View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16123_high_50 (Length: 264)
Name: NF16123_high_50
Description: NF16123
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16123_high_50 |
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Alignment Details
Target: chr2 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 19 - 261
Target Start/End: Complemental strand, 41151057 - 41150815
Alignment:
| Q |
19 |
gaaggtttagtctttgaagatcctcttctttcatgccaacagaaacaattcctgatccatgtttaatcataaaagccacatctttggtactaattagaga |
118 |
Q |
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| T |
41151057 |
gaaggtttagtctttgaagatcctcttctttcatgccaacagaaacaattcctgatccatgtttaatcataaaagccacatctttggtactaattagaga |
41150958 |
T |
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| Q |
119 |
tgcagcctttataagatttccttcaacattgttgttttcatcatctacaacgattacaaacttcnnnnnnntattgatctaggagttagatatgatcaat |
218 |
Q |
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| T |
41150957 |
tgcagcctttataagatttccttcaacattgttgttttcatcatctacaacgattacaaacttcaaaaaaatattgatctaggagttagatatgatcaat |
41150858 |
T |
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| Q |
219 |
ccattatttaatagcatgctaatttatttatctgtatgttcag |
261 |
Q |
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| T |
41150857 |
ccattatttaatagcatgctaatttatttatttgtatgttcag |
41150815 |
T |
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