View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF16123_high_12 (Length: 507)
Name: NF16123_high_12
Description: NF16123
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16123_high_12 |
 |  |
|
| [»] scaffold0070 (3 HSPs) |
 |  |  |
|
| [»] scaffold1415 (1 HSPs) |
 |  |  |
|
| [»] scaffold0830 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr8 (Bit Score: 454; Significance: 0; HSPs: 19)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 454; E-Value: 0
Query Start/End: Original strand, 10 - 487
Target Start/End: Original strand, 22898676 - 22899153
Alignment:
| Q |
10 |
acatcatcataatcacactccgtatgcattttcaggttcaataccaaaggagattggctatcttgataaacttgaaattcttatattagcagaaaatagc |
109 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22898676 |
acatcatcataatcacactccttatgcattttcaggttcgataccaaaggagattggctatcttgataaacttgaaattcttatattagcagaaaatagc |
22898775 |
T |
 |
| Q |
110 |
ttcagtggatctattccttccaacctcatgaacatgtcatcattgaaacaattggagtttgagcaaaattacctctcaggaattattccatcaaaaacag |
209 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22898776 |
ttcagtggatctattccttccaacctcatgaacatgtcatcattgaaacaattggagtttgagcaaaattacctctcaggaattattccatcaaaaacag |
22898875 |
T |
 |
| Q |
210 |
gatataaccttcctagcctacaatatctacacttgaataacaacaattttgttggaaatattccaaatagcatattcaattcttctaatctcattggatt |
309 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22898876 |
gatataaccttcctaacctacaatatctacacttgaataacaacaattttgttggaaatattccaaatagcatattcaattcttctaatctcattggatt |
22898975 |
T |
 |
| Q |
310 |
tcaattgcattccaatgcatttagtggaactctacccaatattgcttttggaggtttaaggttcctcaaaacaattttcatacagaacaacaacttgata |
409 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
22898976 |
tcaattgcattccaatgcatttagtggaactctacccaatattgcttttggaggtttaaggttcctcaaaacaattttcatacaggacaacaacttgata |
22899075 |
T |
 |
| Q |
410 |
atagaagattctcttcagttctttacttccttgacaaattgtagatatttaaatattcttgacttatcaggaaatcat |
487 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
22899076 |
atagaagattctcttcagttctttacttccttgacgaattgtagatatttaaatattctagacttatcaggaaatcat |
22899153 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 57 - 487
Target Start/End: Original strand, 24872473 - 24872903
Alignment:
| Q |
57 |
aggagattggctatcttgataaacttgaaattcttatattagcagaaaatagcttcagtggatctattccttccaacctcatgaacatgtcatcattgaa |
156 |
Q |
| |
|
|||||||||||||||||||||||||||| || |||| ||| | |||||||| | ||||||||| |||||||| || | |||||||||||| ||| |
|
|
| T |
24872473 |
aggagattggctatcttgataaacttgagcagctactattggcaaacaatagctttactggatctataccttccaaaatcttcaacatgtcatcactgat |
24872572 |
T |
 |
| Q |
157 |
acaattggagtttgagcaaaattacctctcaggaattattccatcaaaaacaggatataaccttcctagcctacaatatctacacttgaataacaacaat |
256 |
Q |
| |
|
| ||| | |||| |||||| ||||||| || || ||||||||||| || |||||||||||||||||| | || |||||||| ||| || | |||||| |
|
|
| T |
24872573 |
aggcttgtatcttgaacaaaatcacctctccgggataattccatcaaatacgggatataaccttcctagcttgcagtatctacaattggatcataacaat |
24872672 |
T |
 |
| Q |
257 |
tttgttggaaatattccaaatagcatattcaattcttctaatctcattggatttcaattgcattccaatgcatttagtggaactctacccaatattgctt |
356 |
Q |
| |
|
||||||||||||||||||||||| |||||||| ||||||||||| |||| |||||||||| | ||||||||| ||||||||||||||||||||||||| |
|
|
| T |
24872673 |
tttgttggaaatattccaaatagtatattcaactcttctaatcttattgtatttcaattgagtgacaatgcattcagtggaactctacccaatattgctt |
24872772 |
T |
 |
| Q |
357 |
ttggaggtttaaggttcctcaaaacaattttcatacagaacaacaacttgataatagaagattctcttcagttctttacttccttgacaaattgtagata |
456 |
Q |
| |
|
|||||| ||||||| |||||||| || ||| || | | |||||| |||| |||||||||||||| ||| ||||||||||||||||| ||||||||||| |
|
|
| T |
24872773 |
ttggagatttaaggctcctcaaatcattttacacatatggcaacaatttgacaatagaagattctcatcaattctttacttccttgacgaattgtagata |
24872872 |
T |
 |
| Q |
457 |
ttt-aaatattcttgacttatcaggaaatcat |
487 |
Q |
| |
|
||| ||||| ||||||||||||||| |||||| |
|
|
| T |
24872873 |
tttgaaata-tcttgacttatcagggaatcat |
24872903 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 36 - 487
Target Start/End: Complemental strand, 25717358 - 25716907
Alignment:
| Q |
36 |
cattttcaggttcaataccaaaggagattggctatcttgataaacttgaaattcttatattagcagaa-aatagcttcagtggatctattccttccaacc |
134 |
Q |
| |
|
||||||||||| | || || |||||||||||||||||||||||||||| | ||||| | | | || |||||||| |||||||||||||||||||| |
|
|
| T |
25717358 |
cattttcaggtacgattcccgaggagattggctatcttgataaacttgaggtg-ttatacttgtataacaatagcttaagtggatctattccttccaaaa |
25717260 |
