View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16131_high_25 (Length: 273)

Name: NF16131_high_25
Description: NF16131
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16131_high_25
NF16131_high_25
[»] chr2 (30 HSPs)
chr2 (19-227)||(600991-601199)
chr2 (151-221)||(17778991-17779061)
chr2 (151-206)||(3197093-3197148)
chr2 (151-205)||(7206117-7206171)
chr2 (160-218)||(22608528-22608586)
chr2 (152-205)||(18782555-18782608)
chr2 (154-227)||(41939101-41939174)
chr2 (155-227)||(27412829-27412901)
chr2 (153-208)||(9842214-9842269)
chr2 (160-223)||(28202298-28202361)
chr2 (155-202)||(34191326-34191373)
chr2 (151-221)||(14735892-14735962)
chr2 (152-218)||(19212951-19213017)
chr2 (153-203)||(21295393-21295443)
chr2 (153-227)||(24033731-24033805)
chr2 (151-221)||(26999102-26999172)
chr2 (160-218)||(43117192-43117250)
chr2 (160-218)||(44488012-44488070)
chr2 (160-221)||(690789-690850)
chr2 (153-206)||(11560492-11560545)
chr2 (150-187)||(15447753-15447790)
chr2 (153-206)||(16221360-16221413)
chr2 (152-205)||(24548110-24548163)
chr2 (151-228)||(43424651-43424728)
chr2 (160-205)||(44926416-44926461)
chr2 (151-191)||(3708371-3708411)
chr2 (151-191)||(11869005-11869045)
chr2 (165-217)||(12303585-12303637)
chr2 (145-221)||(26400737-26400813)
chr2 (151-191)||(35360398-35360438)
[»] chr5 (25 HSPs)
chr5 (153-227)||(37054262-37054336)
chr5 (142-227)||(5015264-5015348)
chr5 (153-205)||(18538602-18538654)
chr5 (151-227)||(18789028-18789104)
chr5 (151-219)||(37614428-37614496)
chr5 (151-218)||(32565516-32565583)
chr5 (152-218)||(6489000-6489066)
chr5 (165-227)||(17230392-17230454)
chr5 (151-205)||(18489091-18489145)
chr5 (151-217)||(19248471-19248537)
chr5 (165-219)||(35992107-35992161)
chr5 (153-218)||(5551283-5551348)
chr5 (148-205)||(10199008-10199065)
chr5 (152-215)||(12909074-12909134)
chr5 (154-191)||(17861974-17862011)
chr5 (165-218)||(21657400-21657453)
chr5 (160-205)||(28604433-28604478)
chr5 (149-185)||(436602-436638)
chr5 (166-206)||(5539706-5539746)
chr5 (151-191)||(13351448-13351488)
chr5 (153-205)||(15889405-15889457)
chr5 (153-221)||(17210708-17210776)
chr5 (153-197)||(33133633-33133677)
chr5 (152-204)||(34436844-34436896)
chr5 (151-191)||(37461789-37461829)
[»] chr3 (20 HSPs)
chr3 (153-221)||(2662086-2662154)
chr3 (151-227)||(7829888-7829964)
chr3 (153-208)||(48376829-48376884)
chr3 (169-219)||(2078250-2078300)
chr3 (153-227)||(33223862-33223935)
chr3 (153-191)||(53429149-53429187)
chr3 (157-202)||(12408176-12408221)
chr3 (153-206)||(29631180-29631233)
chr3 (160-217)||(29791777-29791834)
chr3 (160-217)||(35392004-35392061)
chr3 (154-219)||(36690007-36690072)
chr3 (165-214)||(45254237-45254286)
chr3 (165-222)||(48688121-48688177)
chr3 (160-209)||(49088753-49088802)
chr3 (151-208)||(51505865-51505922)
chr3 (159-208)||(54230111-54230160)
chr3 (151-191)||(916195-916235)
chr3 (153-205)||(7464506-7464558)
chr3 (153-205)||(18870740-18870792)
chr3 (151-227)||(32632313-32632389)
[»] chr7 (18 HSPs)
chr7 (160-227)||(23221393-23221460)
chr7 (160-227)||(43267458-43267525)
chr7 (151-203)||(22267573-22267625)
chr7 (152-227)||(30857241-30857316)
chr7 (153-218)||(40187638-40187703)
chr7 (157-205)||(20115597-20115645)
chr7 (152-220)||(34773224-34773292)
chr7 (152-191)||(36803831-36803870)
chr7 (160-227)||(44651502-44651569)
chr7 (151-205)||(24839480-24839534)
chr7 (153-191)||(28703502-28703540)
chr7 (150-228)||(48103666-48103744)
chr7 (174-227)||(46849100-46849153)
chr7 (151-191)||(29488398-29488438)
