    ||||||||| |||||||||||||| ||| | | | |||||||||||||||||| | |   |||||||||||| ||| ||||| |  |  |||||||||||    
T  40996484 ccttatttattgaatttcatccaacttaaccatttcactaactacaattaataagggtgttttagtaaatgaaactaattttacattcaaaatcaacaca 40996385  T
Q  342 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtatta 409  Q
    |||||| ||||  |||| ||| ||| | ||||||||||| | ||||||||||||| ||| |||||||||    
T  40996384 attaatcatttccttaacaattgtgcataaaccttaaacgattattatttagagacggatggagtatta 40996316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 244 - 406
Target Start/End: Complemental strand, 10098108 - 10097945
Alignment:
Q  244 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaat 343  Q
    ||||||| |||| ||||||||| ||| |||||||||||||||||||||||| | |   | |||||||||||| | ||||| | ||  ||||||| |||||    
T  10098108 ttatttattgaacttcatccaacttaactactccactaactacaattaataagggtgttatagtaaatgatattaattttaccatcaaaatcaatacaat 10098009  T
Q  344 taat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 406  Q
    |||| ||||| |||| || | || |  |||||||||| ||||||||||||| | ||||||||||    
T  10098008 taatcattttcttaataaccatgcatcaaccttaaacgactattatttagatacggagggagta 10097945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 242 - 395
Target Start/End: Original strand, 32476284 - 32476438
Alignment:
Q  242 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 341  Q
    ||||||||| ||||||||||| || ||| ||||| || ||||||||||||||| | | | |||| ||||||||| | |||||   ||||||||||||| |    
T  32476284 ccttatttattgaatttcatcaaacttaactacttcattaactacaattaataagggtattttaataaatgatattaattttatcattgaaatcaacaga 32476383  T
Q  342 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagaga 395  Q
    || ||| ||||| |||| || |||| ||||||||||||| ||| | |||||||||    
T  32476384 atcaatcattttcttaataaccgtgcacaaaccttaaacgactttaatttagaga 32476438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 277 - 384
Target Start/End: Complemental strand, 1875676 - 1875568
Alignment:
Q  277 cactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaattaat-attttgttaagaatcgtgtacaaacctt 375  Q
    |||||||||||||||||| | |   ||||||||||| |||| ||||| | ||||||||||||||||||||| ||||  |||| ||||||| |||||||||    
T  1875676 cactaactacaattaataagggtgttttagtaaatgctactaattttaccattgaaatcaacacaattaatcatttccttaataatcgtgcacaaacctt 1875577  T
Q  376 aaacaacta 384  Q
    |||| ||||    
T  1875576 aaacgacta 1875568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 246 - 408
Target Start/End: Original strand, 13335217 - 13335380
Alignment:
Q  246 atttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaatta 345  Q
    ||||| ||||||||||| || ||| |||||| ||||||| |||||||||  ||   |||| ||||||||||| ||||| | ||  |||||||||||||||    
T  13335217 atttattgaatttcatcaaacttaactactctactaactgcaattaataaatgtgttttactaaatgatactaattttaccatcaaaatcaacacaatta 13335316  T
Q  346 a-tattttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtatt 408  Q
    |  ||||  |||| ||||||| | ||||||||||| | ||||||||||||| | | ||||||||    
T  13335317 accatttccttaataatcgtgcataaaccttaaacgattattatttagagaagaatggagtatt 13335380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 274 - 378
Target Start/End: Complemental strand, 42972595 - 42972490
Alignment:
Q  274 ctccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaattaat-attttgttaagaatcgtgtacaaac 372  Q
    |||||||||||| |||||||| | | | ||||||||| |||| | ||||| | ||||||||||| ||||||||| ||||| |||| ||||||| ||||||    
T  42972595 ctccactaactataattaataagggtattttagtaaacgatattaattttaccattgaaatcaaaacaattaatcattttcttaataatcgtgcacaaac 42972496  T
Q  373 cttaaa 378  Q
    ||||||    
T  42972495 cttaaa 42972490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 243 - 347
Target Start/End: Complemental strand, 5053271 - 5053167
Alignment:
Q  243 cttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaa 342  Q
    |||||||| ||||| |||||||||||| ||||||| |||||||||||||||| |     |||||||||||||| | ||||| | ||  ||||||||||||    
T  5053271 cttatttattgaatctcatccaatttaactactccgctaactacaattaataagactgttttagtaaatgatattaattttaccatcaaaatcaacacaa 5053172  T
Q  343 ttaat 347  Q
    |||||    
T  5053171 ttaat 5053167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 242 - 408
Target Start/End: Original strand, 39405759 - 39405926
Alignment:
Q  242 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 341  Q
    ||||||||| | |||||||| ||| |||  |||||||||||||  ||||||||     | | |||||||||||||| |||||   |||||||| ||||||    
T  39405759 ccttatttatttaatttcattcaacttaattactccactaactgtaattaataaagatattatagtaaatgatactaattttatcattgaaattaacaca 39405858  T
Q  342 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtatt 408  Q
    |||||| ||||  |||| ||||||| ||||||||||||| |||| ||||  |||| ||| ||||||||    
T  39405859 attaatcatttccttaataatcgtgcacaaaccttaaacgactaatattgtgagacggatggagtatt 39405926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 229 - 406
Target Start/End: Complemental strand, 45425799 - 45425620
Alignment:
Q  229 ttccactgttatacc-ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgcta 327  Q
    ||||||| ||||||| ||||||| |||||||||| ||| |||  ||||||||||||||||||||||| |     |||| |||||| || | ||||| | |    
T  45425799 ttccactattatacccttatttattgaatttcatacaacttaattactccactaactacaattaataagaatgttttaataaatgttattaattttacca 45425700  T
Q  328 ttgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 406  Q
    || ||||||||||||||||| ||||| |||| |||| || | ||| ||||||| |||| ||||  |||| ||| ||||||    
T  45425699 ttaaaatcaacacaattaatcattttcttaataatcatgcataaaacttaaacgactaatattatgagacggaaggagta 45425620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 244 - 397
Target Start/End: Complemental strand, 4428468 - 4428315
Alignment:
Q  244 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaat 343  Q
    ||||||| ||||||||||| || ||| ||| | ||||||||||||||||||  || | |||||||||||||| | |||||   ||| ||||||||||||     
T  4428468 ttatttattgaatttcatctaacttaactaattcactaactacaattaataattgtattttagtaaatgataataattttatcattaaaatcaacacaaa 4428369  T
Q  344 taat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatg 397  Q
    |||| ||||| |||| |||  |  | ||||||||||| |||||||||| ||||||    
T  4428368 taatcattttcttaaaaat-atacataaaccttaaacgactattattttgagatg 4428315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 242 - 294
Target Start/End: Complemental strand, 29226647 - 29226595
Alignment:
Q  242 ccttatttactgaatttcatccaatttagctactccactaactacaattaata 294  Q
    ||||||||| ||||||||||| || ||| ||||||||||||||||||||||||    
T  29226647 ccttatttattgaatttcatctaacttaactactccactaactacaattaata 29226595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 244 - 406
Target Start/End: Original strand, 31082618 - 31082781
Alignment:
Q  244 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaat 343  Q
    ||||||| | |||||||||||| ||| ||||||||||||||| |||||||| | |   ||||||||||   ||| |||||   ||| ||||||| |||||    
T  31082618 ttatttattaaatttcatccaacttaactactccactaactataattaataagggtgttttagtaaataccactaattttatcattaaaatcaagacaat 31082717  T
Q  344 taat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 406  Q
    |||| ||||  ||||  |||||| ||||||| |||||||||| ||||  |||| || |||||||    
T  31082718 taatcatttccttaattatcgtgcacaaaccataaacaactaatattgtgagacggcgggagta 31082781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 243 - 294
Target Start/End: Original strand, 32678401 - 32678452
Alignment:
Q  243 cttatttactgaatttcatccaatttagctactccactaactacaattaata 294  Q
    |||||||| | |||||||||||| ||| ||||||||||||||||||||||||    
T  32678401 cttatttatttaatttcatccaacttaactactccactaactacaattaata 32678452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 331 - 397
Target Start/End: Original strand, 32678804 - 32678871
Alignment:
Q  331 aaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatg 397  Q
    ||||||||||||||||| ||||  |||| ||||||||| |||| |||||| |||||||||||||||||    
T  32678804 aaatcaacacaattaatcatttccttaataatcgtgtataaactttaaacgactattatttagagatg 32678871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 244 - 346
Target Start/End: Original strand, 17823920 - 17824022
Alignment:
Q  244 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaat 343  Q
    ||||||| | |||||||||||| ||| ||||| ||||||||||||||||||   | | | ||||||| |||||| |||||   |||||||||||||| ||    
T  17823920 ttatttatttaatttcatccaacttaactacttcactaactacaattaataaaggtattctagtaaaagatactaattttatcattgaaatcaacacgat 17824019  T
Q  344 taa 346  Q
    |||    
T  17824020 taa 17824022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 242 - 406
Target Start/End: Original strand, 31231727 - 31231893
Alignment:
Q  242 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 341  Q
    ||||||||| |||| || |||||| ||| |||||||||||||||||||||||| | |   || ||||||||||| | ||||| | ||  ||||| |||||    
T  31231727 ccttatttattgaactttatccaacttaactactccactaactacaattaataagggtgtttcagtaaatgatattaattttaccatcaaaatcgacaca 31231826  T
Q  342 attaat-attttgttaagaatcgtgta-caaaccttaaacaactattatttagagatggagggagta 406  Q
    ||| || ||||  |||| || |||| | ||| | |||||  ||||||||||||||| ||||||||||    
T  31231827 attcatcatttccttaataaccgtgcatcaacctttaaaagactattatttagagacggagggagta 31231893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 302 - 391
Target Start/End: Original strand, 36967418 - 36967508
Alignment:
Q  302 tttagtaaatgatactcattttgctattgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattattta 391  Q
    |||||||||||||| | ||||| | ||  ||||||||||||||||| ||||  |||| ||||||| | ||||||||||| |||||||||||    
T  36967418 tttagtaaatgatattaattttaccatcaaaatcaacacaattaatcatttccttaataatcgtgcataaaccttaaacgactattattta 36967508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 242 - 347
Target Start/End: Complemental strand, 396730 - 396625
Alignment:
Q  242 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 341  Q
    ||||||| | ||||||| ||||||| || ||||| || ||||||||||||||| |   | | |||||||||||||| ||||| |  |||||||||||| |    
T  396730 ccttattaattgaattttatccaatataactacttcattaactacaattaataaggatattgtagtaaatgatactaattttaccgttgaaatcaacata 396631  T
Q  342 attaat 347  Q
    ||||||    
T  396630 attaat 396625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 302 - 409
Target Start/End: Complemental strand, 2767350 - 2767242
Alignment:
Q  302 tttagtaaatgatactcattttgctattgaaatcaacacaattaa-tattttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggag 400  Q
    |||| ||||||||||| ||||| | ||  |||||||||||||||| |||||  |||| || |||| |  ||||| ||||||||| |||||||||| || |    
T  2767350 tttaataaatgatactaattttaccatcaaaatcaacacaattaattatttccttaataaccgtgcatcaacctcaaacaactactatttagagacgggg 2767251  T
Q  401 ggagtatta 409  Q
    |||||||||    
T  2767250 ggagtatta 2767242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 302 - 404
Target Start/End: Complemental strand, 39301000 - 39300894
Alignment:
Q  302 tttagtaaatgatactcattttgctattgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaacta---ttatttagagatg 397  Q
    |||||||||||||| | ||||| | || |||||||||| ||||||| ||||  |||| ||||||  ||||| ||||||| ||||   |||||||||||||    
T  39301000 tttagtaaatgatattaattttaccatcgaaatcaacataattaatcatttctttaataatcgtacacaaatcttaaacgactactattatttagagatg 39300901  T
Q  398 gagggag 404  Q
    |||||||    
T  39300900 gagggag 39300894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 279 - 347
Target Start/End: Original strand, 41092028 - 41092096
Alignment:
Q  279 ctaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaattaat 347  Q
    |||||||||||||||| | | | |||| ||||||||| | ||||| | |||||||||||||||||||||    
T  41092028 ctaactacaattaataagagtattttaataaatgatattaattttaccattgaaatcaacacaattaat 41092096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 302 - 388
Target Start/End: Complemental strand, 7703215 - 7703128
Alignment:
Q  302 tttagtaaatgatactcattttgctattgaaatcaacacaattaa-tattttgttaagaatcgtgtacaaaccttaaacaactattat 388  Q
    |||||||||||||| | ||||| | |||||||||||||||||||| |||||  |||| |||| |  |||||| |||||| ||||||||    
