View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16123_low_60 (Length: 264)
Name: NF16123_low_60
Description: NF16123
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16123_low_60 |
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Alignment Details
Target: chr8 (Bit Score: 180; Significance: 3e-97; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 13 - 248
Target Start/End: Original strand, 4572332 - 4572554
Alignment:
| Q |
13 |
gaacctataatgataataaacctttctttaaggtttaaaaaccatcaagaagtggaaaaatttgaacagttatagtgaacagaacaaattcaaaggaaat |
112 |
Q |
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| T |
4572332 |
gaacctataatgataataaacctttctttaaggtttaaaaaccatcaagaagtggaaaactttgaa-------------cagaacaaattcaaaggaaat |
4572418 |
T |
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| Q |
113 |
aaggatagaatgagccatagaatatagcatagaatagttgcctaactttggttttcacacgcttaaatggttctttttctttcctctttttaggcttagg |
212 |
Q |
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||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4572419 |
aaggatagaatgagccacagaatatagcatagaatagttgcctaactttagttttcacacgcttaaatggttctttttctttcctctttttaggcttagg |
4572518 |
T |
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| Q |
213 |
tttgaacaaatttgttgagattctccttagcctaac |
248 |
Q |
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|||||||||||||||||||||||||||||||||||| |
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| T |
4572519 |
tttgaacaaatttgttgagattctccttagcctaac |
4572554 |
T |
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