T |
 |
| Q |
135 |
tcatgaacatgtcatcattgaaacaattggagtttgagcaaaattacctctcaggaattattccatcaaaaacaggatataaccttcctagcctacaata |
234 |
Q |
| |
|
|| | ||| |||||||| | | || |||| | |||| || ||| ||||||||| | |||||||||| || ||||||| |||||||| ||| ||||| |
|
|
| T |
25717259 |
tcttcaacttgtcatcactcactcatttgggggttgatcagaatagcctctcaggcacacttccatcaaatacgggatatagccttcctaacctgcaata |
25717160 |
T |
 |
| Q |
235 |
tctacacttgaataacaacaattttgttggaaatattccaaatagcatattcaattcttctaatctcattggatttcaattgcattccaatgcatttagt |
334 |
Q |
| |
|
|||| |||||||| | |||||||||||||||||||||||||||| ||||||||| ||||||||||| ||| |||||||||||| ||||||||| ||| |
|
|
| T |
25717159 |
tctatacttgaatcataacaattttgttggaaatattccaaataacatattcaactcttctaatcttattatttttcaattgcatgacaatgcattcagt |
25717060 |
T |
 |
| Q |
335 |
ggaactctacccaatattgcttttggaggtttaaggttcctcaaaacaattttcatacagaacaacaacttgataatagaagattctcttcagttcttta |
434 |
Q |
| |
|
|||||||||||||||||||||||||||| |||| | || || || | || |||| | |||||||| |||| |||||||||||||| ||| ||||||| |
|
|
| T |
25717059 |
ggaactctacccaatattgcttttggagatttaggattgcttgaatcgtttcgcatatataacaacaatttgacaatagaagattctcatcaattcttta |
25716960 |
T |
 |
| Q |
435 |
cttccttgacaaattgtagatatttaaatattcttgacttatcaggaaatcat |
487 |
Q |
| |
|
||||||||||||||||||||||||| || ||| ||||||||||| |||||| |
|
|
| T |
25716959 |
cttccttgacaaattgtagatatttgaagtatctagacttatcagggaatcat |
25716907 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 56 - 459
Target Start/End: Complemental strand, 25393437 - 25393034
Alignment:
| Q |
56 |
aaggagattggctatcttgataaacttgaaattcttatattagcagaa-aatagcttcagtggatctattccttccaacctcatgaacatgtcatcattg |
154 |
Q |
| |
|
|||||||||||||||||||||||| |||| | ||||| | || || |||||||| |||||||||||| ||||||| || | ||| |||||||| | |
|
|
| T |
25393437 |
aaggagattggctatcttgataaatttgaggtg-ttatacttgcctaacaatagcttaagtggatctatttcttccaaaatcttcaacttgtcatcactc |
25393339 |
T |
 |
| Q |
155 |
aaacaattggagtttgagcaaaattacctctcaggaattattccatcaaaaacaggatataaccttcctagcctacaatatctacacttgaataacaaca |
254 |
Q |
| |
|
| | |||||| |||| | ||| ||||||||| | ||||||||||| || ||||||| ||||||||| || ||||||||| |||||||| | |||| |
|
|
| T |
25393338 |
actgatttggaggttgatctgaatagcctctcaggcacaattccatcaaatacgggatatagccttcctagtctgcaatatctatacttgaatgataaca |
25393239 |
T |
 |
| Q |
255 |
attttgttggaaatattccaaatagcatattcaattcttctaatctcattggatttcaattgcattccaatgcatttagtggaactctacccaatattgc |
354 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||| ||||||||||| |||| |||||||||| || ||||||||| ||||||||||||||||||| ||| |
|
|
| T |
25393238 |
attttgttggaaatattccaaataacatattcaactcttctaatcttattgaatttcaattggatgacaatgcattcagtggaactctacccaatactgc |
25393139 |
T |
 |
| Q |
355 |
ttttggaggtttaaggttcctcaaaacaattttcatacagaacaacaacttgataatagaagattctcttcagttctttacttccttgacaaattgtaga |
454 |
Q |
| |
|
|||||||| |||||| ||||| || | | |||||| | ||||||| |||| ||| |||||||||| ||| ||||||||||||||||||||||||||| |
|
|
| T |
25393138 |
ttttggagatttaagattccttgaatcgctattcatatatgacaacaatttgacaattgaagattctcatcaattctttacttccttgacaaattgtaga |
25393039 |
T |
 |
| Q |
455 |
tattt |
459 |
Q |
| |
|
||||| |
|
|
| T |
25393038 |
tattt |
25393034 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 104 - 487
Target Start/End: Complemental strand, 25324753 - 25324370
Alignment:
| Q |
104 |
aatagcttcagtggatctattccttccaacctcatgaacatgtcatcattgaaacaattggagtttgagcaaaattacctctcaggaattattccatcaa |
203 |
Q |
| |
|
|||||||| |||||||||||||||||||| || | |||||||||||| | | | | ||| | ||| |||||| ||||||| || || ||||| |||| |
|
|
| T |
25324753 |
aatagcttaagtggatctattccttccaaaatcttcaacatgtcatcacttacatatttgtatcctgaccaaaatcacctctctgggataattccttcaa |
25324654 |
T |
 |
| Q |
204 |
aaacaggatataaccttcctagcctacaatatctacacttgaataacaacaattttgttggaaatattccaaatagcatattcaattcttctaatctcat |
303 |
Q |
| |
|
| || ||||||| |||||||| ||| ||||||||| ||||||| | |||||||||||||||||||||||||||| ||||||||| | ||||||||| || |
|
|
| T |
25324653 |
atacgggatatagccttcctaacctgcaatatctattcttgaatgataacaattttgttggaaatattccaaataacatattcaactgttctaatcttat |
25324554 |
T |
 |
| Q |
304 |
tggatttcaattgcattccaatgcatttagtggaactctacccaatattgcttttggaggtttaaggttcctcaaaacaattttcatacagaacaacaac |
403 |
Q |
| |
|
| |||||||||| || ||||||||| | ||||||||||||||||| ||||||||||| |||| | || || ||| | || ||||| | ||||||| |
|
|
| T |
25324553 |
tcaatttcaattgaatggcaatgcattcactggaactctacccaatactgcttttggagatttaggattgcttaaatcgtttctcatagatgacaacaat |
25324454 |
T |
 |
| Q |
404 |