T  7703215 tttagtaaatgatattaattttaccattgaaatcaacacaattaattatttccttaataatcttacacaaactttaaacgactattat 7703128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 242 - 347
Target Start/End: Complemental strand, 22771954 - 22771849
Alignment:
Q  242 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 341  Q
    ||||||||| ||||||||||||||  ||  |||| |||||||||||||||||| | |   |||| ||||||| ||| ||||| | ||  |||||||| ||    
T  22771954 ccttatttattgaatttcatccaacataattacttcactaactacaattaataagggtgttttaataaatgacactaattttaccatcaaaatcaaccca 22771855  T
Q  342 attaat 347  Q
    ||||||    
T  22771854 attaat 22771849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 243 - 316
Target Start/End: Original strand, 35732119 - 35732192
Alignment:
Q  243 cttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatac 316  Q
    ||||| || ||||||||||| || ||  |||||||||||| ||||||||||| | | | |||||||||||||||    
T  35732119 cttatatattgaatttcatctaactttactactccactaattacaattaataggagtattttagtaaatgatac 35732192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 327 - 406
Target Start/End: Original strand, 6611779 - 6611859
Alignment:
Q  327 attgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 406  Q
    ||||||||||||| ||||||| ||||| |||| ||||||||  ||| ||||||| |||| ||||   ||||||||||||||    
T  6611779 attgaaatcaacataattaatcatttttttaataatcgtgtgtaaatcttaaacgactaatattgtaagatggagggagta 6611859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 72; Significance: 2e-32; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 244 - 406
Target Start/End: Complemental strand, 38405224 - 38405061
Alignment:
Q  244 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaat 343  Q
    ||||||| |||||||||||||| ||| |||| ||||||||||||||||||| | | | |||||||||||||| | ||||| | ||| ||||||||| |||    
T  38405224 ttatttattgaatttcatccaacttaactacaccactaactacaattaataagggtattttagtaaatgatattaattttaccatttaaatcaacagaat 38405125  T
Q  344 taat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 406  Q
    |||| ||||  |||| ||||||| ||||||||||||| ||||| ||||||||| ||||||||||    
T  38405124 taatcatttccttaataatcgtgcacaaaccttaaacgactataatttagagacggagggagta 38405061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 242 - 407
Target Start/End: Complemental strand, 49428466 - 49428300
Alignment:
Q  242 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 341  Q
    ||||||||| |||||||||||||| |||  ||||||||||||||||||||||| | | | |||||||||| ||| | ||||| | |||||||||||||||    
T  49428466 ccttatttattgaatttcatccaacttaattactccactaactacaattaataagggtattttagtaaattatattaattttaccattgaaatcaacaca 49428367  T
Q  342 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtat 407  Q
    | |||| ||||  |||| ||||||| | ||||||||||| ||||| ||||||||| |||||||||||    
T  49428366 aataatcatttccttaataatcgtgcaaaaaccttaaacgactataatttagagacggagggagtat 49428300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 244 - 401
Target Start/End: Original strand, 2653419 - 2653575
Alignment:
Q  244 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaat 343  Q
    ||||||| | |||||||||||||||| |||||||  ||||||||||||||| | | | |||| ||||||||||| ||||| | |||||||||||||||||    
T  2653419 ttatttattaaatttcatccaatttaactactcctttaactacaattaataagagtattttaataaatgatactaattttacaattgaaatcaacacaat 2653518  T
Q  344 taatattttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagg 401  Q
    ||||  ||| |||| |||| || ||||| ||||||||||||||||||||||| |||||    
T  2653519 taatcattt-ttaataatcatgcacaaatcttaaacaactattatttagagacggagg 2653575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 242 - 406
Target Start/End: Complemental strand, 33790855 - 33790690
Alignment:
Q  242 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 341  Q
    ||||||||| |||||||||||||| ||| |||||||||||||||||||||||| | |   ||||| |||||| ||| ||||| | ||  |||||||||||    
T  33790855 ccttatttattgaatttcatccaacttaactactccactaactacaattaataagggtgttttagcaaatgaaactaattttaccatcaaaatcaacaca 33790756  T
Q  342 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 406  Q
    |||||| ||||| |||| ||||||| | ||||||||||| ||||||||||||||| | ||||||||    
T  33790755 attaatcattttcttaataatcgtgcataaaccttaaacgactattatttagagacgaagggagta 33790690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 243 - 407
Target Start/End: Complemental strand, 52247551 - 52247386
Alignment:
Q  243 cttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaa 342  Q
    |||||||| |||||||||| ||| ||| |||||||||||||||||||||||| |   | ||||||||||  || | ||||| | |||||||| |||||||    
T  52247551 cttatttaatgaatttcattcaacttaactactccactaactacaattaataaggatattttagtaaattgtattaattttaccattgaaattaacacaa 52247452  T
Q  343 ttaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtat 407  Q
    ||||| ||||| |||| ||||||| |||| |||||||| ||||| ||||||||| |||||||||||    
T  52247451 ttaatcattttcttaataatcgtgcacaatccttaaacgactataatttagagacggagggagtat 52247386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 229 - 407
Target Start/End: Original strand, 32884784 - 32884964
Alignment:
Q  229 ttccactgttata-ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgcta 327  Q
    ||||||| ||||| ||||||||| |||||| ||||||| ||| |||||||||||||||||||||||| | |   |||| |||||| |||| ||| | | |    
T  32884784 ttccactattatatccttatttattgaattccatccaacttaactactccactaactacaattaataagagtgttttactaaatgctactaattctacca 32884883  T
Q  328 ttgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtat 407  Q
    |||||||||||||||||||| ||||| |||| ||||||| ||||||||||||| |||| ||||  |||| ||||| |||||    
T  32884884 ttgaaatcaacacaattaatcattttcttaataatcgtgcacaaaccttaaacgactaatattgtgagacggaggaagtat 32884964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 229 - 406
Target Start/End: Complemental strand, 17237434 - 17237255
Alignment:
Q  229 ttccactgttatacc-ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgcta 327  Q
    ||||||| ||||||| ||||||| |||||||||||||| ||| |||||||||||||||||||||||| |     ||||||||||| |||| ||||| | |    
T  17237434 ttccactattatacccttatttattgaatttcatccaacttaactactccactaactacaattaataaggttgttttagtaaatgttactaattttacca 17237335  T
Q  328 ttgaaatcaacacaattaa-tattttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 406  Q
    ||| ||||||||||||||| |||||| |||| |||| || ||||||||||||  |||| ||||  |||| ||||||||||    
T  17237334 ttgcaatcaacacaattaattattttcttaataatcatgcacaaaccttaaatgactagtattgtgagacggagggagta 17237255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 229 - 406
Target Start/End: Complemental strand, 47464503 - 47464324
Alignment:
Q  229 ttccactgttatacc-ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgcta 327  Q
    ||||||| ||||||| ||||||| |||||||||||||| ||| ||||||||| |||||||||||||| | |   ||||||||||| |||| ||||| | |    
T  47464503 ttccactattatacccttatttattgaatttcatccaacttaactactccaccaactacaattaataagagttttttagtaaatgctactaattttacca 47464404  T
Q  328 ttgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 406  Q
    |||||||||||||||||||| ||||  |||| |||||||  |||||||||||| |||| ||||  ||||| ||| |||||    
T  47464403 ttgaaatcaacacaattaatcatttccttaataatcgtgctcaaaccttaaacgactaatattgtgagatagagagagta 47464324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 244 - 409
Target Start/End: Complemental strand, 11907721 - 11907555
Alignment:
Q  244 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaat 343  Q
    ||||||| |||| ||||||||| ||| |||||||| ||||||||||||||| | |   |||||||||||||||| ||||| | ||  |||||||||||||    
T  11907721 ttatttattgaacttcatccaacttaactactccaataactacaattaataagggtgttttagtaaatgatactaattttaccatcaaaatcaacacaat 11907622  T
Q  344 taat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtatta 409  Q
    |||| ||||  |||| ||||||| |  |||||||||  ||||||||||||||| |||||||||||||    
T  11907621 taatcatttccttaataatcgtgcattaaccttaaatgactattatttagagacggagggagtatta 11907555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 242 - 406
Target Start/End: Original strand, 36985783 - 36985948
Alignment:
Q  242 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 341  Q
    ||||||||| |||||||||||||| |||  || || ||||||||||||||||| | | | |||||||||||||||| ||||| | |||||||||||||||    
T  36985783 ccttatttattgaatttcatccaacttaattattctactaactacaattaatacgggtattttagtaaatgatactaattttaccattgaaatcaacaca 36985882  T
Q  342 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 406  Q
    |||||| ||||  | || |||||| || ||| ||||||| | |||||||| |||| ||||||||||    
T  36985883 attaatcatttcctgaaaaatcgtataaaaatcttaaacgagtattattttgagacggagggagta 36985948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 242 - 406
Target Start/End: Complemental strand, 47773143 - 47772978
Alignment:
Q  242 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 341  Q
    ||||||||| |||| ||||||||| ||| |||||||||||||||||||||||| | |   |||||||||||||||| ||||| | ||  |||||||||||    
T  47773143 ccttatttattgaacttcatccaacttaactactccactaactacaattaataagggtgttttagtaaatgatactaattttaccatcaaaatcaacaca 47773044  T
Q  342 attaa-tattttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 406  Q
    ||||| |||||  |||| ||  ||| |  |||||||||| ||||||||||||||| ||||||||||    
T  47773043 attaattatttccttaataactgtgcatcaaccttaaacgactattatttagagacggagggagta 47772978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 242 - 407
Target Start/End: Complemental strand, 49176058 - 49175892
Alignment:
Q  242 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 341  Q
    ||||||||| ||||||| |||||| ||| ||||||| |||||||||||||||| |   | |||||||||||||||| |||||   |||||||||  ||||    
T  49176058 ccttatttattgaattttatccaacttaactactccgctaactacaattaataaggttattttagtaaatgatactaattttatcattgaaatctccaca 49175959  T
Q  342 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtat 407  Q
    |||||| ||||| |||| |||| || ||||||||||||| |||||||||| | |||  |||||||||    
T  49175958 attaatcattttcttaaaaatcatgcacaaaccttaaacgactattattttgtgataaagggagtat 49175892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 242 - 406
Target Start/End: Complemental strand, 7061788 - 7061623
Alignment:
Q  242 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 341  Q
    ||||||||| |||||||||| ||| |||  || ||||||||||||||||||||     | | |||||||||||||| ||||| | |||||||||||||||    
T  7061788 ccttatttattgaatttcattcaacttaattaatccactaactacaattaataaagatattatagtaaatgatactaattttaccattgaaatcaacaca 7061689  T
Q  342 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 406  Q
    |||||| ||||  |||| ||||||||||||||||||||| |||| ||||  ||||  |||||||||    
T  7061688 attaatcatttccttaataatcgtgtacaaaccttaaacgactaatattgtgagacagagggagta 7061623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 229 - 407
Target Start/End: Original strand, 34360638 - 34360818
Alignment:
Q  229 ttccactgttatacc-ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgcta 327  Q
    ||||||| ||||||| ||||||| ||||||| || ||| ||| |||||||||||||||||||||||| | |   ||||||||||| |||| ||||| | |    
T  34360638 ttccactattatacccttatttattgaattttattcaacttaactactccactaactacaattaataagagtgttttagtaaatgctactaattttacca 34360737  T
Q  328 ttgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtat 407  Q
    |||||||||| ||||||||| ||||  |||| ||||||| |||||| |||||| | || ||||  |||| |||||||||||    
T  34360738 ttgaaatcaatacaattaatcatttctttaataatcgtgcacaaactttaaacgattaatattgtgagacggagggagtat 34360818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 252 - 407
Target Start/End: Complemental strand, 52859913 - 52859757
Alignment:
Q  252 tgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaattaat-att 350  Q
    |||||||||| ||| ||| |||||||||||||||||||||||| |     |||||||||||||||| ||||| | ||  ||||||||||||||||| |||    
T  52859913 tgaatttcattcaacttaactactccactaactacaattaataaggatgttttagtaaatgatactaattttaccatcaaaatcaacacaattaatcatt 52859814  T
Q  351 ttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtat 407  Q
    |  |||| ||||||| | || |||||| | ||||||||||||||| |||||||||||    
T  52859813 tccttaataatcgtgcataagccttaagcgactattatttagagacggagggagtat 52859757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 244 - 406
