View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16130_high_6 (Length: 204)
Name: NF16130_high_6
Description: NF16130
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16130_high_6 |
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Alignment Details
Target: chr6 (Bit Score: 166; Significance: 5e-89; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 166; E-Value: 5e-89
Query Start/End: Original strand, 18 - 191
Target Start/End: Original strand, 427369 - 427542
Alignment:
| Q |
18 |
taattttcgtttaagcatcgtgtagagcatcctatgcttgaaggaaaaaagaaaattggctataaaaagatgaacaaacccactatccttccattccatc |
117 |
Q |
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| T |
427369 |
taattttcgtttaagcatcatgtagagcatcctatgcttgaaggaaaaaagaaaattggctataaaaagatgaacaaacccactatccttccattccatc |
427468 |
T |
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| Q |
118 |
ttcaaccttctctttcaccaacacattcacaacaaaacgaatgatagaaaatcgttttatctcctgtttcttct |
191 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
427469 |
ttcaaccttctctttcaccaacacattcacaacaaaacgaatgatagaaaatcgttttatctcctttttcttct |
427542 |
T |
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