View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16123_low_47 (Length: 294)
Name: NF16123_low_47
Description: NF16123
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16123_low_47 |
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Alignment Details
Target: chr7 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 17 - 287
Target Start/End: Original strand, 21388982 - 21389254
Alignment:
| Q |
17 |
agataaaatcctagatccacccctatcgacaactataaaaaagaatgcatggaatatgtattaagttgattttgaagatacaaattaattaattaatcaa |
116 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21388982 |
agataaaatcctagatccacccctatcgacaactataaaaaagaatgcatggaatatgtattaagttgattttgaagatacaaattaattaattaatcaa |
21389081 |
T |
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| Q |
117 |
ctataccataacaactttcaatatatttacctct--nnnnnnntcaagatatttttataatttaccaaaaccgtgtagtcactagctattgtctttgtcc |
214 |
Q |
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|||||||||||||||||||||||||||||||||| |||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21389082 |
ctataccataacaactttcaatatatttacctctaaaaaaaaatcaatatattttcataatttaccaaaaccgtgtagtcactagctattgtctttgtcc |
21389181 |
T |
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| Q |
215 |
tgcttgtgtttaatcatacatgtagtgctagctgtcactgatctttaatggaagtgaatttggattacctttg |
287 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
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| T |
21389182 |
tgcttgtgtttaatcatacatgtagtgctagctgtcactgatctttaatggaagtgaatatggattacctttg |
21389254 |
T |
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