Target Start/End: Complemental strand, 11288751 - 11288589
Alignment:
Q  244 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaat 343  Q
    ||||||| ||||||| |||||| ||| ||||||||| |||||||||||||| |   | |||||||||||||| | ||||||| ||||||||||| |||||    
T  11288751 ttatttattgaattttatccaacttaactactccaccaactacaattaataagat-attttagtaaatgatattaattttgccattgaaatcaatacaat 11288653  T
Q  344 taat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 406  Q
    |||| ||||| |||| ||||||  | ||||||||||| | ||| ||| ||||||||| ||||||    
T  11288652 taatcattttcttaataatcgtacataaaccttaaacgattataattcagagatggatggagta 11288589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 244 - 406
Target Start/End: Complemental strand, 5841550 - 5841386
Alignment:
Q  244 ttatttactgaatttcatccaatttag-ctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaa 342  Q
    ||||||| |||||||||||||| |||  |||||||||||||||||||||||| | | | |||||||||||||| | ||||| | ||| |||||||| |||    
T  5841550 ttatttattgaatttcatccaacttaaactactccactaactacaattaataagggtattttagtaaatgatattaattttaccattaaaatcaacgcaa 5841451  T
Q  343 ttaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 406  Q
    | ||| ||||  |||| | | ||| ||||||||||||| ||||| ||||||||| |||| |||||    
T  5841450 tcaatcatttccttaatagttgtgcacaaaccttaaacgactataatttagagacggagagagta 5841386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 244 - 410
Target Start/End: Original strand, 2066788 - 2066955
Alignment:
Q  244 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaat 343  Q
    ||||||| ||||||||||| || ||| |||| |||||||||| |||||||| | |   |||| ||||| ||||| | ||| | ||  |||||||||||||    
T  2066788 ttatttattgaatttcatctaacttaactaccccactaactaaaattaataagggtgttttaataaataatactaactttaccatcaaaatcaacacaat 2066887  T
Q  344 taat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtattat 410  Q
    |||| ||||  |||| ||||||| | ||||||||||| ||||||||||| ||||||| ||||||||||    
T  2066888 taatcatttccttaataatcgtgcataaaccttaaacgactattatttaaagatggatggagtattat 2066955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 244 - 406
Target Start/End: Original strand, 17114439 - 17114602
Alignment:
Q  244 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaat 343  Q
    ||||||| |||| ||| ||||| ||| |||||||||||||||||||||||| | |   |||||||||||||||| ||||| | ||  |||||||||||||    
T  17114439 ttatttattgaacttcctccaaattaactactccactaactacaattaataagggtgttttagtaaatgatactaattttaccatcaaaatcaacacaat 17114538  T
Q  344 taat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 406  Q
    |||| ||||  |||| ||  ||| |  |||||||||| ||||||||||| ||| ||||||||||    
T  17114539 taatcatttccttaataactgtgcatcaaccttaaacgactattatttaaagacggagggagta 17114602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 242 - 406
Target Start/End: Complemental strand, 16821455 - 16821290
Alignment:
Q  242 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 341  Q
    ||||||||| |||||||||| ||| |||  |||||||||||||| |||||||| |   | | |||||||||||||| |||||   |||||||||||||||    
T  16821455 ccttatttattgaatttcattcaacttaaatactccactaactataattaataaggatattatagtaaatgatactaattttatcattgaaatcaacaca 16821356  T
Q  342 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 406  Q
    |||||| |||   |||| ||||||| ||||||||||||| |||| | ||  |||| ||||||||||    
T  16821355 attaatcattgcattaataatcgtgcacaaaccttaaacgactaattttgtgagacggagggagta 16821290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 229 - 407
Target Start/End: Complemental strand, 6643798 - 6643618
Alignment:
Q  229 ttccactgttatacc-ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgcta 327  Q
    ||||||| ||||||| ||||||| |||||||||||||| ||| |||  |||||||||||||||||||       ||||||||||| |||| ||||| | |    
T  6643798 ttccactattatacccttatttattgaatttcatccaacttaactataccactaactacaattaataaagatgttttagtaaatgctactaattttacca 6643699  T
Q  328 ttgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtat 407  Q
    |||||||||||||||||||| ||||  |||| |||||||  ||||| |||||| |||| ||||  |||| |||| ||||||    
T  6643698 ttgaaatcaacacaattaatcatttccttaataatcgtgctcaaacattaaactactaatattgtgagacggagtgagtat 6643618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 302 - 395
Target Start/End: Original strand, 51625140 - 51625234
Alignment:
Q  302 tttagtaaatgatactcattttgctattgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagaga 395  Q
    ||||||||||| |||| ||||| | ||||||||||||||||||||| ||||| |||| ||||||| |||||| |||||| ||||| |||||||||    
T  51625140 tttagtaaatgttactaattttaccattgaaatcaacacaattaatcattttcttaataatcgtgcacaaactttaaacgactataatttagaga 51625234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 243 - 406
Target Start/End: Original strand, 6609759 - 6609924
Alignment:
Q  243 cttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaa 342  Q
    |||||||| ||| |||||||||| ||| |||||||| ||| |||||||||||       ||| |||||||||||| ||||| | ||  ||||||||||||    
T  6609759 cttatttattgagtttcatccaacttaactactccaataattacaattaataaagatgtttttgtaaatgatactaattttaccatcaaaatcaacacaa 6609858  T
Q  343 ttaat-attttgttaagaatcgtgtacaaaccttaaac-aactattatttagagatggagggagta 406  Q
    ||||| ||||  |||| ||||||| | |||| |||||| |||||||||||||||| ||||||||||    
T  6609859 ttaatcatttccttaataatcgtgcataaactttaaacgaactattatttagagacggagggagta 6609924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 243 - 372
Target Start/End: Complemental strand, 35380456 - 35380326
Alignment:
Q  243 cttatttactgaatttcatccaatttagctactccactaactacaattaat-atgtggactttagtaaatgatactcattttgctattgaaatcaacaca 341  Q
    |||||||| |||||||||||||| ||| | ||||||||||||||||||||| |||  |  ||||||||||| |||| ||||| | ||| ||||||||| |    
T  35380456 cttatttattgaatttcatccaacttaaccactccactaactacaattaataatgatg-ttttagtaaatgctactaattttaccattaaaatcaacata 35380358  T
Q  342 attaat-attttgttaagaatcgtgtacaaac 372  Q
    |||||| ||||| |||| ||||||||| ||||    
T  35380357 attaatcattttcttaataatcgtgtataaac 35380326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 243 - 393
Target Start/End: Complemental strand, 42617026 - 42616875
Alignment:
Q  243 cttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaa 342  Q
    |||||||| |||||||||| | | ||| |||||||||| |||||||||||||     | |||||||||||||| | ||||| | |||||||||||||||     
T  42617026 cttatttattgaatttcattcgacttaactactccacttactacaattaataaaaatattttagtaaatgatattaattttaccattgaaatcaacacag 42616927  T
Q  343 ttaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttaga 393  Q
    ||||| ||||  |||| |||| || ||||| ||||||| ||||| |||||||    
T  42616926 ttaatcatttctttaataatcatgcacaaaacttaaacgactataatttaga 42616875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 277 - 377
Target Start/End: Complemental strand, 42517727 - 42517626
Alignment:
Q  277 cactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaattaat-attttgttaagaatcgtgtacaaacctt 375  Q
    ||||||||| |||||||| | | | |||||||||||||  | ||||| | ||||||||||||||||||||| ||||| |||| |||||||||||||| ||    
T  42517727 cactaactataattaataagggtattttagtaaatgatcttaattttaccattgaaatcaacacaattaatcattttcttaataatcgtgtacaaacatt 42517628  T
Q  376 aa 377  Q
    ||    
T  42517627 aa 42517626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 252 - 408
Target Start/End: Complemental strand, 44536310 - 44536153
Alignment:
Q  252 tgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaattaat-att 350  Q
    ||||||||||| || |||||||||||||||||||||||||||| | |   |||| |||||  | || ||||| | ||| ||||||||||||||||| |||    
T  44536310 tgaatttcatctaacttagctactccactaactacaattaataagggtgttttaataaatcctgctaattttaccattaaaatcaacacaattaatcatt 44536211  T
Q  351 ttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtatt 408  Q
    |  |||| ||||||| | |||| |||||||| || ||||  |||| ||| ||||||||    
T  44536210 tccttaataatcgtgcataaactttaaacaattaatattgtgagagggaaggagtatt 44536153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 242 - 375
Target Start/End: Original strand, 49746958 - 49747091
Alignment:
Q  242 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 341  Q
    ||||||||| |||||||||||||| ||| |||||| |||||||| |||||||    | | ||||||||||  |||| |||||   |||||||||||||||    
T  49746958 ccttatttattgaatttcatccaacttaactactcaactaactataattaatgaaggtattttagtaaatactactaattttatcattgaaatcaacaca 49747057  T
Q  342 attaatattttgttaagaatcgtgtacaaacctt 375  Q
    ||||||  ||| |||| ||||||| |||| ||||    
T  49747058 attaattattttttaataatcgtgcacaagcctt 49747091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 244 - 379
Target Start/End: Complemental strand, 35311345 - 35311209
Alignment:
Q  244 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaat 343  Q
    ||||||| |||||||||||||| |||  ||||||||||||||||||||||| | |   | |||||||||  | | ||||| | |||||||| |||| |||    
T  35311345 ttatttattgaatttcatccaacttaattactccactaactacaattaataagagtgttctagtaaatgcaattaattttaccattgaaattaacataat 35311246  T
Q  344 taat-attttgttaagaatcgtgtacaaaccttaaac 379  Q
    |||| ||||  |||| ||||||| |||||||||||||    
T  35311245 taatcatttccttaataatcgtgcacaaaccttaaac 35311209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 242 - 389
Target Start/End: Original strand, 39397341 - 39397489
Alignment:
Q  242 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 341  Q
    ||||||||| | ||||||||||| |||| ||| || | ||||||||||||||||| ||| |||||||||||| | | | ||| | | ||||||||||| |    
T  39397341 ccttatttattaaatttcatccattttaactaatctagtaactacaattaatatggggattttagtaaatgacattaaatttaccaatgaaatcaacata 39397440  T
Q  342 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatt 389  Q
    |||||| ||||  ||||  |||||| |||||| |||||| | |||||||    
T  39397441 attaatcatttccttaaacatcgtgcacaaactttaaacgattattatt 39397489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 243 - 406
Target Start/End: Original strand, 43237241 - 43237405
Alignment:
Q  243 cttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaa 342  Q
    |||||||| |||||||||||||| ||| ||||| ||||||||| ||||||||       ||||||||||  |||| ||||| | |||||||| |||||||    
T  43237241 cttatttattgaatttcatccaacttaactacttcactaactataattaataatgattttttagtaaatattactaattttaccattgaaataaacacaa 43237340  T
Q  343 ttaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 406  Q
    ||||| ||||  |||| ||||||| | ||||||||||| |||| ||||  |||| ||||| ||||    
T  43237341 ttaatcatttccttaataatcgtgcataaaccttaaacgactaatattgtgagacggaggcagta 43237405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 278 - 400
Target Start/End: Complemental strand, 28500979 - 28500856
Alignment:
Q  278 actaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaattaat-attttgttaagaatcgtgtacaaacctta 376  Q
    ||||||| ||||||||| | | | |||||||||||||| | ||||| | ||||||||||||||||| ||| ||||  |||| ||||||| |||||| |||    
T  28500979 actaactgcaattaataagggtattttagtaaatgatattaattttaccattgaaatcaacacaatcaatcatttccttaataatcgtgcacaaacatta 28500880  T
Q  377 aacaactattatttagagatggag 400  Q
    |||  |||| ||||||||| ||||    
T  28500879 aacggctataatttagagacggag 28500856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 272 - 390
Target Start/End: Original strand, 30192232 - 30192351
Alignment:
Q  272 tactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaattaat-attttgttaagaatcgtgtacaa 370  Q
    ||||| ||||||||||||||||| |   | ||||| |||||| | | |||||   ||||||||||||||||||||| ||||| |||| ||||||||||||    
T  30192232 tactctactaactacaattaataagaatattttagcaaatgacattaattttataattgaaatcaacacaattaatcattttcttaaaaatcgtgtacaa 30192331  T
Q  371 accttaaacaactattattt 390  Q
    || ||||||| | |||||||    
T  30192332 acattaaacagcgattattt 30192351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 247 - 412
Target Start/End: Complemental strand, 2942763 - 2942598
Alignment:
Q  247 tttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaattaa 346  Q
    |||| |||| ||||| ||| ||| | |||||||||||||||||||||| |  |  ||||||||||| |||| |||||   || |||||||||||||||||    
T  2942763 tttattgaaattcattcaacttaaccactccactaactacaattaataaggtgt-tttagtaaatgctactaattttatcatcgaaatcaacacaattaa 2942665  T
