View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16123_low_48 (Length: 289)

Name: NF16123_low_48
Description: NF16123
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16123_low_48
NF16123_low_48
[»] chr4 (75 HSPs)
chr4 (1-239)||(5441407-5441645)
chr4 (1-239)||(27768059-27768297)
chr4 (1-237)||(54341147-54341383)
chr4 (1-239)||(37828367-37828605)
chr4 (1-238)||(32322094-32322331)
chr4 (1-236)||(51320924-51321159)
chr4 (1-228)||(37915830-37916057)
chr4 (1-224)||(54853448-54853671)
chr4 (69-239)||(48261198-48261368)
chr4 (1-238)||(23987217-23987444)
chr4 (1-237)||(30967276-30967502)
chr4 (1-238)||(41725128-41725359)
chr4 (1-238)||(49501485-49501714)
chr4 (1-238)||(49507550-49507779)
chr4 (1-206)||(50018254-50018449)
chr4 (1-238)||(49834799-49835016)
chr4 (3-238)||(12913229-12913455)
chr4 (1-238)||(44770821-44771057)
chr4 (1-206)||(55302846-55303051)
chr4 (3-224)||(32683988-32684188)
chr4 (1-209)||(25331134-25331342)
chr4 (1-216)||(9163079-9163286)
chr4 (22-238)||(28483923-28484127)
chr4 (1-209)||(41881077-41881286)
chr4 (1-209)||(1112896-1113104)
chr4 (1-209)||(12112948-12113156)
chr4 (1-209)||(34228578-34228786)
chr4 (1-218)||(36479228-36479434)
chr4 (1-197)||(22202018-22202214)
chr4 (1-209)||(32950831-32951039)
chr4 (69-238)||(5800049-5800208)
chr4 (22-209)||(42786708-42786895)
chr4 (6-140)||(29649731-29649865)
chr4 (1-209)||(7007377-7007585)
chr4 (1-197)||(39307260-39307456)
chr4 (1-209)||(39479350-39479560)
chr4 (1-183)||(19740929-19741111)
chr4 (75-197)||(3436670-3436792)
chr4 (1-197)||(1044812-1045006)
chr4 (8-209)||(30009672-30009873)
chr4 (69-209)||(41320881-41321021)
chr4 (1-209)||(37046445-37046655)
chr4 (110-218)||(8711978-8712086)
chr4 (1-209)||(46635643-46635845)
chr4 (1-167)||(28370927-28371093)
chr4 (10-175)||(25446062-25446227)
chr4 (1-174)||(28541701-28541874)
chr4 (69-174)||(7249795-7249900)
chr4 (110-209)||(24736447-24736546)
chr4 (10-184)||(53275851-53276025)
chr4 (75-209)||(56445350-56445474)
chr4 (69-209)||(31314737-31314867)
chr4 (74-209)||(27454073-27454208)
chr4 (89-209)||(24130976-24131097)
chr4 (69-162)||(23465026-23465119)
chr4 (78-146)||(25504697-25504765)
chr4 (1-214)||(40537150-40537348)
chr4 (1-197)||(41581796-41581991)
chr4 (130-238)||(36727916-36728023)
chr4 (89-235)||(20021424-20021570)
chr4 (129-214)||(11090435-11090520)
chr4 (1-55)||(20021347-20021401)
chr4 (1-48)||(24131128-24131175)
chr4 (1-45)||(29855684-29855728)
chr4 (1-48)||(37915788-37915835)
chr4 (104-142)||(12193135-12193173)
chr4 (16-53)||(8584007-8584044)
chr4 (1-50)||(20021305-20021354)
chr4 (1-42)||(31314890-31314931)
chr4 (1-50)||(41881279-41881328)
chr4 (1-53)||(37915746-37915798)
chr4 (17-53)||(40143822-40143858)
chr4 (8-48)||(41320788-41320828)
chr4 (17-53)||(44929923-44929959)
chr4 (17-53)||(54509760-54509796)
[»] chr7 (66 HSPs)
chr7 (1-237)||(23101296-23101532)
chr7 (1-239)||(28342345-28342583)
chr7 (1-239)||(29614728-29614966)
chr7 (1-230)||(39784097-39784326)
chr7 (1-238)||(3022924-3023161)
chr7 (1-238)||(18838387-18838624)
chr7 (1-228)||(7993140-7993367)
chr7 (1-238)||(9882202-9882438)
chr7 (1-238)||(28034770-28035007)
chr7 (1-238)||(8675331-8675567)
chr7 (1-238)||(33382635-33382872)
chr7 (1-239)||(509654-509882)
chr7 (1-238)||(44121875-44122102)
chr7 (1-238)||(12740371-12740607)
chr7 (3-237)||(40460683-40460907)
chr7 (1-238)||(37327925-37328152)
chr7 (1-235)||(44256734-44256968)
chr7 (1-238)||(46405406-46405633)
chr7 (1-218)||(10068464-10068682)
chr7 (1-238)||(41827312-41827539)
chr7 (89-238)||(37972832-37972981)
chr7 (1-238)||(39028095-39028322)
chr7 (1-238)||(29585513-29585739)
chr7 (1-218)||(12963699-12963911)
chr7 (1-238)||(32883780-32884002)
chr7 (1-209)||(973189-973397)
chr7 (1-209)||(47914271-47914479)
chr7 (1-209)||(40996643-40996851)
chr7 (1-197)||(43581096-43581292)
chr7 (1-209)||(30440801-30441009)
chr7 (10-209)||(7719254-7719453)
chr7 (1-238)||(33892212-33892452)
chr7 (75-221)||(43187339-43187485)
chr7 (16-209)||(7718356-7718549)
chr7 (8-209)||(18914729-18914930)
chr7 (1-209)||(12893413-12893621)
chr7 (1-209)||(34695278-34695486)
chr7 (1-209)||(44343390-44343598)
chr7 (1-209)||(47879173-47879381)
chr7 (1-136)||(19251537-19251672)
chr7 (1-197)||(20275269-20275465)
chr7 (74-209)||(32142911-32143046)
chr7 (1-218)||(3797052-3797259)
chr7 (1-209)||(17001037-17001225)
chr7 (1-209)||(34009017-34009226)
chr7 (75-209)||(39219371-39219504)
chr7 (74-174)||(43679492-43679592)
chr7 (74-209)||(7113530-7113665)
chr7 (1-173)||(25805690-25805862)
chr7 (1-200)||(47066701-47066881)
chr7 (1-163)||(10676460-10676622)
chr7 (1-209)||(9179878-9180076)
chr7 (78-210)||(19810874-19810996)
chr7 (1-127)||(44623352-44623478)
chr7 (69-136)||(31638948-31639015)
chr7 (72-133)||(447852-447913)
chr7 (1-99)||(29893079-29893177)
chr7 (77-184)||(727594-727691)
chr7 (191-238)||(29893173-29893220)
chr7 (1-48)||(48117748-48117795)
chr7 (3-146)||(1470291-1470432)
chr7 (10-52)||(10616955-10616997)
chr7 (109-218)||(10617024-10617134)
chr7 (17-53)||(27418644-27418680)
chr7 (20-52)||(32630687-32630719)
chr7 (17-53)||(40097140-40097176)
[»] chr1 (55 HSPs)
chr1 (3-239)||(6312573-6312809)
chr1 (1-239)||(25612154-25612392)
chr1 (1-239)||(51701577-51701815)
chr1 (1-234)||(29396358-29396591)
chr1 (1-238)||(9322466-9322703)
chr1 (1-234)||(15835023-15835256)
chr1 (1-224)||(48177442-48177665)
chr1 (1-238)||(28387359-28387596)
chr1 (1-238)||(46328039-46328276)
chr1 (1-238)||(38536065-38536292)
chr1 (1-238)||(38558283-38558510)
chr1 (1-224)||(18798488-18798691)
chr1 (12-221)||(29219294-29219493)
chr1 (1-218)||(9577418-9577635)
chr1 (1-206)||(21222144-21222349)
chr1 (1-219)||(48668770-48668975)
chr1 (1-209)||(19451803-19452011)
chr1 (1-197)||(35279669-35279865)
chr1 (3-209)||(37014635-37014841)
chr1 (1-238)||(45272584-45272809)
chr1 (3-193)||(5495117-5495297)
chr1 (1-209)||(50192545-50192754)
chr1 (1-209)||(28824368-28824575)
chr1 (1-207)||(35679125-35679331)
chr1 (1-209)||(6304247-6304456)
chr1 (74-209)||(49198264-49198399)
chr1 (1-209)||(45760004-45760213)
chr1 (12-209)||(47780719-47780916)
chr1 (69-194)||(32588963-32589088)
chr1 (1-126)||(49230883-49231008)
chr1 (72-197)||(31572204-31572329)
chr1 (1-209)||(47654346-47654555)
chr1 (69-197)||(49418149-49418277)
chr1 (69-184)||(45536009-45536124)
chr1 (78-209)||(29556178-29556310)
chr1 (69-175)||(48524384-48524490)
chr1 (1-169)||(730145-730314)
chr1 (69-197)||(33025578-33025696)
chr1 (69-161)||(51085860-51085952)
chr1 (1-48)||(8141284-8141331)
chr1 (77-136)||(955823-955882)
chr1 (69-127)||(47784451-47784509)
chr1 (1-50)||(22183367-22183416)
chr1 (72-127)||(31622536-31622591)
chr1 (94-196)||(38319996-38320098)
chr1 (1-48)||(953816-953863)
chr1 (91-137)||(43885157-43885203)
chr1 (16-53)||(10896845-10896882)
chr1 (1-50)||(28824568-28824617)
chr1 (1-42)||(47784426-47784466)
chr1 (1-50)||(49198464-49198512)
chr1 (17-53)||(1928406-1928442)
chr1 (17-53)||(36402293-36402329)
chr1 (1-53)||(48524274-48524326)
chr1 (17-53)||(52705439-52705475)
[»] chr8 (47 HSPs)
chr8 (1-239)||(14782099-14782337)
chr8 (1-239)||(44725774-44726012)
chr8 (1-238)||(39467433-39467670)
chr8 (1-228)||(19717856-19718083)
chr8 (1-224)||(9288436-9288659)
chr8 (1-224)||(18958706-18958929)
chr8 (1-238)||(26856070-26856308)
chr8 (1-239)||(18305935-18306163)
chr8 (1-222)||(10295360-10295583)
chr8 (1-238)||(43166655-43166892)
chr8 (1-238)||(7466339-7466566)
chr8 (1-224)||(4403111-4403334)
chr8 (1-226)||(32497529-32497744)
chr8 (1-222)||(16362200-16362411)
chr8 (1-224)||(42305774-42305987)
chr8 (1-209)||(26374424-26374632)
chr8 (1-222)||(31623699-31623900)
chr8 (1-209)||(2704813-2705021)
chr8 (1-209)||(24501807-24502015)
chr8 (1-209)||(42938111-42938319)
chr8 (22-224)||(37857144-37857336)
chr8 (1-194)||(10392246-10392439)
chr8 (69-209)||(42937423-42937563)
chr8 (11-209)||(7506893-7507091)
chr8 (1-209)||(5576614-5576823)
chr8 (77-221)||(39189798-39189940)
chr8 (1-209)||(42735271-42735479)
chr8 (1-209)||(23115163-23115370)
chr8 (1-127)||(4031334-4031460)
chr8 (1-209)||(41479101-41479299)
chr8 (1-209)||(43959662-43959859)
chr8 (69-209)||(4950010-4950150)
chr8 (1-118)||(32711367-32711484)
chr8 (75-146)||(8410455-8410526)
chr8 (69-184)||(13478269-13478384)
chr8 (140-187)||(4031294-4031341)
chr8 (70-126)||(41070018-41070074)
chr8 (20-53)||(14061595-14061628)
chr8 (17-53)||(1606015-1606051)
chr8 (17-53)||(2112837-2112873)
chr8 (78-126)||(9770497-9770545)
chr8 (17-53)||(29260278-29260314)
chr8 (17-53)||(35142088-35142124)
chr8 (20-52)||(38806882-38806914)
chr8 (17-53)||(41386872-41386908)
chr8 (17-53)||(42275018-42275054)
chr8 (17-53)||(43605366-43605402)
[»] chr3 (81 HSPs)
chr3 (1-239)||(36674095-36674333)
chr3 (1-239)||(34483995-34484233)
chr3 (1-238)||(44906479-44906716)
chr3 (1-237)||(32580180-32580415)
chr3 (3-222)||(11431531-11431750)
chr3 (1-238)||(17946291-17946528)
chr3 (1-238)||(48379160-48379397)
chr3 (1-238)||(26107264-26107501)
chr3 (1-234)||(52810381-52810614)
chr3 (1-238)||(52617937-52618168)
chr3 (18-234)||(18749632-18749848)
chr3 (1-228)||(40897147-40897375)
chr3 (1-239)||(54628846-54629085)
chr3 (1-239)||(31646251-31646487)
chr3 (1-238)||(51737693-51737930)
chr3 (1-226)||(10728629-10728844)
chr3 (1-211)||(50903233-50903446)
chr3 (1-222)||(37454864-37455075)
chr3 (1-228)||(39038043-39038260)
chr3 (1-226)||(50762038-50762253)
chr3 (1-193)||(20832995-20833187)
chr3 (1-218)||(6035039-6035256)
chr3 (1-234)||(23753377-23753589)
chr3 (1-239)||(10660538-10660752)
chr3 (1-209)||(996081-996289)
chr3 (1-209)||(19253830-19254038)
chr3 (1-209)||(20498212-20498420)
chr3 (1-209)||(37820472-37820680)
chr3 (1-209)||(10139141-10139349)
chr3 (22-209)||(3206200-3206387)
chr3 (11-209)||(6589577-6589775)
chr3 (1-209)||(3999640-3999848)
chr3 (3-206)||(33807796-33808000)
chr3 (1-209)||(40246847-40247055)
chr3 (1-209)||(44762032-44762240)
chr3 (69-238)||(39842460-39842619)
chr3 (6-221)||(44276397-44276598)
chr3 (11-209)||(54625605-54625803)
chr3 (69-209)||(29448853-29448993)
chr3 (1-194)||(35337738-35337930)
chr3 (1-209)||(25418369-25418577)
chr3 (1-197)||(33996548-33996744)
chr3 (75-209)||(5825139-5825273)
chr3 (1-209)||(53929123-53929331)
chr3 (22-132)||(539476-539586)
chr3 (3-196)||(29030011-29030203)
chr3 (140-217)||(45862983-45863060)
chr3 (1-189)||(51699495-51699682)
chr3 (2-197)||(52114532-52114728)
chr3 (3-234)||(15492836-15493061)
chr3 (74-169)||(22057838-22057933)
chr3 (1-120)||(6975752-6975868)
chr3 (122-209)||(6131228-6131315)
chr3 (1-146)||(1440010-1440156)
chr3 (69-209)||(27899415-27899545)
chr3 (3-98)||(12103634-12103729)
chr3 (93-209)||(1439889-1440005)
chr3 (11-160)||(55235198-55235347)
chr3 (1-55)||(18749573-18749627)
chr3 (74-118)||(52080003-52080047)
chr3 (69-119)||(23535896-23535946)
chr3 (1-39)||(27240408-27240446)
chr3 (154-206)||(33807678-33807730)
chr3 (1-48)||(6131327-6131374)
chr3 (1-50)||(3206392-3206441)
chr3 (3-48)||(6975712-6975757)
chr3 (141-182)||(12103733-12103774)
chr3 (16-53)||(19552150-19552187)
chr3 (1-50)||(23753582-23753631)
chr3 (1-42)||(27899389-27899430)
chr3 (17-53)||(26555860-26555896)
chr3 (17-53)||(27593198-27593234)
chr3 (17-53)||(30588885-30588921)
chr3 (17-53)||(36055009-36055045)
chr3 (17-53)||(36786017-36786053)
chr3 (17-53)||(38629802-38629838)
chr3 (17-53)||(38682472-38682508)
chr3 (3-43)||(44276352-44276392)
chr3 (17-53)||(50900449-50900485)
chr3 (21-53)||(52024201-52024233)
chr3 (17-53)||(53184075-53184111)
[»] chr6 (19 HSPs)
chr6 (1-239)||(31895699-31895937)
chr6 (1-224)||(14262412-14262635)
chr6 (1-228)||(34759025-34759253)
chr6 (1-239)||(34773412-34773639)
chr6 (21-238)||(7497099-7497315)
chr6 (1-238)||(30385034-30385259)
chr6 (72-236)||(31067567-31067721)
chr6 (89-239)||(4200401-4200541)
chr6 (1-209)||(6197472-6197680)
chr6 (1-197)||(2300744-2300940)
chr6 (1-209)||(1391627-1391835)
chr6 (1-197)||(7051848-7052044)
chr6 (1-209)||(29076601-29076810)
chr6 (1-209)||(29111574-29111784)
chr6 (1-189)||(28002668-28002856)
chr6 (72-137)||(3848284-3848348)
chr6 (165-209)||(2238678-2238722)
chr6 (17-53)||(10644016-10644052)
chr6 (17-53)||(30877898-30877934)
[»] chr5 (29 HSPs)
chr5 (1-239)||(14000069-14000307)
chr5 (1-238)||(13925935-13926172)
chr5 (1-238)||(1152068-1152305)
chr5 (1-238)||(7947538-7947775)
chr5 (24-234)||(39852372-39852582)
chr5 (1-214)||(4550246-4550459)
chr5 (1-232)||(4240433-4240654)
chr5 (1-238)||(5949113-5949339)
chr5 (1-228)||(40013687-40013904)
chr5 (1-238)||(1461113-1461340)
chr5 (1-209)||(22746301-22746501)
chr5 (1-209)||(21147071-21147279)
chr5 (1-227)||(37013918-37014124)
chr5 (1-197)||(5272925-5273121)
chr5 (10-209)||(33656035-33656234)
chr5 (1-197)||(139277-139473)
chr5 (1-197)||(7016745-7016941)
chr5 (3-209)||(27458944-27459149)
chr5 (1-206)||(32157891-32158100)
chr5 (75-184)||(849225-849334)
chr5 (1-151)||(14465279-14465429)
chr5 (1-170)||(6460796-6460965)
chr5 (69-209)||(9689730-9689869)
chr5 (1-209)||(9220711-9220909)
chr5 (17-53)||(17518474-17518510)
chr5 (1-50)||(5273114-5273163)
chr5 (20-53)||(9689338-9689371)
chr5 (20-53)||(28594444-28594477)
chr5 (17-53)||(40410636-40410672)
[»] scaffold0543 (1 HSPs)
scaffold0543 (1-234)||(10564-10797)
[»] chr2 (42 HSPs)
chr2 (1-230)||(18177272-18177501)
chr2 (1-239)||(26788789-26789026)
chr2 (1-238)||(28844560-28844797)
chr2 (1-238)||(33135628-33135864)
chr2 (1-238)||(25288164-25288401)
chr2 (9-238)||(10657419-10657648)
chr2 (1-224)||(28740275-28740488)
chr2 (6-228)||(3463682-3463894)
chr2 (1-237)||(13833401-13833627)
chr2 (1-238)||(6224535-6224753)
chr2 (86-238)||(43078653-43078805)
chr2 (1-209)||(16269696-16269904)
chr2 (1-209)||(24776360-24776568)
chr2 (1-177)||(7026609-7026775)
chr2 (1-209)||(12407385-12407593)
chr2 (1-209)||(20605241-20605449)
chr2 (1-209)||(22551760-22551968)
chr2 (1-209)||(31170621-31170829)
chr2 (8-209)||(14198574-14198775)
chr2 (1-238)||(215206-215430)
chr2 (1-209)||(35317067-35317275)
chr2 (1-209)||(43847651-43847859)
chr2 (1-235)||(10125270-10125497)
chr2 (75-238)||(379016-379169)
chr2 (1-209)||(5093044-5093252)
chr2 (74-197)||(32125331-32125454)
chr2 (1-207)||(305464-305670)
chr2 (1-218)||(3574852-3575049)
chr2 (1-209)||(9120131-9120339)
chr2 (1-184)||(1789447-1789630)
chr2 (160-238)||(7027051-7027129)
chr2 (1-160)||(44765780-44765939)
chr2 (1-118)||(26601288-26601405)
chr2 (69-125)||(21370631-21370687)
chr2 (1-48)||(20605157-20605204)
chr2 (17-53)||(24193595-24193631)
chr2 (1-50)||(24776318-24776367)
chr2 (17-53)||(11534881-11534917)
chr2 (17-53)||(29940991-29941027)
chr2 (8-48)||(32125262-32125302)
chr2 (17-53)||(34028935-34028971)
chr2 (17-53)||(45546977-45547013)
[»] scaffold0110 (1 HSPs)
scaffold0110 (1-238)||(39583-39820)
[»] scaffold1504 (1 HSPs)
scaffold1504 (1-238)||(867-1101)
[»] scaffold0042 (1 HSPs)
scaffold0042 (19-238)||(58042-58262)
[»] scaffold0306 (1 HSPs)
scaffold0306 (1-239)||(13886-14114)
[»] scaffold0152 (2 HSPs)
scaffold0152 (1-239)||(21213-21441)
scaffold0152 (129-239)||(28473-28584)
[»] scaffold0054 (2 HSPs)
scaffold0054 (69-238)||(36876-37042)
scaffold0054 (1-42)||(37027-37068)
[»] scaffold0037 (1 HSPs)
scaffold0037 (1-197)||(100215-100411)
[»] scaffold0400 (1 HSPs)
scaffold0400 (1-209)||(15028-15236)
[»] scaffold0365 (1 HSPs)
scaffold0365 (1-209)||(15671-15879)
[»] scaffold0839 (1 HSPs)
scaffold0839 (98-235)||(3661-3798)
[»] scaffold0004 (1 HSPs)
scaffold0004 (1-209)||(102097-102307)
[»] scaffold0922 (1 HSPs)
scaffold0922 (1-134)||(4204-4337)
[»] scaffold0347 (1 HSPs)
scaffold0347 (129-228)||(14892-14991)
[»] scaffold0151 (1 HSPs)
scaffold0151 (22-209)||(38600-38786)
[»] scaffold0113 (1 HSPs)
scaffold0113 (1-209)||(38890-39098)
[»] scaffold0276 (1 HSPs)
scaffold0276 (1-214)||(529-742)
[»] scaffold0007 (1 HSPs)
scaffold0007 (77-152)||(199905-199980)
[»] scaffold0010 (3 HSPs)
scaffold0010 (1-55)||(233741-233795)
scaffold0010 (1-55)||(234589-234643)
scaffold0010 (1-55)||(222573-222627)
[»] scaffold0202 (1 HSPs)
scaffold0202 (17-53)||(16546-16582)
[»] scaffold0016 (1 HSPs)
scaffold0016 (17-53)||(81784-81820)


Alignment Details
Target: chr4 (Bit Score: 206; Significance: 1e-113; HSPs: 75)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 5441407 - 5441645
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||       ||||||||||||||||||||||||||||||||    
T  5441407 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcg 5441506  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5441507 aaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 5441606  T
Q  201 attgtttttattttaaaagttactatctttttcttctca 239  Q
    |||||||||||||||||||||||||||||||||||||||    
T  5441607 attgtttttattttaaaagttactatctttttcttctca 5441645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 27768059 - 27768297
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||       ||||||||||||||||||||||||||||||||    
T  27768059 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcg 27768158  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27768159 aaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 27768258  T
Q  201 attgtttttattttaaaagttactatctttttcttctca 239  Q
    |||||||||||||||||||||||||||||||||||||||    
T  27768259 attgtttttattttaaaagttactatctttttcttctca 27768297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 54341147 - 54341383
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||       ||||||||||||||||||||||||||||||||    
T  54341147 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcg 54341246  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54341247 aaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 54341346  T
Q  201 attgtttttattttaaaagttactatctttttcttct 237  Q
    |||||||||||||||||||||||||| ||||||||||    
T  54341347 attgtttttattttaaaagttactatttttttcttct 54341383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 37828605 - 37828367
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||       ||||||||||||||||||||||||||||||||    
T  37828605 tcaagactctttgtcatttttaaaaagtcttgaggtattcaatcaagatttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcg 37828506  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  37828505 aaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaaaaagaaaaagtctttcatgaaaagatgagatttcttgag 37828406  T
Q  201 attgtttttattttaaaagttactatctttttcttctca 239  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  37828405 attgtttttattttaaaaattactatctttttcttctca 37828367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 32322094 - 32322331
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||       ||||||||||||||||||||||||||||||||    
T  32322094 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcatcacttaaaaatagtcttgtggtattcaaaatcattcaaatttcg 32322193  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||||||||||||    
T  32322194 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaataagaaaatgtctttcataaaaagatgagatttcttgag 32322293  T
Q  201 attgtttttattttaaaagttactatctttttcttctc 238  Q
    ||||||||| |||||| |||||  |||| |||||||||    
T  32322294 attgtttttcttttaatagttatcatctctttcttctc 32322331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 51320924 - 51321159
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||| || ||       ||||||||||||||||||||||||||||||||    
T  51320924 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcg 51321023  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    |||||||||||||||||||| ||||||||||||||||||  ||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  51321024 aaggattgtttaataaattggattttgatggattttgtgtaattttatagtgtaattttaacaagaaaaagtttttcatgaaaagatgagatttcttgag 51321123  T
Q  201 attgtttttattttaaaagttactatctttttcttc 236  Q
    ||||||||| |||||||||||||||||| |||||||    
T  51321124 attgtttttcttttaaaagttactatctctttcttc 51321159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 37915830 - 37916057
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||||||| | ||||||||||||||||||||||||||||||||||| |||||| || ||       ||||||||||||||||||||||||||||||||    
T  37915830 tcaagactctctatcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcg 37915929  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||| |||||| |||||    
T  37915930 aaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtacttttaacaagaaaaagtcattcatgaaaagataagatttattgag 37916029  T
Q  201 attgtttttattttaaaagttactatct 228  Q
    ||||||||| ||||||||||||||||||    
T  37916030 attgtttttcttttaaaagttactatct 37916057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 54853671 - 54853448
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||||||||| |||||||||||||||||||| |||||||||||||| |||||| || ||       ||||||||||||||||||| |||||||||||     
T  54853671 tcaagactctttttcattttaaaaaagtcttgaagtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaattattcaaatttca 54853572  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  54853571 aaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaaatctttcatgaaaagatgagatttcttgag 54853472  T
Q  201 attgtttttattttaaaagttact 224  Q
    ||||||||| ||||||||||||||    
T  54853471 attgtttttcttttaaaagttact 54853448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 69 - 239
Target Start/End: Original strand, 48261198 - 48261368
Alignment:
Q  69 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 168  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  48261198 gtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 48261297  T
Q  169 aagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatctttttcttctca 239  Q
    || ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48261298 aaatctttcatgaaaatatgagatttcttgagattgtttttattttaaaagttactatctttttcttctca 48261368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 23987217 - 23987444
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| | |||||| || ||       ||||||||||||||||||||||||||||||||    
T  23987217 tcaatactctttgtcattttaaaaaagtcttgaggtattcaatcaaaacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcg 23987316  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    |||||||||||||||||||  ||||||||||||          |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23987317 aaggattgtttaataaattagattttgatggat----------tttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 23987406  T
Q  201 attgtttttattttaaaagttactatctttttcttctc 238  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  23987407 attgtttttcttttaaaagttactatctctttcttctc 23987444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 30967502 - 30967276
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||| || ||       |||||||||||||||||||||||||||||||     
T  30967502 tcaagactctttgtcattttaaaaaagttttgaggtattcaatcaagatttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttca 30967403  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    ||||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||| ||||||||||||| || ||||||||||||    
T  30967402 aaggattgtttaataaattg----------gattttgtgggattttgtagtgtaattttaacaagaaaaaatctttcatgaaaaaataagatttcttgag 30967313  T
Q  201 attgtttttattttaaaagttactatctttttcttct 237  Q
    ||||||||| |||||||||||||||||| ||||||||    
T  30967312 attgttttttttttaaaagttactatctctttcttct 30967276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 41725128 - 41725359
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||| |||||||||||||||||||||||||||| |||| ||||||||| |||||| ||  |       |||||||| ||||||||||||||||||||| |    
T  41725128 tcaatactctttgtcattttaaaaaagtcttgatgtatgcaatcaagacttttcatcacctaaaaaaagtcttgtgatattcaaaatcattcaaattttg 41725227  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    |||||||||||||   |||| ||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||      
T  41725228 aaggattgtttaa---attggattttgatgaattttgtgggattttatagtgtaattttaacaagaaaaaatctttcatgaaaagatgagatttcttg-- 41725322  T
Q  201 attgtttttattttaaaagttactatctttttcttctc 238  Q
     ||| |||||||||||||||||||||||||||||||||    
T  41725323 -ttggttttattttaaaagttactatctttttcttctc 41725359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 49501714 - 49501485
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    ||||||||||||||||||||||| || ||||||||||||||||||||| |||||| || ||       ||||||||| ||||||||||||||||||||||    
T  49501714 tcaagactctttgtcattttaaataaatcttgaggtattcaatcaagacttttcatcacttaaaaaatgtcttgtggcattcaaaatcattcaaatttcg 49501615  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttc--atgaaaagatgagatttcttg 198  Q
    || |||||||||||||||||          |||||||||| ||||||||||||||||||||||||||||||||||||  || ||||||||||||||||||    
T  49501614 aatgattgtttaataaattg----------gattttgtggaattttgtagtgtaattttaacaagaaaaagtctttcatataaaaagatgagatttcttg 49501525  T
Q  199 agattgtttttattttaaaagttactatctttttcttctc 238  Q
    ||||||||||| |||||||||||| ||||| |||||||||    
T  49501524 agattgtttttcttttaaaagttattatctctttcttctc 49501485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 49507779 - 49507550
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    ||||||||||||||||||||||| || ||||||||||||||||||||| |||||| || ||       ||||||||| ||||||||||||||||||||||    
T  49507779 tcaagactctttgtcattttaaataaatcttgaggtattcaatcaagacttttcatcacttaaaaaatgtcttgtggcattcaaaatcattcaaatttcg 49507680  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttc--atgaaaagatgagatttcttg 198  Q
    || |||||||||||||||||          |||||||||| ||||||||||||||||||||||||||||||||||||  || ||||||||||||||||||    
T  49507679 aatgattgtttaataaattg----------gattttgtggaattttgtagtgtaattttaacaagaaaaagtctttcatataaaaagatgagatttcttg 49507590  T
Q  199 agattgtttttattttaaaagttactatctttttcttctc 238  Q
    ||||||||||| |||||||||||| ||||| |||||||||    
T  49507589 agattgtttttcttttaaaagttattatctctttcttctc 49507550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 50018254 - 50018449
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||| |||||  |||||       |||||||||||||||| ||||||||||||| |    
T  50018254 tcaagactctttgtcattttaaaaaagtcttgaggtattccatcaagacttttcttcatttaaaaaaagtcttgtggtattcaagatcattcaaattttg 50018353  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    |||||||||||||||||||||||||| ||          ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||    
T  50018354 aaggattgtttaataaattgaattttaat----------ggattttgtagtgtaattttaacaagaaaaagtctttcaagaaaagatgagatttattgag 50018443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 49835016 - 49834799
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||||||||||||||||||| |||| |||||||||||||||||||| |||||| || ||       ||||||||||||||||||||||||||||||||    
T  49835016 tcaagactctttgtcattttaacaaaggcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcg 49834917  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    ||||||||||||||||||||                    ||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  49834916 aaggattgtttaataaattg--------------------gattttgtagtgtaattttaacaagaagaagtctttcattaaaagatgagatttcttgag 49834837  T
Q  201 attgtttttattttaaaagttactatctttttcttctc 238  Q
    ||||||||| | |||||||||||||||| |||||||||    
T  49834836 attgtttttctattaaaagttactatctatttcttctc 49834799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 3 - 238
Target Start/End: Original strand, 12913229 - 12913455
Alignment:
Q  3 aagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaa 102  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||       ||||  |||||||||||||||||||||||| |||    
T  12913229 aagactctttgtcattttaaaaaagtcttgaggtattcaatcaagctttttcatcatttaaaaaaagtctcatggtattcaaaatcattcaaattttgaa 12913328  T
Q  103 ggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagat 202  Q
    ||||||||||||||||||          |||||||||||||||| ||||| ||||||||||||||||||| ||||||||| | |||||||||||||  ||    
T  12913329 ggattgtttaataaattg----------gattttgtgggattttctagtgaaattttaacaagaaaaagtatttcatgaagacatgagatttcttggaat 12913418  T
Q  203 tgtttttattttaaaag-ttactatctttttcttctc 238  Q
    | ||||| ||||||||| ||||||||  |||||||||    
T  12913419 tatttttcttttaaaagtttactatcagtttcttctc 12913455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 44771057 - 44770821
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggta-ttcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttc 99  Q
    |||||||||||||||||||||||||| |||||||||| |||||||||||||||||| || ||        |||  ||||||||||||||||||||||||     
T  44771057 tcaagactctttgtcattttaaaaaaatcttgaggtaattcaatcaagatttttcatcacttaaaaaaaatctcatggtattcaaaatcattcaaatttt 44770958  T
Q  100 gaaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttga 199  Q
    ||||||||||||||||||||| |||||| |||||||||||||||||| ||||| |||||||| |||||||||||||||||||  | ||||||||||   |    
T  44770957 gaaggattgtttaataaattggattttggtggattttgtgggattttctagtgaaattttaagaagaaaaagtctttcatgacgacatgagatttc---a 44770861  T
Q  200 gattgtttttattttaaaag-ttactatctttttcttctc 238  Q
     |||| |||| ||||||||| ||||||||| |||| ||||    
T  44770860 tattgcttttcttttaaaagtttactatctctttcctctc 44770821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 55302846 - 55303051
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||| |||||||||||||||||||||| || ||||||||||||||| | || | || ||       |||| |||||||||||||||||||||||||||    
T  55302846 tcaagattctttgtcattttaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcg 55302945  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    ||||||||||||||||||   |||||||||||| |||||||||||| ||||| ||||||| || |||||||||||||||||||| |||||||||||| ||    
T  55302946 aaggattgtttaataaatcagattttgatggatattgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaag 55303045  T
Q  201 attgtt 206  Q
    ||||||    
T  55303046 attgtt 55303051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 3 - 224
Target Start/End: Complemental strand, 32684188 - 32683988
Alignment:
Q  3 aagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaa 102  Q
    |||| ||||||||||||||||||||| ||||||||||||||||||| |||||| |||||       ||||||||||||||||||||||||||||||||||    
T  32684188 aagattctttgtcattttaaaaaagtattgaggtattcaatcaagacttttcatcatttaaaaaa-gtcttgtggtattcaaaatcattcaaatttcgaa 32684090  T
Q  103 ggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagat 202  Q
    ||||||||||||||||||                    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  32684089 ggattgtttaataaattg--------------------gattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttattgagat 32684010  T
Q  203 tgtttttattttaaaagttact 224  Q
    ||||||| ||||||||||||||    
T  32684009 tgtttttcttttaaaagttact 32683988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 25331134 - 25331342
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||| |||||||||||| |||||||||||| ||||||||||||||| | || | || ||       |||| ||| ||||||||||||||||||||||     
T  25331134 tcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtgatattcaaaatcattcaaatttca 25331233  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    ||||||||||||||||||   ||||||||||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||  |    
T  25331234 aaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttagg 25331333  T
Q  201 attgttttt 209  Q
    |||||||||    
T  25331334 attgttttt 25331342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 9163079 - 9163286
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    ||||||||||||||||||| |||||||||||| |||||||||||||||||||||| ||  |       |||||||| |||||||||||||||||||||||    
T  9163079 tcaagactctttgtcatttaaaaaaagtcttgtggtattcaatcaagatttttcatcacataaaaaaagtcttgtgatattcaaaatcattcaaatttcg 9163178  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||| ||||| ||||||| || |||        ||||||||| ||||||||||||  |    
T  9163179 aaggattgtttaataaattaaattttgatggattttgtggaattttctagtgaaattttagcatgaa--------tcatgaaaacatgagatttcttatg 9163270  T
Q  201 attgtttttattttaa 216  Q
    ||||||||| ||||||    
T  9163271 attgttttttttttaa 9163286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 22 - 238
Target Start/End: Original strand, 28483923 - 28484127
Alignment:
Q  22 aaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattga 121  Q
    ||||||||||||||||||||||||||| |||||| || ||       |||| |||||||||||||||||||||||||||||||||| ||||||||||||     
T  28483923 aaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtctcgtggtattcaaaatcattcaaatttcgaaggattatttaataaattg- 28484021  T
Q  122 attttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagtt 221  Q
             |||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||| ||||| ||||| |||||||| ||    
T  28484022 ---------gattttgtaggattttgtagtgtaattt-aacaagaaaaagtctttcatgaaaagacgagatttcttaagattatttttcttttaaaa-tt 28484110  T
Q  222 actatctttttcttctc 238  Q
    ||||||| |||||||||    
T  28484111 actatctctttcttctc 28484127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 41881286 - 41881077
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnn-gtcttgtggtattcaaaatcattcaaatttc 99  Q
    |||||| |||||||||||| |||||||||||| ||||||||||||||| | || | || ||        || | ||||||||||||||||||||||||||    
T  41881286 tcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaagtttagtggtattcaaaatcattcaaatttc 41881187  T
Q  100 gaaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttga 199  Q
    |||||||||||||||||||   ||||||||||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||      
T  41881186 gaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttag 41881087  T
Q  200 gattgttttt 209  Q
    ||||||||||    
T  41881086 gattgttttt 41881077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 1112896 - 1113104
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||| |||||||||||| |||||||||||| ||||||||||||||| | || | || ||       |||| ||||||||||||||||||||||||||     
T  1112896 tcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttca 1112995  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    || |||||||||||||||   ||||||||||||||||||||||||  ||||  |||||||||| |||||||||||||||||||| ||||||||||||  |    
T  1112996 aatgattgtttaataaatcagattttgatggattttgtgggatttcctagtaaaattttaacatgaaaaagtctttcatgaaaacatgagatttcttagg 1113095  T
Q  201 attgttttt 209  Q
    |||||||||    
T  1113096 attgttttt 1113104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 12112948 - 12113156
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||| |||||||||||| |||||||||||| ||||||||||||| | | || | || ||       ||||  ||||||||||||||||||||||||||    
T  12112948 tcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaaaactcttaatcacttaaaaaaagtctaatggtattcaaaatcattcaaatttcg 12113047  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    ||||||||||||||||||   ||||| ||||||||||||| ||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||| |    