ttgataatagaagattctcttcagttctttacttccttgacaaattgtagatattt-aaatattcttgacttatcaggaaatcat |
487 |
Q |
| |
|
|||| |||||||||||||| ||| |||||||||||||||||||||||||||||||| ||||| ||| |||||||| || |||||| |
|
|
| T |
25324453 |
ttgacaatagaagattctcatcaattctttacttccttgacaaattgtagatatttgaaata-tctagacttatccgggaatcat |
25324370 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 104 - 487
Target Start/End: Complemental strand, 25807346 - 25806963
Alignment:
| Q |
104 |
aatagcttcagtggatctattccttccaacctcatgaacatgtcatcattgaaacaattggagtttgagcaaaattacctctcaggaattattccatcaa |
203 |
Q |
| |
|
|||||||| |||||||||||||||||||| || | ||| |||||||| | | ||| |||||| |||| | ||| ||||||||| | |||||||||| |
|
|
| T |
25807346 |
aatagcttaagtggatctattccttccaaaatcttcaacttgtcatcactcacacatttggaggttgaaaataatagcctctcaggcacaattccatcaa |
25807247 |
T |
 |
| Q |
204 |
aaacaggatataaccttcctagcctacaatatctacacttgaataacaacaattttgttggaaatattccaaatagcatattcaattcttctaatctcat |
303 |
Q |
| |
|
| || ||||||| ||||||||| || |||||||||||||||||| | |||||||||||||||||||||||||||| ||||||||| ||||||||||| || |
|
|
| T |
25807246 |
atacgggatatagccttcctagtctgcaatatctacacttgaatgataacaattttgttggaaatattccaaataacatattcaactcttctaatcttat |
25807147 |
T |
 |
| Q |
304 |
tggatttcaattgcattccaatgcatttagtggaactctacccaatattgcttttggaggtttaaggttcctcaaaacaattttcatacagaacaacaac |
403 |
Q |
| |
|
|| ||||||||| || ||| ||||| |||||||||||||||| ||||||||||||| |||| | ||| | || || ||||| | ||||||| |
|
|
| T |
25807146 |
tgtttttcaattgtatgacaacgcattcagtggaactctacccattattgcttttggaaatttaggattcgttgaattctttctcatatatgacaacaat |
25807047 |
T |
 |
| Q |
404 |
ttgataatagaagattctcttcagttctttacttccttgacaaattgtagatatttaaatattcttgacttatcaggaaatcat |
487 |
Q |
| |
|
|||| |||| | ||||||| ||| |||||||||||||||||||||||||||||||| || ||| ||||||||||| |||||| |
|
|
| T |
25807046 |
ttgacaatatatgattctcatcaattctttacttccttgacaaattgtagatatttgaagtatctagacttatcagggaatcat |
25806963 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 36 - 459
Target Start/End: Complemental strand, 25455147 - 25454724
Alignment:
| Q |
36 |
cattttcaggttcaataccaaaggagattggctatcttgataaacttgaaattcttatattagcagaaaatagcttcagtggatctattccttccaacct |
135 |
Q |
| |
|
||||||||||| | || || |||||||||||||||||||||||||||| | || | || | ||| ||||| || |||||||||||||||||||| | |
|
|
| T |
25455147 |
cattttcaggtacgattcccgaggagattggctatcttgataaacttgagctgctagttttgggagacaataggttaagtggatctattccttccaaaat |
25455048 |
T |
 |
| Q |
136 |
catgaacatgtcatcattgaaacaattggagtttgagcaaaattacctctcaggaattattccatcaaaaacaggatataaccttcctagcctacaatat |
235 |
Q |
| |
|
| | ||| |||||||| | | |||| | |||| | ||| ||||||||| | ||||||||||| || ||||||| ||||||||| || |||||| |
|
|
| T |
25455047 |
cttcaacttgtcatcactcactgctttggtggttgaaaataatagcctctcaggcacaattccatcaaatacgggatatagccttcctagtctgcaatat |
25454948 |
T |
 |
| Q |
236 |
ctacacttgaataacaacaattttgttggaaatattccaaatagcatattcaattcttctaatctcattggatttcaattgcattccaatgcatttagtg |
335 |
Q |
| |
|
||| ||||||| | |||||||||||||||||||||| ||||| ||||||||| |||||||| || |||| ||||||||||||||| |||| ||| |||| |
|
|
| T |
25454947 |
ctattcttgaatgataacaattttgttggaaatattctaaataacatattcaactcttctaagcttattgtatttcaattgcattcgaatgtattcagtg |
25454848 |
T |
 |
| Q |
336 |
gaactctacccaatattgcttttggaggtttaaggttcctcaaaacaattttcatacagaacaacaacttgataatagaagattctcttcagttctttac |
435 |
Q |
| |
|
||||||||||||||| |||||||| || |||| | || || || | ||| |||| |||||||| |||| |||||||||||||| ||| |||||||| |
|
|
| T |
25454847 |
gaactctacccaatactgcttttgaagatttaggattgcttgaatcgattcgcatatctaacaacaatttgacaatagaagattctcatcaattctttac |
25454748 |
T |
 |
| Q |
436 |
ttccttgacaaattgtagatattt |
459 |
Q |
| |
|
|||||||||||||||||||||||| |
|
|
| T |
25454747 |
ttccttgacaaattgtagatattt |
25454724 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 195 - 487
Target Start/End: Complemental strand, 25606643 - 25606351
Alignment:
| Q |
195 |
ttccatcaaaaacaggatataaccttcctagcctacaatatctacacttgaataacaacaattttgttggaaatattccaaatagcatattcaattcttc |
294 |
Q |
| |
|
|||||||||| || ||||||| ||||||||| | ||||||||| |||||||| | |||||||||||||||||||||||||||| ||||||||| ||||| |
|
|
| T |
25606643 |
ttccatcaaatacgggatatagccttcctagtttgcaatatctatacttgaatgaaaacaattttgttggaaatattccaaataacatattcaactcttc |
25606544 |
T |
 |
| Q |
295 |
taatctcattggatttcaattgcattccaatgcatttagtggaactctacccaatattgcttttggaggtttaaggttcctcaaaacaattttcatacag |
394 |
Q |
| |
|
|||||| |||| ||||||||| || ||| ||||| |||||||||||||||||||||||||||||| |||||| ||||| || || ||||| | |