Q  347 t-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtattatct 412  Q
    | ||||  |||| |||| | |||||||||||||| |||| ||||  |||| ||| | ||||||||||    
T  2942664 tcatttctttaataatcttatacaaaccttaaacgactaatattgtgagacggatgtagtattatct 2942598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 244 - 406
Target Start/End: Original strand, 22130042 - 22130209
Alignment:
Q  244 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaac----a 339  Q
    ||||||| |||||||||||||| |||  ||||||||||||||||||||||| |     ||| |||||||||||| ||| | | ||||||||||||    |    
T  22130042 ttatttattgaatttcatccaacttaattactccactaactacaattaataaggatgtttttgtaaatgatactaattataccattgaaatcaacacata 22130141  T
Q  340 caattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 406  Q
    |||||||| ||||  |||| || |||| ||||||||||||| |||| ||||  |||| ||| ||||||    
T  22130142 caattaatcatttccttaataaccgtgcacaaaccttaaacgactaatattgtgagacggatggagta 22130209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 304 - 390
Target Start/End: Complemental strand, 27880303 - 27880217
Alignment:
Q  304 tagtaaatgatactcattttgctattgaaatcaacacaattaatattttgttaagaatcgtgtacaaaccttaaacaactattattt 390  Q
    |||||||||||||| ||||| | ||||||||||||||||| |  ||||  |||| |||| | |||||||||||||| ||||||||||    
T  27880303 tagtaaatgatactaattttaccattgaaatcaacacaataatcatttatttaaaaatcatatacaaaccttaaacgactattattt 27880217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 245 - 406
Target Start/End: Original strand, 53346759 - 53346921
Alignment:
Q  245 tatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaatt 344  Q
    |||||| ||||||||||| || ||| ||||||||||||||| |||||||| | |   ||||||||||| || | ||||| | |||||||  ||||||||     
T  53346759 tatttattgaatttcatcaaacttaactactccactaactaaaattaataagggtgttttagtaaatgctattaattttaccattgaaactaacacaatc 53346858  T
Q  345 aa-tattttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 406  Q
    || |||||| |||| ||||||| |||||  |||||| |||| ||||   |||| |||||||||    
T  53346859 aattattttcttaataatcgtgcacaaattttaaacgactaatattgtaagatagagggagta 53346921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 242 - 347
Target Start/End: Complemental strand, 21240828 - 21240723
Alignment:
Q  242 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 341  Q
    ||||||||| |||||||||||||| ||| |||||| ||||||||||||||||| |      ||||||||||||||| ||||| | ||  |||||||||||    
T  21240828 ccttatttattgaatttcatccaacttaactactcaactaactacaattaataaggatgtgttagtaaatgatactaattttaccatcaaaatcaacaca 21240729  T
Q  342 attaat 347  Q
     |||||    
T  21240728 gttaat 21240723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 243 - 406
Target Start/End: Complemental strand, 38502605 - 38502441
Alignment:
Q  243 cttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaa 342  Q
    |||||||| ||||||| |||||| ||| ||||| || |||||| ||||||||   | | |||| ||||||||||| ||||| | ||  ||||||||||||    
T  38502605 cttatttattgaattttatccaacttaactactacattaactataattaataaaagtattttaataaatgatactaattttaccatcaaaatcaacacaa 38502506  T
Q  343 ttaa-tattttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 406  Q
    |||| |||||  |||| ||   || |  |||||||||| ||||||||||||||| |||| |||||    
T  38502505 ttaattatttccttaataactatgcatcaaccttaaacgactattatttagagacggagagagta 38502441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 242 - 389
Target Start/End: Complemental strand, 40122978 - 40122830
Alignment:
Q  242 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 341  Q
    ||||||||| |||||||| || || ||| || |||||||||||||||| |||| | |   ||||||||||| |||| |||||   ||| |||||||| ||    
T  40122978 ccttatttattgaatttcgtcgaacttaactgctccactaactacaatcaataagggtgttttagtaaatgctactaattttaacattaaaatcaacgca 40122879  T
Q  342 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatt 389  Q
    |||||| ||||  |||| ||||||| ||||| ||||||| |||| ||||    
T  40122878 attaatcatttccttaataatcgtgcacaaagcttaaacgactaatatt 40122830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 242 - 294
Target Start/End: Original strand, 51624783 - 51624835
Alignment:
Q  242 ccttatttactgaatttcatccaatttagctactccactaactacaattaata 294  Q
    ||||||||| |||||||||||||| ||| |||||||||||||||||| |||||    
T  51624783 ccttatttattgaatttcatccaacttaactactccactaactacaaataata 51624835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 243 - 294
Target Start/End: Complemental strand, 18741597 - 18741546
Alignment:
Q  243 cttatttactgaatttcatccaatttagctactccactaactacaattaata 294  Q
    |||||||| |||||||||||||| ||| |||||||| |||||||||||||||    
T  18741597 cttatttattgaatttcatccaacttaactactccattaactacaattaata 18741546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 242 - 403
Target Start/End: Original strand, 461955 - 462117
Alignment:
Q  242 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 341  Q
    ||||||||  ||||||| || ||| ||| ||||||| |||| ||||||||||| |   | |||||||||| ||| |  |||| | ||||||||||| |||    
T  461955 ccttatttgttgaattttattcaacttaactactccgctaattacaattaataaggatattttagtaaataatattacttttaccattgaaatcaataca 462054  T
Q  342 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggaggga 403  Q
    |||||| ||||| |||| |||  || ||||| ||||||  |||||||||| |||| |||||||    
T  462055 attaatcattttcttaaaaattatgcacaaatcttaaattactattatttcgagacggaggga 462117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 302 - 395
Target Start/End: Complemental strand, 8175644 - 8175550
Alignment:
Q  302 tttagtaaatgatactcattttgctattgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagaga 395  Q
    |||| ||||||||| | ||||| | ||||||||||||||||||| | ||||| |||| |||| || |||| || |||||||||||||||| ||||    
T  8175644 tttaataaatgatattaattttaccattgaaatcaacacaattattcatttttttaataatcatgcacaagccataaacaactattattttgaga 8175550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 244 - 385
Target Start/End: Complemental strand, 30682318 - 30682176
Alignment:
Q  244 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaat 343  Q
    ||||||| |||||||||| ||| ||| |||||| ||||||||||| ||||| |   | | |||||||||||| | ||||| | | | |||| ||||||||    
T  30682318 ttatttattgaatttcattcaaattaactactctactaactacaactaataaggatattatagtaaatgatattaattttaccaataaaattaacacaat 30682219  T
Q  344 taat-attttgttaagaatcgtgtacaaaccttaaacaactat 385  Q
    |||| ||||| |||| | ||||| | ||||||||||| |||||    
T  30682218 taatcatttttttaatagtcgtgcaaaaaccttaaacgactat 30682176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 242 - 344
Target Start/End: Complemental strand, 50264204 - 50264102
Alignment:
Q  242 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 341  Q
    ||||||||| |||||||||| ||| |||  || | |||||||||||||||||| | | | |||||||||||||  | |||||   |||||||||||||||    
T  50264204 ccttatttattgaatttcattcaacttaaatatttcactaactacaattaataagagtattttagtaaatgatgttaattttaacattgaaatcaacaca 50264105  T
Q  342 att 344  Q
    |||    
T  50264104 att 50264102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 280 - 379
Target Start/End: Complemental strand, 46396969 - 46396869
Alignment:
Q  280 taactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaa 378  Q
    ||||||||||||||| | |   ||||||||||| || | ||||| | ||||||||||||||||||||| ||||  ||||  |||||| ||||||||||||    
T  46396969 taactacaattaataagagtgttttagtaaatgctattaattttaccattgaaatcaacacaattaatcatttacttaatgatcgtgcacaaaccttaaa 46396870  T
Q  379 c 379  Q
    |    
T  46396869 c 46396869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 280 - 406
Target Start/End: Original strand, 4972595 - 4972722
Alignment:
Q  280 taactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaa 378  Q
    ||||||||||||||| | |   |||||||||||  ||  ||||| | ||||||||||||||||||||| ||||  |||| ||||||| ||||| ||||||    
T  4972595 taactacaattaataagagtgttttagtaaatgtcaccaatttttcaattgaaatcaacacaattaatcatttcattaataatcgtgcacaaatcttaaa 4972694  T
Q  379 caactattatttagagatggagggagta 406  Q
    | |||| ||||  |||| ||| ||||||    
T  4972695 cgactaatattgtgagacggatggagta 4972722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 254 - 391
Target Start/End: Original strand, 3689571 - 3689709
Alignment:
Q  254 aatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaattaat-atttt 352  Q
    ||||||||| || ||| | |||| |||||||| |||||||| | |   |||||||||||||||| ||||| | ||  ||||||| ||||||||| ||||     
T  3689571 aatttcatctaacttaacaactcaactaactataattaataagagtgttttagtaaatgatactaattttaccatcaaaatcaatacaattaatcatttc 3689670  T
Q  353 gttaagaatcgtgtacaaaccttaaacaactattattta 391  Q
     |||| || |||  | ||||||||||| |||||||||||    
T  3689671 tttaataaccgtacataaaccttaaacgactattattta 3689709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 242 - 348
Target Start/End: Complemental strand, 47359073 - 47358967
Alignment:
Q  242 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 341  Q
    ||||||||| |||||||||| ||| |||  ||||||||| |||||||||||||   | | ||||| |||| || || |||||   |||||||||||||||    
T  47359073 ccttatttattgaatttcattcaacttaattactccactgactacaattaataaaagtattttagaaaattattctaattttatcattgaaatcaacaca 47358974  T
Q  342 attaata 348  Q
    || ||||    
T  47358973 atcaata 47358967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 244 - 293
Target Start/End: Complemental strand, 31370422 - 31370373
Alignment:
Q  244 ttatttactgaatttcatccaatttagctactccactaactacaattaat 293  Q
    ||||||| ||| |||||||||| ||| ||||||||||||||| |||||||    
T  31370422 ttatttattgattttcatccaacttaactactccactaactataattaat 31370373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 302 - 406
Target Start/End: Complemental strand, 32470012 - 32469907
Alignment:
Q  302 tttagtaaatgatactcattttgctattgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggag 400  Q
    |||| ||||||||||| ||||| | ||| ||||||||||||||||| ||||| || | |||  || | ||| ||||||||| |||||||| |||||  ||    
T  32470012 tttaataaatgatactaattttaccattaaaatcaacacaattaatcattttctttaaaattatgcataaatcttaaacaaatattattttgagataaag 32469913  T
Q  401 ggagta 406  Q
    ||||||    
T  32469912 ggagta 32469907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 280 - 384
Target Start/End: Original strand, 52869107 - 52869212
Alignment:
Q  280 taactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaattaa-tattttgttaagaatcgtgtacaaaccttaaa 378  Q
    |||||||||||||||   | | |||| |||| |||| | || || |||||||||||||||||||||| |||||  |||| ||| ||| ||||||||||||    
T  52869107 taactacaattaataaaggtattttaataaacgatattaatcttactattgaaatcaacacaattaattatttccttaataattgtgcacaaaccttaaa 52869206  T
Q  379 caacta 384  Q
    | ||||    
T  52869207 cgacta 52869212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 242 - 294
Target Start/End: Original strand, 19265805 - 19265857
Alignment:
Q  242 ccttatttactgaatttcatccaatttagctactccactaactacaattaata 294  Q
    ||||| ||| |||||||||| ||| ||| ||||||||||||||| ||||||||    
T  19265805 ccttaattattgaatttcattcaacttaactactccactaactataattaata 19265857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 331 - 390
Target Start/End: Complemental strand, 25141949 - 25141889
Alignment:
Q  331 aaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattattt 390  Q
    ||||||||||| ||||| ||||| |||| |||||| || ||||||||||| ||||||||||    
T  25141949 aaatcaacacatttaatcattttcttaaaaatcgtatataaaccttaaacgactattattt 25141889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 67; Significance: 2e-29; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 242 - 407
Target Start/End: Original strand, 1701 - 1867
Alignment:
Q  242 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 341  Q
    ||||||||| ||||||| |||||| ||| |||||||||| ||||||||||||| | |   || ||||||||||||| ||||| | ||  ||||||||| |    
T  1701 ccttatttattgaatttaatccaacttaactactccactgactacaattaatacgggtgtttaagtaaatgatactaattttaccatcaaaatcaacata 1800  T
Q  342 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtat 407  Q
    |||||| ||||| |||| || |||||| ||| ||||||| |||||||||||||||||||||||||||    