chr7 (151-191)||(32869602-32869642)
chr7 (151-191)||(33232740-33232780)
chr7 (151-191)||(34284882-34284922)
chr7 (161-217)||(35836021-35836077)
[»] chr1 (30 HSPs)
chr1 (151-220)||(48131228-48131297)
chr1 (153-205)||(36371055-36371107)
chr1 (153-227)||(29233967-29234041)
chr1 (153-227)||(43356430-43356503)
chr1 (153-227)||(44243867-44243941)
chr1 (151-216)||(2817377-2817442)
chr1 (170-227)||(32923829-32923886)
chr1 (170-218)||(4806797-4806845)
chr1 (151-191)||(7925356-7925396)
chr1 (151-191)||(11014224-11014264)
chr1 (153-205)||(36672729-36672781)
chr1 (150-202)||(41573287-41573339)
chr1 (152-227)||(3693789-3693864)
chr1 (151-218)||(13590102-13590169)
chr1 (160-210)||(11241995-11242045)
chr1 (157-207)||(17188681-17188731)
chr1 (152-206)||(30678827-30678881)
chr1 (152-218)||(42045374-42045440)
chr1 (151-205)||(52441526-52441580)
chr1 (150-191)||(7484723-7484764)
chr1 (151-208)||(8153127-8153184)
chr1 (159-208)||(13261171-13261220)
chr1 (150-227)||(22388168-22388245)
chr1 (160-205)||(47961304-47961349)
chr1 (154-206)||(2613717-2613769)
chr1 (153-205)||(3528484-3528536)
chr1 (152-200)||(15729423-15729471)
chr1 (153-205)||(21400038-21400090)
chr1 (182-226)||(23334611-23334655)
chr1 (153-193)||(40693680-40693720)
[»] chr8 (23 HSPs)
chr8 (151-199)||(13575281-13575329)
chr8 (151-217)||(1230664-1230730)
chr8 (153-227)||(11708980-11709054)
chr8 (174-223)||(12959304-12959353)
chr8 (160-225)||(42700506-42700571)
chr8 (162-227)||(43778022-43778087)
chr8 (153-205)||(37015851-37015903)
chr8 (154-221)||(10152451-10152518)
chr8 (153-204)||(39164975-39165026)
chr8 (153-191)||(6008658-6008696)
chr8 (151-221)||(7553671-7553741)
chr8 (151-193)||(38204435-38204477)
chr8 (152-218)||(39821877-39821943)
chr8 (153-203)||(44293569-44293619)
chr8 (154-227)||(9655990-9656063)
chr8 (160-228)||(3672608-3672676)
chr8 (151-191)||(5325536-5325576)
chr8 (165-221)||(6038274-6038330)
chr8 (154-206)||(8717489-8717541)
chr8 (154-206)||(12714384-12714436)
chr8 (151-191)||(20665706-20665746)
chr8 (154-218)||(26991759-26991823)
chr8 (146-206)||(32555241-32555301)
[»] chr6 (20 HSPs)
chr6 (152-220)||(2105898-2105966)
chr6 (165-221)||(4826296-4826352)
chr6 (152-204)||(28757284-28757336)
chr6 (153-208)||(331898-331953)
chr6 (172-218)||(2617207-2617253)
chr6 (153-223)||(21236958-21237028)
chr6 (151-205)||(24373725-24373779)
chr6 (160-221)||(10018401-10018461)
chr6 (152-205)||(11520583-11520636)
chr6 (152-205)||(21296751-21296804)
chr6 (152-221)||(32053781-32053850)
chr6 (151-191)||(247337-247377)
chr6 (154-218)||(1989045-1989108)
chr6 (151-191)||(11129639-11129679)
chr6 (153-213)||(12204363-12204423)
chr6 (153-205)||(16390423-16390475)
chr6 (160-208)||(16453349-16453397)
chr6 (159-219)||(29457181-29457241)
chr6 (151-191)||(33975921-33975961)
chr6 (151-191)||(34828298-34828338)
[»] chr4 (37 HSPs)
chr4 (153-227)||(41520948-41521022)
chr4 (153-218)||(13121538-13121603)
chr4 (160-205)||(54500570-54500615)
chr4 (151-191)||(12671777-12671817)
chr4 (141-209)||(21465593-21465661)
chr4 (151-227)||(29731372-29731448)
chr4 (151-218)||(11286783-11286850)
chr4 (152-227)||(22164262-22164337)
chr4 (145-220)||(22411750-22411825)
chr4 (152-227)||(22630353-22630428)
chr4 (154-221)||(32006495-32006562)
chr4 (151-206)||(36478983-36479038)
chr4 (166-221)||(46434759-46434814)
chr4 (160-218)||(10564467-10564525)
chr4 (166-220)||(23160047-23160101)
chr4 (165-227)||(25999403-25999465)
chr4 (153-207)||(34942424-34942478)