T  12113048 aaggattgtttaataaatcagattttaatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttggg 12113147  T
Q  201 attgttttt 209  Q
    |||||||||    
T  12113148 attgttttt 12113156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 34228786 - 34228578
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||| |||||||||||| ||||||||| || ||||||||||||| ||| || | || ||       |||| |||||||||||||||||| ||||||||    
T  34228786 tcaagattctttgtcatttaaaaaaagtcatgtggtattcaatcaaaattcttaatcacttaaaaaaagtctagtggtattcaaaatcattgaaatttcg 34228687  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    || |||||||||||||||   ||||||||||||||||| ||||||| ||||| ||||||| || |||||||||||||||||||| |||||||||||| ||    
T  34228686 aatgattgtttaataaatcagattttgatggattttgtaggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaag 34228587  T
Q  201 attgttttt 209  Q
    |||||||||    
T  34228586 attgttttt 34228578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 36479434 - 36479228
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||| |||||||||||||||||||||||||||||||||||||| ||||||||||| || ||       |||| |||||||||||||| ||||||||||||    
T  36479434 tcaaaactctttgtcattttaaaaaagtcttgaggtattcaattaagatttttcatcacttaaaaaaagtctcgtggtattcaaaattattcaaatttcg 36479335  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    ||||||| |||||||||||| |||||||||||||||           ||||| ||||||| ||| ||||||||||| ||||||| |||||||||||||||    
T  36479334 aaggattatttaataaattggattttgatggatttt-----------tagtgaaattttagcaaaaaaaagtcttttatgaaaacatgagatttcttgag 36479246  T
Q  201 attgtttttattttaaaa 218  Q
    ||| ||||| ||||||||    
T  36479245 attatttttcttttaaaa 36479228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 197
Target Start/End: Original strand, 22202018 - 22202214
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||| |||||||||||| |||||||||||| ||||||||||||||| | || | || ||       |||| |||||||||||||||||| |||||||     
T  22202018 tcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattaaaatttca 22202117  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 197  Q
    || |||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| || |||||||||    
T  22202118 aaagattgtttaataaataaaattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacattagatttctt 22202214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 32951039 - 32950831
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||| | |||||||||| ||||||||| || ||||||||||||||| | || | || ||       |||| |||||||||||||||||||||||||||    
T  32951039 tcaagattatttgtcatttaaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcg 32950940  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    ||||||||||||||||||   ||||||||| ||||||||||||||| ||||| ||||||| || |||||| ||||||||||||| |||||||||||| ||    
T  32950939 aaggattgtttaataaatcagattttgatgaattttgtgggattttctagtgaaattttagcatgaaaaattctttcatgaaaacatgagatttcttaag 32950840  T
Q  201 attgttttt 209  Q
    ||| |||||    
T  32950839 atttttttt 32950831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 69 - 238
Target Start/End: Original strand, 5800049 - 5800208
Alignment:
Q  69 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 168  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||          ||||||||| |||||||||| |||||||||||||||||    
T  5800049 gtcttgtggtattcaaaatcattcaaatttcaaaggattgtttaataaattg----------gattttgtgagattttgtagagtaattttaacaagaaa 5800138  T
Q  169 aagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatctttttcttctc 238  Q
    |||||||| |||||||||| |||||| |||||||||||||| |||||||||||| ||||| |||| ||||    
T  5800139 aagtctttaatgaaaagataagattttttgagattgtttttcttttaaaagttattatctctttcatctc 5800208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 22 - 209
Target Start/End: Original strand, 42786708 - 42786895
Alignment:
Q  22 aaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattga 121  Q
    ||||||||||| ||||||||||||||| | || | |||||       |||| |||||||||||||||||||||||||||||||||||||||||||||       
T  42786708 aaaaagtcttgtggtattcaatcaagactcttaatcatttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcat 42786807  T
Q  122 attttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 209  Q
    ||||||||||||||||||| ||||| ||||| ||||||| ||  ||||||||||||||||||| ||||||||||||  ||||||||||    
T  42786808 attttgatggattttgtggaattttctagtgaaattttatcataaaaaagtctttcatgaaaacatgagatttcttatgattgttttt 42786895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 6 - 140
Target Start/End: Complemental strand, 29649865 - 29649731
Alignment:
Q  6 actctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaagga 105  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||| || ||       |||||||||||||||||||||||||||||||||| ||    
T  29649865 actctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaaga 29649766  T
Q  106 ttgtttaataaattgaattttgatggattttgtgg 140  Q
    ||||||||||||||| |||||||||||||||||||    
T  29649765 ttgtttaataaattggattttgatggattttgtgg 29649731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 7007377 - 7007585
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||| ||| |||||||| ||||||||| || ||||||||||||||| | || | || ||       |||| |||||||||||||||||||||||||||    
T  7007377 tcaagattctctgtcatttaaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcg 7007476  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    ||||||||||||||||||   ||||||||| ||||||||||||||| ||||| ||||||| || |||||  | ||||||||||| |||||||||||| ||    
T  7007477 aaggattgtttaataaatcagattttgatgaattttgtgggattttctagtgaaattttagcatgaaaatttttttcatgaaaacatgagatttcttaag 7007576  T
Q  201 attgttttt 209  Q
    |||||||||    
T  7007577 attgttttt 7007585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 197
Target Start/End: Complemental strand, 39307456 - 39307260
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||| | |||| |||||||||||||||||| ||||||||||||||||| |||| |||||       ||||||||||||||| |||||||||||||||     
T  39307456 tcaagattttttgccattttaaaaaagtcttgtggtattcaatcaagattcttcatcatttaaaaaaagtcttgtggtattcataatcattcaaatttct 39307357  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 197  Q
    || |||| |||||| |||||| |||||||| ||||||||||||||| ||||| |||||||||| |||||||| | | || |||| ||||||||||||    
T  39307356 aaagattatttaatgaattgagttttgatgaattttgtgggattttctagtgaaattttaacatgaaaaagtttctgataaaaacatgagatttctt 39307260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 39479560 - 39479350
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccattt--nnnnnnngtcttgtggtattcaaaatcattcaaattt 98  Q
    |||||| || ||||||||| |||||||||||| ||||||||||||||| | || | || ||         | ||||||||||||||||||||||||||||    
T  39479560 tcaagattccttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaaagacttgtggtattcaaaatcattcaaattt 39479461  T
Q  99 cgaaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttg 198  Q
    ||||| ||||||||||||||   ||||||||||||||||||||||||| ||||| ||||||| || |||||||||||||||||||  ||||||||||||     
T  39479460 cgaagaattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcaggaaaaagtctttcatgaaagcatgagatttctta 39479361  T
Q  199 agattgttttt 209  Q
     ||||||||||    
T  39479360 ggattgttttt 39479350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 19741111 - 19740929
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||| ||||||||||||  |||||||| || |||||||| |||||| |||| | || ||       ||||||||||||| ||||||||||||||||||    
T  19741111 tcaagattctttgtcatttataaaaagtcatgtggtattcagtcaagacttttaatcacttaaaaaaagtcttgtggtattaaaaatcattcaaatttcg 19741012  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaa 183  Q
    |||||||||||||||||||  ||||||||||||||||||||||||| ||||| ||||||| |  |||||||||||||||||||    
T  19741011 aaggattgtttaataaattagattttgatggattttgtgggattttctagtgaaattttagcttgaaaaagtctttcatgaaa 19740929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 75 - 197
Target Start/End: Original strand, 3436670 - 3436792
Alignment:
Q  75 tggtattcaaaatcattcaaatttcgaaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtct 174  Q
    ||||||||||||||||||||||||||||||||||||||||||||   ||||||||| ||||||||||||||||||||| |||||||||| |||||||| |    
T  3436670 tggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatgaattttgtgggattttgtagtgaaattttaacatgaaaaagttt 3436769  T
Q  175 ttcatgaaaagatgagatttctt 197  Q
    |||||||||| || |||||||||    
T  3436770 ttcatgaaaacataagatttctt 3436792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 197
Target Start/End: Original strand, 1044812 - 1045006
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||| || |||||||||  ||||||||||| ||||||||||||||| | || | || ||       |||| ||||||||||||| ||||||| |||||    
T  1044812 tcaagattccttgtcattt--aaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaaccattcaactttcg 1044909  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 197  Q
    ||||||||||||||||||   ||||||||||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| || |||||||||    
T  1044910 aaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttctt 1045006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 8 - 209
Target Start/End: Complemental strand, 30009873 - 30009672
Alignment:
Q  8 tctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggatt 107  Q
    ||||| |||||| ||||||||| || ||||||||||||||| | || | || ||       |||| |||||||||||||||||| ||||||  || ||||    
T  30009873 tctttatcatttaaaaaaagtcctgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcatttaaattttaaatgatt 30009774  T
Q  108 gtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgttt 207  Q
    |||||||||||   ||||||||||||||||||||||||| ||||  ||||||| || |||||||||||||||||||| |||||||||||| |||||||||    
T  30009773 gtttaataaatcagattttgatggattttgtgggattttctagtaaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaagattgttt 30009674  T
Q  208 tt 209  Q
    ||    
T  30009673 tt 30009672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 69 - 209
Target Start/End: Original strand, 41320881 - 41321021
Alignment:
Q  69 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 168  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||| || ||||| |||||||  | ||||    
T  41320881 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggatgttctagtgaaattttagtatgaaa 41320980  T
Q  169 aagtctttcatgaaaagatgagatttcttgagattgttttt 209  Q
    ||||||||||| |||| |||||||||||| |||||| ||||    
T  41320981 aagtctttcataaaaacatgagatttcttaagattgatttt 41321021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 37046655 - 37046445
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnn-gtcttgtggtattcaaaatcattcaaatttc 99  Q
    |||||| |||||||||||| |||||||| ||| ||||||||||||||| | || | || ||        |||| ||| |||| |||||||||||||||||    
T  37046655 tcaagattctttgtcatttaaaaaaagttttgtggtattcaatcaagactcttaatcacttaaaaaaaagtctagtgatatttaaaatcattcaaatttc 37046556  T
Q  100 gaaggattgtttaataaattgaattttgatggattttgtgggattttgtagtg-taattttaacaagaaaaagtctttcatgaaaagatgagatttcttg 198  Q
    |||||||||||||||||||   ||||||||||||||||||| ||||| |||||  ||||||| || |||||||||||||||||||| ||||||||||||     
T  37046555 gaaggattgtttaataaatcagattttgatggattttgtggaattttctagtgaaaattttagcatgaaaaagtctttcatgaaaatatgagatttctta 37046456  T
Q  199 agattgttttt 209  Q
     ||||||||||    
T  37046455 ggattgttttt 37046445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 110 - 218
Target Start/End: Original strand, 8711978 - 8712086
Alignment:
Q  110 ttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 209  Q
    ||||||||||| ||||||||||||||||||||||||| ||||| ||||||| |||||||||||||||||| |||| ||||||||||||||||||||||||    
T  8711978 ttaataaattggattttgatggattttgtgggattttatagtgaaattttagcaagaaaaagtctttcatcaaaacatgagatttcttgagattgttttt 8712077  T
Q  210 attttaaaa 218  Q
     ||||||||    
T  8712078 cttttaaaa 8712086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 46635845 - 46635643
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||| |||||||||||| |||||||||||| ||||||||||||||| | || | || ||       || | || ||||||||||||||||||||||||    
T  46635845 tcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtttagtagtattcaaaatcattcaaatttcg 46635746  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    ||||||||||||||||||  ||    ||| |||||||||||||||| ||||| ||||||| || ||||||||||||||| |||| ||||||||||||  |    
T  46635745 aaggattgtttaataaat--aa----gattgattttgtgggattttttagtgaaattttagcatgaaaaagtctttcataaaaacatgagatttcttagg 46635652  T
Q  201 attgttttt 209  Q
    |||||||||    
T  46635651 attgttttt 46635643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 167
Target Start/End: Original strand, 28370927 - 28371093
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||| |||||||||| |||||||||||||||||| ||||||||||| | |||| | || ||       ||||  ||||||||||||||||||||||||      
T  28370927 tcaaaactctttgtcgttttaaaaaagtcttgagatattcaatcaaaactttttatcacttaaataaagtctcatggtattcaaaatcattcaaatttta 28371026  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaa 167  Q
    ||||||||||||||||||||||||||| || ||||||||||||||| ||||| |||||||| |||||    
T  28371027 aaggattgtttaataaattgaattttggtgaattttgtgggattttctagtgaaattttaagaagaa 28371093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 10 - 175
Target Start/End: Original strand, 25446062 - 25446227
Alignment:
Q  10 tttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgt 109  Q
    |||||||||| |||||| ||||| ||||||||||||||| | || | || ||       |||| ||||||||||||||||||||||||||||| ||||||    
T  25446062 tttgtcatttaaaaaaattcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaatgattgt 25446161  T
Q  110 ttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctt 175  Q
    |||||||||   ||||||||||||||||||||||||| ||||| ||||||| || |||||||||||    
T  25446162 ttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaaaagtctt 25446227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 28541701 - 28541874
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||| |||||||||||| |||||||||| | ||||||||||||||| | || | || ||       |||| |||||||||||||||||||||||||||    
T  28541701 tcaagattctttgtcatttaaaaaaagtctcgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcg 28541800  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtct 174  Q
    || |||||||||||||||   ||||||||||||||||||| ||||| ||||| ||||||| || ||||||||||    
T  28541801 aatgattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtct 28541874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 69 - 174
Target Start/End: Complemental strand, 7249900 - 7249795
Alignment:
Q  69 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 168  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||| ||||| ||||||| || ||||    
T  7249900 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 7249801  T
Q  169 aagtct 174  Q
    ||||||    
T  7249800 aagtct 7249795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 110 - 209
Target Start/End: Original strand, 24736447 - 24736546
Alignment:
Q  110 ttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 209  Q
    ||||||||||| |||||||||||||||||| |||||| ||||| |||||||||||||| |||||||||||||||| ||||||||||||| ||||||||||    
T  24736447 ttaataaattggattttgatggattttgtgagattttctagtgaaattttaacaagaagaagtctttcatgaaaacatgagatttcttgtgattgttttt 24736546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 10 - 184
Target Start/End: Original strand, 53275851 - 53276025
Alignment:
Q  10 tttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgt 109  Q
    |||||||||| ||||||||||||  ||||||||||||||||||| | || ||       |||| ||| |||| |||||||||||||||||||||||||||    
T  53275851 tttgtcatttaaaaaaagtcttgtagtattcaatcaagatttttaatcacttaaaaaaagtctagtgatatttaaaatcattcaaatttcgaaggattgt 53275950  T
Q  110 ttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 184  Q
     ||||||||   |||||||||||||||||| |||||| || |  ||||||| || ||||||||||||||| ||||    
T  53275951 gtaataaatcagattttgatggattttgtgagattttctaataaaattttagcatgaaaaagtctttcattaaaa 53276025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 75 - 209
Target Start/End: Complemental strand, 56445474 - 56445350
Alignment:
Q  75 tggtattcaaaatcattcaaatttcgaaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtct 174  Q
    |||||||||||||||||||||||||||| |||||||||||||||||          |||||||||||||||| ||||| || |||| |||||||||||||    
T  56445474 tggtattcaaaatcattcaaatttcgaatgattgtttaataaattg----------gattttgtgggattttctagtgaaactttagcaagaaaaagtct 56445385  T
Q  175 ttcatgaaaagatgagatttcttgagattgttttt 209  Q
    ||||| || | ||||||||||||||||||||||||    
T  56445384 ttcataaagacatgagatttcttgagattgttttt 56445350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 69 - 209
Target Start/End: Complemental strand, 31314867 - 31314737
Alignment:
Q  69 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 168  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||            |||||||||||||||| ||||| ||||||| || ||||    
T  31314867 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatca----------gattttgtgggattttctagtgaaattttagcatgaaa 31314778  T
Q  169 aagtctttcatgaaaagatgagatttcttgagattgttttt 209  Q
    |||||||||||||||| ||||||||||||  ||||||||||    
T  31314777 aagtctttcatgaaaacatgagatttcttaggattgttttt 31314737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 74 - 209
Target Start/End: Complemental strand, 27454208 - 27454073
Alignment:
Q  74 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtc 173  Q
    ||||||||||||||||||||||||| ||| |||| ||||||||||   ||||||||| ||||||||| ||||| ||||| ||||||  || |||||||||    
T  27454208 gtggtattcaaaatcattcaaattttgaaagattatttaataaatcagattttgatgaattttgtggaattttctagtgaaattttggcatgaaaaagtc 27454109  T
Q  174 tttcatgaaaagatgagatttcttgagattgttttt 209  Q
    ||||||||||| || | |||| || |||||||||||    
T  27454108 tttcatgaaaacataatatttgttaagattgttttt 27454073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 89 - 209
Target Start/End: Complemental strand, 24131097 - 24130976
Alignment:
Q  89 attcaaatttcgaaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaag-aaaaagtctttcatgaaaagat 187  Q
    |||||||||||||| |||||||||||||||   ||||||||||||||||||||||||| ||||| |||||||  | | ||||| ||||||||||||| ||    
T  24131097 attcaaatttcgaatgattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttaggatgaaaaaaatctttcatgaaaacat 24130998  T
Q  188 gagatttcttgagattgttttt 209  Q
    ||||||||||  ||||||||||    
T  24130997 gagatttcttaggattgttttt 24130976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 69 - 162
Target Start/End: Original strand, 23465026 - 23465119
Alignment:
Q  69 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaac 162  Q
    |||| ||||||||||||| |||||||||||||||||||||||||||||||   | ||||||||||||||||||||||| ||||  |||||||||    
T  23465026 gtctagtggtattcaaaaccattcaaatttcgaaggattgtttaataaatcagaatttgatggattttgtgggattttctagttaaattttaac 23465119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 78 - 146
Target Start/End: Complemental strand, 25504765 - 25504697
Alignment:
Q  78 tattcaaaatcattcaaatttcgaaggattgtttaataaattgaattttgatggattttgtgggatttt 146  Q
    |||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||    
T  25504765 tattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggatttt 25504697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 40537348 - 40537150
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||| | | || | || ||           ||||||||||||||||||| ||||||||    
T  40537348 tcaagactctttgtcatttaaaaaaagtcttgtggtattcaatcaaaactcttaatcacttaaaaaa-----tgtggtattcaaaatcatttaaatttcg 40537254  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    || |||||||||||||||   ||||||||||||||||||          ||| ||||||| || |||||||||||||||||||| ||||||||||||  |    
T  40537253 aatgattgtttaataaatctgattttgatggattttgtg----------gtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttagg 40537164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 197
Target Start/End: Complemental strand, 41581991 - 41581796
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||||  ||||||||||||||||||||||| |||||||| | |||| |||||   | ||       |||| |||||||| | | |||||||||||| |    
T  41581991 tcaagacattttgtcattttaaaaaagtcttgtggtattcagttaagaattttcttaacttaaaaaaagtctcgtggtatttagagtcattcaaattttg 41581892  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaag-aaaaagtctttcatgaaaagatgagatttctt 197  Q
    ||  |||||||||||||||| |||  |||  ||||||||||||||| ||||| |||||||||| | ||||| | ||||||| ||| ||||||||||||    
T  41581891 aataattgtttaataaattggatt--gatatattttgtgggattttctagtgaaattttaacatgaaaaaaatatttcatgtaaacatgagatttctt 41581796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 130 - 238
Target Start/End: Complemental strand, 36728023 - 36727916
Alignment:
Q  130 ggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatctt 229  Q
    ||||||||| ||||||| ||||| ||||||||||||||||| ||||||||| | | ||||||||| |||||||||||||| |||||||  ||||| ||      
T  36728023 ggattttgtaggattttttagtgaaattttaacaagaaaaaatctttcatg-agacatgagattttttgagattgttttttttttaaagtttactgtcac 36727925  T
Q  230 tttcttctc 238  Q
    |||||||||    
T  36727924 tttcttctc 36727916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 89 - 235
Target Start/End: Original strand, 20021424 - 20021570
Alignment:
Q  89 attcaaatttcgaaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaac-aagaaaaagtctttcatgaaaagat 187  Q
    ||||||||||  |||||||||||||||||||  |||||| |||||||| ||||||||| || || ||||||||| || ||||| ||||||||||| | ||    
T  20021424 attcaaattttaaaggattgtttaataaattagattttgctggattttatgggattttttaatgaaattttaacaaaaaaaaaatctttcatgaagacat 20021523  T
Q  188 gagatttcttgagattgtttttattttaaaagttactatctttttctt 235  Q
     ||||||| || ||||  ||||  ||| ||||||||||||| ||||||    
T  20021524 aagatttcatgggattactttt-ctttgaaagttactatctctttctt 20021570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 129 - 214
Target Start/End: Original strand, 11090435 - 11090520
Alignment:
Q  129 tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttatttt 214  Q
    |||||||||||||||||| ||||| ||||||| ||  ||||||||||| || |||| ||||||||||||  |||||||||| ||||    
T  11090435 tggattttgtgggattttttagtgaaattttagcattaaaaagtctttaataaaaacatgagatttcttaggattgtttttctttt 11090520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 20021347 - 20021401
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttca 55  Q
    |||||| ||||||||||||||||||| |||||| |||||||||||||| ||||||    
T  20021347 tcaagattctttgtcattttaaaaaaatcttgaagtattcaatcaagacttttca 20021401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 24131175 - 24131128
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 48  Q
    |||||| |||||||||||| |||||||||||| |||||||||||||||    
T  24131175 tcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaaga 24131128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 29855684 - 29855728
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatca 45  Q
    |||||||| ||||||||||||||||| | ||||||||||||||||    
T  29855684 tcaagactgtttgtcattttaaaaaaattttgaggtattcaatca 29855728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 37915788 - 37915835
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 48  Q
    |||||||| ||||||| || |||||||||||| |||||||||||||||    
T  37915788 tcaagactttttgtcacttaaaaaaagtcttgtggtattcaatcaaga 37915835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 104 - 142
Target Start/End: Original strand, 12193135 - 12193173
Alignment:
Q  104 gattgtttaataaattgaattttgatggattttgtggga 142  Q
    ||||||||||||| |||||||||| ||||||||||||||    
T  12193135 gattgtttaataagttgaattttggtggattttgtggga 12193173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 53
Target Start/End: Complemental strand, 8584044 - 8584007
Alignment:
Q  16 attttaaaaaagtcttgaggtattcaatcaagattttt 53  Q
    |||||| |||||||||| ||||||||||||||||||||    
T  8584044 attttataaaagtcttgtggtattcaatcaagattttt 8584007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 20021305 - 20021354
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 50  Q
    |||||||||||||  |||| |||||||| ||| |||||||||||||||||    
T  20021305 tcaagactctttgcaatttaaaaaaagttttgtggtattcaatcaagatt 20021354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 31314931 - 31314890
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaa 42  Q
    |||||| |||||||||||| |||||||||||| |||||||||    
T  31314931 tcaagattctttgtcatttaaaaaaagtcttgtggtattcaa 31314890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 41881328 - 41881279
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 50  Q
    ||||||||||||   ||||||||||||||||| | |||||||||||||||    
T  41881328 tcaagactctttccaattttaaaaaagtcttgtgttattcaatcaagatt 41881279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 37915746 - 37915798
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagattttt 53  Q
    |||||||| ||||| | || |||||||||||| ||||||||||||||| ||||    
T  37915746 tcaagactttttgtaacttaaaaaaagtcttgtggtattcaatcaagactttt 37915798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 53
Target Start/End: Original strand, 40143822 - 40143858
Alignment:
Q  17 ttttaaaaaagtcttgaggtattcaatcaagattttt 53  Q
    ||||||||||||||| |||||||||||||||| ||||    
T  40143822 ttttaaaaaagtctttaggtattcaatcaagactttt 40143858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 48
Target Start/End: Original strand, 41320788 - 41320828
Alignment:
Q  8 tctttgtcattttaaaaaagtcttgaggtattcaatcaaga 48  Q
    ||||| |||||| |||||||||||| |||||||||||||||    
T  41320788 tctttatcatttaaaaaaagtcttgtggtattcaatcaaga 41320828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 53
Target Start/End: Original strand, 44929923 - 44929959
Alignment:
Q  17 ttttaaaaaagtcttgaggtattcaatcaagattttt 53  Q
    ||||| |||||||||| ||||||||||||||||||||    
T  44929923 ttttataaaagtcttgtggtattcaatcaagattttt 44929959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 53
Target Start/End: Original strand, 54509760 - 54509796
Alignment:
Q  17 ttttaaaaaagtcttgaggtattcaatcaagattttt 53  Q
    ||||||||||||||| |||||||||||||||| ||||    
T  54509760 ttttaaaaaagtctttaggtattcaatcaagactttt 54509796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 204; Significance: 1e-111; HSPs: 66)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 23101296 - 23101532
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||       ||||||||||||||||||||||||||||||||    
T  23101296 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcg 23101395  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23101396 aaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 23101495  T
Q  201 attgtttttattttaaaagttactatctttttcttct 237  Q
    |||||||||||||||||||||||||||||||||||||    
T  23101496 attgtttttattttaaaagttactatctttttcttct 23101532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 28342345 - 28342583
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||| |||||| |||||       ||||||||||||||||||||||||||||||||    
T  28342345 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcgagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcg 28342444  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28342445 aaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 28342544  T
Q  201 attgtttttattttaaaagttactatctttttcttctca 239  Q
    |||||||||||||||||||||||||||||||||||||||    
T  28342545 attgtttttattttaaaagttactatctttttcttctca 28342583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 29614966 - 29614728
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||       |||||||| |||||||||||||||||||||||    
T  29614966 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtgatattcaaaatcattcaaatttcg 29614867  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29614866 aaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 29614767  T
Q  201 attgtttttattttaaaagttactatctttttcttctca 239  Q
    ||| |||||||||||||||||||||||||||||||||||    
T  29614766 attatttttattttaaaagttactatctttttcttctca 29614728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 39784097 - 39784326
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||       ||||||||||||||||||||||| ||||||||    
T  39784097 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcatttaaatttcg 39784196  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39784197 aaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 39784296  T
Q  201 attgtttttattttaaaagttactatcttt 230  Q
    ||||||||||||||||||||||||||||||    
T  39784297 attgtttttattttaaaagttactatcttt 39784326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 3022924 - 3023161
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||| || ||       ||||||||||||||||||||||||||||||||    
T  3022924 tcaagactttttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcg 3023023  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  3023024 aaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtttttcatgaaaagatgagatttcttgag 3023123  T
Q  201 attgtttttattttaaaagttactatctttttcttctc 238  Q
    ||||||||| |||||||||||| ||||| |||||||||    
T  3023124 attgtttttcttttaaaagttagtatctctttcttctc 3023161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 18838387 - 18838624
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||| |||||| |  ||       ||||||||||||||||||||||||||||||||    
T  18838387 tcaagactctttgtaattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttaaaaaaagtcttgtggtattcaaaatcattcaaatttcg 18838486  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    || ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  18838487 aaagattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgagatttcttgag 18838586  T
Q  201 attgtttttattttaaaagttactatctttttcttctc 238  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  18838587 attgtttttcttttaaaagttactatctctttcttctc 18838624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 171; E-Value: 7e-92
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 7993140 - 7993367
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    ||||||||||||| |||||||||||||||||||||||||||||||| | |||||| || ||       ||||| ||||||||||||||||||||||||||    
T  7993140 tcaagactctttgccattttaaaaaagtcttgaggtattcaatcaaaacttttcatcacttaaaaaaagtcttatggtattcaaaatcattcaaatttcg 7993239  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  7993240 aaggattgtttaataaattgaattttgatggattgtgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagataagatttcttgag 7993339  T
Q  201 attgtttttattttaaaagttactatct 228  Q
    ||||||||| ||||||||||||||||||    
T  7993340 attgtttttcttttaaaagttactatct 7993367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 9882438 - 9882202
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||| || ||       ||||||||||||||||||||||||||||||||    
T  9882438 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcg 9882339  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    || ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||| |||||||||||||||    
T  9882338 aatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaagaagaaaaagtctttcat-aaaaaatgagatttcttgag 9882240  T
Q  201 attgtttttattttaaaagttactatctttttcttctc 238  Q
    ||||||||| |||||||||||| ||||| |||||||||    
T  9882239 attgtttttcttttaaaagttattatctctttcttctc 9882202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 28035007 - 28034770
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||||| ||||||||||||||||||||||||| ||||||||||||| |||||| || ||       ||||||||||||||||||| |||||||||||     
T  28035007 tcaagactttttgtcattttaaaaaagtcttgagatattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaattattcaaatttca 28034908  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  28034907 aaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaaaaaaaagtctttcatgaaaagatgagatttcttgag 28034808  T
Q  201 attgtttttattttaaaagttactatctttttcttctc 238  Q
    ||||||||| ||||| |||||||||||| |||||||||    
T  28034807 attgtttttcttttacaagttactatctctttcttctc 28034770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 8675331 - 8675567
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||| |||||| || ||       ||||||||||||||||||||||| ||| ||||    
T  8675331 tcaaaactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcatttaaacttcg 8675430  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||    
T  8675431 aaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaaatcttttatgaaaagatgagatttcttgag 8675530  T
Q  201 attgtttttattttaaaagttactatctttttcttctc 238  Q
    ||||||||| |||| ||||||||||||| |||||||||    
T  8675531 attgtttttctttt-aaagttactatctatttcttctc 8675567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 33382635 - 33382872
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||| || ||       ||||  ||||||||||||||||| ||||||||    
T  33382635 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtctcatggtattcaaaatcatttaaatttcg 33382734  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || ||    
T  33382735 aaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtcttttatgaaaagatgagatttatttag 33382834  T
Q  201 attgtttttattttaaaagttactatctttttcttctc 238  Q
    ||||||||| |||||||| ||||||||| |||||||||    
T  33382835 attgtttttcttttaaaatttactatctctttcttctc 33382872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 509654 - 509882
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||| |||||| |||||       ||||||||||||||||||||||||||||||||    
T  509654 tcaagactatttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcg 509753  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    || ||||||||||||||||| ||||||||          |||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  509754 aacgattgtttaataaattggattttgat----------ggattttgtagtgggattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 509843  T
Q  201 attgtttttattttaaaagttactatctttttcttctca 239  Q
    |||||||||||||||||||||||||||||||||||||||    
T  509844 attgtttttattttaaaagttactatctttttcttctca 509882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 44122102 - 44121875
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||| || ||        |||||||||||||||||||||||||||||||    
T  44122102 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaaatcttgtggtattcaaaatcattcaaatttcg 44122003  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    |||||||||||||||||||| |||||||||||||||||          |||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  44122002 aaggattgtttaataaattggattttgatggattttgt----------agtgtaattttaacaagaaaaagtctttaatgaaaagatgagattttttgag 44121913  T
Q  201 attgtttttattttaaaagttactatctttttcttctc 238  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  44121912 attgtttttcttttaaaagttactatctctttcttctc 44121875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 12740371 - 12740607