|
|
| T |
25606543 |
taatctgattgattttcaattgtatgacaacgcattcagtggaactctacccaatattgcttttggaaatttaagattccttgaattctttctcatatat |
25606444 |
T |
 |
| Q |
395 |
aacaacaacttgataatagaagattctcttcagttctttacttccttgacaaattgtagatatttaaatattcttgacttatcaggaaatcat |
487 |
Q |
| |
|
||||||| |||| |||||| ||||||| ||| |||||||||||||||||||||||||||||||| || ||| ||||||||||| |||||| |
|
|
| T |
25606443 |
gacaacaatttgacaatagatgattctcatcaattctttacttccttgacaaattgtagatatttgaagtatctagacttatcaggtaatcat |
25606351 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 104 - 487
Target Start/End: Complemental strand, 25653401 - 25653018
Alignment:
| Q |
104 |
aatagcttcagtggatctattccttccaacctcatgaacatgtcatcattgaaacaattggagtttgagcaaaattacctctcaggaattattccatcaa |
203 |
Q |
| |
|
|||||||| |||||||||||||||||||| || | |||||||||||| | | | || ||| |||| || ||| ||||||||| | |||||||||| |
|
|
| T |
25653401 |
aatagcttaagtggatctattccttccaaaatcttcaacatgtcatcactcattgatttcgaggttgatcagaatagcctctcaggcacaattccatcaa |
25653302 |
T |
 |
| Q |
204 |
aaacaggatataaccttcctagcctacaatatctacacttgaataacaacaattttgttggaaatattccaaatagcatattcaattcttctaatctcat |
303 |
Q |
| |
|
| || ||||||| |||||||| || |||||| ||| ||||||| | |||||||||||||||||||||||||||| |||||||| ||||||||||| || |
|
|
| T |
25653301 |
atacgggatatagccttcctaatctgcaatatttactcttgaatgataacaattttgttggaaatattccaaataatatattcaactcttctaatcttat |
25653202 |
T |
 |
| Q |
304 |
tggatttcaattgcattccaatgcatttagtggaactctacccaatattgcttttggaggtttaaggttcctcaaaacaattttcatacagaacaacaac |
403 |
Q |
| |
|
|| ||||||||| | ||||||||| |||||||||||||||| |||| ||||| ||| |||| | ||||| || || ||||| | ||||||| |
|
|
| T |
25653201 |
tgagtttcaattgaaagacaatgcattcagtggaactctacccagtatttcttttagagatttaggattccttgaatactttctcatagatgacaacaat |
25653102 |
T |
 |
| Q |
404 |
ttgataatagaagattctcttcagttctttacttccttgacaaattgtagatattt-aaatattcttgacttatcaggaaatcat |
487 |
Q |
| |
|
|||| |||||||||||||| ||| ||||||||||| |||||||||||||||||||| | ||| ||||||||||||||| |||||| |
|
|
| T |
25653101 |
ttgacaatagaagattctcatcaattctttacttcattgacaaattgtagatatttgacata-tcttgacttatcaggtaatcat |
25653018 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 36 - 459
Target Start/End: Complemental strand, 25343145 - 25342722
Alignment:
| Q |
36 |
cattttcaggttcaataccaaaggagattggctatcttgataaacttgaaattcttatattagcagaaaatagcttcagtggatctattccttccaacct |
135 |
Q |
| |
|
||||||||||| | || || |||||||||||||||||||||||||||| || | || | | |||||||| |||||||||||||||||||| | |
|
|
| T |
25343145 |
cattttcaggtacgattcccgaggagattggctatcttgataaacttgagcgactattcttgtctaacaatagcttaagtggatctattccttccaaaat |
25343046 |
T |
 |
| Q |
136 |
catgaacatgtcatcattgaaacaattggagtttgagcaaaattacctctcaggaattattccatcaaaaacaggatataaccttcctagcctacaatat |
235 |
Q |
| |
|
| | ||| |||||||| | | | |||||| |||| | ||| ||||||||| | ||||||||||| || ||||||| |||||||||||| ||| || |
|
|
| T |
25343045 |
cttcaacttgtcatcactcacttatttggaggttgaagagaatagcctctcaggcacaattccatcaaatacgggatatagccttcctagcctgcaacat |
25342946 |
T |
 |
| Q |
236 |
ctacacttgaataacaacaattttgttggaaatattccaaatagcatattcaattcttctaatctcattggatttcaattgcattccaatgcatttagtg |
335 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||||||| ||||||||| ||||||||||| ||| ||||||||| | ||| | ||| |||| |
|
|
| T |
25342945 |
ctacacttgaataataacaattttgttggaaatattccaaataacatattcaactcttctaatcttattcattttcaattgactgacaacgaattcagtg |
25342846 |
T |
 |
| Q |
336 |
gaactctacccaatattgcttttggaggtttaaggttcctcaaaacaattttcatacagaacaacaacttgataatagaagattctcttcagttctttac |
435 |
Q |
| |
|
||||| ||||||||| ||||||||||| |||| | || || || | || |||| | | |||||| |||| ||| |||||||||| ||| |||||||| |
|
|
| T |
25342845 |
gaactttacccaatactgcttttggagatttaggattgcttgaatcgtttaacatagataccaacaatttgacaattgaagattctcatcaattctttac |
25342746 |
T |
 |
| Q |
436 |
ttccttgacaaattgtagatattt |
459 |
Q |
| |
|
|||||||||||||||||||||||| |
|
|
| T |
25342745 |
ttccttgacaaattgtagatattt |
25342722 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 57 - 459
Target Start/End: Complemental strand, 23260339 - 23259937
Alignment:
| Q |
57 |
aggagattggctatcttgataaacttgaaattcttatattagcagaaaatagcttcagtggatctattccttccaacctcatgaacatgtcatcattgaa |
156 |
Q |
| |
|
|||||||||| |||||||||||||||||| |||| || || | | | |||||||| |||||||| |||||||| || ||| | |||||||||||| ||| |
|
|
| T |
23260339 |
aggagattggttatcttgataaacttgaatttctaatcttggaaaacaatagcttgagtggatccattccttctaaactcctcaacatgtcatcactgac |