chr4 (149-227)||(48171871-48171949)
chr4 (152-214)||(51002280-51002342)
chr4 (148-205)||(7230269-7230326)
chr4 (152-205)||(11949778-11949831)
chr4 (160-205)||(21317353-21317398)
chr4 (152-205)||(21935005-21935058)
chr4 (154-191)||(29346337-29346374)
chr4 (172-221)||(38767033-38767082)
chr4 (152-205)||(43722758-43722811)
chr4 (152-205)||(50362154-50362207)
chr4 (160-225)||(52936642-52936707)
chr4 (157-205)||(897423-897471)
chr4 (170-218)||(7739212-7739260)
chr4 (151-191)||(10262112-10262152)
chr4 (151-227)||(17423170-17423246)
chr4 (151-191)||(19587831-19587871)
chr4 (153-205)||(20799409-20799461)
chr4 (151-191)||(21562303-21562343)
chr4 (151-191)||(24080183-24080223)
chr4 (151-191)||(43329824-43329864)
[»] scaffold0334 (1 HSPs)
scaffold0334 (160-227)||(5183-5250)
[»] scaffold0154 (1 HSPs)
scaffold0154 (151-208)||(10769-10826)
[»] scaffold0045 (2 HSPs)
scaffold0045 (153-218)||(63856-63921)
scaffold0045 (153-218)||(71188-71253)
[»] scaffold0350 (1 HSPs)
scaffold0350 (165-221)||(1254-1310)
[»] scaffold0188 (1 HSPs)
scaffold0188 (153-205)||(28128-28180)
[»] scaffold0057 (1 HSPs)
scaffold0057 (157-205)||(35176-35224)


Alignment Details
Target: chr2 (Bit Score: 185; Significance: 1e-100; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 19 - 227
Target Start/End: Original strand, 600991 - 601199
Alignment:
Q  19 gattttagttttacaatcgtattgtttgcacattaaaatattatatccaaccccaactttattggacaacatatttaacagcaatattttaatttttaaa 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  600991 gattttagttttacaatcgtattgtttgcacattaaaatattatatccaaccccaactttattggacaacatatttaacaacaatattttaatttttaaa 601090  T
Q  119 tatcatttctcttgagtatattaattattatgttgtcctcatgagtttagctcagttggtagagacaatgcattacatatgtaaggtttgaagttcaaac 218  Q
    |||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  601091 tatcatttctcttgagtatattaattattatgttgttctcatgaatttagctcagttggtagagacaatgcagtacatatgtaagatttgaagttcaaac 601190  T
Q  219 tccaaccac 227  Q
    |||| ||||    
T  601191 tccagccac 601199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 151 - 221
Target Start/End: Complemental strand, 17779061 - 17778991
Alignment:
Q  151 ttgtcctcatgagtttagctcagttggtagagacaatgcattacatatgtaaggtttgaagttcaaactcc 221  Q
    |||||||| |||||||| ||||||||||||||||||||||| | || || |||||||| ||||| ||||||    
T  17779061 ttgtcctcgtgagtttaactcagttggtagagacaatgcataaaatttgcaaggtttggagttcgaactcc 17778991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 206
Target Start/End: Complemental strand, 3197148 - 3197093
Alignment:
Q  151 ttgtcctcatgagtttagctcagttggtagagacaatgcattacatatgtaaggtt 206  Q
    |||||||| ||||||||||||||||||||| |||||||||| | ||||| ||||||    
T  3197148 ttgtcctcgtgagtttagctcagttggtagggacaatgcataatatatgcaaggtt 3197093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 151 - 205
Target Start/End: Original strand, 7206117 - 7206171
Alignment:
Q  151 ttgtcctcatgagtttagctcagttggtagagacaatgcattacatatgtaaggt 205  Q
    |||||||| |||| ||||||||||||||||||||||||||| | ||||| |||||    
T  7206117 ttgtcctcgtgagcttagctcagttggtagagacaatgcataatatatgcaaggt 7206171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 160 - 218
Target Start/End: Original strand, 22608528 - 22608586
Alignment:
Q  160 tgagtttagctcagttggtagagacaatgcattacatatgtaaggtttgaagttcaaac 218  Q
    |||| ||||||||||||||||||||||||||| | ||||| ||||| ||| ||||||||    
T  22608528 tgagcttagctcagttggtagagacaatgcataatatatgcaaggtatgaggttcaaac 22608586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 152 - 205
