View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16126_high_5 (Length: 256)
Name: NF16126_high_5
Description: NF16126
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16126_high_5 |
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Alignment Details
Target: chr2 (Bit Score: 225; Significance: 1e-124; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 2 - 246
Target Start/End: Complemental strand, 32856142 - 32855898
Alignment:
| Q |
2 |
gctaacattactctttactccatagcacctgtcacaacaagtatagtatgtttctcccactccattttcaatgtgcctctcttttgccggtttaattgtg |
101 |
Q |
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| T |
32856142 |
gctaacatttctctttcgtccatagcacctgtcacaacaagtatagtatgtttctcccactccgttttcaatgtgcctctcttttgccggtttaattgtg |
32856043 |
T |
|
| Q |
102 |
ttccatcggcttcaaatgcatctctatatccacaatattccaagggtgttgtaaattttcatggttcctttaccactttctcatgttgttgatattgatg |
201 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32856042 |
ttccatcggcttcaaatgcatctctatatccacaatattccaagggtgttgtaaattttcatggttcctttaccactttctcatgttgttgatattgatg |
32855943 |
T |
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| Q |
202 |
ccaatggagaagatgaagtgtgattcactataattagtgcttcat |
246 |
Q |
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|||||||||||||||||| |||||||||||||||||||||||||| |
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| T |
32855942 |
ccaatggagaagatgaagggtgattcactataattagtgcttcat |
32855898 |
T |
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