23260240 |
T |
 |
| Q |
157 |
acaattggagt-ttgagcaaaattacctctcaggaattattccatcaaaaacaggatataaccttcctagcctacaatatctacacttgaataacaacaa |
255 |
Q |
| |
|
| ||| ||| ||| | ||||||||||||||| || ||||| || || | |||||||||||||||| || ||||| |||||||||||| | |||| |
|
|
| T |
23260239 |
attcttg-agtcttgccctaaattacctctcaggcatgattccgtcgaataatggatataaccttcctatgctgcaatacctacacttgaatcataacag |
23260141 |
T |
 |
| Q |
256 |
ttttgttggaaatattccaaatagcatattcaattcttctaatctcattggatttcaattgcattccaatgcatttagtggaactctacccaatattgct |
355 |
Q |
| |
|
||||||||| ||| |||||||||| |||||||| ||||| |||||||||| |||||||||| | ||| |||| || |||||||| |||||||||||| |
|
|
| T |
23260140 |
ttttgttggcaatgttccaaatagtatattcaactcttccaatctcattgaatttcaattgagtgacaacacattcagcggaactctgcccaatattgct |
23260041 |
T |
 |
| Q |
356 |
tttggaggtttaaggttcctcaaaacaattttcatacagaacaacaacttgataatagaagattctcttcagttctttacttccttgacaaattgtagat |
455 |
Q |
| |
|
|| |||| |||||||||||||| |||| || ||||| | ||||| | || | |||||| ||||||||||| ||||||||||| ||| |||||| ||| |
|
|
| T |
23260040 |
ttcggagatttaaggttcctcagaacacttatcataaataacaatgattttacaatagatgattctcttcaattctttacttctttgggaaattgcagac |
23259941 |
T |
 |
| Q |
456 |
attt |
459 |
Q |
| |
|
|||| |
|
|
| T |
23259940 |
attt |
23259937 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 230 - 487
Target Start/End: Complemental strand, 25571857 - 25571600
Alignment:
| Q |
230 |
caatatctacacttgaataacaacaattttgttggaaatattccaaatagcatattcaattcttctaatctcattggatttcaattgcattccaatgcat |
329 |
Q |
| |
|
||||||||||||||| || | ||||||||||||||||||||||||| ||| |||||||| ||||||||||| ||| |||||||||| | |||||||| |
|
|
| T |
25571857 |
caatatctacacttggatcataacaattttgttggaaatattccaagtagtatattcaactcttctaatcttattcaatttcaattgagtgtcaatgcat |
25571758 |
T |
 |
| Q |
330 |
ttagtggaactctacccaatattgcttttggaggtttaaggttcctcaaaacaattttcatacagaacaacaacttgataatagaagattctcttcagtt |
429 |
Q |
| |
|
| |||||||||||||||||||||| |||||||| |||| || || || || |||| | |||||||| |||| ||| |||||||||| ||| || |
|
|
| T |
25571757 |
tcagtggaactctacccaatattgattttggagatttagtattgcttgaattgtttcacatatataacaacaatttgacaatcgaagattctcatcaatt |
25571658 |
T |
 |
| Q |
430 |
ctttacttccttgacaaattgtagatattt-aaatattcttgacttatcaggaaatcat |
487 |
Q |
| |
|
|||||||||||||||||||||||| |||| ||||| ||| ||||||||||| |||||| |
|
|
| T |
25571657 |
ctttacttccttgacaaattgtaggcatttgaaata-tctagacttatcagggaatcat |
25571600 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 36 - 294
Target Start/End: Complemental strand, 25697525 - 25697267
Alignment:
| Q |
36 |
cattttcaggttcaataccaaaggagattggctatcttgataaacttgaaattcttatattagcagaaaatagcttcagtggatctattccttccaacct |
135 |
Q |
| |
|
||||||||||| | || || ||||||||||| ||||||||||||||||| | || ||| | | |||||||| |||||||||||||||||||| | |
|
|
| T |
25697525 |
cattttcaggtacgattcccaaggagattggttatcttgataaacttgaggtgctatcattgtctaacaatagcttaagtggatctattccttccaaaat |
25697426 |
T |
 |
| Q |
136 |
catgaacatgtcatcattgaaacaattggagtttgagcaaaattacctctcaggaattattccatcaaaaacaggatataaccttcctagcctacaatat |
235 |
Q |
| |
|
| | ||| |||||||| | | | | |||||| |||| | ||| ||||||| | | ||||||||||| || ||||||| |||||||| ||| |||||| |
|
|
| T |
25697425 |
cttcaacttgtcatcactcacatatttggaggttgatcgtaatagcctctcaagcacaattccatcaaatacgggatatagccttcctaacctgcaatat |
25697326 |
T |
 |
| Q |
236 |
ctacacttgaataacaacaattttgttggaaatattccaaatagcatattcaattcttc |
294 |
Q |
| |
|
||||||||| || | |||||||||||||||||||||||||||| |||||||| ||||| |
|
|
| T |
25697325 |
ctacacttgtatcaaaacaattttgttggaaatattccaaataatatattcaactcttc |
25697267 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 116 - 304
Target Start/End: Complemental strand, 25477758 - 25477570
Alignment:
| Q |
116 |
ggatctattccttccaacctcatgaacatgtcatcattgaaacaattggagtttgagcaaaattacctctcaggaattattccatcaaaaacaggatata |
215 |
Q |
| |
|
||||| ||||||||||| ||| | ||||| |||||| ||| | | ||| | |||| ||||||||||||||||| || ||||||||||||||||| |||| |
|
|
| T |
25477758 |
ggatcaattccttccaaactcctcaacatatcatcactgacatacttgcatcttgaacaaaattacctctcaggcataattccatcaaaaacaggttata |
25477659 |
T |
 |
| Q |
216 |
accttcctagcctacaatatctacacttgaataacaacaattttgttggaaatattccaaatagcatattcaattcttctaatctcatt |
304 |
Q |
| |
|
|||||||| |||||| | || ||| || | |||||||||||||||||||||||||||| |||||||| ||||| |||||||| |
|
|
| T |
25477658 |
gccttcctaagctacaacaactttcgttgtatcaaaacaattttgttggaaatattccaaatattatattcaacgcttctgatctcatt |
25477570 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 396 - 459
