View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1612_low_4 (Length: 339)
Name: NF1612_low_4
Description: NF1612
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1612_low_4 |
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Alignment Details
Target: chr7 (Bit Score: 271; Significance: 1e-151; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 6 - 323
Target Start/End: Original strand, 4659291 - 4659605
Alignment:
| Q |
6 |
cataggcccaatgaatataaaaaacggacatgatggcagttgtcacacagatttttgttaaattagagagtctatggttgaaaatcgagaactataattt |
105 |
Q |
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| T |
4659291 |
cataggcccaatgaatataaaaaacggacatgatggcagttgtcacacaaatttttgttaaatcagagagtctatggttgaaaatcgagaactataattt |
4659390 |
T |
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| Q |
106 |
ataagagaaaacatatgtagataagatttttaattcttttctgcacggaagaagaaaatataaaagttgatgtatttatagaaaaaatatataattaggt |
205 |
Q |
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| T |
4659391 |
ataagagaaaacatatgtagataagatttttaattcttttctgtacggaagaagaaaatataaaagttgatgtatttatagaaaaaatatataattaggt |
4659490 |
T |
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| Q |
206 |
cctacgaatataggactaaatttaannnnnnnaaccagccatttttaatccacataatagatgaagacttgctagaagtcacctagtgtataataaataa |
305 |
Q |
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| T |
4659491 |
cctacgaatataggactaaatttaatttttttaaccagccatttttaatccacataatagatgaagacttgctagaagtcacctagtgt---ataaataa |
4659587 |
T |
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| Q |
306 |
catgcaatagtgggatac |
323 |
Q |
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| T |
4659588 |
catgcaatagtgggatac |
4659605 |
T |
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