Target Start/End: Complemental strand, 18782608 - 18782555
Alignment:
Q  152 tgtcctcatgagtttagctcagttggtagagacaatgcattacatatgtaaggt 205  Q
    ||||||||||||||||||| |||||||||| ||||||||| | ||||| |||||    
T  18782608 tgtcctcatgagtttagctaagttggtagaaacaatgcataatatatgcaaggt 18782555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 41939174 - 41939101
Alignment:
Q  154 tcctcatgagtttagctcagttggtagagacaatgcattacatatgtaaggtttgaagttcaaactccaaccac 227  Q
    ||||| |||| |||||| ||||||||| || ||||||| | |||||||||||||||  |||||||||| |||||    
T  41939174 tcctcgtgagcttagcttagttggtagggataatgcataatatatgtaaggtttgagattcaaactccgaccac 41939101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 155 - 227
Target Start/End: Complemental strand, 27412901 - 27412829
Alignment:
Q  155 cctcatgagtttagctcagttggtagagacaatgcattacatatgtaaggtttgaagttcaaactccaaccac 227  Q
    |||| |||| ||| ||||||||||||||||||||||| | ||||||||||| ||  |||||||| || |||||    
T  27412901 cctcgtgagcttaactcagttggtagagacaatgcataatatatgtaaggtctgttgttcaaaccccgaccac 27412829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 153 - 208
Target Start/End: Complemental strand, 9842269 - 9842214
Alignment:
Q  153 gtcctcatgagtttagctcagttggtagagacaatgcattacatatgtaaggtttg 208  Q
    |||||| |||| |||||||||||||||| |||||||||| | ||||| ||||||||    
T  9842269 gtcctcgtgagcttagctcagttggtagggacaatgcataaaatatgcaaggtttg 9842214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 160 - 223
Target Start/End: Original strand, 28202298 - 28202361
Alignment:
Q  160 tgagtttagctcagttggtagagacaatgcattacatatgtaaggtttgaagttcaaactccaa 223  Q
    |||| |||||||||||| ||| |||||||||| | |||||||||||  ||||||||||| ||||    
T  28202298 tgagcttagctcagttgatagggacaatgcataatatatgtaaggtccgaagttcaaaccccaa 28202361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 155 - 202
Target Start/End: Complemental strand, 34191373 - 34191326
Alignment:
Q  155 cctcatgagtttagctcagttggtagagacaatgcattacatatgtaa 202  Q
    ||||||||| |||||||||||||||| |||||||||| | ||||||||    
T  34191373 cctcatgagcttagctcagttggtagggacaatgcataatatatgtaa 34191326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 221
Target Start/End: Complemental strand, 14735962 - 14735892
Alignment:
Q  151 ttgtcctcatgagtttagctcagttggtagagacaatgcattacatatgtaaggtttgaagttcaaactcc 221  Q
    |||||||| |||| |||||| | ||||||  |||||||||| | |||||||||||| || |||||||||||    
T  14735962 ttgtcctcgtgagcttagcttaattggtatggacaatgcataaaatatgtaaggttcgaggttcaaactcc 14735892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 218
Target Start/End: Original strand, 19212951 - 19213017
Alignment:
Q  152 tgtcctcatgagtttagctcagttggtagagacaatgcattacatatgtaaggtttgaagttcaaac 218  Q
    ||||||||||||||||||||||||| |   |||||| ||| | ||||| |||||| |||||||||||    
T  19212951 tgtcctcatgagtttagctcagttgttttggacaatacataatatatgcaaggttcgaagttcaaac 19213017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 203
Target Start/End: Original strand, 21295393 - 21295443
Alignment:
Q  153 gtcctcatgagtttagctcagttggtagagacaatgcattacatatgtaag 203  Q
    ||||| |||||||||||||||||||||  |||||||||| | |||||||||    
T  21295393 gtccttatgagtttagctcagttggtaatgacaatgcataaaatatgtaag 21295443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 227
Target Start/End: Original strand, 24033731 - 24033805
Alignment:
Q  153 gtcctcatgagtttagctcagttggtagagacaatgcattacatatgtaaggtttgaagttcaaactccaaccac 227  Q
    |||||| |||| ||||||| ||||||||||||||||||| | ||||| || || |||||||| ||| || |||||    