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||| ||||||||||||| |||||||||||||||||| ||||||||||||||| |||||       |||| ||||||||||||||||||||||||||     
T  12740371 tcaagattctttgtcatttttaaaaagtcttgaggtatttaatcaagatttttcatcatttaaaaaaagtctcgtggtattcaaaatcattcaaatttca 12740470  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    |||||||||||||||||| || ||||||| |||||||||||||||| ||||||||||||||||||| |||||||||||| ||||||||||||||||| ||    
T  12740471 aaggattgtttaataaatgga-ttttgatagattttgtgggattttatagtgtaattttaacaagagaaagtctttcataaaaagatgagatttcttaag 12740569  T
Q  201 attgtttttattttaaaagttactatctttttcttctc 238  Q
    ||||||||  |||||||||||||| ||| |||||||||    
T  12740570 attgttttacttttaaaagttactgtctctttcttctc 12740607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 3 - 237
Target Start/End: Complemental strand, 40460907 - 40460683
Alignment:
Q  3 aagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaa 102  Q
    |||||||||||||||||||||||||||||||| ||||||||||||| |||||| || ||       ||||||||||||||||||||||||||||||||||    
T  40460907 aagactctttgtcattttaaaaaagtcttgagatattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaa 40460808  T
Q  103 ggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagat 202  Q
     ||||||||||||||||| |||||||||||||||||          |||||||||||||||||||||| ||||||||||||| |||||||||||||||||    
T  40460807 tgattgtttaataaattggattttgatggattttgt----------agtgtaattttaacaagaaaaaatctttcatgaaaatatgagatttcttgagat 40460718  T
Q  203 tgtttttattttaaaagttactatctttttcttct 237  Q
    ||||||| |||||||||||||||||| ||| ||||    
T  40460717 tgtttttcttttaaaagttactatctctttgttct 40460683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 37327925 - 37328152
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||  | ||       |||||||||||||||||||||||||||||||     
T  37327925 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcattacttaaaaaaagtcttgtggtattcaaaatcattcaaatttca 37328024  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    |||||||||||||||||||||||||||||||||          |||||||| |||||||||||| |||||||||||||||||||||| |||||| |||||    
T  37328025 aaggattgtttaataaattgaattttgatggat----------tttgtagtataattttaacaaaaaaaagtctttcatgaaaagataagattttttgag 37328114  T
Q  201 attgtttttattttaaaagttactatctttttcttctc 238  Q
    ||||||||| ||||||||||||||||||  ||||||||    
T  37328115 attgtttttcttttaaaagttactatctccttcttctc 37328152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 44256968 - 44256734
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||||| ||||||||||||||||| |||| |||||||||||||||| |||||| || ||       || | |||||||||||||||||||||||||||    
T  44256968 tcaagactttttgtcattttaaaaaaatcttaaggtattcaatcaagacttttcatcacttaaaaaaagtatcgtggtattcaaaatcattcaaatttcg 44256869  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    || ||||||||||||||||| |||| |||| ||||||| |||||||| |||||||||||||||||||||||| |||||| |||| ||||||||| |||||    
T  44256868 aatgattgtttaataaattggatttggatgaattttgttggattttgcagtgtaattttaacaagaaaaagtttttcatcaaaatatgagattttttgag 44256769  T
Q  201 attgtttttattttaaaagttactatctttttctt 235  Q
    ||||||||| |||||||||||| ||||| ||||||    
T  44256768 attgtttttcttttaaaagttattatctctttctt 44256734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 46405633 - 46405406
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||| |||||| || ||       |||||||||||||||||||||||||||||||     
T  46405633 tcaagactctttgtcgttttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttca 46405534  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    || ||||||||||||||||| |||||||||||||||||||          |||||||||||||||||||||| ||| || ||||||||||||||||||||    
T  46405533 aatgattgtttaataaattggattttgatggattttgtgg----------tgtaattttaacaagaaaaagtatttaataaaaagatgagatttcttgag 46405444  T
Q  201 attgtttttattttaaaagttactatctttttcttctc 238  Q
    ||||||||| |||||||||||||||||| ||| |||||    
T  46405443 attgtttttcttttaaaagttactatctcttttttctc 46405406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 10068464 - 10068682
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtctt-gaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttc 99  Q
    ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||| || ||       ||||||||||||||||||||||||||||||     
T  10068464 tcaagactctttgccattttaaaaaagtctttgaggtattcaatcaagatttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttt 10068563  T
Q  100 gaaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttga 199  Q
    |||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||| || |||||||| |||||| |||| ||||||||| ||      
T  10068564 gaaggattgtttaataaattaaattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtatttcataaaaacatgagatttgttag 10068663  T
Q  200 gattgtttttattttaaaa 218  Q
    |||||||||| ||||||||    
T  10068664 gattgtttttcttttaaaa 10068682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 41827312 - 41827539
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||||| ||||||||||||||||| ||||||||| ||||||||||| ||||||  | ||       |||||||||||||||||||          | |    
T  41827312 tcaagactttttgtcattttaaaaaaatcttgaggtgttcaatcaagacttttcataacttaaaaaaagtcttgtggtattcaaaat----------ttg 41827401  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    |||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||| |||||||||||||||    
T  41827402 aaggattgtttaataaattggattttgatggattttgtgggattgtgtagtgtaattttaacaagaaaatgtctttcatgaaaatatgagatttcttgag 41827501  T
Q  201 attgtttttattttaaaagttactatctttttcttctc 238  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  41827502 attgtttttcttttaaaagttactatctctttcttctc 41827539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 89 - 238
Target Start/End: Complemental strand, 37972981 - 37972832
Alignment:
Q  89 attcaaatttcgaaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatg 188  Q
    ||||||||||||||||||| |||||||||||| |||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||    
T  37972981 attcaaatttcgaaggattatttaataaattggattttgatggattttgcgggattttatagtgtaattttaacaagaaaaagtctttcatgaaaagatg 37972882  T
Q  189 agatttcttgagattgtttttattttaaaagttactatctttttcttctc 238  Q
    ||| ||||||||||||||||| |||||||||||| ||||| |||||||||    
T  37972881 agacttcttgagattgtttttcttttaaaagttattatctctttcttctc 37972832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 39028095 - 39028322
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||| |||||| || ||       |||||||| ||||||||||| |||||||| ||    
T  39028095 tcaagactctttgtcattttaaaaaagtcttgagatattcaatcaagacttttcatcacttaaaaaaagtcttgtgttattcaaaatcgttcaaattacg 39028194  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    || ||||||||||||||||| ||||||||||||          |||||||||||| |||||||||||||||| |||||||||||   |||||||||||||    
T  39028195 aaagattgtttaataaattggattttgatggat----------tttgtagtgtaactttaacaagaaaaagtttttcatgaaaaacagagatttcttgag 39028284  T
Q  201 attgtttttattttaaaagttactatctttttcttctc 238  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  39028285 attgtttttcttttaaaagttactatctctttcttctc 39028322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 29585513 - 29585739
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| | |||| | || ||       ||||| |||||||||||||||||||||||| |    
T  29585513 tcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaaaactttt-atcacttaaaaaaagtcttctggtattcaaaatcattcaaattttg 29585611  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    |||||||||||||||| ||| ||||||||||||          |||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  29585612 aaggattgtttaataatttggattttgatggat----------tttgtagtgtaattttaacaagaaaaagtctttcataaaaagatgaaatttcttgag 29585701  T
Q  201 attgtttttattttaaaagttactatctttttcttctc 238  Q
    ||||||||| |||||||||||||| | | |||||||||    
T  29585702 attgtttttcttttaaaagttactgtatctttcttctc 29585739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 12963699 - 12963911
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||  | ||       |||| ||||||| |||||||||||||||||||    
T  12963699 tcaagactctttgtcattttaaaaaagtcttgagatattcaatcaagatttttcattacttaaaaaaagtctcgtggtatccaaaatcattcaaatttcg 12963798  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    |||||||||||||||||||  ||||||||||||||||||||||||| ||||| |||||||  ||||||||||||||  |      |||||||||||||||    
T  12963799 aaggattgtttaataaattagattttgatggattttgtgggattttctagtgaaattttagtaagaaaaagtctttttt-----catgagatttcttgag 12963893  T
Q  201 attgtttttattttaaaa 218  Q
    ||||||||| ||||||||    
T  12963894 attgtttttcttttaaaa 12963911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 32883780 - 32884002
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||||| |||||||||||||||||||||||| ||||||||| |||| |||||| || ||       ||||||||||||||||||||||||||||||||    
T  32883780 tcaagactttttgtcattttaaaaaagtcttgaagtattcaattaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcg 32883879  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    || ||||||||| ||||||| |||||||||||||| ||||||||||||||||||||||||||||               ||||||||||||||| |||||    
T  32883880 aatgattgtttattaaattggattttgatggatttcgtgggattttgtagtgtaattttaacaa---------------gaaaagatgagatttattgag 32883964  T
Q  201 attgtttttattttaaaagttactatctttttcttctc 238  Q
    ||||||||| |||||||||||||||| | |||||||||    
T  32883965 attgtttttcttttaaaagttactatttgtttcttctc 32884002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 973189 - 973397
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||| |||||||||||| |||||||||||| ||||||||||||||| | || | || ||        | | |||||||||||||||||||||||||||    
T  973189 tcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaatttagtggtattcaaaatcattcaaatttcg 973288  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    ||||||||||||||||||   ||||||||||||||||||||||||| ||||| ||||||| ||||||||||||||||||||||| ||||||||||||  |    
T  973289 aaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttagg 973388  T
Q  201 attgttttt 209  Q
    |||||||||    
T  973389 attgttttt 973397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 47914271 - 47914479
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||| |||||||||||| ||||||||| || ||||||||||||||| | || | || ||       |||| ||| |||||||||||||||||||||||    
T  47914271 tcaagattctttgtcatttaaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtgatattcaaaatcattcaaatttcg 47914370  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    ||||||||||||||||||   ||||||||||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| |||||||||||| ||    
T  47914371 aaggattgtttaataaataagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaag 47914470  T
Q  201 attgttttt 209  Q
    |||||||||    
T  47914471 attgttttt 47914479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 40996851 - 40996643
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||| |||||||||||| |||||||||||| ||||||||||||||| | || | |  ||       |||| |||||||||||||||||||||||||||    
T  40996851 tcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcgcttaaaaaaagtctagtggtattcaaaatcattcaaatttcg 40996752  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    ||||||||||||||||||   ||||||||||||||||| ||||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||  |    
T  40996751 aaggattgtttaataaatcagattttgatggattttgtaggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttagg 40996652  T
Q  201 attgttttt 209  Q
    |||||||||    
T  40996651 attgttttt 40996643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 1 - 197
Target Start/End: Complemental strand, 43581292 - 43581096
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||| |||||||||||| ||||||||||||  |||||||||||||| | || | || ||       |||| |||||||||||||||||||||||||||    
T  43581292 tcaagattctttgtcatttaaaaaaagtcttgttgtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcg 43581193  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 197  Q
    ||||||||||||||||||   ||||||||||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||    
T  43581192 aaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 43581096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 30440801 - 30441009
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||| |||||||||||| |||||| ||||| ||||||||||||||| | || | || ||       |||| |||||||||||||||||||||||||||    
T  30440801 tcaagattctttgtcatttaaaaaaaatcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcg 30440900  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    ||||||||||||||||||   ||||||||||||||||||||||||| ||||| |||||||  | ||||||||||||| |||||| ||||||||||||  |    
T  30440901 aaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagtatgaaaaagtctttcgtgaaaacatgagatttcttagg 30441000  T
Q  201 attgttttt 209  Q
    |||||||||    
T  30441001 attgttttt 30441009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 10 - 209
Target Start/End: Complemental strand, 7719453 - 7719254
Alignment:
Q  10 tttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgt 109  Q
    |||||||||| |||||||||||| ||||||||||||||| | || | || ||        ||| ||||||||||||||||||||||||||||| ||||||    
T  7719453 tttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaatctagtggtattcaaaatcattcaaatttcgaatgattgt 7719354  T
Q  110 ttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 209  Q
    |||||||||   ||||||||||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||  ||||||||||    
T  7719353 ttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgttttt 7719254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 33892452 - 33892212
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||| |||||| || ||       ||||||||||||||||||||||||||||||||    
T  33892452 tcaacactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaacaaagtcttgtggtattcaaaatcattcaaatttcg 33892353  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaag-------------at 187  Q
    || ||||||| ||||||||| ||||| ||          | |||||||||||||||||||||||||||||||||||||| |||||             ||    
T  33892352 aatgattgttaaataaattggatttttat----------gaattttgtagtgtaattttaacaagaaaaagtctttcattaaaagatgagattttttaat 33892263  T
Q  188 gagatttcttgagattgtttttattttaaaagttactatctttttcttctc 238  Q
    |||||||||||||||| ||||| |||||||||||||||||| |||||||||    
T  33892262 gagatttcttgagattatttttcttttaaaagttactatctctttcttctc 33892212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 75 - 221
Target Start/End: Complemental strand, 43187485 - 43187339
Alignment:
Q  75 tggtattcaaaatcattcaaatttcgaaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtct 174  Q
    |||||||||||||||||||||||| |||| |||||||||||||||| ||||||||| ||||||| ||||||| ||||| |||||||||||||||||||||    
T  43187485 tggtattcaaaatcattcaaattttgaagcattgtttaataaattggattttgatgaattttgtcggattttctagtgaaattttaacaagaaaaagtct 43187386  T
Q  175 ttcatgaaaagatgagatttcttgagattgtttttattttaaaagtt 221  Q
    |||||||| | ||||||||| ||| |||||||||| |||||||||||    
T  43187385 ttcatgaagacatgagattttttgggattgtttttcttttaaaagtt 43187339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 16 - 209
Target Start/End: Complemental strand, 7718549 - 7718356
Alignment:
Q  16 attttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaata 115  Q
    |||| |||||||||||| ||||||||||||||| | || | || ||       |||| ||||||||||||||||||||||||||||||||||||||||||    
T  7718549 atttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaata 7718450  T
Q  116 aattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 209  Q
    |||   ||||||||||||||||||||||||| ||||| ||||||| || |||||| ||||||||||||| ||||||||||||  ||||||||||    
T  7718449 aatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaaatctttcatgaaaacatgagatttcttaggattgttttt 7718356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 8 - 209
Target Start/End: Complemental strand, 18914930 - 18914729
Alignment:
Q  8 tctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggatt 107  Q
    |||||||| ||| |||||||||||| ||||||||||||||| | || | || ||       |||| |||||||||||||||||||||||||| |||| ||    
T  18914930 tctttgtcctttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcaaaggttt 18914831  T
Q  108 gtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgttt 207  Q
    |||||||||||   ||||||||||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||  ||||||||    
T  18914830 gtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgttt 18914731  T
Q  208 tt 209  Q
    ||    
T  18914730 tt 18914729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 12893413 - 12893621
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||| |||||||||||| |||||||||||| |||||| |||||||| | || | || ||       ||||  ||||||||||||||||||||||||||    
T  12893413 tcaagattctttgtcatttaaaaaaagtcttgtggtatttaatcaagactcttaatcacttaaaaaaagtctaatggtattcaaaatcattcaaatttcg 12893512  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    ||| ||||||||||||||   |||||||||||||||||| |||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||  |    
T  12893513 aagaattgtttaataaatcagattttgatggattttgtgagattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttagg 12893612  T
Q  201 attgttttt 209  Q
    |||||||||    
T  12893613 attgttttt 12893621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 34695278 - 34695486
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||| || ||||||||| |||||||| ||| ||||||||||||||| | || | || ||       |||  ||||||||||||| |||||||||||||    
T  34695278 tcaagattccttgtcatttaaaaaaagttttgtggtattcaatcaagactcttaatcacttaaaaaaagtccagtggtattcaaaaccattcaaatttcg 34695377  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    ||||||||||||||||||   ||||||||||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||  |    
T  34695378 aaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttagg 34695477  T
Q  201 attgttttt 209  Q
    |||||||||    
T  34695478 attgttttt 34695486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 44343598 - 44343390
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||| |||||||||||| |||||||||||| | ||||||||||||| | || | || ||       || | |||||||| ||||||||||||||||||    
T  44343598 tcaagattctttgtcatttaaaaaaagtcttgtgatattcaatcaagactcttaatcacttaaaaaaagtttagtggtatttaaaatcattcaaatttcg 44343499  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    ||||||||||||||||||   ||||||||||||||||||||||||| ||||| ||||||| || |||||||||||||| ||||| ||||||||||||  |    
T  44343498 aaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcacgaaaacatgagatttcttagg 44343399  T
Q  201 attgttttt 209  Q
    |||||||||    
T  44343398 attgttttt 44343390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 47879173 - 47879381
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||| |||||||||||| ||||||||| || ||||||||||||||| | || | || ||       |||| ||| |||||||||||||||||||||      
T  47879173 tcaagattctttgtcatttaaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtgatattcaaaatcattcaaatttaa 47879272  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    ||||||||||||||||||   ||||||||||||||||||| ||||| ||||| ||||||| || |||||||||||||||||||| |||||||||||| ||    
T  47879273 aaggattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaag 47879372  T
Q  201 attgttttt 209  Q
    |||||||||    
T  47879373 attgttttt 47879381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 19251537 - 19251672
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||| || ||       |||| |||||||||||||||||||||||||||    
T  19251537 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaaatttttcatcacttaaaaaaagtctcgtggtattcaaaatcattcaaatttcg 19251636  T
Q  101 aaggattgtttaataaattgaattttgatggatttt 136  Q
    |||||||||||||||||||| |||||||||||||||    
T  19251637 aaggattgtttaataaattggattttgatggatttt 19251672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 197
Target Start/End: Complemental strand, 20275465 - 20275269
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||| || ||||||||| |||||||||||  ||||||||||||||| | || | || ||       ||||| ||||||||||||||||||||||||||    
T  20275465 tcaagattccttgtcatttaaaaaaagtcttatggtattcaatcaagactcttaatcacttaaaaaaagtcttatggtattcaaaatcattcaaatttcg 20275366  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 197  Q
    ||||||||||||||||||   ||||||||||||||||||||||||| ||||| ||||||| || |||||||||| ||||||||  ||||||||||||    
T  20275365 aaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaaaagtctgtcatgaaagcatgagatttctt 20275269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 74 - 209
Target Start/End: Complemental strand, 32143046 - 32142911
Alignment:
Q  74 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtc 173  Q
    ||||||||||||||||||||||||| |||||||||||||||||||   ||||||||||||||||||||||||| ||||| ||||||| || |||||||||    
T  32143046 gtggtattcaaaatcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 32142947  T
Q  174 tttcatgaaaagatgagatttcttgagattgttttt 209  Q
    || ||| |||| |||||||||||| |||||||||||    
T  32142946 ttccataaaaacatgagatttcttaagattgttttt 32142911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 3797259 - 3797052
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||| || ||       |||||||||||||||| |||||| |||||| |    
T  3797259 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaagatcattaaaattttg 3797160  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    |||||||||||||||||||  |||||||         ||||||||| ||||| ||||||| || |||||||||||| | ||||| || |||||||||  |    
T  3797159 aaggattgtttaataaattagattttga---------tgggattttctagtgaaattttagcatgaaaaagtcttttaagaaaacat-agatttcttagg 3797070  T
Q  201 attgtttttattttaaaa 218  Q
    ||||||||| ||||||||    
T  3797069 attgtttttcttttaaaa 3797052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 17001225 - 17001037
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||||||||||||||||| |||||||||||||||||||||| |||| |||||| || ||        | | |||||||||||||||||||||||||||    
T  17001225 tcaagactctttgtcatttttaaaaagtcttgaggtattcaataaagacttttcatcacttaaaaaaaatatcgtggtattcaaaatcattcaaatttcg 17001126  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    ||||||||||||||||||||                    ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||     
T  17001125 aaggattgtttaataaattg--------------------gattttgtagtgtaattataacaagaaaaagtctttcatgaaaatatgagatttcttgat 17001046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 34009017 - 34009226
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtctt-gtggtattcaaaatcattcaaatttc 99  Q
    |||||| | |||||||||| |||||||||||| ||||||||||||| | | || | || ||       ||| | ||||||||||||||||||||||||||    
T  34009017 tcaagattatttgtcatttaaaaaaagtcttgtggtattcaatcaacactcttaatcacttaaaaaaagtcctagtggtattcaaaatcattcaaatttc 34009116  T
Q  100 gaaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttga 199  Q
    |||||||||||||||||||   ||||||||||||||||||| ||||| || |  ||||||| ||  ||||||||||||| ||||| ||||||||||||      
T  34009117 gaaggattgtttaataaatcagattttgatggattttgtggaattttctaataaaattttagcataaaaaagtctttcaagaaaacatgagatttcttag 34009216  T
Q  200 gattgttttt 209  Q
    ||||||||||    
T  34009217 gattgttttt 34009226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 75 - 209
Target Start/End: Complemental strand, 39219504 - 39219371
Alignment:
Q  75 tggtattcaaaatcattcaaatttcgaaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtct 174  Q
    |||||||||||||||||||||||| || | ||||||||||||||   ||||||||||||||||||||||||| ||||| ||||||| || ||||||||||    
T  39219504 tggtattcaaaatcattcaaattttgatg-attgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtct 39219406  T
Q  175 ttcatgaaaagatgagatttcttgagattgttttt 209  Q
    ||||| |||| ||||||||||||  ||||||||||    
T  39219405 ttcataaaaacatgagatttcttaggattgttttt 39219371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 74 - 174
Target Start/End: Original strand, 43679492 - 43679592
Alignment:
Q  74 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtc 173  Q
    |||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||| ||||| ||||||| || |||||||||    
T  43679492 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 43679591  T
Q  174 t 174  Q
    |    
T  43679592 t 43679592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 74 - 209
Target Start/End: Original strand, 7113530 - 7113665
Alignment:
Q  74 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtc 173  Q
    |||||||||||||| |||||||||||| |||||||||||||||||   |||||||| |||||||||||||||| |||   ||||||| || |||||||||    
T  7113530 gtggtattcaaaataattcaaatttcgcaggattgtttaataaatcagattttgatagattttgtgggattttctaggaaaattttagcatgaaaaagtc 7113629  T
Q  174 tttcatgaaaagatgagatttcttgagattgttttt 209  Q
    ||||||||||| |||| |||||||  ||||||||||    
T  7113630 tttcatgaaaacatgaaatttcttaggattgttttt 7113665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 25805690 - 25805862
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||| ||||||| |||| |||||| ||| | ||||||||||||| |||||||| || ||          |||||||||||||||||||||||||||||    
T  25805690 tcaagattctttgtaatttaaaaaaaatctagtggtattcaatcaaaatttttcatcacttaaaaaaaaatttgtggtattcaaaatcattcaaatttcg 25805789  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtc 173  Q
     ||||||||||||||||||||||| ||||||||||||||||||||| || |  ||||||| || |||||||||    
T  25805790 taggattgtttaataaattgaattatgatggattttgtgggattttctaataaaattttagcatgaaaaagtc 25805862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 47066701 - 47066881
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnn-gtcttgtggtattcaaaatcattcaaatttc 99  Q
    |||| |||||||||||||||||||||||||||| |||||||||||| |  ||||| || ||        |||||||||||||||||||||||||||||||    
T  47066701 tcaaaactctttgtcattttaaaaaagtcttgacgtattcaatcaaaaaatttcatcacttaaaaaaaagtcttgtggtattcaaaatcattcaaatttc 47066800  T
Q  100 gaaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttga 199  Q
    ||||||||||||||||||||                    ||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||    
T  47066801 gaaggattgtttaataaatt--------------------ggattttgtagtgtaattttaacaagaaaaaatatttcatgaaaagatgagatttcttga 47066880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 10676622 - 10676460
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||||||||||  |||| ||||| |||||| ||||||||||||||| |||||| || ||       ||||  | ||||||||||||||||||||||||    
T  10676622 tcaagactctttgcaatttaaaaaaggtcttgtggtattcaatcaagacttttcatcacttaaaaaaagtctcattgtattcaaaatcattcaaatttcg 10676523  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaaca 163  Q
    |||||||||||||||||||| |||| |||||||||| ||| ||||| | ||| ||||||||||    
T  10676522 aaggattgtttaataaattggatttggatggattttatggaattttcttgtgaaattttaaca 10676460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 9179878 - 9180076
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||| |||||||||||| |||||||| |||  |||||||||||||| | |||| || ||       |||||||||||| |||||||| | ||||| ||    
T  9179878 tcaagattctttgtcatttaaaaaaagttttgtcgtattcaatcaagactcttcatcacttaaaaaaagtcttgtggtatacaaaatcacttaaattccg 9179977  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    ||||||||||||||||||||          |||||||||||||||| ||||| | ||||| ||  ||||||||||||||||||| ||||||||||||  |    
T  9179978 aaggattgtttaataaattg----------gattttgtgggattttctagtgaatttttagcataaaaaagtctttcatgaaaacatgagatttcttagg 9180067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 78 - 210
Target Start/End: Original strand, 19810874 - 19810996
Alignment:
Q  78 tattcaaaatcattcaaatttcgaaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttc 177  Q
    |||||||||||||||||||||| || |||||||||||||||||          |||||||||| ||||| ||||| ||||||| ||  |||| |||||||    
T  19810874 tattcaaaatcattcaaatttcaaatgattgtttaataaattg----------gattttgtggaattttctagtgaaattttagcataaaaatgtctttc 19810963  T
Q  178 atgaaaagatgagatttcttgagattgttttta 210  Q
    ||||||| |||||||||||||||||||||||||    
T  19810964 atgaaaacatgagatttcttgagattgttttta 19810996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 44623478 - 44623352
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    ||||||||||||||||||| |||||||||||| |||||| |||||||| | |||| || ||       |||| ||| |||||||||||||||| |||||     
T  44623478 tcaagactctttgtcatttaaaaaaagtcttgtggtatttaatcaagactcttcatcactttaaaaaggtctcgtgatattcaaaatcattcatatttct 44623379  T
Q  101 aaggattgtttaataaattgaattttg 127  Q
    || || |||||||||||||||||||||    
T  44623378 aaagactgtttaataaattgaattttg 44623352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 69 - 136
Target Start/End: Original strand, 31638948 - 31639015
Alignment:
Q  69 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgaattttgatggatttt 136  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||    
T  31638948 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggatttt 31639015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 72 - 133
Target Start/End: Original strand, 447852 - 447913
Alignment:
Q  72 ttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgaattttgatggat 133  Q
    |||||||||| |||||||||||||||||||| ||||||||||| ||||| ||||||||||||    
T  447852 ttgtggtatttaaaatcattcaaatttcgaatgattgtttaattaattggattttgatggat 447913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 29893079 - 29893177
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttc 99  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||| |||||| || ||       ||||||| ||||| ||||| |||||||||||    
T  29893079 tcaagactctttgtcattttaaaacagtcatgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtagtatttaaaataattcaaatttc 29893177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 77 - 184
Target Start/End: Original strand, 727594 - 727691
Alignment:
Q  77 gtattcaaaatcattcaaatttcgaaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtcttt 176  Q
    ||||||||||||||||||||||| ||||||||||||||||||            |||||||||||||||| ||||| ||||||| || ||||||||||||    
T  727594 gtattcaaaatcattcaaatttcaaaggattgtttaataaat----------cagattttgtgggattttctagtgaaattttagcatgaaaaagtcttt 727683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 191 - 238
Target Start/End: Original strand, 29893173 - 29893220
Alignment:
Q  191 atttcttgagattgtttttattttaaaagttactatctttttcttctc 238  Q
    ||||||||||||||||||| |||||||||||||||||| |||||||||    
T  29893173 atttcttgagattgtttttcttttaaaagttactatctctttcttctc 29893220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 48117795 - 48117748
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 48  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||    
T  48117795 tcaagactctttgtcatttttgaaaagtcttgaggtattcaatcaaga 48117748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 146
Target Start/End: Complemental strand, 1470432 - 1470291
Alignment:
Q  3 aagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaa 102  Q
    |||||| |||||||||| |||||||||||| | ||||||||  | | |||||| |||||       || ||||||||||||||||| |||||||||  ||    
T  1470432 aagactatttgtcatttaaaaaaagtcttgtgatattcaatataaacttttcatcatttaaaaaa-gtattgtggtattcaaaatcgttcaaattttaaa 1470334  T
Q  103 ggattgtttaataaattgaattttgatggattttgtgggatttt 146  Q
    | |||||||||| ||||  |||||||| | ||||||||||||||    
T  1470333 gcattgtttaatgaattagattttgatag-ttttgtgggatttt 1470291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 52
Target Start/End: Original strand, 10616955 - 10616997
Alignment:
Q  10 tttgtcattttaaaaaagtcttgaggtattcaatcaagatttt 52  Q
    ||||||||||| ||||||||||||||||||| |||||||||||    
T  10616955 tttgtcatttttaaaaagtcttgaggtattcgatcaagatttt 10616997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 109 - 218
Target Start/End: Original strand, 10617024 - 10617134
Alignment:
Q  109 tttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat-gagatttcttgagattgttt 207  Q
    |||||||||||  |||||||||||||||||| |||||| |||||  ||||||  || || ||||||||||| |||| ||  |||||| ||| ||||| ||    
T  10617024 tttaataaattagattttgatggattttgtgagattttctagtgatattttagtaataacaagtctttcataaaaacataaagattttttgggattgctt 10617123  T
Q  208 ttattttaaaa 218  Q
    || ||||||||    
T  10617124 ttcttttaaaa 10617134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 53
Target Start/End: Complemental strand, 27418680 - 27418644
Alignment:
Q  17 ttttaaaaaagtcttgaggtattcaatcaagattttt 53  Q
    ||||| |||||||||| ||||||||||||||||||||    
T  27418680 ttttataaaagtcttgtggtattcaatcaagattttt 27418644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 52
Target Start/End: Original strand, 32630687 - 32630719
Alignment:
Q  20 taaaaaagtcttgaggtattcaatcaagatttt 52  Q
    ||||||| |||||||||||||||||||||||||    
T  32630687 taaaaaaatcttgaggtattcaatcaagatttt 32630719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 53
Target Start/End: Original strand, 40097140 - 40097176
Alignment:
Q  17 ttttaaaaaagtcttgaggtattcaatcaagattttt 53  Q
    ||||||||||||||| |||||||||||||||| ||||    
T  40097140 ttttaaaaaagtctttaggtattcaatcaagactttt 40097176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 204; Significance: 1e-111; HSPs: 55)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 3 - 239
Target Start/End: Original strand, 6312573 - 6312809
Alignment:
Q  3 aagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaa 102  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||       ||||||||||||||||||||||||||||||||||    
T  6312573 aagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaa 6312672  T
Q  103 ggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagat 202  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6312673 ggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagat 6312772  T
Q  203 tgtttttattttaaaagttactatctttttcttctca 239  Q
    |||||||||||||||||||||||||||||||||||||    
T  6312773 tgtttttattttaaaagttactatctttttcttctca 6312809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 25612154 - 25612392
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||       |||||||||||||||||||||||||||||||     
T  25612154 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttca 25612253  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  25612254 aaggattgtttaataaattggattttgatggattttgtgggattttgtagtataattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 25612353  T
Q  201 attgtttttattttaaaagttactatctttttcttctca 239  Q
    |||||||||||||||||||||||||||||||||||||||    
T  25612354 attgtttttattttaaaagttactatctttttcttctca 25612392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 51701577 - 51701815
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||       ||||||||||||||||||||||||||||||||    