Target Start/End: Complemental strand, 25697168 - 25697105
Alignment:
| Q |
396 |
acaacaacttgataatagaagattctcttcagttctttacttccttgacaaattgtagatattt |
459 |
Q |
| |
|
||||||| |||| |||||||||||||| ||| |||||||||||||||||||||||||||||||| |
|
|
| T |
25697168 |
acaacaatttgacaatagaagattctcatcaattctttacttccttgacaaattgtagatattt |
25697105 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 428 - 487
Target Start/End: Complemental strand, 25312772 - 25312713
Alignment:
| Q |
428 |
ttctttacttccttgacaaattgtagatatttaaatattcttgacttatcaggaaatcat |
487 |
Q |
| |
|
|||||||||||||||||||||||||||||||| || ||| ||||||||||| |||||| |
|
|
| T |
25312772 |
ttctttacttccttgacaaattgtagatatttgaagtatctagacttatcaggtaatcat |
25312713 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 36 - 84
Target Start/End: Complemental strand, 25324823 - 25324775
Alignment:
| Q |
36 |
cattttcaggttcaataccaaaggagattggctatcttgataaacttga |
84 |
Q |
| |
|
||||||||||| | || || |||||||||||||||||||||||||||| |
|
|
| T |
25324823 |
cattttcaggtacgattcccgaggagattggctatcttgataaacttga |
25324775 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 36 - 84
Target Start/End: Complemental strand, 25606802 - 25606754
Alignment:
| Q |
36 |
cattttcaggttcaataccaaaggagattggctatcttgataaacttga |
84 |
Q |
| |
|
||||||||||| | || || ||||||||||| ||||||||||||||||| |
|
|
| T |
25606802 |
cattttcaggtacgattcccaaggagattggttatcttgataaacttga |
25606754 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 36 - 84
Target Start/End: Complemental strand, 25653469 - 25653421
Alignment:
| Q |
36 |
cattttcaggttcaataccaaaggagattggctatcttgataaacttga |
84 |
Q |
| |
|
||||||||||| | ||||| |||||||||||||||||||| ||||||| |
|
|
| T |
25653469 |
cattttcaggtacgatacccgaggagattggctatcttgatcaacttga |
25653421 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0070 (Bit Score: 124; Significance: 1e-63; HSPs: 3)
Name: scaffold0070
Description:
Target: scaffold0070; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 57 - 487
Target Start/End: Original strand, 14957 - 15387
Alignment:
| Q |
57 |
aggagattggctatcttgataaacttgaaattcttatattagcagaaaatagcttcagtggatctattccttccaacctcatgaacatgtcatcattgaa |
156 |
Q |
| |
|
|||||||||||||||||||||||||||| | || |||| | | |||||||| |||||||||||||||||||| || | ||| ||||||| | | |
|
|
| T |
14957 |
aggagattggctatcttgataaacttgagctgctattattgtctaacaatagcttaagtggatctattccttccaaaatcttcaacttgtcatcgctcac |
15056 |
T |
 |
| Q |
157 |
acaattggagtttgagcaaaattacctctcaggaattattccatcaaaaacaggatataaccttcctagcctacaatatctacacttgaataacaacaat |
256 |
Q |
| |
|
| |||||| |||| || ||| |||||||| | ||||||||||| || ||||||| ||||||||| || ||||||||| |||| || | |||||| |
|
|
| T |
15057 |
taatttggaggttgatcagaatagtctctcaggcacaattccatcaaatacgggatatagccttcctagtctgcaatatctattcttggatcataacaat |
15156 |
T |
 |
| Q |
257 |
tttgttggaaatattccaaatagcatattcaattcttctaatctcattggatttcaattgcattccaatgcatttagtggaactctacccaatattgctt |
356 |
Q |
| |
|
|||||||||||||||||||||| ||||||||| |||||||| | |||| ||||||||| |||| |||||||| ||||||||||||||||||| || || |
|
|
| T |
15157 |
tttgttggaaatattccaaataacatattcaactcttctaagttaattgattttcaattggattcgaatgcattcagtggaactctacccaatactggtt |
15256 |
T |
 |
| Q |
357 |
ttggaggtttaaggttcctcaaaacaattttcatacagaacaacaacttgataatagaagattctcttcagttctttacttccttgacaaattgtagata |
456 |
Q |
| |
|
|| ||| |||| ||| ||| || |||| ||| | ||||||| |||| |||||||||||||| ||| ||||||||||||||||||||||||||||| |
|
|
| T |
15257 |
ttagagatttatggtcccttgaagtgtttttaatatatgacaacaaattgacaatagaagattctcatcaattctttacttccttgacaaattgtagata |
15356 |
T |
 |
| Q |
457 |
ttt-aaatattcttgacttatcaggaaatcat |
487 |
Q |
| |
|
||| ||||| ||||||||||||||| |||||| |
|
|
| T |
15357 |
tttgaaata-tcttgacttatcagggaatcat |
15387 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0070; HSP #2
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 36 - 487
Target Start/End: Original strand, 34979 - 35430
Alignment:
| Q |
36 |
cattttcaggttcaataccaaaggagattggctatcttgataaacttgaaattcttatattagcagaaaatagcttcagtggatctattccttccaacct |
135 |
Q |
| |
|
||||||||||| | || || |||||||||||||||||||||||||||| | || |||| | | |||||||| ||||||||||||||||| || | |
|
|
| T |
34979 |
cattttcaggtacgattcccgaggagattggctatcttgataaacttgaggtgctattattgtctaacaatagcttaagtggatctattccttctaaaat |
35078 |
T |
 |
| Q |
136 |
catgaacatgtcatcattgaaacaattggagtttgagcaaaattacctctcaggaattattccatcaaaaacaggatataaccttcctagcctacaatat |