T  24033731 gtcctcgtgagcttagctcggttggtagagacaatgcataaaatatgcaaagtgtgaagttcgaaccccgaccac 24033805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 221
Target Start/End: Original strand, 26999102 - 26999172
Alignment:
Q  151 ttgtcctcatgagtttagctcagttggtagagacaatgcattacatatgtaaggtttgaagttcaaactcc 221  Q
    |||||||| |||  |||| |||||||||||||||||||||| | ||||| ||||| ||  |||||||||||    
T  26999102 ttgtcctcgtgaacttagttcagttggtagagacaatgcataatatatgcaaggtctgcggttcaaactcc 26999172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 218
Target Start/End: Complemental strand, 43117250 - 43117192
Alignment:
Q  160 tgagtttagctcagttggtagagacaatgcattacatatgtaaggtttgaagttcaaac 218  Q
    ||||||||||||||||||||  |||||||||| | ||||| ||||| ||| ||||||||    
T  43117250 tgagtttagctcagttggtaaggacaatgcataatatatgcaaggtctgaggttcaaac 43117192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 218
Target Start/End: Complemental strand, 44488070 - 44488012
Alignment:
Q  160 tgagtttagctcagttggtagagacaatgcattacatatgtaaggtttgaagttcaaac 218  Q
    ||||||||| ||||||||||  |||||||||| | |||||||||||| | |||||||||    
T  44488070 tgagtttagttcagttggtaaggacaatgcataatatatgtaaggttcggagttcaaac 44488012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 160 - 221
Target Start/End: Original strand, 690789 - 690850
Alignment:
Q  160 tgagtttagctcagttggtagagacaatgcattacatatgtaaggtttgaagttcaaactcc 221  Q
    |||||||||||||||||| |||||||||| || | ||||| || || ||| |||||||||||    
T  690789 tgagtttagctcagttggaagagacaatgtataatatatgcaacgtctgaggttcaaactcc 690850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 153 - 206
Target Start/End: Original strand, 11560492 - 11560545
Alignment:
Q  153 gtcctcatgagtttagctcagttggtagagacaatgcattacatatgtaaggtt 206  Q
    ||||||||||| |||||||| ||||||| |||||||||| | ||||| ||||||    
T  11560492 gtcctcatgagcttagctcaattggtagggacaatgcataatatatgcaaggtt 11560545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 150 - 187
Target Start/End: Complemental strand, 15447790 - 15447753
Alignment:
Q  150 gttgtcctcatgagtttagctcagttggtagagacaat 187  Q
    ||||||||| |||||||||||||||||||| |||||||    
T  15447790 gttgtcctcgtgagtttagctcagttggtatagacaat 15447753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 153 - 206
Target Start/End: Complemental strand, 16221413 - 16221360
Alignment:
Q  153 gtcctcatgagtttagctcagttggtagagacaatgcattacatatgtaaggtt 206  Q
    |||||||||||||||||||||||||||   ||||||||| | ||||| ||||||    
T  16221413 gtcctcatgagtttagctcagttggtatgaacaatgcataaaatatgcaaggtt 16221360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 205
Target Start/End: Original strand, 24548110 - 24548163
Alignment:
Q  152 tgtcctcatgagtttagctcagttggtagagacaatgcattacatatgtaaggt 205  Q
    ||||||| |||||||| |||| |||||| ||||||||||| | |||||||||||    
T  24548110 tgtcctcgtgagtttaactcaattggtatagacaatgcataatatatgtaaggt 24548163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 151 - 228
Target Start/End: Original strand, 43424651 - 43424728
Alignment:
Q  151 ttgtcctcatgagtttagctcagttggtagagacaatgcattacatatgtaaggtttgaagttcaaactccaaccact 228  Q
    ||||||||||||| |||||||||||| | |  ||||||||| | ||||| || ||| | ||||||||| |||||||||    
T  43424651 ttgtcctcatgagcttagctcagttgattggaacaatgcataaaatatgcaaagttcggagttcaaaccccaaccact 43424728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 160 - 205
Target Start/End: Complemental strand, 44926461 - 44926416
Alignment:
Q  160 tgagtttagctcagttggtagagacaatgcattacatatgtaaggt 205  Q