T  1801 attaatcattttcttaataaccgtgtataaatcttaaacgactattatttagagatggagggagtat 1867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 66; Significance: 6e-29; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 242 - 406
Target Start/End: Complemental strand, 11656063 - 11655898
Alignment:
Q  242 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 341  Q
    ||||||||| |||||||||||||| ||  |||||||||||||||||||||||| | |   |||||||||||| ||| ||||| | ||  |||||||||||    
T  11656063 ccttatttattgaatttcatccaactttactactccactaactacaattaataagggtgttttagtaaatgacactaattttaccatcaaaatcaacaca 11655964  T
Q  342 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 406  Q
    |||||| ||||| |||| || |||| | ||||||||||| ||| ||||||||||| ||||||||||    
T  11655963 attaatcattttcttaataaccgtgcataaaccttaaacgactcttatttagagacggagggagta 11655898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 243 - 408
Target Start/End: Original strand, 13087528 - 13087694
Alignment:
Q  243 cttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaa 342  Q
    |||||||| |||||||||||||| |||  |||| ||||||||| |||||||| |     |||||||||||||| | ||||| | ||||||||||||||||    
T  13087528 cttatttattgaatttcatccaacttaattacttcactaactataattaataaggatgttttagtaaatgatattaattttaccattgaaatcaacacaa 13087627  T
Q  343 ttaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtatt 408  Q
    ||||| | ||| |||| |||||| ||  |||||||||| ||| ||||||||||| ||||||||||||    
T  13087628 ttaatcactttcttaataatcgtttatgaaccttaaacgacttttatttagagacggagggagtatt 13087694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 243 - 408
Target Start/End: Original strand, 29363304 - 29363470
Alignment:
Q  243 cttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaa 342  Q
    |||||||| |||||||||||||| ||| ||| ||| |||||||||||||||| |     ||||||||||||||||  |||| | ||  ||||||||||||    
T  29363304 cttatttattgaatttcatccaacttaactaatccgctaactacaattaataaggatgttttagtaaatgatactagttttaccatcaaaatcaacacaa 29363403  T
Q  343 ttaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtatt 408  Q
    ||||| ||||| |||| ||| ||| | ||||||||||| ||||||||||| ||| ||||||||||||    
T  29363404 ttaatcattttcttaataattgtgcataaaccttaaacgactattatttaaagacggagggagtatt 29363470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 242 - 389
Target Start/End: Original strand, 181553 - 181700
Alignment:
Q  242 ccttatttactgaatttcatccaatttagctactccactaactacaattaata-tgtggactttagtaaatgatactcattttgctattgaaatcaacac 340  Q
    ||||||||| |||||||||||||| ||| ||||||||||||||| |||||||| ||  |  ||||||||||  |||| ||||| ||||||||||||| ||    
T  181553 ccttatttattgaatttcatccaacttaactactccactaactataattaataatgatgt-tttagtaaatactactaattttactattgaaatcaatac 181651  T
Q  341 aattaatattttgttaagaatcgtgtacaaaccttaaacaactattatt 389  Q
    |||||||||||| |||| |||||||  ||||||||| || |||| ||||    
T  181652 aattaatatttttttaataatcgtgctcaaaccttagacgactaatatt 181700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 237 - 406
Target Start/End: Original strand, 23142659 - 23142829
Alignment:
Q  237 ttataccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatca 336  Q
    ||||||||| |||| ||||||||||| |  ||| ||||||||||| |||||||||||| | |   |||||||||||  |||  |||| | ||||||||||    
T  23142659 ttataccttctttattgaatttcatctagcttaactactccactacctacaattaataagggtgttttagtaaatgccactatttttaccattgaaatca 23142758  T
Q  337 acacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 406  Q
    ||||||||||| ||||| |||| ||||||| | |||||||||| ||||| ||||  |||| ||||||||||    
T  23142759 acacaattaatcattttcttaataatcgtggataaaccttaaataactaatattgtgagacggagggagta 23142829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 242 - 406
Target Start/End: Original strand, 6801928 - 6802093
Alignment:
Q  242 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 341  Q
    |||||||||  ||| ||||||||| ||| |||||||||||||||||||||||| | |   |||||||||||||| | ||||| | ||  ||||||||| |    
T  6801928 ccttatttatcgaacttcatccaacttaactactccactaactacaattaataagggcgttttagtaaatgatattaattttaccatcaaaatcaacata 6802027  T
Q  342 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 406  Q
    |||||| ||||| |||| || | || |  || ||||||| ||||||||||||||||||||||||||    
T  6802028 attaatcattttcttaataaccatgcatcaatcttaaacgactattatttagagatggagggagta 6802093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 242 - 406
Target Start/End: Original strand, 15058114 - 15058279
Alignment:
Q  242 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 341  Q
    ||||||||| |||||||||||||| |||  |||| |||||||||||||||||| | | | |||||||||||  ||| ||||| | |||||||| |||  |    
T  15058114 ccttatttattgaatttcatccaacttaaatacttcactaactacaattaataagggtattttagtaaatgccactaattttaccattgaaattaactta 15058213  T
Q  342 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 406  Q
    |||||| ||||| |||| ||||||| ||||||||||||| |||| ||||  ||||  |||||||||    
T  15058214 attaatcattttcttaataatcgtgcacaaaccttaaacgactaatattgcgagacagagggagta 15058279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 237 - 395
Target Start/End: Complemental strand, 1956101 - 1955942
Alignment:
Q  237 ttataccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatca 336  Q
    |||||||||||||| ||||||| ||| ||   ||||||| |||||||||||||||||| | | |  ||||||||||||||| ||||| | ||||||||||    
T  1956101 ttataccttatttattgaattttatcgaacacagctacttcactaactacaattaataagagtatattagtaaatgatactaattttaccattgaaatca 1956002  T
Q  337 acacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagaga 395  Q
    | |||||||||  |||| ||||  |  ||||| ||||||||||| |||||||||| ||||    
T  1956001 atacaattaatctttttcttaattactgtgtataaaccttaaacgactattattttgaga 1955942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 230 - 395
Target Start/End: Complemental strand, 3291898 - 3291731
Alignment:
Q  230 tccactgttatac-cttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctat 328  Q
    |||| |||||||| |||||||| ||||||| |||||| ||| ||||| ||||||||||||||||||   | | |||||||||| ||||| || || | ||    
T  3291898 tccattgttatacacttatttattgaattttatccaacttaactacttcactaactacaattaataaaggtattttagtaaataatactaatattaccat 3291799  T
Q  329 tgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagaga 395  Q
    | ||||| | ||||||||| ||||  |||| ||||||| | ||||||||||| |||||||||||||||    
T  3291798 taaaatcgatacaattaatcatttccttaataatcgtgcaaaaaccttaaacgactattatttagaga 3291731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 244 - 407
Target Start/End: Original strand, 21010172 - 21010340
Alignment:
Q  244 ttatttactgaatttcatccaatttagctactccactaa----ctacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaaca 339  Q
    ||||||| |||||||||||||| ||| ||||||||||||    |||||||| ||| | |   |||||||||||||||| ||||| | ||  |||| ||||    
T  21010172 ttatttattgaatttcatccaacttaactactccactaattaactacaatttataagggtgttttagtaaatgatactaatttttccatcaaaattaaca 21010271  T
Q  340 caattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtat 407  Q
    |||||||| ||||| |||| ||| ||| | ||||||||||||||||||||||||| | ||||| |||||    
T  21010272 caattaatcattttcttaataattgtgcataaaccttaaacaactattatttagaaacggaggaagtat 21010340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 231 - 379
Target Start/End: Original strand, 1781789 - 1781937
Alignment:
Q  231 ccactgttataccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattg 330  Q
    ||||| ||||||||| |||| |||||||||| ||| ||| | |||||||||||||||||||||| | |   ||||||||||| |||| ||||| | ||||    
T  1781789 ccactattataccttttttattgaatttcattcaacttaac-actccactaactacaattaataagggtgttttagtaaatgctactaattttaccattg 1781887  T
Q  331 aaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaac 379  Q
    | ||||||| ||||||| ||||| |||| ||||||| | |||||||||||    
T  1781888 agatcaacataattaatcattttcttaacaatcgtgcataaaccttaaac 1781937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 244 - 408
Target Start/End: Complemental strand, 6834484 - 6834319
Alignment:
Q  244 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaat 343  Q
    ||||||| ||||| |||| ||||||| ||| || |||||||| ||||||||   |   |||||||||||||| | ||||  ||||  |||||||||||||    
T  6834484 ttatttattgaatctcattcaatttatctattctactaactataattaataaaggtgttttagtaaatgatattaatttgactatcaaaatcaacacaat 6834385  T
Q  344 taat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtatt 408  Q
    |||| ||||| |||| ||||||| | |||| ||||| |||||||||||||| | ||||||||||||    
T  6834384 taattattttcttaataatcgtgcataaactttaaagaactattatttagaaacggagggagtatt 6834319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 231 - 389
Target Start/End: Complemental strand, 3720370 - 3720210
Alignment:
Q  231 ccactgttatac-cttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctatt 329  Q
    ||||| |||||| ||||||||||||||||||| ||| ||| ||| |||||||||||||||||||| | |   ||| ||||||  |||  |||||   |||    
T  3720370 ccactattatactcttatttactgaatttcattcaacttaactattccactaactacaattaataagagtgtttttgtaaatactacaaattttataatt 3720271  T
Q  330 gaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatt 389  Q
    |||||||||||||||||| ||||  |||| ||||||| ||||||||||||| |||| ||||    
T  3720270 gaaatcaacacaattaatcatttcattaataatcgtgcacaaaccttaaacgactaatatt 3720210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 242 - 407
Target Start/End: Complemental strand, 31894327 - 31894161
Alignment:
Q  242 ccttatttactgaatttcatccaatttagctactccactaactacaattaata-tgtggactttagtaaatgatactcattttgctattgaaatcaacac 340  Q
    ||||||||| | |||||||||||| ||| ||||| |||||||||||||||||| ||  |  ||||||||||| |||| ||||| | ||||||||||||||    
T  31894327 ccttatttattaaatttcatccaacttaactacttcactaactacaattaataatgacgt-tttagtaaatgctactaattttaccattgaaatcaacac 31894229  T
Q  341 aattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtat 407  Q
    ||||||| ||||| |||| |||| |  ||||| ||||||| | || ||||  |||| |||||||||||    
T  31894228 aattaatcattttcttaataatcatacacaaatcttaaacgattaatattgtgagacggagggagtat 31894161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 242 - 363
Target Start/End: Complemental strand, 24983566 - 24983444
Alignment:
Q  242 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 341  Q
    ||||||||| ||||||||| |||| ||| |||||||||||||||||||||||| | |   |||||||||||| ||| ||||| | |||||||||||| ||    
T  24983566 ccttatttattgaatttcacccaacttaactactccactaactacaattaataagggtgttttagtaaatgacactaattttaccattgaaatcaactca 24983467  T
Q  342 attaat-attttgttaagaatcg 363  Q
    | |||| ||||  ||||||||||    
T  24983466 actaatcatttccttaagaatcg 24983444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 255 - 407
Target Start/End: Complemental strand, 32440749 - 32440596
Alignment:
Q  255 atttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaattaat-attttg 353  Q
    ||||||||||| ||| |||||| ||||| ||||||||||| | |   |||||||||| ||||| ||||| | ||  ||||||||||||||||| ||||      
T  32440749 atttcatccaacttaactactctactaattacaattaataagggtgttttagtaaataatactaattttaccatcaaaatcaacacaattaatcatttcc 32440650  T
Q  354 ttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtat 407  Q
    | || || |||| | ||| ||||||| ||||||||||||||| |||||||||||    
T  32440649 taaataaccgtgcataaatcttaaacgactattatttagagacggagggagtat 32440596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 243 - 378
Target Start/End: Original strand, 13909422 - 13909558
Alignment:
Q  243 cttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaa 342  Q
    |||||||| | ||||||||| || |||  ||||||||||||||||||||||| | | | |||||||||||  ||| ||||| | |||||||||||||||     
T  13909422 cttatttattcaatttcatctaacttaattactccactaactacaattaataagggtattttagtaaatgtcactaattttaccattgaaatcaacacat 13909521  T
Q  343 ttaat-attttgttaagaatcgtgtacaaaccttaaa 378  Q
    ||||| ||||  |||| ||||||| |||||| |||||    
T  13909522 ttaatcatttccttaataatcgtgcacaaactttaaa 13909558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 242 - 407
Target Start/End: Original strand, 15582280 - 15582446
Alignment:
Q  242 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 341  Q
    ||||||||| ||||||||||  || ||| | ||| ||||||||||||  | ||  || | |||| ||||||||||| ||||| | |||||||||||||||    