T  51701577 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcg 51701676  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  51701677 aaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagattttttgag 51701776  T
Q  201 attgtttttattttaaaagttactatctttttcttctca 239  Q
    |||||||||||||||||||||||||||||||||||||||    
T  51701777 attgtttttattttaaaagttactatctttttcttctca 51701815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 1 - 234
Target Start/End: Complemental strand, 29396591 - 29396358
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||       ||||||||||||||||||||||||||||||||    
T  29396591 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcg 29396492  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29396491 aaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 29396392  T
Q  201 attgtttttattttaaaagttactatctttttct 234  Q
    ||||||||| |||||||||||||||||| |||||    
T  29396391 attgtttttgttttaaaagttactatctctttct 29396358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 9322703 - 9322466
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||| |||||| |||||       ||| |||||||||||||||||||||||||| |    
T  9322703 tcaagactctttgtcattttaaaaaagtcttgaggtattcgatcaagacttttcatcatttaaaaaaagtcctgtggtattcaaaatcattcaaatttag 9322604  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9322603 aaggattgtttaataaattgaattttgatggattttatgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 9322504  T
Q  201 attgtttttattttaaaagttactatctttttcttctc 238  Q
    |||||||||||||||||| |||||||||||||||||||    
T  9322503 attgtttttattttaaaatttactatctttttcttctc 9322466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 173; E-Value: 5e-93
Query Start/End: Original strand, 1 - 234
Target Start/End: Complemental strand, 15835256 - 15835023
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| || ||| |||||        |||||||||||||||||||||||||||| |     
T  15835256 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttctcatcatttaaaaaaaatcttgtggtattcaaaatcattcaaattgca 15835157  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15835156 aaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 15835057  T
Q  201 attgtttttattttaaaagttactatctttttct 234  Q
    ||||||||| |||||||||||||||||| |||||    
T  15835056 attgtttttgttttaaaagttactatctctttct 15835023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 171; E-Value: 7e-92
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 48177665 - 48177442
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| |||||||| || ||       ||||||||||||||||||||||||||||||||    
T  48177665 tcaatactctttgtcattttaaaaaagtcttgaggtattcaatcaaaatttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcg 48177566  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    || ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48177565 aatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 48177466  T
Q  201 attgtttttattttaaaagttact 224  Q
    ||||||||| ||||||||| ||||    
T  48177465 attgtttttcttttaaaagatact 48177442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 28387596 - 28387359
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||| |||||| |||||        |||||||||||||||| ||||||||||||||    
T  28387596 tcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaaatcttgtggtattcaaattcattcaaatttcg 28387497  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||| |||||||||||||| ||||||||||||||||||||    
T  28387496 aaggattgtttaataaattggattttgatggattttgtgggattttgtagtttaattttaacaaaaaaaagtctttcataaaaagatgagatttcttgag 28387397  T
Q  201 attgtttttattttaaaagttactatctttttcttctc 238  Q
    ||||||||| |||||||||||| ||||| |||||||||    
T  28387396 attgtttttgttttaaaagttattatctctttcttctc 28387359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 46328039 - 46328276
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||| || ||       |||| |||||||||||||||||||||||||||    
T  46328039 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttacaaaaagtctcgtggtattcaaaatcattcaaatttcg 46328138  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    |||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| ||     
T  46328139 aaggattgtttaattaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcataaaaagataagatttctcgaa 46328238  T
Q  201 attgtttttattttaaaagttactatctttttcttctc 238  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  46328239 attgtttttcttttaaaagttactatctctttcttctc 46328276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 38536292 - 38536065
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||| ||||||  | ||       ||||||||||||||||||| |||||||||||     
T  38536292 tcaagactctttgtcattttaaaaaagttttgaggtattcaatcaagacttttcattacttaacaaaagtcttgtggtattcaaaattattcaaatttca 38536193  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    |||||||||||||||||||| |||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38536192 aaggattgtttaataaattggattttgatggattttgt----------agtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 38536103  T
Q  201 attgtttttattttaaaagttactatctttttcttctc 238  Q
    ||||||||| ||||||||||||| |||| | |||||||    
T  38536102 attgtttttcttttaaaagttacaatctctctcttctc 38536065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 38558510 - 38558283
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||| ||||||  | ||       ||||||||||||||||||| |||||||||||     
T  38558510 tcaagactctttgtcattttaaaaaagttttgaggtattcaatcaagacttttcattacttaacaaaagtcttgtggtattcaaaattattcaaatttca 38558411  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    |||||||||||||||||||| |||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38558410 aaggattgtttaataaattggattttgatggattttgt----------agtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 38558321  T
Q  201 attgtttttattttaaaagttactatctttttcttctc 238  Q
    ||||||||| ||||||||||||| |||| | |||||||    
T  38558320 attgtttttcttttaaaagttacaatctctctcttctc 38558283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 18798488 - 18798691
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||       ||||||||||||||||||||||||||||||||    
T  18798488 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcg 18798587  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    |||||||||||||||||||                    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  18798588 aaggattgtttaataaatt--------------------ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctagag 18798667  T
Q  201 attgtttttattttaaaagttact 224  Q
    ||||||||| ||||||||||||||    
T  18798668 attgtttttgttttaaaagttact 18798691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 12 - 221
Target Start/End: Original strand, 29219294 - 29219493
Alignment:
Q  12 tgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgttt 111  Q
    ||||||||||||||||||||||| ||||||||||||| |||||| || ||       |||||||||||||||||||||||||||||  ||||||||||||    
T  29219294 tgtcattttaaaaaagtcttgagatattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaattaagaaggattgttt 29219393  T
Q  112 aataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttat 211  Q
    ||||||||| ||||||||||||          ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |    
T  29219394 aataaattggattttgatggat----------tttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgagatttcttgagattgtttttct 29219483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 9577635 - 9577418
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    ||||||| |||||||||||||||||||||||||| |||| |||||| | |||| | || ||       |||||||| ||||||||||||||||||||| |    
T  9577635 tcaagaccctttgtcattttaaaaaagtcttgagatattaaatcaaaactttttatcacttaaaaaaagtcttgtgatattcaaaatcattcaaatttag 9577536  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    |||||||||||||||||||| |||||||||||||||||| |||||| ||||| |||||||  | |||||| ||||||||||||| ||||||||||||| |    
T  9577535 aaggattgtttaataaattggattttgatggattttgtgagattttctagtgaaattttagaatgaaaaaatctttcatgaaaacatgagatttcttggg 9577436  T
Q  201 attgtttttattttaaaa 218  Q
    ||||||||| ||||||||    
T  9577435 attgtttttcttttaaaa 9577418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 21222144 - 21222349
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||| |||||||||||| |||||||||||| ||||||||||||||| | || | || ||       |||| | |||||||||||||||||||||||||    
T  21222144 tcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagaggtattcaaaatcattcaaatttcg 21222243  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    ||||||||||||||||||   ||||||||||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||  |    
T  21222244 aaggattgtttaataaataagattttgatggattttgtgggattttttagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttagg 21222343  T
Q  201 attgtt 206  Q
    ||||||    
T  21222344 attgtt 21222349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 48668975 - 48668770
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||||||||||||||||||||||||| ||||||||||||||||   ||||||| || ||       |||  |||||||||||||| ||||||||||||    
T  48668975 tcaagactctttgtcattttaaaaaagttttgaggtattcaatca---tttttcatcacttaaaaaaagtcacgtggtattcaaaattattcaaatttcg 48668879  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    || |||||||||||||||||          |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||| |    
T  48668878 aaagattgtttaataaattg----------gattttgtgggattctgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttgttggg 48668789  T
Q  201 attgtttttattttaaaag 219  Q
    ||||||||| |||||||||    
T  48668788 attgtttttcttttaaaag 48668770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 19452011 - 19451803
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||| |||||||||||| |||||||||||| |||||| |||||||| | || | || ||       |||| |||||||||||||||||||||||||||    
T  19452011 tcaagattctttgtcatttaaaaaaagtcttgtggtatttaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcg 19451912  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    |||||| |||||||||||   ||||||||||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||  |    
T  19451911 aaggatcgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttatg 19451812  T
Q  201 attgttttt 209  Q
    |||||||||    
T  19451811 attgttttt 19451803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 1 - 197
Target Start/End: Original strand, 35279669 - 35279865
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||| |||||||||||| |||||||||||| ||||||||||||||| | || | || ||       |||| |||||||||||||||||| ||||||||    
T  35279669 tcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactattaatcacttaaaaaaagtctagtggtattcaaaatcatttaaatttcg 35279768  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 197  Q
    ||||||||||||||||||   ||||||||||||||||||||||||| ||||| ||||| |||| |||||||||||||||||||| ||||||||||||    
T  35279769 aaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaatttcaacatgaaaaagtctttcatgaaaacatgagatttctt 35279865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 3 - 209
Target Start/End: Complemental strand, 37014841 - 37014635
Alignment:
Q  3 aagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaa 102  Q
    |||||||||||||||||  || |||||||| ||||||||||||| ||| |||| || ||       |||||||| |||||||||||||||||||||| ||    
T  37014841 aagactctttgtcatttagaagaagtcttgtggtattcaatcaatattcttcatcacttaaaaaaagtcttgtgatattcaaaatcattcaaatttctaa 37014742  T
Q  103 ggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagat 202  Q
     |||||||| |||||||||||||||||||||||||| ||||||| ||||| ||||||| || |||||||||| |||| |||| |||||||||||| ||||    
T  37014741 agattgttttataaattgaattttgatggattttgtcggattttctagtgaaattttagcatgaaaaagtctctcataaaaacatgagatttcttaagat 37014642  T
Q  203 tgttttt 209  Q
    |||||||    
T  37014641 tgttttt 37014635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 45272584 - 45272809
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||| |||||||||||||||||||| |||||||||||||||||||||| |||||| || ||        ||| |||||||||||||| ||| ||||||||    
T  45272584 tcaaaactctttgtcattttaaaaa-gtcttgaggtattcaatcaagacttttcatcacttaaaaaaaatctcgtggtattcaaaattatttaaatttcg 45272682  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    |||||| |||||||||||||          ||||||||| |||||||||||||||||||||||||||||| ||||| || |||||||||||||| |||||    
T  45272683 aaggat-gtttaataaattg----------gattttgtgagattttgtagtgtaattttaacaagaaaaaatcttttataaaaagatgagattttttgag 45272771  T
Q  201 attgtttttattttaaaagttactatctttttcttctc 238  Q
    ||||||||| |||||||||||| ||||| |||||||||    
T  45272772 attgtttttcttttaaaagttattatctgtttcttctc 45272809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 3 - 193
Target Start/End: Complemental strand, 5495297 - 5495117
Alignment:
Q  3 aagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaa 102  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||| || ||       |||| |||||||||||||||||| ||||||| ||    
T  5495297 aagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtctcgtggtattcaaaatcatttaaatttcaaa 5495198  T
Q  103 ggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatt 193  Q
    ||||| ||||||||||||          ||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||    
T  5495197 ggattatttaataaattg----------gattttgtgggattttgtagtgtaattttaacaagaaaaagtcctttatgaaaagatgagatt 5495117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 50192754 - 50192545
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnn-gtcttgtggtattcaaaatcattcaaatttc 99  Q
    |||||| || |||||||||||||||||||||| ||||||||||||||| | || | || ||        |||| |||||||||||||||||||||||||     
T  50192754 tcaagattccttgtcattttaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaagtctagtggtattcaaaatcattcaaatttt 50192655  T
Q  100 gaaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttga 199  Q
    |||||||||||||||||||   ||||||||||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| ||||||||| ||      
T  50192654 gaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagattttttag 50192555  T
Q  200 gattgttttt 209  Q
    ||||||||||    
T  50192554 gattgttttt 50192545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 28824575 - 28824368
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||| | |||||||||| |||||||||||| ||||||||||||||| | || | || ||       ||||||||||||||||||||||||||||||||    
T  28824575 tcaagattatttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaacagtcttgtggtattcaaaatcattcaaatttcg 28824476  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    ||| ||||||||||||||   ||||||||||||||||||||||||| ||| | |||||||||| |||||||||||| || |||| ||||||||||||  |    
T  28824475 aag-attgtttaataaatcagattttgatggattttgtgggattttctagggaaattttaacatgaaaaagtcttttataaaaacatgagatttcttagg 28824377  T
Q  201 attgttttt 209  Q
    |||||||||    
T  28824376 attgttttt 28824368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 35679331 - 35679125
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||| |||||||||||| |||||| |||||  |||||||||||||| | || | || ||       ||| ||||||||||||||||||||||||||||    
T  35679331 tcaagattctttgtcatttaaaaaaaatcttgtagtattcaatcaagactcttaatcacttaaaaaaagtcatgtggtattcaaaatcattcaaatttcg 35679232  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    ||||||||||||||||||   ||||||||||||||  ||||||||| ||||| ||||||| || |||||||||||||||||| | |||||||||||| ||    
T  35679231 aaggattgtttaataaatcagattttgatggatttgatgggattttctagtgaaattttagcatgaaaaagtctttcatgaagacatgagatttcttaag 35679132  T
Q  201 attgttt 207  Q
    |||||||    
T  35679131 attgttt 35679125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 6304456 - 6304247
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatc-aagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttc 99  Q
    |||||| |||||||||||| |||||||||||| ||||||||| | || | | || | || ||       |||| ||||||||||||||||||||||||||    
T  6304456 tcaagattctttgtcatttaaaaaaagtcttgtggtattcaaccaaaaactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttc 6304357  T
Q  100 gaaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttga 199  Q
    |||||||||||||||||||   ||||||||||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| |||| |||||||      
T  6304356 gaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgaaatttcttat 6304257  T
Q  200 gattgttttt 209  Q
    ||||||||||    
T  6304256 gattgttttt 6304247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 74 - 209
Target Start/End: Complemental strand, 49198399 - 49198264
Alignment:
Q  74 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtc 173  Q
    |||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||| ||||| ||||||| || |||||||||    
T  49198399 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 49198300  T
Q  174 tttcatgaaaagatgagatttcttgagattgttttt 209  Q
    ||||||||||| |||| |||||||  ||||||||||    
T  49198299 tttcatgaaaacatgatatttcttaggattgttttt 49198264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 45760213 - 45760004
Alignment:
Q  1 tcaagactctttgtcattttaaaaaa-gtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttc 99  Q
    |||||| ||||||||| ||||||||| ||| || ||||||||||||||| | || | || ||       |||| |||||||||||||||||||||| |||    
T  45760213 tcaagattctttgtcaatttaaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaacttc 45760114  T
Q  100 gaaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttga 199  Q
    |||||||||||||||||||   ||||||||||||||||||||||||| ||||| ||||||| || |||||||| ||| ||||||| ||||||||||||      
T  45760113 gaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtatttgatgaaaacatgagatttcttag 45760014  T
Q  200 gattgttttt 209  Q
    ||||||||||    
T  45760013 gattgttttt 45760004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 12 - 209
Target Start/End: Original strand, 47780719 - 47780916
Alignment:
Q  12 tgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgttt 111  Q
    |||||||| ||||||||| || ||||||||||||||| | || | || ||       |||| ||| |||||||||||||||||| ||  |||||||||||    
T  47780719 tgtcatttaaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtgatattcaaaatcattcaaaattaaaaggattgttt 47780818  T
Q  112 aataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 209  Q
    |||||||   ||||||||||||||||||||||||| ||||| |||||||||| |||||||| ||||||||||| |||||||||||| |||||||||||    
T  47780819 aataaatcagattttgatggattttgtgggattttctagtgaaattttaacatgaaaaagtttttcatgaaaacatgagatttcttaagattgttttt 47780916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 69 - 194
Target Start/End: Complemental strand, 32589088 - 32588963
Alignment:
Q  69 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 168  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||| | |||||||||||||||||| |||||| ||||| ||||||| ||  |||    
T  32589088 gtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaatcggattttgatggattttgtgagattttctagtgaaattttagcataaaa 32588989  T
Q  169 aagtctttcatgaaaagatgagattt 194  Q
    |||||||||||||||| |||||||||    
T  32588988 aagtctttcatgaaaacatgagattt 32588963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 49230883 - 49231008
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||| || ||       ||||||||||||||||||||||||||||||||    
T  49230883 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcg 49230982  T
Q  101 aaggattgtttaataaattgaatttt 126  Q
    ||||||| |||||||||||| |||||    
T  49230983 aaggattatttaataaattggatttt 49231008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 72 - 197
Target Start/End: Complemental strand, 31572329 - 31572204
Alignment:
Q  72 ttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaag 171  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||   ||||||||||||||||||||||||| ||||| |||||||  | |||||||    
T  31572329 ttgtggtattcaaaatcatttaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttatagtgaaattttaggatgaaaaag 31572230  T
Q  172 tctttcatgaaaagatgagatttctt 197  Q
    ||||||||||||  ||||||||||||    
T  31572229 tctttcatgaaatcatgagatttctt 31572204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 47654555 - 47654346
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcacca-tttnnnnnnngtcttgtggtattcaaaatcattcaaatttc 99  Q
    |||||| |||||||||||| ||| |||||||| ||||||||||||| | | || | || ||        |||| |||||||||||||| |||||||||||    
T  47654555 tcaagattctttgtcatttaaaagaagtcttgtggtattcaatcaaaactcttaatcacttaaaaaaaagtctagtggtattcaaaattattcaaatttc 47654456  T
Q  100 gaaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttga 199  Q
    |||||||||||||||||||   ||||||||||||||||||| ||||| ||| | ||||||| || |||||||| ||||||||||| ||||||||||||      
T  47654455 gaaggattgtttaataaatcagattttgatggattttgtggaattttctagggaaattttagcatgaaaaagtatttcatgaaaacatgagatttcttag 47654356  T
Q  200 gattgttttt 209  Q
    ||||||||||    
T  47654355 gattgttttt 47654346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 69 - 197
Target Start/End: Original strand, 49418149 - 49418277
Alignment:
Q  69 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 168  Q
    |||| |||||||||||||||||||||||||| ||||||||||||||||||   ||||||||||||||||||||||||| || || ||||||| || ||||    
T  49418149 gtctagtggtattcaaaatcattcaaatttcaaaggattgtttaataaatcagattttgatggattttgtgggattttctattgaaattttagcatgaaa 49418248  T
Q  169 aagtctttcatgaaaagatgagatttctt 197  Q
    || ||||||||||||| ||||||||||||    
T  49418249 aaatctttcatgaaaatatgagatttctt 49418277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 69 - 184
Target Start/End: Original strand, 45536009 - 45536124
Alignment:
Q  69 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 168  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||||   ||||||||||||||||||||||||| ||||| ||||||| || ||||    
T  45536009 gtctagtggtattcaaaatcattcaaatttcgaaagattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 45536108  T
Q  169 aagtctttcatgaaaa 184  Q
    ||||||||||||||||    
T  45536109 aagtctttcatgaaaa 45536124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 78 - 209
Target Start/End: Original strand, 29556178 - 29556310
Alignment:
Q  78 tattcaaaatcattcaaatttcgaaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttc 177  Q
    ||||||||||||||||||||||||| ||||||||||||||||  ||||||||||||||| ||||||||| || || ||||||| |  ||||||||||||     
T  29556178 tattcaaaatcattcaaatttcgaaagattgtttaataaattagattttgatggattttatgggattttctaatgaaattttagcttgaaaaagtctttt 29556277  T
Q  178 atgaaa-agatgagatttcttgagattgttttt 209  Q
    |||||| | ||||||||||||  ||||||||||    
T  29556278 atgaaacacatgagatttcttaggattgttttt 29556310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 69 - 175
Target Start/End: Original strand, 48524384 - 48524490
Alignment:
Q  69 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 168  Q
    |||||||| ||||||||||||||||||||| ||| |||||||||||||||    |||||||||||||||||||||||| ||||| |||||||||| ||||    
T  48524384 gtcttgtgatattcaaaatcattcaaattttgaaagattgtttaataaatcagtttttgatggattttgtgggattttctagtgaaattttaacatgaaa 48524483  T
Q  169 aagtctt 175  Q
    |||||||    
T  48524484 aagtctt 48524490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 730145 - 730314
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnn-gtcttgtggtattcaaaatcattcaaatttc 99  Q
    |||||| |||||||||||| |||||||||||| ||||||||||||||| | || | || ||        |||| ||||||||||||||||||||||||||    
T  730145 tcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaagtctagtggtattcaaaatcattcaaatttc 730244  T
Q  100 gaaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaa 169  Q
    || | ||||||||||||||   |||||||||||||||||| |||||| ||||| ||||||| || |||||    
T  730245 gacgaattgtttaataaatcagattttgatggattttgtgagattttctagtgaaattttagcatgaaaa 730314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 69 - 197
Target Start/End: Original strand, 33025578 - 33025696
Alignment:
Q  69 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 168  Q
    |||||||||||||||||||||||||||||| |||||||||||||||| ||            |||||||||||||||| || |  ||||||| || ||||    
T  33025578 gtcttgtggtattcaaaatcattcaaattttgaaggattgtttaatacat----------cagattttgtgggattttctaataaaattttagcatgaaa 33025667  T
Q  169 aagtctttcatgaaaagatgagatttctt 197  Q
    |||||||||||||||| ||||||||||||    
T  33025668 aagtctttcatgaaaacatgagatttctt 33025696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 69 - 161
Target Start/End: Original strand, 51085860 - 51085952
Alignment:
Q  69 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaa 161  Q
    |||| |||||||||||||| |||||||||| |||||||| || ||||||||| ||||||||| ||||||||| ||||| | ||| ||||||||    
T  51085860 gtctcgtggtattcaaaataattcaaattttgaaggattattaaataaattggattttgatgaattttgtggaattttcttgtgaaattttaa 51085952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 8141331 - 8141284
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 48  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  8141331 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 8141284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 77 - 136
Target Start/End: Original strand, 955823 - 955882
Alignment:
Q  77 gtattcaaaatcattcaaatttcgaaggattgtttaataaattgaattttgatggatttt 136  Q
    |||||||||||||||||||||||||||| |||||||||||||   |||||||||||||||    
T  955823 gtattcaaaatcattcaaatttcgaagggttgtttaataaatcagattttgatggatttt 955882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 69 - 127
Target Start/End: Original strand, 47784451 - 47784509
Alignment:
Q  69 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgaattttg 127  Q
    ||||||||||||||||||| ||||||| ||| || ||||||||||||||||| ||||||    
T  47784451 gtcttgtggtattcaaaattattcaaacttctaaagattgtttaataaattggattttg 47784509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 22183367 - 22183416
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 50  Q
    |||||| |||||||||||| |||||||||||| |||||||||||||||||    
T  22183367 tcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagatt 22183416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 72 - 127
Target Start/End: Complemental strand, 31622591 - 31622536
Alignment:
Q  72 ttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgaattttg 127  Q
    |||| ||||||||||||||||||||||| || ||||||||||||||| | ||||||    
T  31622591 ttgttgtattcaaaatcattcaaatttcaaaagattgtttaataaatcggattttg 31622536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 94 - 196
Target Start/End: Original strand, 38319996 - 38320098
Alignment:
Q  94 aatttcgaaggattgtttaataaattgaattttgatggattttgt-gggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagat 192  Q
    ||||| ||| ||||||||| ||||| | |||||||| |||||||| ||| |||| ||||| ||||||| ||  ||||||||||||||||||| |||| ||    
T  38319996 aattttgaatgattgtttactaaataggattttgatagattttgttgggtttttttagtg-aattttagcacaaaaaagtctttcatgaaaatatgatat 38320094  T
Q  193 ttct 196  Q
    ||||    
T  38320095 ttct 38320098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 953816 - 953863
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 48  Q
    |||||| |||||||||||| |||||||||||| ||||||| |||||||    
T  953816 tcaagattctttgtcatttaaaaaaagtcttgtggtattcgatcaaga 953863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 91 - 137
Target Start/End: Complemental strand, 43885203 - 43885157
Alignment:
Q  91 tcaaatttcgaaggattgtttaataaattgaattttgatggattttg 137  Q
    |||||||| ||| |||| |||||||||||| ||||||||||||||||    
T  43885203 tcaaattttgaatgattatttaataaattggattttgatggattttg 43885157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 53
Target Start/End: Original strand, 10896845 - 10896882
Alignment:
Q  16 attttaaaaaagtcttgaggtattcaatcaagattttt 53  Q
    |||||||||||||||| |||||||||||||||| ||||    
T  10896845 attttaaaaaagtctttaggtattcaatcaagactttt 10896882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 28824617 - 28824568
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 50  Q
    |||||||||||| | |||| |||||||||||| | |||||||||||||||    
T  28824617 tcaagactctttctaatttaaaaaaagtcttgtgttattcaatcaagatt 28824568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 47784426 - 47784466
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaa 42  Q
    |||||||||||||||| ||||||||||||||| |||||||||    
T  47784426 tcaagactctttgtca-tttaaaaaagtcttgtggtattcaa 47784466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 49198512 - 49198464
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 50  Q
    |||||||||||| ||| ||||||||||||||| | |||||||||||||||    
T  49198512 tcaagactcttt-tcaatttaaaaaagtcttgtgttattcaatcaagatt 49198464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 53
Target Start/End: Complemental strand, 1928442 - 1928406
Alignment:
Q  17 ttttaaaaaagtcttgaggtattcaatcaagattttt 53  Q
    ||||||||||||||| |||||||||||||||| ||||    
T  1928442 ttttaaaaaagtctttaggtattcaatcaagactttt 1928406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 53
Target Start/End: Original strand, 36402293 - 36402329
Alignment:
Q  17 ttttaaaaaagtcttgaggtattcaatcaagattttt 53  Q
    ||||||||||||||| |||||||||||||||| ||||    
T  36402293 ttttaaaaaagtctttaggtattcaatcaagactttt 36402329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 48524274 - 48524326
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagattttt 53  Q
    ||||||||||||   |||| |||||||||||| | ||||||||||||||||||    
T  48524274 tcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattttt 48524326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 53
Target Start/End: Original strand, 52705439 - 52705475
Alignment:
Q  17 ttttaaaaaagtcttgaggtattcaatcaagattttt 53  Q
    ||||| |||||||||| ||||||||||||||||||||    
T  52705439 ttttataaaagtcttgtggtattcaatcaagattttt 52705475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 202; Significance: 1e-110; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 14782337 - 14782099
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||       |||||||||||||||||||||||||||||| |    
T  14782337 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaattttg 14782238  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14782237 aaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 14782138  T
Q  201 attgtttttattttaaaagttactatctttttcttctca 239  Q
    |||||||||||||||||||||||||||||||||||||||    
T  14782137 attgtttttattttaaaagttactatctttttcttctca 14782099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 44726012 - 44725774
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||       |||||||||||||||||||||||||||||| |    
T  44726012 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaattttg 44725913  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44725912 aaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 44725813  T
Q  201 attgtttttattttaaaagttactatctttttcttctca 239  Q
    |||||||||||||||||||||||||||||||||||||||    
T  44725812 attgtttttattttaaaagttactatctttttcttctca 44725774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 39467670 - 39467433
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||       ||||||||||||||||||||||||||||||||    
T  39467670 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcg 39467571  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||    
T  39467570 aaggattgtttaataaattgaattttgatggattttatgggattttgtagtgtaattttaacaagaaaaaatctttcatgaaaagatgagattttttgag 39467471  T
Q  201 attgtttttattttaaaagttactatctttttcttctc 238  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  39467470 attgtttttcttttaaaagttactatctctttcttctc 39467433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 19718083 - 19717856
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||       ||||||||||||||||||||||||||||||||    
T  19718083 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcg 19717984  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    ||| |||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  19717983 aagaattgtttaataaattggattttaatggattttgtgggattttgtagtgtaattttaacaagaaaaagtcttttatgaaaagatgagatttcttgag 19717884  T
Q  201 attgtttttattttaaaagttactatct 228  Q
    ||||||||| ||||||||||||||||||    
T  19717883 attgtttttgttttaaaagttactatct 19717856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 9288659 - 9288436
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| | |||||| || ||       ||||||||||||||||||||||||||||||||    
T  9288659 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaaaattttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcg 9288560  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9288559 aaggattgtttaataaattggattttgatgaattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 9288460  T
Q  201 attgtttttattttaaaagttact 224  Q
    ||||||||| ||||||||||||||    
T  9288459 attgtttttcttttaaaagttact 9288436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 171; E-Value: 7e-92
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 18958929 - 18958706
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||| |||||| |||||       ||||||||||||||||||||||||||||||||    
T  18958929 tcaagactctttatcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcg 18958830  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||    
T  18958829 aaggattgtttaataaattggattttaatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagattagattttttgag 18958730  T
Q  201 attgtttttattttaaaagttact 224  Q
    ||||||||| ||||||||||||||    
T  18958729 attgtttttgttttaaaagttact 18958706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 166; E-Value: 7e-89
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 26856070 - 26856308
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtctt-gaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttc 99  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| || ||       |||||||||||||||||||||||||||||||    
T  26856070 tcaagactctttgtcattttaaaaaagtctttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttc 26856169  T
Q  100 gaaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttga 199  Q
    |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||| || |||||||||||    
T  26856170 gaagtattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcagaaaaaaataagatttcttga 26856269  T
Q  200 gattgtttttattttaaaagttactatctttttcttctc 238  Q
    |||||||||| |||||||||||||||||| |||||||||    
T  26856270 gattgtttttcttttaaaagttactatctctttcttctc 26856308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 18306163 - 18305935
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||       ||||||||||||||||||||||||||||||||    
T  18306163 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcg 18306064  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    || |||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18306063 aaagattgtttaataaattg----------gattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 18305974  T
