View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16124_high_46 (Length: 247)
Name: NF16124_high_46
Description: NF16124
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16124_high_46 |
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Alignment Details
Target: chr2 (Bit Score: 206; Significance: 1e-113; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 18 - 227
Target Start/End: Complemental strand, 29362898 - 29362689
Alignment:
| Q |
18 |
ttactgaacgagaaagggaaacaggtcatgacggaatgatatatcagaaaagtatgttttaatgtcaatcaaattgcttcaaatgaaacagcaattccaa |
117 |
Q |
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| T |
29362898 |
ttactgaacgagaaagggaaacaggtcatgacggaatgatgtatcagaaaagtatgttttaatgtcaatcaaattgcttcaaatgaaacagcaattccaa |
29362799 |
T |
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| Q |
118 |
tgtcacctggttgaatcataaaaaagtgtcagtgttgtgaagaataataaagtccaaatcttatacaaataattgaaaatgataaagatgatgcagaaat |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29362798 |
tgtcacctggttgaatcataaaaaagtgtcagtgttgtgaagaataataaagtccaaatcttatacaaataattgaaaatgataaagatgatgcagaaat |
29362699 |
T |
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| Q |
218 |
ttcagccctt |
227 |
Q |
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|||||||||| |
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| T |
29362698 |
ttcagccctt |
29362689 |
T |
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