T  15582280 ccttatttattgaatttcattaaacttaaccacttcactaactacaacaagtaaatgtattttaataaatgatactgattttaccattgaaatcaacaca 15582379  T
Q  342 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtat 407  Q
    |||||| |||   ||||  || || |||||| ||||||| ||||||||||  ||||||||| |||||    
T  15582380 attaatcattcatttaaatattgtctacaaatcttaaacgactattattttaagatggaggaagtat 15582446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 244 - 294
Target Start/End: Complemental strand, 34657677 - 34657627
Alignment:
Q  244 ttatttactgaatttcatccaatttagctactccactaactacaattaata 294  Q
    ||||||| |||||||||||||| ||| ||||||||||||||||||||||||    
T  34657677 ttatttattgaatttcatccaacttaactactccactaactacaattaata 34657627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 254 - 347
Target Start/End: Complemental strand, 1063708 - 1063615
Alignment:
Q  254 aatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaattaat 347  Q
    ||||||||  || ||| ||||||||||||||||||||| |  | | | |||||||||| ||||| |||||   |||||||||||||||||||||    
T  1063708 aatttcatttaacttaactactccactaactacaattactcagagtattttagtaaataatactaattttatcattgaaatcaacacaattaat 1063615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 242 - 323
Target Start/End: Complemental strand, 11143704 - 11143623
Alignment:
Q  242 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcatttt 323  Q
    ||||||||| |||| ||||||||| ||| ||||| ||||||||| |||||||| | |   |||||||||||||||| |||||    
T  11143704 ccttatttattgaacttcatccaacttaactacttcactaactataattaataagggtgatttagtaaatgatactaatttt 11143623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 243 - 323
Target Start/End: Original strand, 30716898 - 30716978
Alignment:
Q  243 cttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcatttt 323  Q
    |||||||| ||||||| |||||| ||  |||||||||||||||||||||||| | |   || ||||||||||||| |||||    
T  30716898 cttatttattgaattttatccaactttactactccactaactacaattaataagggtgtttaagtaaatgatactaatttt 30716978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 242 - 293
Target Start/End: Original strand, 15046121 - 15046171
Alignment:
Q  242 ccttatttactgaatttcatccaatttagctactccactaactacaattaat 293  Q
    ||||||||| |||||||||||||| | | |||||||||||||||||||||||    
T  15046121 ccttatttattgaatttcatccaactaa-ctactccactaactacaattaat 15046171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 242 - 347
Target Start/End: Original strand, 1225045 - 1225149
Alignment:
Q  242 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 341  Q
    ||||||||| | ||||| |||||| ||| || || ||||||||| |||||||| |   | |||||||||| ||| | ||||| ||||| |||||||||||    
T  1225045 ccttatttattcaattt-atccaacttaacttcttcactaactaaaattaataagaatattttagtaaataatattaattttactatttaaatcaacaca 1225143  T
Q  342 attaat 347  Q
    ||||||    
T  1225144 attaat 1225149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 302 - 347
Target Start/End: Complemental strand, 4590655 - 4590610
Alignment:
Q  302 tttagtaaatgatactcattttgctattgaaatcaacacaattaat 347  Q
    ||||||||| |||| | ||||| |||||||||||||||||||||||    
T  4590655 tttagtaaacgatattaattttactattgaaatcaacacaattaat 4590610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 245 - 294
Target Start/End: Original strand, 5302351 - 5302400
Alignment:
Q  245 tatttactgaatttcatccaatttagctactccactaactacaattaata 294  Q
    |||||| |||| ||||||||| ||| |||||||| |||||||||||||||    
T  5302351 tatttattgaacttcatccaacttaactactccattaactacaattaata 5302400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 242 - 294
Target Start/End: Complemental strand, 13206949 - 13206897
Alignment:
Q  242 ccttatttactgaatttcatccaatttagctactccactaactacaattaata 294  Q
    ||||||||| |||||| ||  ||||||| | ||||||||||||||||||||||    
T  13206949 ccttatttattgaattacactcaatttaacaactccactaactacaattaata 13206897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0330 (Bit Score: 64; Significance: 1e-27; HSPs: 1)
Name: scaffold0330
Description:

Target: scaffold0330; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 244 - 406
Target Start/End: Original strand, 5389 - 5552
Alignment:
Q  244 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaat 343  Q
    ||||||| |||||||||||||| ||| ||||||||||||||| |||||||| |   | |||||||||||||| | ||||| | |||||| |||||||| |    
T  5389 ttatttattgaatttcatccaacttaactactccactaactaaaattaataaggatattttagtaaatgatattaattttaccattgaattcaacacagt 5488  T
Q  344 taat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 406  Q
    |||| ||||| |||| |||| |||||||||||||||| | ||| ||||||||||| | ||||||    
T  5489 taatcattttcttaataatcatgtacaaaccttaaacgattataatttagagatgaatggagta 5552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 63; Significance: 4e-27; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 242 - 395
Target Start/End: Original strand, 39691487 - 39691641
Alignment:
Q  242 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 341  Q
    ||||||||| |||||||||| ||| ||  |||||||||||||| ||||||||| | | | |||||||||||||| | |||||   |||||||||||||||    
T  39691487 ccttatttattgaatttcattcaactttactactccactaactgcaattaataagagtattttagtaaatgatattaattttatcattgaaatcaacaca 39691586  T
Q  342 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagaga 395  Q
    |||||| ||||| |||| ||||||| ||||||||||||| | ||| |||||||||    
T  39691587 attaatcattttcttaataatcgtgcacaaaccttaaacgattataatttagaga 39691641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 242 - 401
Target Start/End: Original strand, 45235578 - 45235738
Alignment:
Q  242 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 341  Q
    ||||||||| ||||||||||| || ||| ||| | || ||||||||||||||| | |   |||||||||||||| | ||||| | |||||||||||||||    
T  45235578 ccttatttattgaatttcatcaaacttaactatttcattaactacaattaataagggtgttttagtaaatgatattaattttaccattgaaatcaacaca 45235677  T
Q  342 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagg 401  Q
    || ||| ||||  |||| ||||||| ||||||||||||| ||||||||||||||| |||||    
T  45235678 atcaatcatttccttaataatcgtgcacaaaccttaaacgactattatttagagacggagg 45235738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 244 - 410
Target Start/End: Original strand, 16463688 - 16463855
Alignment:
Q  244 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaat 343  Q
    ||||||| | ||||||||| || ||  |||||||||||||||||||||||| | |   |||||||||||||||| ||||| | ||  |||||||||||||    
T  16463688 ttatttattaaatttcatcaaactttactactccactaactacaattaataagggtgttttagtaaatgatactaattttaccatcaaaatcaacacaat 16463787  T
Q  344 taat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtattat 410  Q
    |||| ||||  |||| || |||| | ||||||||||| ||||||||||||||| || |||||||||||    
T  16463788 taatcatttccttaataaccgtgcataaaccttaaacgactattatttagagacggggggagtattat 16463855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 242 - 395
Target Start/End: Original strand, 37322425 - 37322580
Alignment:
Q  242 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 341  Q
    ||||||||| ||||||||||| || ||| |||||||||||||||||||||||| | | | |||| ||||||||| | ||||| | |||||||||||||||    
T  37322425 ccttatttattgaatttcatctaacttaactactccactaactacaattaataagggtattttaataaatgatattaattttaccattgaaatcaacaca 37322524  T
Q  342 attaat-atttt-gttaagaatcgtgtacaaaccttaaacaactattatttagaga 395  Q
    || ||| |||||  |||| ||||||| | ||||||||||| ||||| |||||||||    
T  37322525 atcaatcattttccttaataatcgtgcataaaccttaaacgactataatttagaga 37322580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 237 - 386
Target Start/End: Original strand, 16805873 - 16806023
Alignment:
Q  237 ttataccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatca 336  Q
    |||| |||||| || | ||||| |||||| ||| | |||||||||||||||||||||| |   | |||||||||||||||| ||||| ||||| ||||||    
T  16805873 ttatcccttatctattaaatttaatccaacttaacaactccactaactacaattaataaggatattttagtaaatgatactaattttactattaaaatca 16805972  T
Q  337 acacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactatt 386  Q
    ||||||||||| ||||  |||| ||||||| ||||||||||||| ||||||    
T  16805973 acacaattaatcatttctttaataatcgtgcacaaaccttaaactactatt 16806023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 237 - 386
Target Start/End: Original strand, 16845154 - 16845304
Alignment:
Q  237 ttataccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatca 336  Q
    |||| |||||| || | ||||| |||||| ||| | |||||||||||||||||||||| |   | |||||||||||||||| ||||| ||||| ||||||    
T  16845154 ttatcccttatctattaaatttaatccaacttaacaactccactaactacaattaataaggatattttagtaaatgatactaattttactattaaaatca 16845253  T
Q  337 acacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactatt 386  Q
    ||||||||||| ||||  |||| ||||||| ||||||||||||| ||||||    
T  16845254 acacaattaatcatttctttaataatcgtgcacaaaccttaaactactatt 16845304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 242 - 406
Target Start/End: Original strand, 25637478 - 25637642
Alignment:
Q  242 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 341  Q
    ||||||||| | |||||||||||| ||| |||||||  |||||||||||||||   |   |||||||||||| ||| ||||| | ||  |||||||||||    
T  25637478 ccttatttattaaatttcatccaacttaactactcctataactacaattaataaaggtgttttagtaaatgacactaattttaccatcaaaatcaacaca 25637577  T
Q  342 attaatattttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 406  Q
    ||||||  |||  | | ||||||| | ||||||||||||||||||||||||||| ||| ||||||    
T  25637578 attaatcatttccttataatcgtgcataaaccttaaacaactattatttagagacggatggagta 25637642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 229 - 378
Target Start/End: Complemental strand, 5789778 - 5789627
Alignment:
Q  229 ttccactgttatacc-ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgcta 327  Q
    ||||||| ||||||| ||||||| |||||||||||||| ||| ||| | |||||||||||||||||| | |   |||||||||||  ||| ||||| |||    
T  5789778 ttccactattataccattatttattgaatttcatccaacttaactatttcactaactacaattaataagggtgttttagtaaatgccactaattttacta 5789679  T
Q  328 ttgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaa 378  Q
    ||||| |||| ||||||||| ||||  |||| ||||||| ||||||||||||    
T  5789678 ttgaattcaatacaattaatcatttccttaataatcgtgcacaaaccttaaa 5789627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 229 - 406
Target Start/End: Original strand, 17695313 - 17695492
Alignment:
Q  229 ttccactgttatacc-ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgcta 327  Q
    ||||||| ||||||| ||||||| |||||||||||||| ||| |||||| |||||||| |||||||| |   | ||| ||||||||||   ||||| | |    
T  17695313 ttccactattatacccttatttattgaatttcatccaacttaactactctactaactataattaataagaatatttttgtaaatgatatcaattttacca 17695412  T
Q  328 ttgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 406  Q
    |||||||||| ||||||||| ||||  |||| ||||||| ||||||||||||| | ||| |||| |||| ||| ||||||    
T  17695413 ttgaaatcaatacaattaatcatttccttaataatcgtgcacaaaccttaaacgattataattttgagacggatggagta 17695492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 242 - 407
Target Start/End: Original strand, 39785582 - 39785751
Alignment:
Q  242 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgata---ctcattttgctattgaaatcaac 338  Q
    ||||||||| |||| ||||||||| ||| |||||||| ||||||||||||||| | |   ||||||||||||||   || ||||| | ||  ||||||||    
T  39785582 ccttatttattgaacttcatccaacttaactactccattaactacaattaataagagtgttttagtaaatgatagtactaattttaccatcaaaatcaac 39785681  T
Q  339 acaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtat 407  Q
    ||||||||| ||||  |||| || |||| |  |||||||||| ||||||||||||||| |||||||||||    
T  39785682 acaattaatcatttccttaataaccgtgcatcaaccttaaacgactattatttagagacggagggagtat 39785751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 242 - 410
Target Start/End: Original strand, 36794281 - 36794450
Alignment:
Q  242 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 341  Q
    ||||||||| |||| ||||||||| ||| ||||||||||||||||| |||||| | |   ||||||||| |||||| ||||| | ||  |||||||||||    
T  36794281 ccttatttattgaacttcatccaacttaactactccactaactacagttaataagggcgttttagtaaaagatactaattttaccatcaaaatcaacaca 36794380  T