Q  201 attgtttttattttaaaagttactatctttttcttctca 239  Q
    |||||| || |||||||||||||||||| ||||||||||    
T  18305973 attgttattcttttaaaagttactatctctttcttctca 18305935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 10295583 - 10295360
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    ||||||||||| |||| || |||||||||||||||||||||||||||| |||||| || ||       ||||||||||||||||||||||||||||||||    
T  10295583 tcaagactcttcgtcacttaaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcg 10295484  T
Q  101 aaggattgtttaataaattgaattttgatggatttt-gtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttga 199  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10295483 aaggattgtttaataaattggattttgatggatttttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttga 10295384  T
Q  200 gattgt-ttttattttaaaagtta 222  Q
    |||||| |||| ||||||||||||    
T  10295383 gattgtttttttttttaaaagtta 10295360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 43166892 - 43166655
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||||| ||||  |||| |||||||||||| ||||||||||||||| | ||   |||||       ||||||||||||||||||||||||||||||||    
T  43166892 tcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgtggtattcaaaatcattcaaatttcg 43166793  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  43166792 aaggattgtttaataaattggattttgatggattttgtgggattttgttgtgtaattttaacaagaaaaagtttttcatgaaaagatgagatttcttgag 43166693  T
Q  201 attgtttttattttaaaagttactatctttttcttctc 238  Q
    |||| |||| |||||||||||||||||| |||| ||||    
T  43166692 attggttttcttttaaaagttactatctctttcctctc 43166655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 7466339 - 7466566
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||| |  ||       |||||||||||||||||||||||||||||| |    
T  7466339 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttaaaaaaagtcttgtggtattcaaaatcattcaaattttg 7466438  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    ||| ||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7466439 aagaattgtttaataaattg----------gattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 7466528  T
Q  201 attgtttttattttaaaagttactatctttttcttctc 238  Q
    ||||||||| ||||||||||||| |||| |||||||||    
T  7466529 attgtttttcttttaaaagttacgatctctttcttctc 7466566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 4403111 - 4403334
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    ||||||||| || ||||||||||||| |||||| ||||||||| ||||||||||| || ||        ||| |||||||||||||||||||||||||||    
T  4403111 tcaagactcattttcattttaaaaaaatcttgaagtattcaattaagatttttcatcacttaaaaaaaatctcgtggtattcaaaatcattcaaatttcg 4403210  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    ||||||||||||||||||||  |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| |    
T  4403211 aaggattgtttaataaattgggttttgatggattttgtgggattttttagtgtaattttaacaagaaaaagtctttcatgaaaatatgagatttcttggg 4403310  T
Q  201 attgtttttattttaaaagttact 224  Q
    ||||||||| ||||||||||||||    
T  4403311 attgtttttcttttaaaagttact 4403334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 32497529 - 32497744
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||| |||||| || ||       ||||||||||||||||||||||||||||||||    
T  32497529 tcaatactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcg 32497628  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    || |||||||||||||||||          |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  32497629 aatgattgtttaataaattg----------gattttgtgggattttgtagtgtaattttaacaagagaaagtctttcatgaaaagatgagatttcttgag 32497718  T
Q  201 attgtttttattttaaaagttactat 226  Q
    ||||||||| ||||||||||||||||    
T  32497719 attgtttttcttttaaaagttactat 32497744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 16362200 - 16362411
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||  | ||       |||| |||||||||||||||||||||||||||    
T  16362200 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcattacttaaaaaaagtctcgtggtattcaaaatcattcaaatttcg 16362299  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    |||||||||||||||||||| ||||||||||||          ||||||||||||||||||||||||||| ||||| || ||||||||||||||||||||    
T  16362300 aaggattgtttaataaattggattttgatggat----------tttgtagtgtaattttaacaagaaaaaatcttttataaaaagatgagatttcttgag 16362389  T
Q  201 attgtttttattttaaaagtta 222  Q
    ||||||||| ||||||||||||    
T  16362390 attgtttttcttttaaaagtta 16362411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 42305987 - 42305774
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||        |||||||||||||||||| ||||||||||||    
T  42305987 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaaatcttgtggtattcaaaataattcaaatttcg 42305888  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    |||||||||||||| ||||| ||||| |||||||||||          ||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  42305887 aaggattgtttaatcaattggattttaatggattttgt----------agtgtaattttaacaagaaaaagtcattcatgaaaaaatgagatttcttgag 42305798  T
Q  201 attgtttttattttaaaagttact 224  Q
    ||||||||| |||| |||||||||    
T  42305797 attgtttttgtttttaaagttact 42305774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 26374632 - 26374424
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||| |||||||||||| |||||||||||| ||||||||||||||| | || | || ||       |||| |||||||||||||||||||||||||||    
T  26374632 tcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcg 26374533  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    ||||||||||||||||||   ||||||||||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||  |    
T  26374532 aaggattgtttaataaataagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttagg 26374433  T
Q  201 attgttttt 209  Q
    |||||||||    
T  26374432 attgttttt 26374424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 31623699 - 31623900
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||| || ||       ||||||||||||||||||||||||||||||||    
T  31623699 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcg 31623798  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    ||||||||||||||||||||                    |||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||    
T  31623799 aaggattgtttaataaattg--------------------gattttgtagtgtaattttaacaagaaaaagtttttcatgaaaagataagatttcttgag 31623878  T
Q  201 attgtttttattttaaaagtta 222  Q
    ||||||||| ||||||||||||    
T  31623879 attgtttttcttttaaaagtta 31623900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 2705021 - 2704813
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||| |||||||||||| |||||||||||| ||||||||||||||| | || | || ||       |||| |||||||||||||||||||||||||||    
T  2705021 tcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcg 2704922  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    || |||||||||||||||  |||||||||||||||||||||||||| |||||  |||||| || |||||||||||||||||||| ||||||||||||  |    
T  2704921 aatgattgtttaataaatcaaattttgatggattttgtgggattttctagtgatattttagcatgaaaaagtctttcatgaaaacatgagatttcttagg 2704822  T
Q  201 attgttttt 209  Q
    |||||||||    
T  2704821 attgttttt 2704813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 24502015 - 24501807
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||| ||||| |||||| |||||||||||| ||||||||||||||| | || | || ||       |||| |||||||||||||||||||||||||||    
T  24502015 tcaagattctttatcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcg 24501916  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    ||||||||||||||||||   ||||||||||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||  |    
T  24501915 aaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttagg 24501816  T
Q  201 attgttttt 209  Q
    |||||||||    
T  24501815 attgttttt 24501807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 42938319 - 42938111
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||| | |||||||||| |||||||||||| ||||||||||||||| | || | || ||       |||| |||||||||||||||||||||||||||    
T  42938319 tcaagattatttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcg 42938220  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    ||||||||||||||||||   ||||||||||||||||||||||||| ||||| ||||||| |  |||||||||||||||||||| ||||||||||||  |    
T  42938219 aaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcctgaaaaagtctttcatgaaaacatgagatttcttagg 42938120  T
Q  201 attgttttt 209  Q
    |||||||||    
T  42938119 attgttttt 42938111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 22 - 224
Target Start/End: Original strand, 37857144 - 37857336
Alignment:
Q  22 aaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattga 121  Q
    ||||||| |||||||||||||| ||||||||||| || ||       ||||||||||||||||| ||||||||||||  ||||||||||||||||||||     
T  37857144 aaaaagttttgaggtattcaattaagatttttcatcacttaaaaaaagtcttgtggtattcaaattcattcaaattttaaaggattgtttaataaattgg 37857243  T
Q  122 attttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagtt 221  Q
    ||||||||||||          ||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  37857244 attttgatggat----------tttgtagtgtaatttgaacaagaaaaaatctttcatgaaaagatgagatttcttgagattgtttttcttttaaaagtt 37857333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 194
Target Start/End: Complemental strand, 10392439 - 10392246
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||| ||||||||||||||||||| ||||| | ||||||||||||| |||| | || ||       |||| |||||||||| ||||||||||||||||    
T  10392439 tcaagattctttgtcattttaaaaaattcttgtgatattcaatcaagacttttaatcacttaagaaaagtctagtggtattcagaatcattcaaatttcg 10392340  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagattt 194  Q
    ||||||||||||||||||   ||||||||||||||||||||||||| ||||| ||||||| || |||||| ||||||||||||| |||||||||    
T  10392339 aaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaaatctttcatgaaaacatgagattt 10392246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 69 - 209
Target Start/End: Original strand, 42937423 - 42937563
Alignment:
Q  69 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 168  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||| ||||| ||||||| ||  |||    
T  42937423 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcattaaa 42937522  T
Q  169 aagtctttcatgaaaagatgagatttcttgagattgttttt 209  Q
    |||||||||||||||| ||||||||||||  ||||||||||    
T  42937523 aagtctttcatgaaaacatgagatttcttatgattgttttt 42937563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 11 - 209
Target Start/End: Complemental strand, 7507091 - 7506893
Alignment:
Q  11 ttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 110  Q
    ||||||||| | |||||||||| ||||||||||||||| | || | || ||       |||| ||||||||||||| ||||||||||| |||||||||||    
T  7507091 ttgtcatttaagaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaaccattcaaattttgaaggattgtt 7506992  T
Q  111 taataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 209  Q
    ||||||||   ||||||||||||||||||||||||| ||||| ||||||| || |||||||||||||||| ||| ||||||||||||  ||||||||||    
T  7506991 taataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgtaaacatgagatttcttaggattgttttt 7506893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 5576823 - 5576614
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnn-gtcttgtggtattcaaaatcattcaaatttc 99  Q
    |||||| |||||||||||| |||||||||||| ||||||||||||||| | || | || ||        |||  ||||||||||||||||||||||||||    
T  5576823 tcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaagtcaagtggtattcaaaatcattcaaatttc 5576724  T
Q  100 gaaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttga 199  Q
    |||| |||||||||||||    ||||||||||||||||||||||||| ||||| ||||||| || |||||||||||| ||||||| ||||||||||||      
T  5576723 gaagaattgtttaataaaccagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttag 5576624  T
Q  200 gattgttttt 209  Q
    ||||||||||    
T  5576623 gattgttttt 5576614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 77 - 221
Target Start/End: Complemental strand, 39189940 - 39189798
Alignment:
Q  77 gtattcaaaatcattcaaatttcgaaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtcttt 176  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||  | ||||| ||||  ||||||||||||||||| |||||    
T  39189940 gtattcaacatcattcaaatttcgaaggattgtttaataaattgaattt-gatggattttgatgaattttctagta-aattttaacaagaaaaaatcttt 39189843  T
Q  177 catgaaaagatgagatttcttgagattgtttttattttaaaagtt 221  Q
    |||||||| ||||||||||||| |||||||||| |||||||||||    
T  39189842 catgaaaacatgagatttcttgggattgtttttcttttaaaagtt 39189798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 42735479 - 42735271
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||| ||||| |||||| ||||||| |||| |||||||||| |||| | || | || ||       |||| |||||||||||||||||||||||||||    
T  42735479 tcaagattctttatcatttaaaaaaagacttgtggtattcaattaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcg 42735380  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    ||| ||||||||||||||   ||||||||||||||||||||||||| ||||| ||||||| |  ||||||||||||||| |||| ||||||||||||  |    
T  42735379 aagtattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcttgaaaaagtctttcataaaaacatgagatttcttagg 42735280  T
Q  201 attgttttt 209  Q
    |||||||||    
T  42735279 attgttttt 42735271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 23115370 - 23115163
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||| |||||||||||| ||||| |||||| ||||||||||||||| | || | || ||       |||| |||||||||||| |||||||||||| |    
T  23115370 tcaagattctttgtcatttaaaaaatgtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaa-tcattcaaatttgg 23115272  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    ||||||||||||||||||   ||||||||||||||||||||||||| || || ||||||  || |||||||||||||||||||| |||||||| |||  |    
T  23115271 aaggattgtttaataaatcagattttgatggattttgtgggattttctaatgaaattttggcatgaaaaagtctttcatgaaaacatgagattccttagg 23115172  T
Q  201 attgttttt 209  Q
    |||||||||    
T  23115171 attgttttt 23115163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 4031460 - 4031334
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||  | ||       ||||||||||||||||||||||||||||||||    
T  4031460 tcaagaatctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcataaattaaaaaaagtcttgtggtattcaaaatcattcaaatttcg 4031361  T
Q  101 aaggattgtttaataaattgaattttg 127  Q
    |||||||||||||||||||| ||||||    
T  4031360 aaggattgtttaataaattggattttg 4031334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 41479101 - 41479299
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||| |||||||||||| |||||||||||| ||||||||||||||| | || | || ||       ||||  ||||||||||||||||||||||||||    
T  41479101 tcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctaatggtattcaaaatcattcaaatttcg 41479200  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    || |||||||||||||||            |||||||||||||||| ||||  ||||||| || |||||| ||||||||||||| ||||||||||||  |    
T  41479201 aatgattgtttaataaatca----------gattttgtgggattttctagtaaaattttagcatgaaaaaatctttcatgaaaacatgagatttcttagg 41479290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 43959662 - 43959859
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||| ||||||||||||||||||||||||| | ||||||||||||||| || | || ||       | || |||||||||||||||||||||||||||    
T  43959662 tcaagattctttgtcattttaaaaaagtcttgtg-tattcaatcaagattcttaatcacttcaaaaaagactagtggtattcaaaatcattcaaatttcg 43959760  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    || |||||||||||||||   ||||||||||||||||||          ||| ||||||| || |||||||||||| || |||| ||||||||||||  |    
T  43959761 aatgattgtttaataaatcagattttgatggattttgtg----------gtgaaattttagcatgaaaaagtctttaattaaaacatgagatttcttatg 43959850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 69 - 209
Target Start/End: Complemental strand, 4950150 - 4950010
Alignment:
Q  69 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 168  Q
    |||||| ||||||||||||||||||| |||| || |||| |||||||||||  ||||||||||| ||||||| ||||| ||||| ||||||| || ||||    
T  4950150 gtcttggggtattcaaaatcattcaagtttcaaaagattatttaataaattagattttgatggaatttgtggaattttctagtgaaattttagcatgaaa 4950051  T
Q  169 aagtctttcatgaaaagatgagatttcttgagattgttttt 209  Q
    || | ||||||| ||| || ||||||||| | |||||||||    
T  4950050 aaatatttcatgcaaacataagatttcttaaaattgttttt 4950010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 32711484 - 32711367
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||| |||||||||||| |||||||||||| ||||||||||||||| | || | || ||       |||| |||||||||||||||||| ||||||||    
T  32711484 tcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcatttaaatttcg 32711385  T
Q  101 aaggattgtttaataaat 118  Q
    ||||||||||||||||||    
T  32711384 aaggattgtttaataaat 32711367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 75 - 146
Target Start/End: Complemental strand, 8410526 - 8410455
Alignment:
Q  75 tggtattcaaaatcattcaaatttcgaaggattgtttaataaattgaattttgatggattttgtgggatttt 146  Q
    ||||||||||||||||| |||||| ||||||||||||| ||||||| | |||||||||||||||||||||||    
T  8410526 tggtattcaaaatcattgaaatttggaaggattgtttactaaattggactttgatggattttgtgggatttt 8410455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 69 - 184
Target Start/End: Complemental strand, 13478384 - 13478269
Alignment:
Q  69 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 168  Q
    ||||||| |||||||||||| || |||||||||||||||||||||||||||  |||| | |||||||||| ||||||| |||   ||||||| || || |    
T  13478384 gtcttgtagtattcaaaatcttttaaatttcgaaggattgtttaataaattagatttcgttggattttgtaggattttttagctaaattttagcatgata 13478285  T
Q  169 aagtctttcatgaaaa 184  Q
    |||||||| |||||||    
T  13478284 aagtcttttatgaaaa 13478269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 140 - 187
Target Start/End: Complemental strand, 4031341 - 4031294
Alignment:
Q  140 ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 187  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  4031341 ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 4031294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 70 - 126
Target Start/End: Original strand, 41070018 - 41070074
Alignment:
Q  70 tcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgaatttt 126  Q
    |||||||||||| |||||||||| |||||| || |||||||| ||||||||||||||    
T  41070018 tcttgtggtatttaaaatcattccaatttcaaatgattgtttgataaattgaatttt 41070074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 53
Target Start/End: Original strand, 14061595 - 14061628
Alignment:
Q  20 taaaaaagtcttgaggtattcaatcaagattttt 53  Q
    ||||||||||||| ||||||||||||||||||||    
T  14061595 taaaaaagtcttgtggtattcaatcaagattttt 14061628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 53
Target Start/End: Complemental strand, 1606051 - 1606015
Alignment:
Q  17 ttttaaaaaagtcttgaggtattcaatcaagattttt 53  Q
    ||||| |||||||||| ||||||||||||||||||||    
T  1606051 ttttataaaagtcttgtggtattcaatcaagattttt 1606015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 53
Target Start/End: Original strand, 2112837 - 2112873
Alignment:
Q  17 ttttaaaaaagtcttgaggtattcaatcaagattttt 53  Q
    ||||| |||||||||| ||||||||||||||||||||    
T  2112837 ttttataaaagtcttgtggtattcaatcaagattttt 2112873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 78 - 126
Target Start/End: Complemental strand, 9770545 - 9770497
Alignment:
Q  78 tattcaaaatcattcaaatttcgaaggattgtttaataaattgaatttt 126  Q
    |||||||||| ||||||||||| ||| ||| |||||||||||| |||||    
T  9770545 tattcaaaataattcaaatttcaaagaattatttaataaattggatttt 9770497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 53
Target Start/End: Complemental strand, 29260314 - 29260278
Alignment:
Q  17 ttttaaaaaagtcttgaggtattcaatcaagattttt 53  Q
    ||||| |||||||||| ||||||||||||||||||||    
T  29260314 ttttataaaagtcttgtggtattcaatcaagattttt 29260278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 53
Target Start/End: Original strand, 35142088 - 35142124
Alignment:
Q  17 ttttaaaaaagtcttgaggtattcaatcaagattttt 53  Q
    |||||||||||||||| ||||||||||||| ||||||    
T  35142088 ttttaaaaaagtcttgtggtattcaatcaaaattttt 35142124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 52
Target Start/End: Complemental strand, 38806914 - 38806882
Alignment:
Q  20 taaaaaagtcttgaggtattcaatcaagatttt 52  Q
    ||||||| |||||||||||||||||||||||||    
T  38806914 taaaaaaatcttgaggtattcaatcaagatttt 38806882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 53
Target Start/End: Complemental strand, 41386908 - 41386872
Alignment:
Q  17 ttttaaaaaagtcttgaggtattcaatcaagattttt 53  Q
    ||||| |||||||||| ||||||||||||||||||||    
T  41386908 ttttataaaagtcttgtggtattcaatcaagattttt 41386872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 53
Target Start/End: Original strand, 42275018 - 42275054
Alignment:
Q  17 ttttaaaaaagtcttgaggtattcaatcaagattttt 53  Q
    ||||| |||||||||| ||||||||||||||||||||    
T  42275018 ttttataaaagtcttgtggtattcaatcaagattttt 42275054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 53
Target Start/End: Complemental strand, 43605402 - 43605366
Alignment:
Q  17 ttttaaaaaagtcttgaggtattcaatcaagattttt 53  Q
    ||||| |||||||||| ||||||||||||||||||||    
T  43605402 ttttataaaagtcttgtggtattcaatcaagattttt 43605366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 202; Significance: 1e-110; HSPs: 81)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 36674333 - 36674095
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||       |||||||||||||||||||||||||||||| |    
T  36674333 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaattttg 36674234  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36674233 aaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 36674134  T
Q  201 attgtttttattttaaaagttactatctttttcttctca 239  Q
    |||||||||||||||||||||||||||||||||||||||    
T  36674133 attgtttttattttaaaagttactatctttttcttctca 36674095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 34484233 - 34483995
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||       || |||||||||||||||||||||||||||||    
T  34484233 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagttttgtggtattcaaaatcattcaaatttcg 34484134  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  34484133 aaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaaatctttcatgaaaagatgagatttcttgag 34484034  T
Q  201 attgtttttattttaaaagttactatctttttcttctca 239  Q
    ||||||||| |||||||||||||||||| ||||||||||    
T  34484033 attgtttttgttttaaaagttactatctctttcttctca 34483995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 44906716 - 44906479
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||| || ||       ||||||||||||||||||||||||||||||||    
T  44906716 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcg 44906617  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  44906616 aaggattgtttaataaattggattttgatgaattttgtgggattttgtagtgtaattttaacaagaaaatgtctttcatgaaaagatgagatttcttgag 44906517  T
Q  201 attgtttttattttaaaagttactatctttttcttctc 238  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  44906516 attgtttttcttttaaaagttactatctctttcttctc 44906479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 32580180 - 32580415
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    ||||| ||||||||||||||||||||||||||||||||||||| |||| |||||| |||||       ||||||||||||||||||||||||||||||||    
T  32580180 tcaaggctctttgtcattttaaaaaagtcttgaggtattcaat-aagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcg 32580278  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    |||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32580279 aaggattgtttaataaattggattttgatggattttgagggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 32580378  T
Q  201 attgtttttattttaaaagttactatctttttcttct 237  Q
    |||||||||||||||||| ||||||||||||||||||    
T  32580379 attgtttttattttaaaaattactatctttttcttct 32580415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 3 - 222
Target Start/End: Original strand, 11431531 - 11431750
Alignment:
Q  3 aagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaa 102  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||       ||||||||||||||||||||||| ||||||||||    
T  11431531 aagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcatttaaatttcgaa 11431630  T
Q  103 ggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagat 202  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11431631 ggattgtttaataaattggattttggtggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagat 11431730  T
Q  203 tgtttttattttaaaagtta 222  Q
    ||||||||||||||||||||    
T  11431731 tgtttttattttaaaagtta 11431750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 17946291 - 17946528
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||| |||||| || ||       |||| ||| ||||||||||||||||||||||     
T  17946291 tcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtctcgtgatattcaaaatcattcaaatttca 17946390  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17946391 aaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 17946490  T
Q  201 attgtttttattttaaaagttactatctttttcttctc 238  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  17946491 attgtttttcttttaaaagttactatctatttcttctc 17946528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 48379160 - 48379397
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||| |||||| || ||       ||||||||||||||||||||||||||||||||    
T  48379160 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatctagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcg 48379259  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||||||||||    
T  48379260 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaataagaaaatgtctttcatgaaaagatcagatttcttgag 48379359  T
Q  201 attgtttttattttaaaagttactatctttttcttctc 238  Q
    ||||||||| ||||||| |||||||||| |||||||||    
T  48379360 attgtttttcttttaaatgttactatctctttcttctc 48379397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 173; E-Value: 5e-93
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 26107264 - 26107501
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||| |||||| || ||       ||||||||||||||||||||||||||||||||    
T  26107264 tcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcaattaaaaaaagtcttgtggtattcaaaatcattcaaatttcg 26107363  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    |||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||    
T  26107364 aaggattgtttaataaattggattttgatggattttgtgtgattttgtagtgtaattttaacaagaaaaagtatttcataaaaagatgagatttcttgag 26107463  T
Q  201 attgtttttattttaaaagttactatctttttcttctc 238  Q
    ||||||||| |||||||||||||| ||| |||||||||    
T  26107464 attgtttttcttttaaaagttactttctctttcttctc 26107501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 1 - 234
Target Start/End: Original strand, 52810381 - 52810614
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||| |||||| |||||       |||||||||||||||||||||||||||||| |    
T  52810381 tcaagactctttgtcattttaaaaaagttttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaattttg 52810480  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||    
T  52810481 aatgattgtttaataaattgaattttgatggattttgtgggattttgtagcgtaattttaacaagaaaaaatctttcatgaaaagatgagatttcttgag 52810580  T
Q  201 attgtttttattttaaaagttactatctttttct 234  Q
    ||||||||| |||||||||  ||||||| |||||    
T  52810581 attgtttttcttttaaaagaaactatctctttct 52810614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 166; E-Value: 7e-89
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 52618168 - 52617937
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||| || ||       ||||||||||||||||||||||||||||||||    
T  52618168 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcg 52618069  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||      ||||||||||| ||||||||||||||||||||    
T  52618068 aaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaac------aagtctttcataaaaagatgagatttcttgag 52617975  T
Q  201 attgtttttattttaaaagttactatctttttcttctc 238  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  52617974 attgtttttcttttaaaagttactatctctttcttctc 52617937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 18 - 234
Target Start/End: Original strand, 18749632 - 18749848
Alignment:
Q  18 tttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaa 117  Q
    |||||||||||||||||||||||||| || | |||||| || ||       |||||||||||||||||||||||||||||||||||||||||||||||||    
T  18749632 tttaaaaaagtcttgaggtattcaataaaaacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaa 18749731  T
Q  118 ttgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttattttaaa 217  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  18749732 ttggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttcttttaaa 18749831  T
Q  218 agttactatctttttct 234  Q
    ||||||||||| |||||    
T  18749832 agttactatctctttct 18749848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 40897147 - 40897375
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||| || ||       ||||| ||||||||||||||||||||||||||    
T  40897147 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttatggtattcaaaatcattcaaatttcg 40897246  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  40897247 aaggattgtttaataaattggattttgatggattttgtgggattttatagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgat 40897346  T
Q  201 attgtttttatttt-aaaagttactatct 228  Q
    ||||||||| ||||  |||||||||||||    
T  40897347 attgtttttcttttgtaaagttactatct 40897375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 54628846 - 54629085
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnng-tcttgtggtattcaaaatcattcaaatttc 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||            ||||||||||||||||||||||||||||||    
T  54628846 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacaaaaaaaaaaatcttgtggtattcaaaatcattcaaatttc 54628945  T
Q  100 gaaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttga 199  Q
     |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  54628946 aaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcataaaaagatgagatttcttga 54629045  T
Q  200 gattgtttttattttaaaagttactatctttttcttctca 239  Q
    |||||||||| |||| ||||||||||||| ||||||||||    
T  54629046 gattgtttttcttttgaaagttactatctctttcttctca 54629085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 31646487 - 31646251
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||||||||||| |||||||||||||||||| |||||||||||||| |||||| |||||        |||||||||||||||||||||||||||||||    
T  31646487 tcaagactctttgttattttaaaaaagtcttgacgtattcaatcaagacttttcatcatttaaaaaaaatcttgtggtattcaaaatcattcaaatttcg 31646388  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    || ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  31646387 aaagattgtttaatgaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaa--atgagatttcttgag 31646290  T
Q  201 attgtttttattttaaaagttactatctttttcttctca 239  Q
    |||||| || ||||||||||||||| || ||||||||||    
T  31646289 attgttattcttttaaaagttactacctctttcttctca 31646251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 51737930 - 51737693
Alignment:
Q  1 tcaagactctttgtcattttaaaaaa-gtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttc 99  Q
    |||||||||||| ||||||||||||| |||||||||||||||||||||| |||||| || ||       |||||||||||||||||||||||||||||||    
T  51737930 tcaagactctttatcattttaaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttc 51737831  T
Q  100 gaaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttga 199  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||| ||  |||||||    
T  51737830 gaaggattgtttaataaattggattttgatggattttgtgggattttgttgtgtaattttaacaagaaaaagtctttcataaaaagataagtattcttga 51737731  T
Q  200 gattgtttttattttaaaagttactatctttttcttctc 238  Q
    ||||||||||  ||||||||||| ||||| |||||||||    
T  51737730 gattgttttt-ctttaaaagttattatctctttcttctc 51737693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 10728844 - 10728629
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||| || ||       ||||||||||||| |||||||||||||||| |    
T  10728844 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttacaaaaagtcttgtggtatttaaaatcattcaaatttgg 10728745  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    |||||||||||||||||||| |||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10728744 aaggattgtttaataaattggattttgatggattttgt----------agtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 10728655  T
Q  201 attgtttttattttaaaagttactat 226  Q
    ||||||||| ||||||||||||||||    
T  10728654 attgtttttcttttaaaagttactat 10728629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 139; E-Value: 9e-73
Query Start/End: Original strand, 1 - 211
Target Start/End: Complemental strand, 50903446 - 50903233
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnn---gtcttgtggtattcaaaatcattcaaatt 97  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||| |||| | |||||          |||||||||||||||||||||||||||||    
T  50903446 tcaagactctttgtcattttaaaaaagtcttaaggtattcaatcaagactttttatcatttaaaaaaaaaagtcttgtggtattcaaaatcattcaaatt 50903347  T
Q  98 tcgaaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 197  Q
      ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| ||||||||||||    
T  50903346 aagaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaaatcttttatgaaaatatgagatttctt 50903247  T
Q  198 gagattgtttttat 211  Q
    ||||||||||||||    
T  50903246 gagattgtttttat 50903233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 37454864 - 37455075
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||| ||||||||||||||||||||||||||| ||||||||||||| |||||| |||||       ||||||||||||||||||||||||||||||||    
T  37454864 tcaagattctttgtcattttaaaaaagtcttgagatattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcg 37454963  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    || ||||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  37454964 aatgattgtttaataaattga----------attttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgagatttcttgag 37455053  T
Q  201 attgtttttattttaaaagtta 222  Q
    ||||||||| ||||||||||||    
T  37455054 attgtttttcttttaaaagtta 37455075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 39038043 - 39038260
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||| || ||       |||||||||||| |||||||||||||||||||    
T  39038043 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcactttaaaaaagtcttgtggtatccaaaatcattcaaatttcg 39038142  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    ||| |||||||||||||||| ||||||||||||          |||||||||||||||||||||||||||||||||||| |||||||||||||||||||     
