View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16126_low_10 (Length: 227)
Name: NF16126_low_10
Description: NF16126
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16126_low_10 |
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Alignment Details
Target: chr8 (Bit Score: 140; Significance: 2e-73; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 9 - 211
Target Start/End: Complemental strand, 8274129 - 8273918
Alignment:
| Q |
9 |
ccacagcctaccgccacaaagctaacaagaacaataggctagtgcagaaaataagcacaagtacgggaagcatgaaacatgaaa---------acatgaa |
99 |
Q |
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| T |
8274129 |
ccacagcctactgccacaaagctaacaagaacaataagctagtgcagaaaataagcacagctacaggaagcatgaagcatgaaacatgaaaaaacatgaa |
8274030 |
T |
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| Q |
100 |
acaaatcctaaaaacaaatgtacattcccataagccgagccatcaataaaaaatctgcaccgacagctgaggtatccgagcaactcaaacacctatagca |
199 |
Q |
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|||||||| ||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8274029 |
acaaatcccaaaaacaaatgtacattcccataagccaagccatcaataaaaaacctgcaccgacagctgaggtatccgagcaactcaaacacctatagca |
8273930 |
T |
|
| Q |
200 |
gattcaaaaaac |
211 |
Q |
| |
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||| |||||||| |
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| T |
8273929 |
gatccaaaaaac |
8273918 |
T |
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