Q  342 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtattat 410  Q
    |||||| ||||  |||| || | || |  || ||||||| ||||||||||||||| |||| |||||||||    
T  36794381 attaatcatttccttaataaccatgcatcaatcttaaacgactattatttagagacggagagagtattat 36794450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 242 - 409
Target Start/End: Complemental strand, 14523488 - 14523320
Alignment:
Q  242 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 341  Q
    ||||||| | ||||||||||| || ||| |||||||||||||||||||||||| |   | |||||||||||||| | ||||| | |||||||||||||||    
T  14523488 ccttattaattgaatttcatctaacttaactactccactaactacaattaataaggatattttagtaaatgatattaattttaccattgaaatcaacaca 14523389  T
Q  342 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtatta 409  Q
    |  ||| ||||  |||| || | || | |||| |||||| |||||| |||||||| ||||||| |||||    
T  14523388 aaaaatcatttccttaataaccttgcataaactttaaacgactattttttagagacggagggattatta 14523320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 242 - 408
Target Start/End: Complemental strand, 15359203 - 15359036
Alignment:
Q  242 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 341  Q
    ||||||||| |||| ||||||||| ||| |||||||||||||||||||||||| | |   |||||||||||||| | |||||   ||  |||||||||||    
T  15359203 ccttatttattgaacttcatccaacttaactactccactaactacaattaataagggtgttttagtaaatgatattaattttatcatcaaaatcaacaca 15359104  T
Q  342 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtatt 408  Q
    |||||| || || |||| || |||| |  |||||||||| ||||||||||| ||| ||| | ||||||    
T  15359103 attaatcatcttcttaataaccgtgcatcaaccttaaacgactattatttaaagacggaagaagtatt 15359036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 229 - 347
Target Start/End: Original strand, 35313870 - 35313989
Alignment:
Q  229 ttccactgttatac-cttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgcta 327  Q
    ||||||| |||||| |||||||| ||||||||||| || ||| |||||||||||||||||||||||| |    ||||| |||||  |||| ||||| | |    
T  35313870 ttccactattatactcttatttattgaatttcatcaaacttaactactccactaactacaattaataaggttgctttaataaatactactaattttacca 35313969  T
Q  328 ttgaaatcaacacaattaat 347  Q
    ||||||||||||||||||||    
T  35313970 ttgaaatcaacacaattaat 35313989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 327 - 408
Target Start/End: Complemental strand, 26607999 - 26607917
Alignment:
Q  327 attgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtatt 408  Q
    ||||||||||||||||||||| ||||| |||| ||||||| ||||||||||||| | ||| ||||||||| ||||||||||||    
T  26607999 attgaaatcaacacaattaatcattttcttaataatcgtgcacaaaccttaaactattataatttagagaaggagggagtatt 26607917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 246 - 395
Target Start/End: Original strand, 43410427 - 43410577
Alignment:
Q  246 atttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaatta 345  Q
    ||||| |||||||||| ||| ||| |||||||| ||||||||||||||| |   | |||||||||||||| | |||||   ||||| |||||||||||||    
T  43410427 atttattgaatttcattcaacttaactactccattaactacaattaataaggatattttagtaaatgatattaattttatcattgatatcaacacaatta 43410526  T
Q  346 at-attttgttaagaatcgtgtacaaaccttaaacaactattatttagaga 395  Q
    || ||||  |||| ||||||| |||||| |||||  ||||| |||||||||    
T  43410527 ataatttccttaataatcgtgcacaaacattaaaggactataatttagaga 43410577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 244 - 407
Target Start/End: Complemental strand, 36354557 - 36354393
Alignment:
Q  244 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaat 343  Q
    ||||||| |||||||||||||| ||| |||||||||||||||||||||||| | |   || | ||||| ||||| ||||| | ||  ||||||||||||     
T  36354557 ttatttattgaatttcatccaacttaactactccactaactacaattaataagagtgtttcaataaataatactaattttaccatcaaaatcaacacaac 36354458  T
Q  344 taat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtat 407  Q
    || | ||||  |||| ||||||  | ||||||||||  ||||||||||||||| ||| |||||||    
T  36354457 tagtcatttccttaataatcgtacataaaccttaaatgactattatttagagacggatggagtat 36354393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 252 - 386
Target Start/End: Complemental strand, 43115908 - 43115773
Alignment:
Q  252 tgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaattaat-att 350  Q
    |||||||||| ||| ||| ||||||||||||||||||| |||| | | | ||||||||||| |||| | |||   ||||||||||||||||||||| |||    
T  43115908 tgaatttcattcaacttaactactccactaactacaataaataagagtattttagtaaatgctactaactttatcattgaaatcaacacaattaatcatt 43115809  T
Q  351 ttgttaagaatcgtgtacaaaccttaaacaactatt 386  Q
    |  |||| ||||| | |||||| |||||| ||||||    
T  43115808 tctttaataatcgcgcacaaactttaaacgactatt 43115773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 242 - 347
Target Start/End: Complemental strand, 8947168 - 8947063
Alignment:
Q  242 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 341  Q
    ||||||||| |||||||||||||| ||| ||||||||||||||| |||||||| |     ||||||||||  |||| |||||   |||||||||||||||    
T  8947168 ccttatttattgaatttcatccaacttaactactccactaactataattaataaggatgttttagtaaatattactaattttatcattgaaatcaacaca 8947069  T
Q  342 attaat 347  Q
    ||||||    
T  8947068 attaat 8947063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 302 - 390
Target Start/End: Original strand, 19937734 - 19937823
Alignment:
Q  302 tttagtaaatgatactcattttgctattgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattattt 390  Q
    |||||||||||||| | ||||| | ||||||||||||||||||||| ||||  |||| ||||||| ||||||||||||| ||||| ||||    
T  19937734 tttagtaaatgatattaattttaccattgaaatcaacacaattaatcatttccttaataatcgtgcacaaaccttaaacgactataattt 19937823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 244 - 364
Target Start/End: Complemental strand, 17346476 - 17346356
Alignment:
Q  244 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaat 343  Q
    ||||||| |||||||| ||||| ||| ||||||||||||||||||||||||     | |||| ||||||||| | ||||| || |||||||||| | |||    
T  17346476 ttatttattgaatttcttccaacttaactactccactaactacaattaataaaaatattttaataaatgatattaattttacttttgaaatcaaaataat 17346377  T
Q  344 taatattttgttaagaatcgt 364  Q
    ||||||||  |||| ||||||    
T  17346376 taatatttctttaataatcgt 17346356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 242 - 385
Target Start/End: Complemental strand, 31448809 - 31448665
Alignment:
Q  242 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 341  Q
    ||||||||| |||||||||||||| ||| ||| | |||||||| |||||| || | |   ||||||||||||  || ||||| | ||  |||||||||||    
T  31448809 ccttatttattgaatttcatccaacttaactatttcactaactgcaattagtaagggtgttttagtaaatgactctaattttaccatcaaaatcaacaca 31448710  T
Q  342 attaat-attttgttaagaatcgtgtacaaaccttaaacaactat 385  Q
    |||||| ||||  |||| ||||||| ||||||||||||| |||||    
T  31448709 attaatcatttccttaataatcgtgcacaaaccttaaacgactat 31448665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 243 - 401
Target Start/End: Complemental strand, 34120552 - 34120395
Alignment:
Q  243 cttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaa 342  Q
    |||| ||| |||||||||||||| ||| ||| ||||||||||||||||||||  |  | |||||||||| |||||  |||| | ||  ||||||||||||    
T  34120552 cttacttattgaatttcatccaacttaactattccactaactacaattaataaat--attttagtaaataatactagttttaccatcaaaatcaacacaa 34120455  T
Q  343 ttaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagg 401  Q
    ||||| ||||| |||| |||| || | |||| ||||||   ||||||||||||| |||||    
T  34120454 ttaatcattttcttaataatcatgcataaactttaaacggttattatttagagacggagg 34120395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 242 - 293
Target Start/End: Complemental strand, 5272255 - 5272204
Alignment:
Q  242 ccttatttactgaatttcatccaatttagctactccactaactacaattaat 293  Q
    ||||||||| ||||||||||||||||||  ||||||||||||||||||||||    
T  5272255 ccttatttattgaatttcatccaatttaattactccactaactacaattaat 5272204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 244 - 379
Target Start/End: Complemental strand, 16377774 - 16377634
Alignment:
Q  244 ttatttactgaatttcatccaatttag----ctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaaca 339  Q
    ||||||| |||||||||||||| |||     |||||||||||||||||||||||| |   | ||| |||||||||| | ||||| | |||| ||||||||    
T  16377774 ttatttattgaatttcatccaacttaattaactactccactaactacaattaataaggttattttggtaaatgatattaattttaccattgtaatcaaca 16377675  T
Q  340 caattaat-attttgttaagaatcgtgtacaaaccttaaac 379  Q
    |||||||| ||||  |||| ||||||| ||||| |||||||    
T  16377674 caattaatcatttctttaataatcgtgcacaaatcttaaac 16377634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 244 - 346
Target Start/End: Complemental strand, 35242411 - 35242309
Alignment:
Q  244 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaat 343  Q
    ||||||| |||||||||||||| ||| |||||| |||||||||||||||||  |  | | ||||||||||| || |||||   ||| |||||||||||||    
T  35242411 ttatttattgaatttcatccaacttaactactcaactaactacaattaataaatatattctagtaaatgattctaattttaacattaaaatcaacacaat 35242312  T
Q  344 taa 346  Q
    |||    
T  35242311 taa 35242309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 243 - 389
Target Start/End: Complemental strand, 3323387 - 3323254
Alignment:
Q  243 cttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaa 342  Q
    |||| ||| |||||||||||||| ||| ||||||||||||||||||||||||              |||| |||| ||||| | ||||||||||||||||    
T  3323387 cttacttattgaatttcatccaacttaactactccactaactacaattaata--------------aatgttactaattttaccattgaaatcaacacaa 3323302  T
Q  343 ttaat-attttgttaagaatcgtgtacaaaccttaaacaactattatt 389  Q
    ||||| |||||  ||| ||||||| ||||||||||||| |||| ||||    
T  3323301 ttaatcatttttataataatcgtgcacaaaccttaaacgactaatatt 3323254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 242 - 347
Target Start/End: Complemental strand, 43699712 - 43699610
Alignment:
Q  242 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 341  Q
    |||| |||| ||||||| |||||| |||  |||||||||||    |||||||| ||| | |||| ||||||||||| ||||| |||||||||||||||||    
T  43699712 ccttgtttattgaattttatccaacttaattactccactaaa---aattaataggtgtattttaataaatgatactaattttactattgaaatcaacaca 43699616  T
Q  342 attaat 347  Q
     |||||    
T  43699615 gttaat 43699610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 244 - 294
Target Start/End: Complemental strand, 26863472 - 26863422
Alignment:
Q  244 ttatttactgaatttcatccaatttagctactccactaactacaattaata 294  Q
    ||||||| |||||||||||| | ||| ||||||||||||||||||||||||    
T  26863472 ttatttaatgaatttcatccgacttaactactccactaactacaattaata 26863422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 244 - 294
Target Start/End: Complemental strand, 39329777 - 39329728
Alignment:
Q  244 ttatttactgaatttcatccaatttagctactccactaactacaattaata 294  Q
    ||||||| |||||||||||||||||| |||||||| |||||||||||||||    
T  39329777 ttatttattgaatttcatccaatttaactactcca-taactacaattaata 39329728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 242 - 294
Target Start/End: Complemental strand, 9458382 - 9458330
Alignment:
Q  242 ccttatttactgaatttcatccaatttagctactccactaactacaattaata 294  Q
    ||||||||| | |||||||||||| ||  ||||||||||||||||||||||||    
T  9458382 ccttatttattaaatttcatccaactttactactccactaactacaattaata 9458330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 242 - 390
Target Start/End: Complemental strand, 18853317 - 18853167
Alignment:
Q  242 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcatt--ttgctattgaaatcaaca 339  Q
    ||||||||| |||||||||||||| |||  ||||| ||||||||||| ||||| | | | ||| |||||||||||  |||  ||   |||||||||||||    
T  18853317 ccttatttattgaatttcatccaaattaattactctactaactacaactaataagagtattttggtaaatgatac-aattaattatcattgaaatcaaca 18853219  T
Q  340 caattaa-tattttgttaagaatcgtgtacaaaccttaaacaactattattt 390  Q
    ||||||| |||||  ||||  |||||| |||||  |||||| ||||||||||    
T  18853218 caattaattatttccttaaagatcgtgcacaaattttaaacgactattattt 18853167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 369 - 408
Target Start/End: Complemental strand, 5272181 - 5272142
Alignment:
Q  369 aaaccttaaacaactattatttagagatggagggagtatt 408  Q