T  39038143 aagaattgtttaataaattggattttgatggat----------tttgtagtgtaattttaacaagaaaaagtctttcataaaaagatgagatttcttgaa 39038232  T
Q  201 attgtttttattttaaaagttactatct 228  Q
    ||||||||| ||||||||||||||||||    
T  39038233 attgtttttcttttaaaagttactatct 39038260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 50762253 - 50762038
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||||||||||||||||||||||||||||||| |||||||||| || ||||||  ||||       |||||||||||||||||||||||| |||||||    
T  50762253 tcaagactctttgtcattttaaaaaagtcttgagatattcaatcatgacttttcataatttaaaaaaagtcttgtggtattcaaaatcattctaatttcg 50762154  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    || |||||||| |||||||| |||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50762153 aatgattgtttgataaattggattttgatggattttgt----------agtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 50762064  T
Q  201 attgtttttattttaaaagttactat 226  Q
    ||||||||| ||||||||||||||||    
T  50762063 attgtttttcttttaaaagttactat 50762038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 193
Target Start/End: Original strand, 20832995 - 20833187
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||| || ||       |||||||||||||||||||||||||||||  |    
T  20832995 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagaattttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaattcgg 20833094  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatt 193  Q
    |||||||||||||||||||| |||||||||||||||||| |||||  ||||||||||||||||||||||||| |||||||||||||| |||||    
T  20833095 aaggattgtttaataaattggattttgatggattttgtgagatttattagtgtaattttaacaagaaaaagtatttcatgaaaagataagatt 20833187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 6035256 - 6035039
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||| || ||       |||| ||| |||||||||||||||||||||||    
T  6035256 tcaagagtctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcatcacttaaaaaaagtctcgtgatattcaaaatcattcaaatttcg 6035157  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    ||| | |||||||||||||  ||||||||||||||||||||||||| ||||  ||||||| || ||||||||||||||| |||| |||||||||||| ||    
T  6035156 aagcaatgtttaataaattagattttgatggattttgtgggattttctagtaaaattttagcatgaaaaagtctttcataaaaacatgagatttcttaag 6035057  T
Q  201 attgtttttattttaaaa 218  Q
    ||||||||| ||||||||    
T  6035056 attgtttttcttttaaaa 6035039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 234
Target Start/End: Complemental strand, 23753589 - 23753377
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||| |||||| |||||       ||||||||||||||||||||||||||||||||    
T  23753589 tcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcg 23753490  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    |||||||||||||||||||                    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  23753489 aaggattgtttaataaatt--------------------ggattttgtagtgtaattttaacaagaaaaagtctttcatg-aaagatgagatttcttgag 23753411  T
Q  201 attgtttttattttaaaagttactatctttttct 234  Q
    ||||||||| |||||||||||||||||| |||||    
T  23753410 attgtttttgttttaaaagttactatctctttct 23753377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 10660538 - 10660752
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||       || |||||||||||||||||||||||||||||    
T  10660538 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtattgtggtattcaaaatcattcaaatttcg 10660637  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    |||||||||||||||||||| ||||||||          ||||||||||||||||||||||||              |||||||||||||||||||||||    
T  10660638 aaggattgtttaataaattggattttgat----------ggattttgtagtgtaattttaaca--------------atgaaaagatgagatttcttgag 10660713  T
Q  201 attgtttttattttaaaagttactatctttttcttctca 239  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  10660714 attgtttttattttaaaagttactatttttttcttctca 10660752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 996289 - 996081
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||| ||||| |||||| |||||||||||| ||||||||||||||||| || | || ||       |||| |||||||||||||||||||||||||||    
T  996289 tcaagattctttatcatttcaaaaaagtcttgtggtattcaatcaagattcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcg 996190  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    ||||||||||||||||||   ||||||||||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||  |    
T  996189 aaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttagg 996090  T
Q  201 attgttttt 209  Q
    |||||||||    
T  996089 attgttttt 996081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 19253830 - 19254038
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||| |||||||||||| |||||||||||| ||||||||||||||| | || | || ||       |||| |||||||||||||||||||||||||||    
T  19253830 tcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcg 19253929  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    ||||||||||||||||||   ||||||||||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||  |    
T  19253930 aaggattgtttaataaataagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttagg 19254029  T
Q  201 attgttttt 209  Q
    |||||||||    
T  19254030 attgttttt 19254038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 20498212 - 20498420
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||| |||||||||||| |||||||||||| ||||||||||||||| | || | || ||       |||| |||||||||||||||||||||||||||    
T  20498212 tcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcg 20498311  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    ||||||||||||||||||   ||||||||||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||  |    
T  20498312 aaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttagg 20498411  T
Q  201 attgttttt 209  Q
    |||||||||    
T  20498412 attgttttt 20498420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 37820680 - 37820472
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||| |||||||||||| |||||| ||||| ||||||||||||||||| || | || ||       |||| |||||||||||||||||||||||||||    
T  37820680 tcaagattctttgtcatttaaaaaaattcttgtggtattcaatcaagattcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcg 37820581  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    ||||||||||||||||||   |||||||||||||||||||||||||  |||| ||||||| || ||||||||||||||| |||| |||||||||||| ||    
T  37820580 aaggattgtttaataaatcagattttgatggattttgtgggattttccagtgaaattttagcatgaaaaagtctttcataaaaacatgagatttcttaag 37820481  T
Q  201 attgttttt 209  Q
    |||||||||    
T  37820480 attgttttt 37820472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 10139349 - 10139141
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||| || || |||||| |||||||||||| ||||||||||||||| | || | || ||       |||| |||||||||||||||||||||||||||    
T  10139349 tcaagattccttatcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcg 10139250  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    ||||||||||||||||||   ||||||||||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||  |    
T  10139249 aaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttagg 10139150  T
Q  201 attgttttt 209  Q
    |||||||||    
T  10139149 attgttttt 10139141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 22 - 209
Target Start/End: Complemental strand, 3206387 - 3206200
Alignment:
Q  22 aaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattga 121  Q
    ||||||||||| ||||||||||||||| | || | || ||       |||| |||||||||||||||||||||||||||||||||||||||||||||       
T  3206387 aaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcag 3206288  T
Q  122 attttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 209  Q
    ||||||||||||||||||||||||| ||||| ||||||| ||||||||||||||||||||||| ||||||||||||  ||||||||||    
T  3206287 attttgatggattttgtgggattttctagtgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttatgattgttttt 3206200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 11 - 209
Target Start/End: Original strand, 6589577 - 6589775
Alignment:
Q  11 ttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 110  Q
    ||||||||| |||||||||||| ||||||||||||||| | || | |||||       |||| |||||||||||||||||||||||||||||| ||| ||    
T  6589577 ttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcatttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaagaattatt 6589676  T
Q  111 taataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 209  Q
    ||||||||   ||||||||||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||  ||||||||||    
T  6589677 taataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgttttt 6589775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 3999848 - 3999640
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||| |||||||||||| |||||||||||| ||||||||||||||| | || | || ||        ||| |||||||||||||||||||||||||||    
T  3999848 tcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaatctagtggtattcaaaatcattcaaatttcg 3999749  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    ||||||||||||||||||   ||||||||||||||||||||||||| ||||| |||||||  | ||||||||||||||| |||| ||||||||||||  |    
T  3999748 aaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagaatgaaaaagtctttcataaaaacatgagatttcttagg 3999649  T
Q  201 attgttttt 209  Q
    |||||||||    
T  3999648 attgttttt 3999640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 3 - 206
Target Start/End: Complemental strand, 33808000 - 33807796
Alignment:
Q  3 aagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnn-gtcttgtggtattcaaaatcattcaaatttcga 101  Q
    |||| |||||||||||| |||||||||||| ||||||||||||||| | || | || ||        |||| ||||||||||||||||||||||||||||    
T  33808000 aagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaagtctagtggtattcaaaatcattcaaatttcga 33807901  T
Q  102 aggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgaga 201  Q
    |||||||||||||||||   ||||||||||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||  ||    
T  33807900 aggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttagga 33807801  T
Q  202 ttgtt 206  Q
    |||||    
T  33807800 ttgtt 33807796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 40246847 - 40247055
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||| |||||||||||| |||||||| ||| ||||||||||||||| | || | || ||       |||| ||||||||||||||||||||||||| |    
T  40246847 tcaagattctttgtcatttaaaaaaagttttgtggtattcaatcaagactattaatcagttaaaaaaagtctagtggtattcaaaatcattcaaatttgg 40246946  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    ||||||||||||||||||   ||||||||||||||||||||||||| ||||| ||||||  || |||||||||||||||||||| |||||||| |||  |    
T  40246947 aaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttggcatgaaaaagtctttcatgaaaacatgagattccttatg 40247046  T
Q  201 attgttttt 209  Q
    |||||||||    
T  40247047 attgttttt 40247055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 44762240 - 44762032
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||| |||||||||||| ||||||||| ||  |||||||||||||| | || | || ||       |||| |||||||| ||||| |||||| |||||    
T  44762240 tcaagattctttgtcatttaaaaaaagtcatgtagtattcaatcaagactcttaatcacttaaaaaaagtctagtggtatttaaaattattcaagtttcg 44762141  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    ||||||||||||||||||   ||||||||||||||||||||||||| ||||| ||||||| || |||||||||||| ||||||| |||||||||||| ||    
T  44762140 aaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaag 44762041  T
Q  201 attgttttt 209  Q
    |||||||||    
T  44762040 attgttttt 44762032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 69 - 238
Target Start/End: Complemental strand, 39842619 - 39842460
Alignment:
Q  69 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 168  Q
    |||| ||| |||||||||||||||||||||||||| |||||||||||||||  ||||||| |||||||||          | ||||||||||||||||||    
T  39842619 gtctcgtgatattcaaaatcattcaaatttcgaagaattgtttaataaattagattttgacggattttgt----------aatgtaattttaacaagaaa 39842530  T
Q  169 aagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatctttttcttctc 238  Q
    |||||||||||||||||||||||||||||| |||||||||| ||||||||||||| |||| |||||||||    
T  39842529 aagtctttcatgaaaagatgagatttcttgggattgtttttcttttaaaagttaccatctctttcttctc 39842460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 6 - 221
Target Start/End: Original strand, 44276397 - 44276598
Alignment:
Q  6 actctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaagga 105  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || ||       ||||  |||||||||||||||||||||||    ||||    
T  44276397 actctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcatcacttaaaaaaagtctcatggtattcaaaatcattcaaatt----agga 44276492  T
Q  106 ttgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgt 205  Q
    |||||||||||||||          |||||||||||||||| ||||| ||||||||||||||||| ||||||||||| | ||||||||| ||| |||| |    
T  44276493 ttgtttaataaattg----------gattttgtgggattttctagtgaaattttaacaagaaaaaatctttcatgaagacatgagattttttgggattat 44276582  T
Q  206 ttttattttaaaagtt 221  Q
    |||| |||||||||||    
T  44276583 ttttcttttaaaagtt 44276598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 11 - 209
Target Start/End: Original strand, 54625605 - 54625803
Alignment:
Q  11 ttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 110  Q
    ||||||||| |||||| |||||  |||||||||||||| | || | || ||       |||| |||||||||||||| ||||||||||||||||||||||    
T  54625605 ttgtcatttaaaaaaaatcttgttgtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaattattcaaatttcgaaggattgtt 54625704  T
Q  111 taataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 209  Q
    ||||||||   ||||||||||||||||||||||||| ||||| ||||||| || |||||||| ||||||||||| |||||||||||| |||||| ||||    
T  54625705 taataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtttttcatgaaaacatgagatttcttaagattgatttt 54625803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 69 - 209
Target Start/End: Complemental strand, 29448993 - 29448853
Alignment:
Q  69 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 168  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||| ||||  ||||||| ||  |||    
T  29448993 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtaaaattttagcataaaa 29448894  T
Q  169 aagtctttcatgaaaagatgagatttcttgagattgttttt 209  Q
    |||||||||||||||| ||||||||||||  ||||||||||    
T  29448893 aagtctttcatgaaaacatgagatttcttaggattgttttt 29448853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 194
Target Start/End: Original strand, 35337738 - 35337930
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||| || |||||||||||||||||||||| ||||||||||||||| | || | || ||       |||| |||||||||||||  ||||||||||||    
T  35337738 tcaagattccttgtcattttaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaaaaattcaaatttcg 35337837  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagattt 194  Q
    ||||||||||||||||||   ||||||||||||||||||||||||| ||||| ||||||| || |||||||| ||||||||||| |||||||||    
T  35337838 aaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagt-tttcatgaaaacatgagattt 35337930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 25418369 - 25418577
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||| |||||||||||| |||||||||||| ||||||||||||||| |||| | || ||        ||| | |||||||||||||||||||||||      
T  25418369 tcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagacttttaatcacttacaaaaaatctagcggtattcaaaatcattcaaatttga 25418468  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    ||||||||||||||||||   ||||||||||||||||||||||||| ||||| ||||||  || |||||||| ||||||||||| |||||||| |||  |    
T  25418469 aaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttggcatgaaaaagtatttcatgaaaacatgagattccttagg 25418568  T
Q  201 attgttttt 209  Q
    |||||||||    
T  25418569 attgttttt 25418577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 197
Target Start/End: Complemental strand, 33996744 - 33996548
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||| |||||||||||| |||||||||||| ||||||||||||||| | || | || ||        ||  |||||||||||||||||||||||||||    
T  33996744 tcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaatccagtggtattcaaaatcattcaaatttcg 33996645  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 197  Q
    ||||||||||||||||||   |||||||||||||||| |||||||| ||||| ||||||| || |||||||||||| || |||| ||||||||||||    
T  33996644 aaggattgtttaataaatcagattttgatggattttgagggattttctagtgaaattttagcatgaaaaagtcttttataaaaacatgagatttctt 33996548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 75 - 209
Target Start/End: Original strand, 5825139 - 5825273
Alignment:
Q  75 tggtattcaaaatcattcaaatttcgaaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtct 174  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| |||||||| |||||||||||||||| ||||| |||| || || ||||||| ||    
T  5825139 tggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatagattttgtgggattttttagtgaaattctagcatgaaaaaggct 5825238  T
Q  175 ttcatgaaaagatgagatttcttgagattgttttt 209  Q
    |||||||||| ||||||||||||  ||||||||||    
T  5825239 ttcatgaaaacatgagatttcttatgattgttttt 5825273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 53929331 - 53929123
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||| |||||||||||| |||||||||||| ||||||||||||||| | || | || ||       |||| |||||||||||||||||| |||| |||    
T  53929331 tcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcatttaaatatcg 53929232  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    || |||||||||||||||   ||||||||||||||||| ||||||| ||||| ||||||| || |||||| ||||| ||||||| ||||||||| ||  |    
T  53929231 aacgattgtttaataaataagattttgatggattttgtaggattttctagtgaaattttagcatgaaaaaatctttaatgaaaacatgagattttttagg 53929132  T
Q  201 attgttttt 209  Q
    |||||||||    
T  53929131 attgttttt 53929123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 22 - 132
Target Start/End: Complemental strand, 539586 - 539476
Alignment:
Q  22 aaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattga 121  Q
    |||||||||||||||||||||||||||||||||| |||||       ||||||||||||||||||||||||||||||||||||||| ||||||||||||     
T  539586 aaaaagtcttgaggtattcaatcaagatttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattatttaataaattgg 539487  T
Q  122 attttgatgga 132  Q
    |||||||||||    
T  539486 attttgatgga 539476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 3 - 196
Target Start/End: Original strand, 29030011 - 29030203
Alignment:
Q  3 aagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaa 102  Q
    ||||||||||||||||| |||||||||||| ||||||||||||||| | || | || ||       |||||||||||||||||||||||||||||| |||    
T  29030011 aagactctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaa-gtcttgtggtattcaaaatcattcaaattttgaa 29030109  T
Q  103 ggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 196  Q
    ||||||||||||||||   ||||||||||||||||||| ||||| || || |||||||||| |||    | ||| ||||||| |||||||||||    
T  29030110 ggattgtttaataaatcagattttgatggattttgtggaattttctaatgaaattttaacatgaattttttttttatgaaaacatgagatttct 29030203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 140 - 217
Target Start/End: Original strand, 45862983 - 45863060
Alignment:
Q  140 ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttattttaaa 217  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  45862983 ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttcttttaaa 45863060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 189
Target Start/End: Complemental strand, 51699682 - 51699495
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||| |||||||||||| |||||| ||||| ||||||||||||||| | || | || ||        ||| |||||||||||||||||||||||||||    
T  51699682 tcaagattctttgtcatttaaaaaaaatcttgtggtattcaatcaagactcttaatcacttaaaaaaa-tctagtggtattcaaaatcattcaaatttcg 51699584  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatga 189  Q
    |||||||| |||||||||   ||||||||| ||||||||||||||| ||||| ||||||| || |||||| |||||| |||||| ||||    
T  51699583 aaggattggttaataaataagattttgatgaattttgtgggattttctagtgaaattttagcatgaaaaaatctttcgtgaaaacatga 51699495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 2 - 197
Target Start/End: Original strand, 52114532 - 52114728
Alignment:
Q  2 caagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnn-gtcttgtggtattcaaaatcattcaaatttcg 100  Q
    ||||| |||||||||||| |||||||||||| ||||||||||||||| |||| | || ||        |||| |||||||||||||| ||||||||||||    
T  52114532 caagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagacttttaatcacttaaaaaaaagtctagtggtattcaaaataattcaaatttcg 52114631  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 197  Q
     |||||||||||||||||   |||||||| |||||||||| ||||| ||||  ||||||| || |||||| |||||  |||||| ||||||||||||    
T  52114632 caggattgtttaataaatcagattttgatagattttgtggaattttctagtaaaattttagcatgaaaaaatcttttgtgaaaacatgagatttctt 52114728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 3 - 234
Target Start/End: Complemental strand, 15493061 - 15492836
Alignment:
Q  3 aagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaa 102  Q
    |||||||||||||||||||||||||||||||||||||||||||| | |||||| || ||       ||||  ||||||||||||||||||||||||  ||    
T  15493061 aagactctttgtcattttaaaaaagtcttgaggtattcaatcaaaacttttcatcacttaaaaat-gtctcatggtattcaaaatcattcaaatttttaa 15492963  T
Q  103 ----ggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttg 198  Q
        | ||| ||||||||||||          |||||||| |||| || ||||| ||||||||||||||||| |||||||||||   || ||||||||||    
T  15492962 ttaagaattatttaataaattg----------gattttgtaggatattctagtgaaattttaacaagaaaaaatctttcatgaagtcataagatttcttg 15492873  T
Q  199 agattgtttttattttaaaag-ttactatctttttct 234  Q
    ||||||||||||||||||||| ||||||||| |||||    
T  15492872 agattgtttttattttaaaagtttactatctatttct 15492836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 74 - 169
Target Start/End: Original strand, 22057838 - 22057933
Alignment:
Q  74 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaa 169  Q
    |||||||| ||||||||||||||||||| ||||||||||||||||   ||||||||||||||||||||||||| ||||| |||||||||| |||||    
T  22057838 gtggtatttaaaatcattcaaatttcgatggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttaacatgaaaa 22057933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 6975752 - 6975868
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||| |||||| |||||       ||||||||||||||||||||||||||||||||    
T  6975752 tcaagactctttgttattttaaaa-agtcttgaggtattcaatcaagacttttcatcattt--aaaaagtcttgtggtattcaaaatcattcaaatttcg 6975848  T
Q  101 aaggattgtttaataaattg 120  Q
    ||| ||| |||| |||||||    
T  6975849 aagaattatttactaaattg 6975868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 122 - 209
Target Start/End: Complemental strand, 6131315 - 6131228
Alignment:
Q  122 attttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 209  Q
    ||||||||||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||  ||||||||||    
T  6131315 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgttttt 6131228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 1440156 - 1440010
Alignment:
Q  1 tcaagactctttgtcattttaaaaaa-gtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttc 99  Q
    |||||| |||||||||||| |||||| || ||| ||||||||||||||| | || | || ||       |||| ||||||||||||||||||||||||||    
T  1440156 tcaagattctttgtcatttaaaaaaaagttttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttc 1440057  T
Q  100 gaaggattgtttaataaattgaattttgatggattttgtgggatttt 146  Q
     ||||||||||||||||||   ||||||||||||||| |||||||||    
T  1440056 caaggattgtttaataaatcagattttgatggattttatgggatttt 1440010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 69 - 209
Target Start/End: Original strand, 27899415 - 27899545
Alignment:
Q  69 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 168  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||            |||||||| ||||||| ||||| ||||||| || ||||    
T  27899415 gtctggtggtattcaaaatcattcaaatttcgaaggattgtttaataaat----------cagattttgtaggattttctagtgaaattttagcatgaaa 27899504  T
Q  169 aagtctttcatgaaaagatgagatttcttgagattgttttt 209  Q
    |||||||||||||||| |||| |||||||  ||||||||||    
T  27899505 aagtctttcatgaaaacatgaaatttcttatgattgttttt 27899545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 3 - 98
Target Start/End: Original strand, 12103634 - 12103729
Alignment:
Q  3 aagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 98  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||| || ||       ||||  ||||||||||||||||||||||||    
T  12103634 aagattctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcatcacttaaaaaaagtctcatggtattcaaaatcattcaaattt 12103729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 93 - 209
Target Start/End: Complemental strand, 1440005 - 1439889
Alignment:
Q  93 aaatttcgaaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagat 192  Q
    |||||| ||||||||||||||||||||  |||||||| |||||||||||||||| ||||  ||||||   | |||||||||||||| ||||| |||||||    
T  1440005 aaatttggaaggattgtttaataaattagattttgatagattttgtgggattttctagtaaaattttggtatgaaaaagtctttcacgaaaacatgagat 1439906  T
Q  193 ttcttgagattgttttt 209  Q
    || ||  ||||||||||    
T  1439905 tttttaggattgttttt 1439889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 11 - 160
Target Start/End: Original strand, 55235198 - 55235347
Alignment:
Q  11 ttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtt 110  Q
    |||||||||||||||||||  ||||||||||||||| | | |||| || ||       ||||  || ||||||||||||||||||||||||| |||||||    
T  55235198 ttgtcattttaaaaaagtcacgaggtattcaatcaaaactcttcatcaattaaaaaa-gtctcatgatattcaaaatcattcaaatttcgaaagattgtt 55235296  T
Q  111 taataaattgaattttgatgga-ttttgtgggattttgtagtgtaatttta 160  Q
    ||||||||||  |||||||||| |||||||||||||| || || |||||||    
T  55235297 taataaattggtttttgatggatttttgtgggattttctaatgaaatttta 55235347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 18749573 - 18749627
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttca 55  Q
    |||||||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  18749573 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaaacttttca 18749627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 74 - 118
Target Start/End: Original strand, 52080003 - 52080047
Alignment:
Q  74 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaat 118  Q
    ||||||||||||||||||||||||| |||||||||||||||||||    
T  52080003 gtggtattcaaaatcattcaaattttgaaggattgtttaataaat 52080047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 69 - 119
Target Start/End: Complemental strand, 23535946 - 23535896
Alignment:
Q  69 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaatt 119  Q
    |||||||||||||||||||||||||||||| ||||||| ||||||| ||||    
T  23535946 gtcttgtggtattcaaaatcattcaaatttagaaggatcgtttaattaatt 23535896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 27240446 - 27240408
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtatt 39  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  27240446 tcaagactctttgtcattttaaaaaagttttgaggtatt 27240408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 154 - 206
Target Start/End: Complemental strand, 33807730 - 33807678
Alignment:
Q  154 aattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtt 206  Q
    ||||||| || |||||||||||||||||||| ||||||||||||  |||||||    
T  33807730 aattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtt 33807678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 6131374 - 6131327
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 48  Q
    ||||||||| ||||||||| |||||||| ||| |||||||||||||||    
T  6131374 tcaagactcattgtcatttaaaaaaagttttgtggtattcaatcaaga 6131327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 3206441 - 3206392
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 50  Q
    ||||||||||||   |||| |||||||||||| |||||||||||||||||    
T  3206441 tcaagactcttttcaatttaaaaaaagtcttgtggtattcaatcaagatt 3206392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 48
Target Start/End: Original strand, 6975712 - 6975757
Alignment:
Q  3 aagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 48  Q
    |||||||||||| | || |||||||||||| |||||||||||||||    
T  6975712 aagactctttgtaacttaaaaaaagtcttgtggtattcaatcaaga 6975757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 182
Target Start/End: Original strand, 12103733 - 12103774
Alignment:
Q  141 gattttgtagtgtaattttaacaagaaaaagtctttcatgaa 182  Q
    |||||| ||||| |||||||||||||| ||||||||||||||    
T  12103733 gattttctagtgaaattttaacaagaataagtctttcatgaa 12103774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 53
Target Start/End: Complemental strand, 19552187 - 19552150
Alignment:
Q  16 attttaaaaaagtcttgaggtattcaatcaagattttt 53  Q
    |||||| |||||||||| ||||||||||||||||||||    
T  19552187 attttataaaagtcttgtggtattcaatcaagattttt 19552150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 23753631 - 23753582
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 50  Q
    |||||||| ||||  |||| |||||||||||| |||||||||||||||||    
T  23753631 tcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagatt 23753582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 27899389 - 27899430
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaa 42  Q
    ||||||||||||||||||| |||||||||| | |||||||||    
T  27899389 tcaagactctttgtcatttaaaaaaagtctggtggtattcaa 27899430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 53
Target Start/End: Original strand, 26555860 - 26555896
Alignment:
Q  17 ttttaaaaaagtcttgaggtattcaatcaagattttt 53  Q
    ||||| |||||||||| ||||||||||||||||||||    
T  26555860 ttttataaaagtcttgtggtattcaatcaagattttt 26555896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 53
Target Start/End: Original strand, 27593198 - 27593234
Alignment:
Q  17 ttttaaaaaagtcttgaggtattcaatcaagattttt 53  Q
    ||||||||||||||| |||||||||||||||| ||||    
T  27593198 ttttaaaaaagtctttaggtattcaatcaagactttt 27593234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 53
Target Start/End: Original strand, 30588885 - 30588921
Alignment:
Q  17 ttttaaaaaagtcttgaggtattcaatcaagattttt 53  Q
    ||||| |||||||||| ||||||||||||||||||||    
T  30588885 ttttataaaagtcttgtggtattcaatcaagattttt 30588921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 53
Target Start/End: Complemental strand, 36055045 - 36055009
Alignment:
Q  17 ttttaaaaaagtcttgaggtattcaatcaagattttt 53  Q
    ||||| |||||||||| ||||||||||||||||||||    
T  36055045 ttttataaaagtcttgtggtattcaatcaagattttt 36055009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 53
Target Start/End: Original strand, 36786017 - 36786053
Alignment:
Q  17 ttttaaaaaagtcttgaggtattcaatcaagattttt 53  Q
    ||||||||||||||| |||||||||||||||| ||||    
T  36786017 ttttaaaaaagtctttaggtattcaatcaagactttt 36786053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 53
Target Start/End: Complemental strand, 38629838 - 38629802
Alignment:
Q  17 ttttaaaaaagtcttgaggtattcaatcaagattttt 53  Q
    ||||| |||||||||| ||||||||||||||||||||    
T  38629838 ttttataaaagtcttgtggtattcaatcaagattttt 38629802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 53
Target Start/End: Original strand, 38682472 - 38682508
Alignment:
Q  17 ttttaaaaaagtcttgaggtattcaatcaagattttt 53  Q
    |||||||||| ||||| ||||||||||||||||||||    
T  38682472 ttttaaaaaaatcttgtggtattcaatcaagattttt 38682508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 44276352 - 44276392
Alignment:
Q  3 aagactctttgtcattttaaaaaagtcttgaggtattcaat 43  Q
    |||||||||||| |||| |||||||||||| ||||||||||    
T  44276352 aagactctttgtaatttaaaaaaagtcttgtggtattcaat 44276392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 53
Target Start/End: Complemental strand, 50900485 - 50900449
Alignment:
Q  17 ttttaaaaaagtcttgaggtattcaatcaagattttt 53  Q
    ||||| |||||||||| ||||||||||||||||||||    
T  50900485 ttttataaaagtcttgtggtattcaatcaagattttt 50900449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 21 - 53
Target Start/End: Complemental strand, 52024233 - 52024201
Alignment:
Q  21 aaaaaagtcttgaggtattcaatcaagattttt 53  Q
    |||||||||||| ||||||||||||||||||||    
T  52024233 aaaaaagtcttgtggtattcaatcaagattttt 52024201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 53
Target Start/End: Complemental strand, 53184111 - 53184075
Alignment:
Q  17 ttttaaaaaagtcttgaggtattcaatcaagattttt 53  Q
    |||||||||||||| | ||||||||||||||||||||    
T  53184111 ttttaaaaaagtctcgtggtattcaatcaagattttt 53184075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 198; Significance: 1e-108; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 31895699 - 31895937
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||| |||||| |||||       ||||||||||||||||||||||||||||||||    
T  31895699 tcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcg 31895798  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31895799 aaggattgtttaataaattggattttgatggattttgtgggattttctagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 31895898  T
Q  201 attgtttttattttaaaagttactatctttttcttctca 239  Q
    |||||||||||||||||||||||||||||||||||||||    
T  31895899 attgtttttattttaaaagttactatctttttcttctca 31895937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 14262635 - 14262412
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||       ||||||||||||||||||||||| ||||||||    
T  14262635 tcaagactctttgtcatttttaaaaagtcttgaggtattcaatcaagatttttcatcatttaaaaaaagtcttgtggtattcaaaatcatttaaatttcg 14262536  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  14262535 aaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgggatttcttgag 14262436  T
Q  201 attgtttttattttaaaagttact 224  Q
    ||||||||| ||||||||||||||    
T  14262435 attgtttttcttttaaaagttact 14262412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 34759253 - 34759025
Alignment:
Q  1 tcaagactctttgtcattttaaaaaa-gtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttc 99  Q
    |||||||||||||||||||||||||| ||||||| |||||||||||||| |||||| || ||       |||||||||||||||||||||||||||||||    
T  34759253 tcaagactctttgtcattttaaaaaaagtcttgaagtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttc 34759154  T
Q  100 gaaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttga 199  Q
     |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  34759153 caaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaaatctttcatgaaaagatgagatttcttga 34759054  T
Q  200 gattgtttttattttaaaagttactatct 228  Q
    |||| ||||| ||||||||||||||||||    
T  34759053 gattatttttcttttaaaagttactatct 34759025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 34773412 - 34773639