235 |
Q |
| |
|
| | ||| |||||||| | | |||| | |||| || ||| ||||||||| | |||||||||| || ||||||| |||||||| || |||||| |
|
|
| T |
35079 |
cttcaacttgtcatcactcactgctttggtggttgatcataatagcctctcaggcacacttccatcaaatacgggatatagccttcctaatctgcaatat |
35178 |
T |
 |
| Q |
236 |
ctacacttgaataacaacaattttgttggaaatattccaaatagcatattcaattcttctaatctcattggatttcaattgcattccaatgcatttagtg |
335 |
Q |
| |
|
||||||||| | | |||||||||||||||||||||||||||| |||||| || |||||||| ||| | | | |||| | | |||||||| |||| |
|
|
| T |
35179 |
ctacacttgtttcaaaacaattttgttggaaatattccaaataacatattaaactcttctaagctccgtcaaatcgcattggaaacaaatgcattcagtg |
35278 |
T |
 |
| Q |
336 |
gaactctacccaatattgcttttggaggtttaaggttcctcaaaacaattttcatacagaacaacaacttgataatagaagattctcttcagttctttac |
435 |
Q |
| |
|
||||||||||||||| | ||||||||| |||||| ||||| || |||||| | | ||||| || |||| |||||||||||||| ||| |||||||| |
|
|
| T |
35279 |
gaactctacccaatactacttttggagatttaagattccttgaattgtttttcacatataacaataaattgacaatagaagattctcatcaattctttac |
35378 |
T |
 |
| Q |
436 |
ttccttgacaaattgtagatattt-aaatattcttgacttatcaggaaatcat |
487 |
Q |
| |
|
|||||||||||||||||||||||| ||||| ||||||||||||||| |||||| |
|
|
| T |
35379 |
ttccttgacaaattgtagatatttgaaata-tcttgacttatcaggtaatcat |
35430 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0070; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 116 - 459
Target Start/End: Original strand, 48523 - 48863
Alignment:
| Q |
116 |
ggatctattccttccaacctcatgaacatgtcatcattgaaacaattggagtttgagcaaaattacctctcaggaattattccatcaaaaacaggatata |
215 |
Q |
| |
|
||||| ||||| ||||| ||| | ||||| |||||| ||| | | ||||| ||| ||||||||||||||||| || ||||||||||||||||| |||| |
|
|
| T |
48523 |
ggatcaattccatccaaactcctcaacatatcatcactgacatacttggatcttgtacaaaattacctctcaggcataattccatcaaaaacaggttata |
48622 |
T |
 |
| Q |
216 |
accttcctagcctacaatatctacacttgaataacaacaattttgttggaaatattccaaatagcatattcaattcttctaatctcattggatttcaatt |
315 |
Q |
| |
|
|||||||| |||||||||||| ||||| | |||||||||||||||||||||||||||| |||||||| ||||| | |||||| | || | || |
|
|
| T |
48623 |
gccttcctaagctacaatatctagacttggaaggaaacaattttgttggaaatattccaaatattatattcaacgcttctcacctcattctagttgactt |
48722 |
T |
 |
| Q |
316 |
gcattccaatgcatttagtggaactctacccaatattgcttttggaggtttaaggttcctcaaaacaattttcatacagaacaacaacttgataatagaa |
415 |
Q |
| |
|
| || ||| ||||| | ||||||| | || ||| | ||||| | |||||||||| ||||| |||||| | | ||||| | |||| |||||| |
|
|
| T |
48723 |
gaatcacaacgcattcactggaactgttcctaattt---ttttgaaaatttaaggttcttcaaatattttttcacagggtacaactatttgacaatagat |
48819 |
T |
 |
| Q |
416 |
gattctcttcagttctttacttccttgacaaattgtagatattt |
459 |
Q |
| |
|
||||| | ||||||||||| ||||||||||| |||||||||||| |
|
|
| T |
48820 |
gattcacatcagttctttaattccttgacaagttgtagatattt |
48863 |
T |
 |
Back To:
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Target: scaffold1415 (Bit Score: 105; Significance: 3e-52; HSPs: 1)
Name: scaffold1415
Description:
Target: scaffold1415; HSP #1
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 36 - 459
Target Start/End: Complemental strand, 1201 - 778
Alignment:
| Q |
36 |
cattttcaggttcaataccaaaggagattggctatcttgataaacttgaaattcttatattagcagaa-aatagcttcagtggatctattccttccaacc |
134 |
Q |
| |
|
||||||||||| | || || |||||||||||||||||||||||||||| | ||||| | | | || |||||||| |||||||||||||||||||| |
|
|
| T |
1201 |
cattttcaggtacgattcccgaggagattggctatcttgataaacttgagctg-ttatacttgtataacaatagcttaagtggatctattccttccaaaa |
1103 |
T |
 |
| Q |
135 |
tcatgaacatgtcatcattgaaacaattggagtttgagcaaaattacctctcaggaattattccatcaaaaacaggatataaccttcctagcctacaata |
234 |
Q |
| |
|
|| | ||| |||||||| | | | |||||| || | || ||| ||||||||| | |||||||||| || ||||||| |||||||| ||| || | |
|
|
| T |
1102 |
tcttcaacttgtcatcactcactgatttggaggttaatcagaatagcctctcaggcacacttccatcaaatacgggatatagccttcctaacctgcataa |
1003 |
T |
 |
| Q |
235 |
tctacacttgaataacaacaattttgttggaaatattccaaatagcatattcaattcttctaatctcattggatttcaattgcattccaatgcatttagt |
334 |
Q |
| |
|
|||||||||| || | |||||||||||||||||||||||||||| ||||||||| |||||||| || |||| |||||||||| || ||| | ||| ||| |
|
|
| T |
1002 |
tctacacttgtatcaaaacaattttgttggaaatattccaaataacatattcaactcttctaagcttattgtatttcaattggatgacaacgaattcagt |
903 |
T |
 |
| Q |
335 |
ggaactctacccaatattgcttttggaggtttaaggttcctcaaaacaattttcatacagaacaacaacttgataatagaagattctcttcagttcttta |
434 |
Q |
| |
|
|||||| ||||||||| ||||||||||| |||| | || || || | || |||| | | |||||| |||| ||| |||||||||| ||| ||||||| |
|
|
| T |
902 |