    ||||||||||| ||||||||||||||||| ||||||||||    
T  5272181 aaaccttaaacgactattatttagagatgaagggagtatt 5272142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 363 - 406
Target Start/End: Original strand, 30544402 - 30544445
Alignment:
Q  363 gtgtacaaaccttaaacaactattatttagagatggagggagta 406  Q
    ||||| ||||||||||| ||||||||||||||| ||||||||||    
T  30544402 gtgtaaaaaccttaaacgactattatttagagacggagggagta 30544445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 302 - 408
Target Start/End: Original strand, 32783421 - 32783527
Alignment:
Q  302 tttagtaaatgatactcattttgctattgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggag 400  Q
    |||||||||||||| | ||||| ||||  |||| |||||||||||| ||||| |||| || |||| |  |||||||||  | |||||||||||||||| |    
T  32783421 tttagtaaatgatattaattttactatcaaaataaacacaattaatcattttcttaataaccgtgcatcaaccttaaatgattattatttagagatgg-g 32783519  T
Q  401 ggagtatt 408  Q
    ||||||||    
T  32783520 ggagtatt 32783527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 242 - 380
Target Start/End: Original strand, 34225587 - 34225726
Alignment:
Q  242 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 341  Q
    ||||||||| | |||||||| ||| |||  ||||||| ||||||||||||||| | |   |||||||||| ||||| | ||| | ||| ||||||| | |    
T  34225587 ccttatttattaaatttcattcaacttaaatactccattaactacaattaataagggtgttttagtaaataatactaagtttaccattaaaatcaatata 34225686  T
Q  342 attaat-attttgttaagaatcgtgtacaaaccttaaaca 380  Q
    |||| | ||||  |||| ||||||| ||||||||||||||    
T  34225687 attattcatttccttaataatcgtgcacaaaccttaaaca 34225726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 244 - 294
Target Start/End: Original strand, 19937384 - 19937434
Alignment:
Q  244 ttatttactgaatttcatccaatttagctactccactaactacaattaata 294  Q
    ||||||| ||||||| || ||| ||| ||||||||||||||||||||||||    
T  19937384 ttatttattgaattttattcaacttaactactccactaactacaattaata 19937434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 244 - 294
Target Start/End: Complemental strand, 32831289 - 32831239
Alignment:
Q  244 ttatttactgaatttcatccaatttagctactccactaactacaattaata 294  Q
    ||||||| |||||||||||  ||||| |||||||| |||||||||||||||    
T  32831289 ttatttattgaatttcatctcatttaactactccaataactacaattaata 32831239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 325 - 406
Target Start/End: Original strand, 39443793 - 39443875
Alignment:
Q  325 ctattgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 406  Q
    ||||||||||||||| ||||||| ||||| |||| ||| ||| ||||||||||||| |||| ||||   ||||||| ||||||    
T  39443793 ctattgaaatcaacaaaattaatcattttcttaataattgtgcacaaaccttaaacgactaatattataagatggatggagta 39443875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 242 - 287
Target Start/End: Complemental strand, 7494954 - 7494909
Alignment:
Q  242 ccttatttactgaatttcatccaatttagctactccactaactaca 287  Q
    ||||||||| |||||||||||||| ||| ||||||| |||||||||    
T  7494954 ccttatttattgaatttcatccaacttaactactccgctaactaca 7494909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 242 - 294
Target Start/End: Complemental strand, 11742644 - 11742592
Alignment:
Q  242 ccttatttactgaatttcatccaatttagctactccactaactacaattaata 294  Q
    ||||||||| |||| |||||| || ||| |||||||| |||||||||||||||    
T  11742644 ccttatttattgaacttcatcaaacttaactactccattaactacaattaata 11742592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 62; Significance: 2e-26; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 246 - 406
Target Start/End: Complemental strand, 20467 - 20306
Alignment:
Q  246 atttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaatta 345  Q
    ||||| |||||||||||||| ||| ||||| |||||||| ||||||||| | | | |||| ||||||||||| ||||| | ||  |||||||||||||||    
T  20467 atttattgaatttcatccaacttaactacttcactaactgcaattaataagggtattttactaaatgatactaattttacaatcaaaatcaacacaatta 20368  T
Q  346 at-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 406  Q
    || ||||  |||| |||| || |||| |||||||  ||||||||||||||||||||||||||    
T  20367 atcatttaattaataatcttgcacaacccttaaagtactattatttagagatggagggagta 20306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0159 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0159
Description:

Target: scaffold0159; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 229 - 378
Target Start/End: Complemental strand, 34151 - 34000
Alignment:
Q  229 ttccactgttatacc-ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgcta 327  Q
    ||||||| ||||||| ||||||| |||||||||||||| ||| ||| | |||||||||||||||||| | |   |||||||||||  ||| ||||| |||    
T  34151 ttccactattataccattatttattgaatttcatccaacttaactatttcactaactacaattaataagggtgttttagtaaatgccactaattttacta 34052  T
Q  328 ttgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaa 378  Q
    ||||| |||| ||||||||| ||||  |||| ||||||| ||||||||||||    
T  34051 ttgaattcaatacaattaatcatttccttaataatcgtgcacaaaccttaaa 34000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0583 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0583
Description:

Target: scaffold0583; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 242 - 406
Target Start/End: Original strand, 2022 - 2187
Alignment:
Q  242 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 341  Q
    ||||||||| ||||||||||| ||| ||  || |||||||||||||||||||| |     |||||||||||||| | |||||   |||||||| ||||||    
T  2022 ccttatttattgaatttcatcgaatgtaattaatccactaactacaattaataaggatgttttagtaaatgatattaattttatcattgaaattaacaca 2121  T
Q  342 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 406  Q
    |||||| | ||  |||| ||||||| |  |||||||||| ||| ||||||||||| ||||||||||    
T  2122 attaatcacttccttaataatcgtgcatgaaccttaaacgacttttatttagagacggagggagta 2187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1809 (Bit Score: 44; Significance: 8e-16; HSPs: 1)
Name: scaffold1809
Description:

Target: scaffold1809; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 229 - 347
Target Start/End: Complemental strand, 816 - 697
Alignment:
Q  229 ttccactgttatacc-ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgcta 327  Q
    ||||||| ||||||| ||||||| ||||||||||||||||||   ||||||||||||||||| ||||   |   ||||||||||| || | ||||| | |    
T  816 ttccactattatacccttatttattgaatttcatccaatttaaacactccactaactacaatcaataaaggtgttttagtaaatgctattaattttacca 717  T
Q  328 ttgaaatcaacacaattaat 347  Q
    ||||||||||||||||||||    
T  716 ttgaaatcaacacaattaat 697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1391 (Bit Score: 44; Significance: 8e-16; HSPs: 1)
Name: scaffold1391
Description:

Target: scaffold1391; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 302 - 408
Target Start/End: Complemental strand, 1875 - 1768
Alignment:
Q  302 tttagtaaatgatactcattttgctattgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggag 400  Q
    |||||||||||||| | ||||  ||||  ||||||||||||||||| ||||| |||| ||||||| | |||| ||||| |||||||||||||| | ||||    
T  1875 tttagtaaatgatattaatttgactatcaaaatcaacacaattaattattttcttaataatcgtgcataaactttaaagaactattatttagaaacggag 1776  T
Q  401 ggagtatt 408  Q
    ||||||||    
T  1775 ggagtatt 1768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 242 - 407
Target Start/End: Original strand, 16095 - 16261
Alignment:
Q  242 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 341  Q
    ||||||||| |||||||||||||  ||| || || || ||||||||||||||| |||   ||||||||||| || | |||||   ||| |||||||||||    
T  16095 ccttatttattgaatttcatccatcttaactgcttcattaactacaattaataagtgtgttttagtaaatgctattaattttatcattaaaatcaacaca 16194  T
Q  342 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtat 407  Q
    |||||| ||||  |||| ||||||| ||||| ||||||| |||| ||||  |||| |||||| ||||    
T  16195 attaatcatttccttaataatcgtgaacaaatcttaaactactaatattgtgagacggagggggtat 16261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 242 - 408
Target Start/End: Original strand, 50201 - 50368
Alignment:
Q  242 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 341  Q
    ||||||||| | |||||||| ||| |||  |||||||||||||  ||||||||     | | |||||||||||||| |||||   |||||||| ||||||    
T  50201 ccttatttatttaatttcattcaacttaattactccactaactgtaattaataaagatattatagtaaatgatactaattttatcattgaaattaacaca 50300  T
Q  342 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagtatt 408  Q
    |||||| ||||  |||| ||||||| ||||||||||||| |||| ||||  |||| ||| ||||||||    
T  50301 attaatcatttccttaataatcgtgcacaaaccttaaacgactaatattgtgagacggatggagtatt 50368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 242 - 402
Target Start/End: Complemental strand, 8099 - 7938
Alignment:
Q  242 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 341  Q
    ||||||||| |||| ||||||||| |||  ||||||||||||||||||||||| | |   ||| |||||| ||| | ||||| | ||  ||||||||| |    
T  8099 ccttatttattgaacttcatccaacttaattactccactaactacaattaataagggtgttttggtaaataatattaattttaccatccaaatcaacaaa 8000  T
Q  342 attaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggaggg 402  Q
    |||||| ||||  |||| || |||| |  |||| ||||| ||||||||||||||| ||||||    
T  7999 attaatcatttccttaataaccgtgcatcaaccgtaaacgactattatttagagacggaggg 7938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 307 - 406
Target Start/End: Original strand, 17097 - 17197
Alignment:
Q  307 taaatgatactcattttgctattgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagt 405  Q
    |||||| |||| ||||| | ||||||||||||||||||||| ||||| |||| |||| || ||||||||||||| |||| ||||   ||||||| |||||    
T  17097 taaatgctactaattttaccattgaaatcaacacaattaatcattttcttaataatcatgcacaaaccttaaacgactaatattgttagatggatggagt 17196  T
Q  406 a 406  Q
    |    
T  17197 a 17197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 244 - 406
Target Start/End: Complemental strand, 136153 - 135990
Alignment:
Q  244 ttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacacaat 343  Q
    ||||||| | ||||||||| || ||| ||||| ||||||||| |||||||| | |   ||||||||||| || | ||||| | |||||||||||||  ||    
T  136153 ttatttatttaatttcatcaaacttaactacttcactaactataattaataagggtgttttagtaaatgctattaattttaccattgaaatcaacattat 136054  T
Q  344 taat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 406  Q
    |||| ||||  |||| ||||||| | ||| ||||||| |||| ||||  |||| ||||||||||    
T  136053 taatcatttatttaataatcgtgcataaatcttaaacgactaatattgtgagacggagggagta 135990  T

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Target: scaffold0012 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 242 - 347
Target Start/End: Original strand, 105681 - 105786
Alignment:
Q  242 ccttatttactgaatttcatccaatttagctactccactaactacaattaatatgtggactttagtaaatgatactcattttgctattgaaatcaacaca 341  Q
    |||||||||  ||||||||| ||| ||| ||||| |||||||||||||||||| | |   ||||||||| | || | ||||| | |||||||| ||||||    
T  105681 ccttatttatcgaatttcattcaacttaactacttcactaactacaattaataagggtgttttagtaaacgctattaattttaccattgaaataaacaca 105780  T
Q  342 attaat 347  Q
    ||||||    
T  105781 attaat 105786  T

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Target: scaffold0011 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 232 - 294
Target Start/End: Complemental strand, 14297 - 14234
Alignment:
Q  232 cactgttatacctt-atttactgaatttcatccaatttagctactccactaactacaattaata 294  Q
    |||| ||||||||| ||||| ||||||||||| |||||| |||||||| |||||| ||||||||    
T  14297 cactattatacctttatttattgaatttcatcaaatttaactactccattaactataattaata 14234  T

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Target: scaffold0470 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0470
Description:

Target: scaffold0470; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 327 - 406
Target Start/End: Original strand, 1067 - 1147
Alignment:
Q  327 attgaaatcaacacaattaat-attttgttaagaatcgtgtacaaaccttaaacaactattatttagagatggagggagta 406  Q
    ||||||||||||| ||||||| ||||| |||| ||||||||  ||| ||||||| |||| ||||   ||||||||||||||    
T  1067 attgaaatcaacataattaatcatttttttaataatcgtgtgtaaatcttaaacgactaatattgtaagatggagggagta 1147  T

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