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||        |||||||||||||||||||||||||||||||    
T  34773412 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaaatcttgtggtattcaaaatcattcaaatttcg 34773511  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    |||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||         
T  34773512 aaggattgtttaataaattggattttgatggattttgtgggattttgcagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttc----- 34773606  T
Q  201 attgtttttattttaaaagttactatctttttcttctca 239  Q
          |||||||||||||||||||||||||||||||||    
T  34773607 ------tttattttaaaagttactatctttttcttctca 34773639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 21 - 238
Target Start/End: Original strand, 7497099 - 7497315
Alignment:
Q  21 aaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattg 120  Q
    |||||||||||| |||||||||||||||||||||| || ||       ||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  7497099 aaaaaagtcttgtggtattcaatcaagatttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggagtgtttaataaattg 7497198  T
Q  121 aattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagt 220  Q
     ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||    
T  7497199 gattttgatggattttgtgg-attttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattatttttcttttaaaagt 7497297  T
Q  221 tactatctttttcttctc 238  Q
    |||||||| ||| |||||    
T  7497298 tactatctctttattctc 7497315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 30385259 - 30385034
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||||||||||||||||||||||||| ||||||||||||||||| | |||||| || ||       ||||||||||||||||||||||||||||||||    
T  30385259 tcaagactctttgtcattttaaaaaagtattgaggtattcaatcaaaaattttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcg 30385160  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    ||||||||||||||||||||          |||||||||||||||||||||||||||||||||| |||  ||||||||||||||||||||||||||||||    
T  30385159 aaggattgtttaataaattg----------gattttgtgggattttgtagtgtaattttaacaacaaa--gtctttcatgaaaagatgagatttcttgag 30385072  T
Q  201 attgtttttattttaaaagttactatctttttcttctc 238  Q
    ||||||||| |||||||| ||||||||| |||||||||    
T  30385071 attgtttttcttttaaaaattactatctctttcttctc 30385034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 72 - 236
Target Start/End: Original strand, 31067567 - 31067721
Alignment:
Q  72 ttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaag 171  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||||    
T  31067567 ttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattg----------gattttgtgggattttgtagtgtaattttaacaagaaaaag 31067656  T
Q  172 tctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatctttttcttc 236  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31067657 tctttcataaaaagatgagatttcttgagattgtttttattttaaaagttactatctttttcttc 31067721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 89 - 239
Target Start/End: Complemental strand, 4200541 - 4200401
Alignment:
Q  89 attcaaatttcgaaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatg 188  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||    
T  4200541 attcaaatttcgaaggattgtttaataaattggattttgatggattttgt----------agtgtaattttaacaagaaaaagtctttcatgaaaagatg 4200452  T
Q  189 agatttcttgagattgtttttattttaaaagttactatctttttcttctca 239  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4200451 agatttcttgagattgtttttattttaaaagttactatctttttcttctca 4200401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 6197680 - 6197472
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||| |||||||||||| |||||||||||| ||||||||||||||| | || | || ||       |||| |||||||||||||||||||||||||||    
T  6197680 tcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcg 6197581  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    ||||||||||||||||||   ||||||||||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||  |    
T  6197580 aaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttagg 6197481  T
Q  201 attgttttt 209  Q
    |||||||||    
T  6197480 attgttttt 6197472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 197
Target Start/End: Complemental strand, 2300940 - 2300744
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||| |||||||||||| |||||||||||| ||||||||||||||| | || | || ||       ||||  ||||||| ||||||||||||||||||    
T  2300940 tcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttgatcacttaaaaaaagtctactggtattgaaaatcattcaaatttcg 2300841  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 197  Q
    ||||||||||||||||||   ||||||||||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||    
T  2300840 aaggattgtttaataaataagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 2300744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 1391627 - 1391835
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||| || ||||||||| || ||||||||| ||||||||||||||| | || | || ||       |||| ||||||||||||||||||||||||| |    
T  1391627 tcaagattcattgtcatttaaataaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttgg 1391726  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    ||||||||||||||||||   ||||||||||||||||||||||||| ||||| ||||||  || |||||||||||||||||||| |||||||| |||  |    
T  1391727 aaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttggcatgaaaaagtctttcatgaaaacatgagattccttagg 1391826  T
Q  201 attgttttt 209  Q
    |||||||||    
T  1391827 attgttttt 1391835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 197
Target Start/End: Original strand, 7051848 - 7052044
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||| |||||||||||| |||||||||||| ||||| ||||||||| | |||| || ||       ||| |||| |||||||||||||||||||||||    
T  7051848 tcaagattctttgtcatttaaaaaaagtcttgtggtatacaatcaagactcttcatcacttaaaaaaagtcgtgtgatattcaaaatcattcaaatttcg 7051947  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 197  Q
    |||||||||||||||||||| ||||||||||||||||| ||||||| ||||  ||||||| || |||||||| |||||| |||  ||||||||||||    
T  7051948 aaggattgtttaataaattggattttgatggattttgtaggattttctagtaaaattttagcatgaaaaagtttttcataaaatcatgagatttctt 7052044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 29076601 - 29076810
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnn-gtcttgtggtattcaaaatcattcaaatttc 99  Q
    |||||| |||||||||||| |||||||||||| ||||||||||| ||||| || | || ||        |||| || |||||||||||||||||||||||    
T  29076601 tcaagattctttgtcatttaaaaaaagtcttgtggtattcaatctagattcttaatcacttaaaaaaaagtctagtagtattcaaaatcattcaaatttc 29076700  T
Q  100 gaaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttga 199  Q
    |||||||||||||||||||   ||||||||||||||| | ||||||| ||||| ||||||| || |||||| |||||||| |||| ||||||||| ||      
T  29076701 gaaggattgtttaataaatcagattttgatggattttataggattttctagtgaaattttagcatgaaaaaatctttcataaaaacatgagattttttag 29076800  T
Q  200 gattgttttt 209  Q
    ||||||||||    
T  29076801 gattgttttt 29076810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 29111574 - 29111784
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnn--gtcttgtggtattcaaaatcattcaaattt 98  Q
    |||||| |||||||||||| |||||||||||| ||||||||||| ||||| || | || ||         |||| || ||||||||||||||||||||||    
T  29111574 tcaagattctttgtcatttaaaaaaagtcttgtggtattcaatctagattcttaatcacttaaaaaaaaagtctagtagtattcaaaatcattcaaattt 29111673  T
Q  99 cgaaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttg 198  Q
    ||||||||||||||||||||   ||||||||||||||| | ||||||| ||||| ||||||| || |||||| |||||||| |||| ||||||||| ||     
T  29111674 cgaaggattgtttaataaatcagattttgatggattttataggattttctagtgaaattttagcatgaaaaaatctttcataaaaacatgagatttttta 29111773  T
Q  199 agattgttttt 209  Q
     ||||||||||    
T  29111774 ggattgttttt 29111784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 189
Target Start/End: Original strand, 28002668 - 28002856
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||| | |||||||||| |||||||||||  ||||||||||||||| | || | || ||       |||| ||| ||||||||||||||||||||| |    
T  28002668 tcaagattttttgtcatttaaaaaaagtcttctggtattcaatcaagactcttaatcacttaaaaaaagtctagtgatattcaaaatcattcaaatttgg 28002767  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatga 189  Q
    ||||||||||||||||||   ||||||||||||||||||  ||||| ||||| ||||||| || |||||||||||||||||||| ||||    
T  28002768 aaggattgtttaataaatcagattttgatggattttgtgaaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatga 28002856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 72 - 137
Target Start/End: Original strand, 3848284 - 3848348
Alignment:
Q  72 ttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgaattttgatggattttg 137  Q
    |||||||||||||||||||| |||||| ||| |||||||||||||||||||||||| |||||||||    
T  3848284 ttgtggtattcaaaatcatttaaattttgaatgattgtttaataaattgaattttg-tggattttg 3848348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 165 - 209
Target Start/End: Original strand, 2238678 - 2238722
Alignment:
Q  165 gaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 209  Q
    |||||| ||||||||||||| |||||||||||| |||||||||||    
T  2238678 gaaaaaatctttcatgaaaacatgagatttcttaagattgttttt 2238722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 53
Target Start/End: Complemental strand, 10644052 - 10644016
Alignment:
Q  17 ttttaaaaaagtcttgaggtattcaatcaagattttt 53  Q
    ||||||||||||||| |||||||||||||||| ||||    
T  10644052 ttttaaaaaagtctttaggtattcaatcaagactttt 10644016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 53
Target Start/End: Original strand, 30877898 - 30877934
Alignment:
Q  17 ttttaaaaaagtcttgaggtattcaatcaagattttt 53  Q
    ||||||||||||||| |||||||||||||||| ||||    
T  30877898 ttttaaaaaagtctttaggtattcaatcaagactttt 30877934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 198; Significance: 1e-108; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 14000307 - 14000069
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| |||||| |||||       |||||||||||||||||||||||||||||| |    
T  14000307 tcaagactctttgtcatttttaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaattttg 14000208  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14000207 aaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 14000108  T
Q  201 attgtttttattttaaaagttactatctttttcttctca 239  Q
    |||||||||||||||||||||||||||||||||||||||    
T  14000107 attgtttttattttaaaagttactatctttttcttctca 14000069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 181; E-Value: 8e-98
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 13925935 - 13926172
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||  | ||       ||||||||||||||||||||||||||||||||    
T  13925935 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcg 13926034  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||    
T  13926035 aaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcaagaaaagatgatatttcttgag 13926134  T
Q  201 attgtttttattttaaaagttactatctttttcttctc 238  Q
    ||||||||| || ||||||||||||||| |||||||||    
T  13926135 attgtttttcttctaaaagttactatctctttcttctc 13926172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 1152305 - 1152068
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||| | || ||       ||||||||||||||||||||||||||||||||    
T  1152305 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactttttatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcg 1152206  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    | |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  1152205 agggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtcttttatgaaaagatgagatttcttaag 1152106  T
Q  201 attgtttttattttaaaagttactatctttttcttctc 238  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  1152105 attgtttttcttttaaaagttactatctctttcttctc 1152068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 7947775 - 7947538
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||| || ||       |||||| | |||||||||||||||||||||||    
T  7947775 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgcgatattcaaaatcattcaaatttcg 7947676  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    |||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||     
T  7947675 aaggattgtttaataaattggattttgatggattttgtggaattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagaagagatttcttgaa 7947576  T
Q  201 attgtttttattttaaaagttactatctttttcttctc 238  Q
    ||||||||| |||||||||||| ||||| |||||||||    
T  7947575 attgtttttcttttaaaagttaatatctctttcttctc 7947538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 24 - 234
Target Start/End: Original strand, 39852372 - 39852582
Alignment:
Q  24 aaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgaat 123  Q
    ||||||||||||||||||||||||| || ||| |||||       |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||    
T  39852372 aaagtcttgaggtattcaatcaagacttctcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttactaaattggat 39852471  T
Q  124 tttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttac 223  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  39852472 tttgatggattttatgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttgttttaaaagttac 39852571  T
Q  224 tatctttttct 234  Q
    ||||| |||||    
T  39852572 tatctctttct 39852582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 4550459 - 4550246
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||||||||||||||||||| |||| |||||||||||||||||||| |||||| || ||       ||||||||||||||||||||||||||||||||    
T  4550459 tcaagactctttgtcattttaacaaaggcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcg 4550360  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    |||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||    
T  4550359 aaggattgtttaataaattggattttgatggattttgtggaattttgtagtgtaattttaacaagaaagagtctttcatgaaaagatgagatttgttgag 4550260  T
Q  201 attgtttttatttt 214  Q
    ||||||||| ||||    
T  4550259 attgtttttttttt 4550246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 4240654 - 4240433
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||| || ||       ||||||||||||||||||||||||||||||||    
T  4240654 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcg 4240555  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    |||||||||||||||||||| |||||||||||||||||          |||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  4240554 aaggattgtttaataaattggattttgatggattttgt----------agtgtaattttaacaagaaaaagtctttcatgaatagatgagatttcttgag 4240465  T
Q  201 attgtttttattttaaaagttactatcttttt 232  Q
    ||||||||| ||||||||||||||||||||||    
T  4240464 attgtttttcttttaaaagttactatcttttt 4240433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 5949113 - 5949339
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||| || ||        |||||||||||||||||||||||||||||||    
T  5949113 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaaatttttcatcacttaaaaaaa-tcttgtggtattcaaaatcattcaaatttcg 5949211  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    |||||||||||||||||||| ||||||||||||          |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5949212 aaggattgtttaataaattggattttgatggat----------tttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 5949301  T
Q  201 attgtttttattttaaaagttactatctttttcttctc 238  Q
    ||||||||| |||||||||||| ||||| ||| |||||    
T  5949302 attgtttttcttttaaaagttattatctctttattctc 5949339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 40013904 - 40013687
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||        ||||||| |||||||||||||||||||||||    
T  40013904 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaaatcttgtgttattcaaaatcattcaaatttcg 40013805  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    |||||||||||||| ||||| ||||| |||||||||||          ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40013804 aaggattgtttaatcaattggattttaatggattttgt----------agtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 40013715  T
Q  201 attgtttttattttaaaagttactatct 228  Q
    ||||||||| |||| |||||||||||||    
T  40013714 attgtttttgtttttaaagttactatct 40013687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 1461340 - 1461113
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||| |||||| || ||       |||||| | |||||||||||||||||||||||    
T  1461340 tcaagactctttgtaattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgcgctattcaaaatcattcaaatttcg 1461241  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    |||||||||||||||||||| |||||||||||||||||          | |||||||||||||||||||| |||||||||||||||||||||||||||||    
T  1461240 aaggattgtttaataaattggattttgatggattttgt----------actgtaattttaacaagaaaaaatctttcatgaaaagatgagatttcttgag 1461151  T
Q  201 attgtttttattttaaaagttactatctttttcttctc 238  Q
    ||||||||| |||||||||||||||| | |||||||||    
T  1461150 attgtttttcttttaaaagttactatatctttcttctc 1461113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 22746301 - 22746501
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| | |||||| || ||       |||||||| |||||||||||||||||||||||    
T  22746301 tcaaaactctttgtcattttaaaaaagtcttgaggtattcaatcaaaacttttcatcacttaaaaaaagtcttgtgatattcaaaatcattcaaatttcg 22746400  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    || |||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||| |||||||||||||||| ||||||||| ||    
T  22746401 aatgattgtttaataaattgaattttgatggattttgtggga--------tgtaattttaacaagaaaaactctttcatgaaaagataagatttcttaag 22746492  T
Q  201 attgttttt 209  Q
    |||||||||    
T  22746493 attgttttt 22746501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 21147071 - 21147279
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||| |||||||||||| |||||||||||| ||||||||||||||| | || | || ||       |||| |||||||||||||||||||||||||||    
T  21147071 tcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcg 21147170  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    ||||||||||||||||||   ||||||||||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||  |    
T  21147171 aaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttagg 21147270  T
Q  201 attgttttt 209  Q
    |||||||||    
T  21147271 attgttttt 21147279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 37013918 - 37014124
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| |||||| || ||       |||||| |||||||||||||||||||||||||    
T  37013918 tcaagactctttgtcatttttaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgcggtattcaaaatcattcaaatttcg 37014017  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    |||| |||||||||||||||                    ||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  37014018 aagggttgtttaataaattg--------------------gattttgtagtataattttaacaagaaaaagtctttcataaaaagatgagatttcttgag 37014097  T
Q  201 attgtttttattttaaaagttactatc 227  Q
    ||||||||| |||||||||||||||||    
T  37014098 attgtttttcttttaaaagttactatc 37014124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 197
Target Start/End: Complemental strand, 5273121 - 5272925
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||| |||||||||||| |||||||||||  ||||||||||||||| | || | |||||       |||| |||||||||||||||||||||||||||    
T  5273121 tcaagattctttgtcatttaaaaaaagtcttatggtattcaatcaagactcttaatcatttaaaaaaagtctagtggtattcaaaatcattcaaatttcg 5273022  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 197  Q
    || |||||||||||||||   ||||||||||||||||||||||||| ||||| ||||||| || ||||||||||||||| |||| ||||||||||||    
T  5273021 aatgattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcataaaaacatgagatttctt 5272925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 10 - 209
Target Start/End: Complemental strand, 33656234 - 33656035
Alignment:
Q  10 tttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgt 109  Q
    |||||||||| |||||||||||| ||||||||||||||| | || | || ||        |||  |||||||||||||||||||||||||||||||||||    
T  33656234 tttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaatctaatggtattcaaaatcattcaaatttcgaaggattgt 33656135  T
Q  110 ttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 209  Q
    |||||||||   ||||||||||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||  ||||||||||    
T  33656134 ttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaatatgagatttcttaggattgttttt 33656035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 197
Target Start/End: Original strand, 139277 - 139473
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||| |||||||||||| ||||||||| || ||||||||||||||| |||| | || ||       |||| |||||||||||||||||||||||||||    
T  139277 tcaagattctttgtcatttaaaaaaagtcatgtggtattcaatcaagacttttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcg 139376  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 197  Q
    |||||||||||||||||    ||||||||||||||||| |||||||  |||| |||||||| | ||||||||||||||| |||| ||||||||||||    
T  139377 aaggattgtttaataaaccagattttgatggattttgttggattttccagtgaaattttaatatgaaaaagtctttcataaaaacatgagatttctt 139473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 197
Target Start/End: Complemental strand, 7016941 - 7016745
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    ||||||||||||   |||| ||||||||||||  |||||||||||||| | || | || ||       |||| |||||||||||||||||||||||||||    
T  7016941 tcaagactcttttcaatttaaaaaaagtcttgtagtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcg 7016842  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 197  Q
    ||||||||||||||||||   ||||||||||||||||||||||||| ||||| ||||||| || ||||||||||||||| |||| ||||||||||||    
T  7016841 aaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcataaaaacatgagatttctt 7016745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 3 - 209
Target Start/End: Complemental strand, 27459149 - 27458944
Alignment:
Q  3 aagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaa 102  Q
    |||| |||||||||||| ||||||||||||  |||||||||||||| | || | || ||       |||| |||||||||||||||||||| |||| |||    
T  27459149 aagattctttgtcatttaaaaaaagtcttgtagtattcaatcaagactcttaatcacttaaaaaa-gtctagtggtattcaaaatcattcagattttgaa 27459051  T
Q  103 ggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagat 202  Q
    |||||||||||||||||  ||||||||||||||||||||||||| ||||| ||||||| || |||||| || |||||||||| |||| |||||||  |||    
T  27459050 ggattgtttaataaattagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaaatcattcatgaaaacatgatatttcttaggat 27458951  T
Q  203 tgttttt 209  Q
    |||||||    
T  27458950 tgttttt 27458944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 32158100 - 32157891
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcacca-tttnnnnnnngtcttgtggtattcaaaatcattcaaatttc 99  Q
    |||||| |||||||||||| |||||||||||| |||||||||||||||    | | || ||        |||| ||||||||||||||||||||||||||    
T  32158100 tcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagacccctaatcacttaaaaaaaagtctagtggtattcaaaatcattcaaatttc 32158001  T
Q  100 gaaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaa---agtctttcatgaaaagatgagatttct 196  Q
    ||||||||||||||||||||  ||||||| ||||||||||||||||| ||||  ||||||| || |||||   ||||||||||||||| |||||||||||    
T  32158000 gaaggattgtttaataaattagattttgacggattttgtgggattttctagtaaaattttagcacgaaaaaatagtctttcatgaaaacatgagatttct 32157901  T
Q  197 tgagattgtt 206  Q
    | | ||||||    
T  32157900 taaaattgtt 32157891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 75 - 184
Target Start/End: Original strand, 849225 - 849334
Alignment:
Q  75 tggtattcaaaatcattcaaatttcgaaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtct 174  Q
    ||||||||||||||||||||||||||||||||||||||||||||   |||||||| |||||||||||||||| ||||| ||||||| || ||||||||||    
T  849225 tggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaaagtct 849324  T
Q  175 ttcatgaaaa 184  Q
    ||||||||||    
T  849325 ttcatgaaaa 849334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 14465429 - 14465279
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    ||||||||||||||||||| |||||||| ||  ||||||||||||||| | |||| |  ||       ||||||||||||||||||||||||||||||||    
T  14465429 tcaagactctttgtcatttaaaaaaagttttctggtattcaatcaagactcttcatcgcttaaaaaaagtcttgtggtattcaaaatcattcaaatttcg 14465330  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagt 151  Q
    || ||||||||||||||| | ||||||||| ||||||||| ||||| ||||    
T  14465329 aaagattgtttaataaatcggattttgatgaattttgtggaattttctagt 14465279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 6460796 - 6460965
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||| |||||||||||| ||||||||| ||  |||||||||||||| | || | |||||        ||| |||||||||||||||||||||||||||    
T  6460796 tcaagattctttgtcatttaaaaaaagtcatgtcgtattcaatcaagactcttaatcatttaaaaaaaatctagtggtattcaaaatcattcaaatttcg 6460895  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaa 170  Q
    |||| |||||||||||||   |||||||||||||||| |||||||| ||||| ||||||| || ||||||    
T  6460896 aaggtttgtttaataaatcagattttgatggattttgagggattttctagtgaaattttatcatgaaaaa 6460965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 69 - 209
Target Start/End: Original strand, 9689730 - 9689869
Alignment:
Q  69 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 168  Q
    ||||||||||||| ||||||||| |||||||||| |||||||| |||||||  ||||||||||||| |||| |||||| | ||  |||||||  | ||||    
T  9689730 gtcttgtggtatttaaaatcatt-aaatttcgaatgattgtttgataaattagattttgatggattgtgtgagattttcttgtaaaattttattatgaaa 9689828  T
Q  169 aagtctttcatgaaaagatgagatttcttgagattgttttt 209  Q
    ||||||||||| |||| || |||||||||  ||||||||||    
T  9689829 aagtctttcataaaaacataagatttcttatgattgttttt 9689869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 9220909 - 9220711
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||| ||||||||||||||  ||||||||||| | ||||||||||||| | || | || ||       ||||| || ||||||||||||||||||||||     
T  9220909 tcaaaactctttgtcatttagaaaaagtcttgtgatattcaatcaagactctttatcacttaaaaaaagtcttatgatattcaaaatcattcaaatttct 9220810  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    |||||||||||||| ||||           || ||||| ||||||| ||||  |||||||||| ||||||||||||| |||||| |||| |||||||  |    
T  9220809 aaggattgtttaatgaatta----------gaatttgtaggattttatagtaaaattttaacacgaaaaagtctttcgtgaaaacatgatatttcttagg 9220720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 53
Target Start/End: Original strand, 17518474 - 17518510
Alignment:
Q  17 ttttaaaaaagtcttgaggtattcaatcaagattttt 53  Q
    |||||||||||||||| ||||||||||||||||||||    
T  17518474 ttttaaaaaagtcttgtggtattcaatcaagattttt 17518510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 5273163 - 5273114
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 50  Q
    |||||| | |||||||||| |||||||||||| | |||||||||||||||    
T  5273163 tcaagattttttgtcatttaaaaaaagtcttgtgctattcaatcaagatt 5273114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 53
Target Start/End: Complemental strand, 9689371 - 9689338
Alignment:
Q  20 taaaaaagtcttgaggtattcaatcaagattttt 53  Q
    ||||||| ||||||||||||||||||||||||||    
T  9689371 taaaaaaatcttgaggtattcaatcaagattttt 9689338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 53
Target Start/End: Complemental strand, 28594477 - 28594444
Alignment:
Q  20 taaaaaagtcttgaggtattcaatcaagattttt 53  Q
    ||||||||||||| ||||||||||||||||||||    
T  28594477 taaaaaagtcttgtggtattcaatcaagattttt 28594444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 53
Target Start/End: Original strand, 40410636 - 40410672
Alignment:
Q  17 ttttaaaaaagtcttgaggtattcaatcaagattttt 53  Q
    ||||| |||||||||| ||||||||||||||||||||    
T  40410636 ttttataaaagtcttgtggtattcaatcaagattttt 40410672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0543 (Bit Score: 181; Significance: 8e-98; HSPs: 1)
Name: scaffold0543
Description:

Target: scaffold0543; HSP #1
Raw Score: 181; E-Value: 8e-98
Query Start/End: Original strand, 1 - 234
Target Start/End: Original strand, 10564 - 10797
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| || ||| |||||        ||||||||||||||||||||||||||||||     
T  10564 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttctcatcatttaaaaaaaatcttgtggtattcaaaatcattcaaatttca 10663  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10664 aaggattgtttaataaattgaattttgatggattttatgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 10763  T
Q  201 attgtttttattttaaaagttactatctttttct 234  Q
    ||||||||| |||||||||||||||||| |||||    
T  10764 attgtttttgttttaaaagttactatctctttct 10797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 181; Significance: 8e-98; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 181; E-Value: 8e-98
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 18177272 - 18177501
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||       || |||||||||||||||||||||||||||||    
T  18177272 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagttttgtggtattcaaaatcattcaaatttcg 18177371  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  18177372 aaggattgtttaattaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttaataaaaagatgagatttcttgag 18177471  T
Q  201 attgtttttattttaaaagttactatcttt 230  Q
    ||||||||||||||||||||||||||||||    
T  18177472 attgtttttattttaaaagttactatcttt 18177501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 26788789 - 26789026
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnn--gtcttgtggtattcaaaatcattcaaattt 98  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||          ||||||||||||||||||||||||||||||    
T  26788789 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcattcaaaaaaaaagtcttgtggtattcaaaatcattcaaattt 26788888  T
Q  99 cgaaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttg 198  Q
     ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||    
T  26788889 tgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcat---aagatgagatttcttg 26788985  T
Q  199 agattgtttttattttaaaagttactatctttttcttctca 239  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  26788986 agattgtttttattttaaaagttactatctttttcttctca 26789026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 173; E-Value: 5e-93
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 28844560 - 28844797
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||| || ||       ||||||||||||||||||||||||||||||||    
T  28844560 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcg 28844659  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    |||||||||||||||||||  ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  28844660 aaggattgtttaataaattagattttgatggattttgtggaattttgtagtgtaattttaataagaaaaagtctttcataaaaagatgagatttcttgag 28844759  T
Q  201 attgtttttattttaaaagttactatctttttcttctc 238  Q
    ||||||||| |||||||||||| ||||| |||||||||    
T  28844760 attgtttttcttttaaaagttagtatctatttcttctc 28844797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 173; E-Value: 5e-93
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 33135628 - 33135864
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||| || ||       |||| |||||||||||||||||||||||||||    
T  33135628 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtctcgtggtattcaaaatcattcaaatttcg 33135727  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||    
T  33135728 aaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcat-aaaaaatgagatttcttgag 33135826  T
Q  201 attgtttttattttaaaagttactatctttttcttctc 238  Q
    ||||||||| |||||||||||| ||||| |||||||||    
T  33135827 attgtttttcttttaaaagttattatctctttcttctc 33135864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 25288164 - 25288401
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||| |||||| || ||        |||||||||||||||||||||||||||||||    
T  25288164 tcaagactctttgtcattttaaaaaagtcttgaggtattcattcaagacttttcatcacttaaaaaaaatcttgtggtattcaaaatcattcaaatttcg 25288263  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||    
T  25288264 aaggattgtttaataaattggattttgatgaattttgtgggattttgtagtgtaattttaacaagagaacgtctttcatgaaaagatgagatttcttgag 25288363  T
Q  201 attgtttttattttaaaagttactatctttttcttctc 238  Q
    ||||||||| |||||||||||||||| | |||||||||    
T  25288364 attgtttttcttttaaaagttactatatatttcttctc 25288401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 9 - 238
Target Start/End: Original strand, 10657419 - 10657648
Alignment:
Q  9 ctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattg 108  Q
    |||||||||||||||||||| ||||||||||||||||||| |||||| || ||       |||||||||||||||||||||||||||||||||| |||||    
T  10657419 ctttgtcattttaaaaaagttttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaatgattg 10657518  T
Q  109 tttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttt 208  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  10657519 tttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgaaatttcttgagattgtttt 10657618  T
Q  209 tattttaaaagttactatctttttcttctc 238  Q
    | ||||||||| |||||||| |||||||||    
T  10657619 tcttttaaaaggtactatctctttcttctc 10657648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 144; E-Value: 9e-76
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 28740488 - 28740275
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||| || ||       ||||||||||||||||||||||||||||||||    
T  28740488 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcg 28740389  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    |||||||||||||||||||| |||||||||||||||||||          ||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  28740388 aaggattgtttaataaattggattttgatggattttgtgg----------tgtaattttaacaagaaaaagtctttcataaaaagatgagatttcttgag 28740299  T
Q  201 attgtttttattttaaaagttact 224  Q
    ||||||||| ||||||||||||||    
T  28740298 attgtttttcttttaaaagttact 28740275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 6 - 228
Target Start/End: Original strand, 3463682 - 3463894
Alignment:
Q  6 actctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaagga 105  Q
    ||||||||||||||||||||||||||||||| ||||||||||| |||||| |||||       ||||||||||||| |||||||||||| |||| |||||    
T  3463682 actctttgtcattttaaaaaagtcttgaggtgttcaatcaagacttttcatcatttaaaaaaagtcttgtggtatttaaaatcattcaattttcaaagga 3463781  T
Q  106 ttgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgt 205  Q
    ||||||||||||||| ||||||||          ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  3463782 ttgtttaataaattggattttgat----------ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaatatgagatttcttgagattgt 3463871  T
Q  206 ttttattttaaaagttactatct 228  Q
    |||| ||||||||||||||||||    
T  3463872 ttttgttttaaaagttactatct 3463894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 13833627 - 13833401