ggaactttacccaatactgcttttggagatttaggattgcttgaatcttttaacatagataccaacaatttgacaattgaagattctcatcaattcttta |
803 |
T |
 |
| Q |
435 |
cttccttgacaaattgtagatattt |
459 |
Q |
| |
|
||||||||||||||||||||||||| |
|
|
| T |
802 |
cttccttgacaaattgtagatattt |
778 |
T |
 |
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Target: scaffold0830 (Bit Score: 92; Significance: 2e-44; HSPs: 1)
Name: scaffold0830
Description:
Target: scaffold0830; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 36 - 477
Target Start/End: Original strand, 2428 - 2866
Alignment:
| Q |
36 |
cattttcaggttcaataccaaaggagattggctatcttgataaacttgaaattcttatattagcagaaaatagcttcagtggatctattccttccaacct |
135 |
Q |
| |
|
||||||||||||| ||||| ||||||||| |||||||||||||||||| |||| ||||| | | |||| ||| |||||| |||||| |||||| | |
|
|
| T |
2428 |
cattttcaggttctatacctgaggagattgtctatcttgataaacttgagcttctaatattgtctgttaataacttaagtggaactattcattccaaaat |
2527 |
T |
 |
| Q |
136 |
catgaacatgtcatcattgaaacaattggagtttgagcaaaattacctctcaggaattattccatcaaaaacaggatataaccttcctagcctacaatat |
235 |
Q |
| |
|
| | ||||||||||| || | ||| |||||| |||| | |||| |||||||| | || |||||||| || |||| |||||||| ||| ||| | |
|
|
| T |
2528 |
cttcaacatgtcatcgttaacacatttggagcttgaacgaaatagtctctcaggcacaatcccatcaaatacgggatt---ccttcctaacctgcaaaaa |
2624 |
T |
 |
| Q |
236 |
ctacacttgaataacaacaattttgttggaaatattccaaatagcatattcaattcttctaatctcattggatttcaattgcattccaatgcatttagtg |
335 |
Q |
| |
|
|||||||||||| | ||||| ||||||||||||||||||||||| || ||||| |||||||||||| ||| |||| || | | ||||| |||||||| |
|
|
| T |
2625 |
ctacacttgaatcataacaaatttgttggaaatattccaaatagtattttcaactcttctaatctcgttgaatttgaagcggttgacaatgaatttagtg |
2724 |
T |
 |
| Q |
336 |
gaactctacccaatattgcttttggaggtttaaggttcctcaaaacaattttcatacagaacaacaacttgataatagaagattctcttcagttctttac |
435 |
Q |
| |
|
||||||||||||||| ||||||| | ||||||||| ||| | | || ||||| |||||| |||| ||| || ||| ||||||| |||||||| |
|
|
| T |
2725 |
gaactctacccaataatgcttttcggaatttaaggttgctcgattcgtttatcataagtttcaacaatttgacaatcgacgatcctcttcaattctttac |
2824 |
T |
 |
| Q |
436 |
ttccttgacaaattgtagatatttaaatattcttgacttatc |
477 |
Q |
| |
|
|||||||||||||||||||||||| || ||||| ||| |||| |
|
|
| T |
2825 |
ttccttgacaaattgtagatatttgaaaattctagacatatc |
2866 |
T |
 |
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Target: chr4 (Bit Score: 91; Significance: 7e-44; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 175 - 487
Target Start/End: Complemental strand, 10325870 - 10325561
Alignment:
| Q |
175 |
aaattacctctcaggaattattccatcaaaaacaggatataaccttcctagcctacaatatctacacttgaataacaacaattttgttggaaatattcca |
274 |
Q |
| |
|
|||| ||||||| |||| ||||||||||| | ||||||| |||||||||||||||||||||||| ||| || ||||||||| ||||||||||||| |
|
|
| T |
10325870 |
aaatcacctctctcgaataattccatcaaatatgggatatagccttcctagcctacaatatctacatttgtatggtaacaattttactggaaatattcca |
10325771 |
T |
 |
| Q |
275 |
aatagcatattcaattcttctaatctcattggatttcaattgcattccaatgcatttagtggaactctacccaatattgcttttggaggtttaaggttcc |
374 |
Q |
| |
|
||||| |||||||| ||||||||||| |||| ||||| |||| | |||||||| |||||||||||||||||| ||| ||||| ||||||||||| |
|
|
| T |
10325770 |
aatagtatattcaactcttctaatcttattgaatttcgattgggtggtaatgcattcagtggaactctacccaattttg---ttggaaatttaaggttcc |
10325674 |
T |
 |
| Q |
375 |
tcaaaacaattttcatacagaacaacaacttgataatagaagattctcttcagttctttacttccttgacaaattgtagatatttaaatattcttgactt |
474 |
Q |
| |
|
|||||| | || || | ||||||| || | ||| |||||||||| ||| ||||||||||||||| ||||||||||| |||| || |||| ||||| |
|
|
| T |
10325673 |
tcaaaatatttgacacatttcacaacaatttcacaattgaagattctcatcaattctttacttccttgtcaaattgtagaaatttgaaatttctagactt |
10325574 |
T |
 |
| Q |
475 |
atcaggaaatcat |
487 |
Q |
| |
|
|||| | |||||| |
|
|
| T |
10325573 |
atcaaggaatcat |
10325561 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 36 - 151
Target Start/End: Complemental strand, 10326009 - 10325894
Alignment:
| Q |
36 |
cattttcaggttcaataccaaaggagattggctatcttgataaacttgaaattcttatattagcagaa-aatagcttcagtggatctattccttccaacc |
134 |
Q |
| |
|
||||| ||||||| |||| |||||||||||||||||||||||||||| | || |||| ||| || |||||||| |||||| | ||||||||||| |
|
|
| T |
10326009 |
catttccaggttcgatacttgaggagattggctatcttgataaacttgagttgctagtatt-gcataacaatagctttagtggagccattccttccaaaa |
10325911 |
T |
 |
| Q |
135 |
tcatgaacatgtcatca |
151 |
Q |
| |
|
|| | |||||||||||| |
|
|
| T |
10325910 |
tctttaacatgtcatca |
10325894 |
T |
 |
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