View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16125_low_4 (Length: 364)
Name: NF16125_low_4
Description: NF16125
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16125_low_4 |
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Alignment Details
Target: chr5 (Bit Score: 265; Significance: 1e-148; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 265; E-Value: 1e-148
Query Start/End: Original strand, 13 - 344
Target Start/End: Complemental strand, 11051282 - 11050952
Alignment:
| Q |
13 |
aaaatattaggttgagtcgcaaactaaatcactctcttttaaacattttgcagatttgtctcaatggtgctcggaatttcttctatttgttatacatttg |
112 |
Q |
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| T |
11051282 |
aaaatattaggttgagtcgcgaactaaatcaccat-ttttaaacattttgcggatttgtctcaatggtgctcgtaatttcttctatttgttatacatttg |
11051184 |
T |
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| Q |
113 |
aaaattattccttttctttatgagttatactcttaaatttggtccccgcaaaccttattttctaacttcgtccctgctaacacctactattattttctaa |
212 |
Q |
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|||||||||| |||||||||||||||||||||||||||||||||||| |||||||||| |||| |||||||||||||||||||||||||||| ||||||| |
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| T |
11051183 |
aaaattattctttttctttatgagttatactcttaaatttggtccccacaaaccttatcttcttacttcgtccctgctaacacctactatta-tttctaa |
11051085 |
T |
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| Q |
213 |
agtgcttggaat-aaaaaactaaagaagaaacaattttataaaatactttgttcctgttatgcatcccacaattctttttcaaataaccattcacgtaca |
311 |
Q |
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|||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
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| T |
11051084 |
agtgcttggaataaaaaaactaaagaaaaaacaattttataaaatactttgttcctgttacgcatcccacaattctttttcaaataaccattcacgtaca |
11050985 |
T |
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| Q |
312 |
tatttatattgatcatcatcatgaattaaaaga |
344 |
Q |
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||||||||||||||||||||||||||||||||| |
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| T |
11050984 |
tatttatattgatcatcatcatgaattaaaaga |
11050952 |
T |
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