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||||| ||| ||||||||||||||||||||  ||||||||||||| |||||| || ||       ||||| |||||||||||||||||||||||| |    
T  13833627 tcaagactttttatcattttaaaaaagtcttgatatattcaatcaagacttttcatcacttaaaaaaagtcttctggtattcaaaatcattcaaattttg 13833528  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    ||||||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  13833527 aaggattgtttaataaattg----------gattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgacaagatgagatttcttgag 13833438  T
Q  201 attgtttttattttaaaagttactatctttttcttct 237  Q
    |||| |||| |||||||| ||||||||| ||||||||    
T  13833437 attgcttttcttttaaaaattactatctctttcttct 13833401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 6224753 - 6224535
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcacca-tttnnnnnnngtcttgtggtattcaaaatcattcaaatttc 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||       ||||||||||||||||||| |||||||||||    
T  6224753 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcatcactttaaaaaaagtcttgtggtattcaaaattattcaaatttc 6224654  T
Q  100 gaaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttga 199  Q
    |||||||| ||||||||||||                    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6224653 gaaggattatttaataaattg--------------------gattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttga 6224574  T
Q  200 gattgtttttattttaaaagttactatctttttcttctc 238  Q
     ||||||||| |||||||||||||||||| |||||||||    
T  6224573 tattgtttttcttttaaaagttactatctctttcttctc 6224535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 86 - 238
Target Start/End: Original strand, 43078653 - 43078805
Alignment:
Q  86 atcattcaaatttcgaaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaag 185  Q
    ||||||||||||||||| ||||||||||||||||| ||||| ||||||||||||||||||| |||||||||||||||| ||||||||||||||| |||||    
T  43078653 atcattcaaatttcgaatgattgtttaataaattggattttcatggattttgtgggattttatagtgtaattttaacatgaaaaagtctttcataaaaag 43078752  T
Q  186 atgagatttcttgagattgtttttattttaaaagttactatctttttcttctc 238  Q
    || ||||||||||||||||||||| |||||||||||| ||||| |||||||||    
T  43078753 ataagatttcttgagattgtttttgttttaaaagttagtatctctttcttctc 43078805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 16269696 - 16269904
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||| |||||||||||| |||||||||||| ||||||||||||||| | || | || ||       |||| |||||||||||||||||||||||||||    
T  16269696 tcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcg 16269795  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    ||||||||||||||||||   ||||||||||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||  |    
T  16269796 aaggattgtttaataaatcagattttgatggattttgtgggattttatagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttagg 16269895  T
Q  201 attgttttt 209  Q
    |||||||||    
T  16269896 attgttttt 16269904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 24776360 - 24776568
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||| |||||||||||| |||||||||||| ||||||||||||||| | || | || ||       |||| |||||||||||||||||||||||||||    
T  24776360 tcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcg 24776459  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    ||||||||||||||||||   ||||||||||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||  |    
T  24776460 aaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttagg 24776559  T
Q  201 attgttttt 209  Q
    |||||||||    
T  24776560 attgttttt 24776568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 1 - 177
Target Start/End: Original strand, 7026609 - 7026775
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||       ||||||||||||||||||||||||||||||||    
T  7026609 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcg 7026708  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttc 177  Q
    |||||||||||||||||||| ||||||||          ||||||||||||||||||||||||||||||||||||||    
T  7026709 aaggattgtttaataaattggattttgat----------ggattttgtagtgtaattttaacaagaaaaagtctttc 7026775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 12407385 - 12407593
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||| |||||||||||| |||||||||||| ||||||||||| ||| | || | || ||       |||| ||||||||||||||||||||||||| |    
T  12407385 tcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcgagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaattttg 12407484  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    ||||||||||||||||||   ||||||||||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| |||||||||||| ||    
T  12407485 aaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttaccatgaaaaagtctttcatgaaaacatgagatttcttaag 12407584  T
Q  201 attgttttt 209  Q
    |||||||||    
T  12407585 attgttttt 12407593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 20605241 - 20605449
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||| |||||||||||| |||||||||||| ||||||||||||||| | || | || ||       |||| |||||||||||||||||| ||||||||    
T  20605241 tcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattaaaatttcg 20605340  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    ||||||||||||||||||   ||||||||||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||  |    
T  20605341 aaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttagg 20605440  T
Q  201 attgttttt 209  Q
    |||||||||    
T  20605441 attgttttt 20605449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 22551968 - 22551760
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||| |||||||||||| |||||||||||| ||||||||||||||| |||| | || ||       |||| |||||||||||||| ||||||||||||    
T  22551968 tcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagacttttaatcacttaaaaaaagtctagtggtattcaaaattattcaaatttcg 22551869  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    || ||||||||| |||||| |||||||||||||||||||||||||| ||||| ||||||| || |||||||| ||||||||||| ||||||||||||  |    
T  22551868 aatgattgtttattaaattaaattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtatttcatgaaaacatgagatttcttatg 22551769  T
Q  201 attgttttt 209  Q
    |||||||||    
T  22551768 attgttttt 22551760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 31170829 - 31170621
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||| |||||||||||| |||||||||||| ||||||||||||||| | || | || ||       |||| ||||||||||||||||||||||||||     
T  31170829 tcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcc 31170730  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    ||||||||||||||||||   ||||||||||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||  |    
T  31170729 aaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttagg 31170630  T
Q  201 attgttttt 209  Q
    |||||||||    
T  31170629 attgttttt 31170621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 8 - 209
Target Start/End: Complemental strand, 14198775 - 14198574
Alignment:
Q  8 tctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggatt 107  Q
    |||||||||||| |||||||||||| ||||||||||||||| | || | || ||       |||  ||||||||||||||||||||||||||||||||||    
T  14198775 tctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtccagtggtattcaaaatcattcaaatttcgaaggatt 14198676  T
Q  108 gtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgttt 207  Q
    |||||||||||   ||||||||||||||||||||||||| ||||| ||||||| || |||||| ||||||||||||| ||||||||||||  ||||||||    
T  14198675 gtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaattctttcatgaaaacatgagatttcttaggattgttt 14198576  T
Q  208 tt 209  Q
    ||    
T  14198575 tt 14198574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 215430 - 215206
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||||| |||||| || ||       |||| |||||||||||||||||||||| |||     
T  215430 tcaagactctttgtcaattttaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtctcgtggtattcaaaatcattcaaacttca 215331  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    ||||||||||| ||    ||   ||| ||  |||     |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||    
T  215330 aaggattgtttgat----tg---tttaataaatt-----ggattttgtagtgtaattttaaca-gaaaaagtctttcatgaaaagatgagatttcatgag 215244  T
Q  201 attgtttttattttaaaagttactatctttttcttctc 238  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  215243 attgtttttcttttaaaagttactatctctttcttctc 215206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 35317067 - 35317275
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||| |||||||||||| ||||||||||||   ||||||||||||| | || | || ||       |||| |||||||||||||||||||||||||||    
T  35317067 tcaagattctttgtcatttaaaaaaagtcttgtaatattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcg 35317166  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    ||||||||||||||||||   ||||||||||||||||||| ||||| ||||| ||||||| || |||||||||||||||||||| || ||||||||| |     
T  35317167 aaggattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttaac 35317266  T
Q  201 attgttttt 209  Q
    |||||||||    
T  35317267 attgttttt 35317275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 43847651 - 43847859
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||| |||||||||||| |||||||||||| ||||||||||||||| | || | || ||       |||| || ||||||||||||||||||||||||    
T  43847651 tcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagttgtattcaaaatcattcaaatttcg 43847750  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    ||||||||||||||||||   | ||||||||||||||||| ||||| ||||| ||||||| || |||||||||| ||||||||| ||||||||||||  |    
T  43847751 aaggattgtttaataaatcagaatttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctgtcatgaaaacatgagatttcttagg 43847850  T
Q  201 attgttttt 209  Q
    |||||||||    
T  43847851 attgttttt 43847859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 10125497 - 10125270
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtctt--gaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 98  Q
    |||||||||||||||||||||||||||||||  ||| ||||||||||| | |||||| || ||       ||||  || |||||||||||||||||||||    
T  10125497 tcaagactctttgtcattttaaaaaagtcttttgagatattcaatcaaaacttttcatcacttaaaaaaagtctcatgatattcaaaatcattcaaattt 10125398  T
Q  99 cgaaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttg 198  Q
    | |||||||||||||||||||||||||||          ||||||||| ||||| |||||||||||||||||||||||||| |||| | ||||||||||     
T  10125397 caaaggattgtttaataaattgaattttg----------tgggattttttagtgaaattttaacaagaaaaagtctttcataaaaacacgagatttctta 10125308  T
Q  199 agattgtttttattttaaaag-ttactatctttttctt 235  Q
    ||||||||||| ||||||||| ||||||||| ||||||    
T  10125307 agattgtttttcttttaaaagtttactatctctttctt 10125270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 75 - 238
Target Start/End: Original strand, 379016 - 379169
Alignment:
Q  75 tggtattcaaaatcattcaaatttcgaaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtct 174  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| |||||||| ||||          |||||||||||||||||||||||||| ||     
T  379016 tggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatagatt----------ttgtagtgtaattttaacaagaaaaaatcg 379105  T
Q  175 ttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatctttttcttctc 238  Q
    |||||||||||||||||||| |||||||||||||| |||||||| ||||||||| |||||||||    
T  379106 ttcatgaaaagatgagatttattgagattgtttttcttttaaaacttactatctctttcttctc 379169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 5093252 - 5093044
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||| |||||||||||| |||||||||||| |||||||||||||||   || | || ||       |||| || |||||||||||||||||||||| |    
T  5093252 tcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagacgcttaatcacttaaaaaaagtctagtagtattcaaaatcattcaaattttg 5093153  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    ||||||||||||||||||   ||||||||||||||||||||||||| || || ||||||| || ||||||||||||||| |||| ||||||||||||  |    
T  5093152 aaggattgtttaataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttcataaaaacatgagatttcttagg 5093053  T
Q  201 attgttttt 209  Q
    |||||||||    
T  5093052 attgttttt 5093044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 74 - 197
Target Start/End: Original strand, 32125331 - 32125454
Alignment:
Q  74 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtc 173  Q
    |||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||| ||||  ||||||| || |||||||||    
T  32125331 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtaaaattttagcatgaaaaagtc 32125430  T
Q  174 tttcatgaaaagatgagatttctt 197  Q
    ||||||||||| ||||||||||||    
T  32125431 tttcatgaaaatatgagatttctt 32125454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 305670 - 305464
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||| | |||||||||| |||||||||||| ||||||||||||||| | || | || ||       |||| ||||||||||||||||||||||||| |    
T  305670 tcaagattatttgtcatttgaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaattttg 305571  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    || |||||||||||||||   |||| ||||||||||||| |||||| ||||| |||||||  | |||||||||||||||||||| ||||||||||||  |    
T  305570 aatgattgtttaataaatcagatttcgatggattttgtgagattttctagtgaaattttagaatgaaaaagtctttcatgaaaacatgagatttcttagg 305471  T
Q  201 attgttt 207  Q
    |||||||    
T  305470 attgttt 305464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 3574852 - 3575049
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    ||||||||  |||||||||||||||||||||||||||||||||||||| |||||| || ||       |||||||| |||||||||||||||||||||||    
T  3574852 tcaagactaattgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtgatattcaaaatcattcaaatttcg 3574951  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    |||||||||||||||||||                    ||||||||||||||||||||||||| ||||| | |||| | ||||| ||||||||||||||    
T  3574952 aaggattgtttaataaatt--------------------ggattttgtagtgtaattttaacaaaaaaaaatatttcgtaaaaagttgagatttcttgag 3575031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 9120131 - 9120339
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    ||||||||||||   ||||||||||||||||| | ||||||||||||||| || | || ||        ||| ||| |||||||||||||||| ||||      
T  9120131 tcaagactctttccaattttaaaaaagtcttgtgttattcaatcaagattcttaatcacttaaaaaaaatctagtgatattcaaaatcattcagatttta 9120230  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    |||||||||||||||||||  ||||||||||||||||||||||||| ||||| |||||||  | | |||| ||||||||||||| ||||||||||||  |    
T  9120231 aaggattgtttaataaattagattttgatggattttgtgggattttctagtgaaattttagtatggaaaaatctttcatgaaaacatgagatttcttagg 9120330  T
Q  201 attgttttt 209  Q
    |||||||||    
T  9120331 attgttttt 9120339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 1789447 - 1789630
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||| |||||||||||| |||||||||||  | ||||||||||| | | || | || ||       |||| |||||||||||||||||||||||||||    
T  1789447 tcaagattctttgtcatttaaaaaaagtcttatgatattcaatcaaaactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcg 1789546  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 184  Q
    ||||||||||||||||||   ||||||||||||||||||||||||| || || ||||||| || ||||||||||||||| ||||    
T  1789547 aaggattgtttaataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttcatcaaaa 1789630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 160 - 238
Target Start/End: Original strand, 7027051 - 7027129
Alignment:
Q  160 aacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatctttttcttctc 238  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7027051 aacaagaaaaaatctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatctttttcttctc 7027129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 44765780 - 44765939
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||| |||||||||||| |||||||||||| ||||||||||| ||| | || | || ||       |||| |||||||||||||||||||||||||||    
T  44765780 tcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcgagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcg 44765879  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaatttta 160  Q
    || |||||||||||||||   ||||||||||||||||||||||||| ||||| |||||||    
T  44765880 aaagattgtttaataaataagattttgatggattttgtgggattttctagtgaaatttta 44765939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 26601405 - 26601288
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    ||||||||||||||||||  ||||||||||||  |||||||||||||| | || | || ||       |||  |||||||||||||||||||||||||||    
T  26601405 tcaagactctttgtcattaaaaaaaagtcttgtagtattcaatcaagactcttaatcacttaaaaaaagtcacgtggtattcaaaatcattcaaatttcg 26601306  T
Q  101 aaggattgtttaataaat 118  Q
    || | |||||||||||||    
T  26601305 aatgtttgtttaataaat 26601288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 69 - 125
Target Start/End: Complemental strand, 21370687 - 21370631
Alignment:
Q  69 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgaattt 125  Q
    |||||||||||||||||||||||||||||| |||| ||||||| |||||||| ||||    
T  21370687 gtcttgtggtattcaaaatcattcaaattttgaagtattgtttgataaattggattt 21370631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 20605157 - 20605204
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 48  Q
    |||||| |||||||||||| |||||||||||| |||||||||||||||    
T  20605157 tcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaaga 20605204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 53
Target Start/End: Original strand, 24193595 - 24193631
Alignment:
Q  17 ttttaaaaaagtcttgaggtattcaatcaagattttt 53  Q
    |||||||||||||||| ||||||||||||||||||||    
T  24193595 ttttaaaaaagtcttggggtattcaatcaagattttt 24193631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 24776318 - 24776367
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatt 50  Q
    |||||||||||| | |||| |||||||||||| | |||||||||||||||    
T  24776318 tcaagactctttctaatttaaaaaaagtcttgtgttattcaatcaagatt 24776367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 53
Target Start/End: Original strand, 11534881 - 11534917
Alignment:
Q  17 ttttaaaaaagtcttgaggtattcaatcaagattttt 53  Q
    ||||||||||||||| |||||||||||||||| ||||    
T  11534881 ttttaaaaaagtctttaggtattcaatcaagactttt 11534917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 53
Target Start/End: Original strand, 29940991 - 29941027
Alignment:
Q  17 ttttaaaaaagtcttgaggtattcaatcaagattttt 53  Q
    ||||| |||||||||| ||||||||||||||||||||    
T  29940991 ttttataaaagtcttgtggtattcaatcaagattttt 29941027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 48
Target Start/End: Original strand, 32125262 - 32125302
Alignment:
Q  8 tctttgtcattttaaaaaagtcttgaggtattcaatcaaga 48  Q
    |||||||||||| ||||||||| || |||||||||||||||    
T  32125262 tctttgtcatttaaaaaaagtcatgtggtattcaatcaaga 32125302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 53
Target Start/End: Complemental strand, 34028971 - 34028935
Alignment:
Q  17 ttttaaaaaagtcttgaggtattcaatcaagattttt 53  Q
    ||||||||||||||| |||||||||||||||| ||||    
T  34028971 ttttaaaaaagtctttaggtattcaatcaagactttt 34028935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 53
Target Start/End: Original strand, 45546977 - 45547013
Alignment:
Q  17 ttttaaaaaagtcttgaggtattcaatcaagattttt 53  Q
    ||||| |||||||||| ||||||||||||||||||||    
T  45546977 ttttataaaagtcttgtggtattcaatcaagattttt 45547013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 169; Significance: 1e-90; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 39820 - 39583
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||||||||||||||||| ||||||||||||  |||||||||||||||||||| || ||       ||| ||||||||||||||||||||||| ||||    
T  39820 tcaagactctttgtcatttttaaaaagtcttgaactattcaatcaagatttttcatcacttaaaaaatgtcatgtggtattcaaaatcattcaaacttcg 39721  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    ||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  39720 aaggattatttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagataagatttcttgag 39621  T
Q  201 attgtttttattttaaaagttactatctttttcttctc 238  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  39620 attgtttttcttttaaaagttactatctctttcttctc 39583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1504 (Bit Score: 140; Significance: 2e-73; HSPs: 1)
Name: scaffold1504
Description:

Target: scaffold1504; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 867 - 1101
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnn-gtcttgtggtattcaaaatcattcaaatttc 99  Q
    |||||||||||||||||||||||||| || |||||||||||||||||| |||||| || ||        |||||||||||||||||||||||||||||||    
T  867 tcaagactctttgtcattttaaaaaaatcatgaggtattcaatcaagacttttcatcacttaaaaaaaagtcttgtggtattcaaaatcattcaaatttc 966  T
Q  100 gaaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttga 199  Q
    |||| ||| |||||||||| || |||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||| ||||||||||||||    
T  967 gaagaattatttaataaataga-ttttgatggattttgtgggattttgtagtgtaattttaactagaaaaagtctttcattaaaatatgagatttcttga 1065  T
Q  200 gattgtttttattttaaaagttactatctttttcttctc 238  Q
    ||||||||   |||||||||||||||||| |||||||||    
T  1066 gattgttt---ttttaaaagttactatctctttcttctc 1101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 140; Significance: 2e-73; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 19 - 238
Target Start/End: Complemental strand, 58262 - 58042
Alignment:
Q  19 ttaaaaaagtcttgaggtattcaatcaaga-tttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaa 117  Q
    |||||||||||||| |||||||| |||||| ||||||| || ||       ||  |||||||||||||||||||||||||||||| ||||||||||||||    
T  58262 ttaaaaaagtcttgtggtattcagtcaagactttttcatcacttaaaaaaagttctgtggtattcaaaatcattcaaatttcgaatgattgtttaataaa 58163  T
Q  118 ttgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttattttaaa 217  Q
    ||| |||||||||||||||||||||||||||||| |||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| |||||||    
T  58162 ttggattttgatggattttgtgggattttgtagtataattttaacaagagaaaatctttcatgaaaagatgagatttcttgagattgtttttcttttaaa 58063  T
Q  218 agttactatctttttcttctc 238  Q
    ||||||||||| |||||||||    
T  58062 agttactatctctttcttctc 58042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 135; Significance: 2e-70; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 13886 - 14114
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||| |||||| || ||       |||||||||||||||||||||||||||||||     
T  13886 tcaagactctttgtcattttaaaaaagtattgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttca 13985  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    || ||||||||||||||||| ||||||||||||          |||||||||  ||||||| ||||||||||||||||||||||||||||||||||||||    
T  13986 aaagattgtttaataaattggattttgatggat----------tttgtagtgggattttaataagaaaaagtctttcatgaaaagatgagatttcttgag 14075  T
Q  201 attgtttttattttaaaagttactatctttttcttctca 239  Q
    ||||||||| |||||||||||||||||| ||||||||||    
T  14076 attgtttttcttttaaaagttactatctctttcttctca 14114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 135; Significance: 2e-70; HSPs: 2)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 21441 - 21213
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||| |||||| || ||       |||||||||||||||||||||||||||||||     
T  21441 tcaagactctttgtcattttaaaaaagtattgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttca 21342  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    || ||||||||||||||||| |||||||||||||||||          ||||  ||||||| ||||||||||||||||||||||||||||||||||||||    
T  21341 aaagattgtttaataaattggattttgatggattttgt----------agtgggattttaataagaaaaagtctttcatgaaaagatgagatttcttgag 21252  T
Q  201 attgtttttattttaaaagttactatctttttcttctca 239  Q
    ||||||||| |||||||||||||||||| ||||||||||    
T  21251 attgtttttcttttaaaagttactatctctttcttctca 21213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 129 - 239
Target Start/End: Original strand, 28473 - 28584
Alignment:
Q  129 tggattttgtgggattttg-tagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatc 227  Q
    |||||||||  |||||||| |||||  ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  28473 tggattttgatggattttggtagtgggattttaataagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttcttttaaaagttactatc 28572  T
Q  228 tttttcttctca 239  Q
    | ||||||||||    
T  28573 tctttcttctca 28584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 124; Significance: 8e-64; HSPs: 2)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 69 - 238
Target Start/End: Complemental strand, 37042 - 36876
Alignment:
Q  69 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 168  Q
    |||||| |||||||||||||||| ||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  37042 gtcttgaggtattcaaaatcattaaaatttcgaagcattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 36943  T
Q  169 aagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatctttttcttctc 238  Q
    ||||||||||||||||||| ||||||||||||||||   || |||||||||||| ||||| |||||||||    
T  36942 aagtctttcatgaaaagataagatttcttgagattg---ttcttttaaaagttattatctctttcttctc 36876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 37068 - 37027
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaa 42  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  37068 tcaagactctttgtcattttaaaaaagtcttgaggtattcaa 37027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 108; Significance: 3e-54; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 197
Target Start/End: Original strand, 100215 - 100411
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||| |||||||||||| |||||||||||| |||| |||||||||| | || | || ||       |||| ||||||||||||||||||||||||||     
T  100215 tcaagattctttgtcatttaaaaaaagtcttgtggtactcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttca 100314  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 197  Q
    ||||||||||||||||||  ||||||||||||||||||||| |||| ||||| ||||||||||||||||||||||||||||||| ||||||||||||    
T  100315 aaggattgtttaataaatcaaattttgatggattttgtgggtttttctagtgaaattttaacaagaaaaagtctttcatgaaaacatgagatttctt 100411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0400 (Bit Score: 104; Significance: 7e-52; HSPs: 1)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 15236 - 15028
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||| |||||||||||| ||||||||||||  |||||||||||||| | || | || ||       |||| |||||||||||||||||||||||||||    
T  15236 tcaagattctttgtcatttaaaaaaagtcttgtagtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcg 15137  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    ||||||||||||||||||   ||||||||||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| |||| |||||||  |    
T  15136 aaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgaaatttcttagg 15037  T
Q  201 attgttttt 209  Q
    |||||||||    
T  15036 attgttttt 15028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0365 (Bit Score: 104; Significance: 7e-52; HSPs: 1)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 15879 - 15671
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||| |||||||||||| ||||||||||||  |||||||||||||| | || | || ||       |||| |||||||||||||||||||||||||||    
T  15879 tcaagattctttgtcatttaaaaaaagtcttgtagtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcg 15780  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    ||||||||||||||||||   ||||||||||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| |||| |||||||  |    
T  15779 aaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgaaatttcttagg 15680  T
Q  201 attgttttt 209  Q
    |||||||||    
T  15679 attgttttt 15671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0839 (Bit Score: 102; Significance: 1e-50; HSPs: 1)
Name: scaffold0839
Description:

Target: scaffold0839; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 98 - 235
Target Start/End: Complemental strand, 3798 - 3661
Alignment:
Q  98 tcgaaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 197  Q
    ||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||| | |||| ||    
T  3798 tcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaggtctttcataaaaagattatatttttt 3699  T
Q  198 gagattgtttttattttaaaagttactatctttttctt 235  Q
    |||||||||||| |||||||||||||||||| ||||||    
T  3698 gagattgtttttcttttaaaagttactatctctttctt 3661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 95; Significance: 2e-46; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 102097 - 102307
Alignment:
Q  1 tcaagactctttgtcattttaaaaaag--tcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaattt 98  Q
    |||||| |||||||||||| |||||||  ||||| ||||||||||||||| | || | || ||       |||| |||||||||||||||||||||||||    
T  102097 tcaagattctttgtcatttaaaaaaagagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaattt 102196  T
Q  99 cgaaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttg 198  Q
    |||| |||||||||||||||   ||||||||||||||||||||||||| ||||| ||||||| || ||||||||||||||| |||| ||||||||||||     
T  102197 cgaaagattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcataaaaatatgagatttctta 102296  T
Q  199 agattgttttt 209  Q
     ||||||||||    
T  102297 tgattgttttt 102307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0922 (Bit Score: 93; Significance: 3e-45; HSPs: 1)
Name: scaffold0922
Description:

Target: scaffold0922; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 4204 - 4337
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||| |||||| |||||       |||||||||||||||||||||||||||||| |    
T  4204 tcaagactctttgtaattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaattttg 4303  T
Q  101 aaggattgtttaataaattgaattttgatggatt 134  Q
    |||||||||||||||||||| |||||||||||||    
T  4304 aaggattgtttaataaattggattttgatggatt 4337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 92; Significance: 1e-44; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 129 - 228
Target Start/End: Original strand, 14892 - 14991
Alignment:
Q  129 tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatct 228  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  14892 tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttaagattgtttttcttttaaaagttactatct 14991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 91; Significance: 4e-44; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 22 - 209
Target Start/End: Complemental strand, 38786 - 38600
Alignment:
Q  22 aaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattga 121  Q
    ||||||||||| ||||||||||||||| | || | || ||       |||| |||||||||||||||||||||||||||||||||||||||||||   ||    
T  38786 aaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataatcaga 38687  T
Q  122 attttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 209  Q
     |||||||||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||  ||||||||||    
T  38686 -ttttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgttttt 38600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 39098 - 38890
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||| ||||| |||||| |||||||||||| |||||||||| |||| | || | || ||       |||| ||| ||||||||||||||||||||| |    
T  39098 tcaagattctttatcatttaaaaaaagtcttgtggtattcaataaagactcttaatcacttaaaagaagtctagtgatattcaaaatcattcaaatttgg 38999  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    ||||||||||||||||||   ||||||||||||||||||||||||| ||||| ||||||  || |||||||||||||||||||| |||||||| |||  |    
T  38998 aaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttggcatgaaaaagtctttcatgaaaacatgagattccttagg 38899  T
Q  201 attgttttt 209  Q
    |||||||||    
T  38898 attgttttt 38890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0276 (Bit Score: 69; Significance: 5e-31; HSPs: 1)
Name: scaffold0276
Description:

Target: scaffold0276; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 742 - 529
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcaccatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcg 100  Q
    |||||| |||||||||||| |||||||| ||| ||||||||||||| | | || | || ||        | | ||||||||||||||||||||||||| |    
T  742 tcaagattctttgtcatttaaaaaaagtattgtggtattcaatcaaaactcttaatcacttaaattttttttagtggtattcaaaatcattcaaatttgg 643  T
Q  101 aaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 200  Q
    ||||||||||||||||||   ||||||||||||||||||| ||||| ||||| ||||||   | |||||||||||| | ||||| ||||||||||||  |    
T  642 aaggattgtttaataaatcatattttgatggattttgtggaattttctagtgaaattttggtatgaaaaagtctttgacgaaaacatgagatttcttagg 543  T
Q  201 attgtttttatttt 214  Q
    ||| ||||| ||||    
T  542 attttttttttttt 529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 77 - 152
Target Start/End: Original strand, 199905 - 199980
Alignment:
Q  77 gtattcaaaatcattcaaatttcgaaggattgtttaataaattgaattttgatggattttgtgggattttgtagtg 152  Q
    ||||| |||||||||||||||| ||| || ||||||||||||||||||||||| ||||||||| |||||| |||||    
T  199905 gtatttaaaatcattcaaattttgaaagagtgtttaataaattgaattttgattgattttgtgagattttttagtg 199980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 3)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 233741 - 233795
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttca 55  Q
    ||||||||||||||||||||||||||||||| |||| ||||||||| | ||||||    
T  233741 tcaagactctttgtcattttaaaaaagtcttaaggtcttcaatcaaaacttttca 233795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 234589 - 234643
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttca 55  Q
    ||||||||||||||||||||||||||||||| |||| ||||||||| | ||||||    
T  234589 tcaagactctttgtcattttaaaaaagtcttaaggtcttcaatcaaaacttttca 234643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 222573 - 222627
Alignment:
Q  1 tcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttca 55  Q
    |||| |||||||||||||||||||||||||| |||| ||||||||| | ||||||    
T  222573 tcaaaactctttgtcattttaaaaaagtcttaaggtcttcaatcaaaacttttca 222627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0202 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0202
Description:

Target: scaffold0202; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 53
Target Start/End: Complemental strand, 16582 - 16546
Alignment:
Q  17 ttttaaaaaagtcttgaggtattcaatcaagattttt 53  Q
    |||||||||||||||| |||||| |||||||||||||    
T  16582 ttttaaaaaagtcttgtggtatttaatcaagattttt 16546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 53
Target Start/End: Complemental strand, 81820 - 81784
Alignment:
Q  17 ttttaaaaaagtcttgaggtattcaatcaagattttt 53  Q
    ||||| |||||||||| ||||||||||||||||||||    
T  81820 ttttataaaagtcttgtggtattcaatcaagattttt 81784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University