    |||| ||| ||||||||||| ||||||||||||| |||||||||||    
T  44926461 tgagcttatctcagttggtaaagacaatgcattatatatgtaaggt 44926416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 191
Target Start/End: Original strand, 3708371 - 3708411
Alignment:
Q  151 ttgtcctcatgagtttagctcagttggtagagacaatgcat 191  Q
    |||||||||||||||||||||||||| |||  |||||||||    
T  3708371 ttgtcctcatgagtttagctcagttgataggaacaatgcat 3708411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 191
Target Start/End: Complemental strand, 11869045 - 11869005
Alignment:
Q  151 ttgtcctcatgagtttagctcagttggtagagacaatgcat 191  Q
    |||||||||||||||||||||||||| |||  |||||||||    
T  11869045 ttgtcctcatgagtttagctcagttgataggaacaatgcat 11869005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 217
Target Start/End: Original strand, 12303585 - 12303637
Alignment:
Q  165 ttagctcagttggtagagacaatgcattacatatgtaaggtttgaagttcaaa 217  Q
    ||||||||||||||| || ||||| || | ||||| |||||||||||||||||    
T  12303585 ttagctcagttggtaaagtcaatgtataatatatgcaaggtttgaagttcaaa 12303637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 145 - 221
Target Start/End: Original strand, 26400737 - 26400813
Alignment:
Q  145 attatgttgtcctcatgagtttagctcagttggtagagacaatgcattacatatgtaaggtttgaagttcaaactcc 221  Q
    |||||| |||||||||||| ||  |||||||||||  |||||||||| | ||||| |||||| |  |||||||||||    
T  26400737 attatggtgtcctcatgagctttactcagttggtaaggacaatgcataatatatgcaaggttgggtgttcaaactcc 26400813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 191
Target Start/End: Complemental strand, 35360438 - 35360398
Alignment:
Q  151 ttgtcctcatgagtttagctcagttggtagagacaatgcat 191  Q
    |||||||||||||||||||||||||| |||  |||||||||    
T  35360438 ttgtcctcatgagtttagctcagttgataggaacaatgcat 35360398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 153 - 227
Target Start/End: Complemental strand, 37054336 - 37054262
Alignment:
Q  153 gtcctcatgagtttagctcagttggtagagacaatgcattacatatgtaaggtttgaagttcaaactccaaccac 227  Q
    |||||||||||||||||||||||||||| |||||||||| | |||| ||||||| |  ||||||||||| |||||    
T  37054336 gtcctcatgagtttagctcagttggtagggacaatgcataatatatataaggttcggggttcaaactccgaccac 37054262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 142 - 227
Target Start/End: Original strand, 5015264 - 5015348
Alignment:
Q  142 attattatgttgtcctcatgagtttagctcagttggtagagacaatgcattacatatgtaaggtttgaagttcaaactccaaccac 227  Q
    ||||||||  ||||||| ||||||||||||||||||||| ||||||| || | ||||| |||||| | ||||||||| ||||||||    
T  5015264 attattatcatgtcctcgtgagtttagctcagttggtag-gacaatgaataatatatgcaaggttcggagttcaaaccccaaccac 5015348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 153 - 205
Target Start/End: Original strand, 18538602 - 18538654
Alignment:
Q  153 gtcctcatgagtttagctcagttggtagagacaatgcattacatatgtaaggt 205  Q
    |||||| ||||||||||| |||||||||||||||||||| | ||||| |||||    
T  18538602 gtcctcgtgagtttagctaagttggtagagacaatgcataatatatgcaaggt 18538654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 151 - 227
Target Start/End: Original strand, 18789028 - 18789104
Alignment:
Q  151 ttgtcctcatgagtttagctcagttggtagagacaatgcattacatatgtaaggtttgaagttcaaactccaaccac 227  Q
    |||||||| |||  ||||||||||||||||||||||||||| | ||||| |||||| |  |||||||| ||| ||||    
T  18789028 ttgtcctcgtgatattagctcagttggtagagacaatgcataaaatatgcaaggttcggggttcaaaccccagccac 18789104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 151 - 219
Target Start/End: Complemental strand, 37614496 - 37614428
Alignment:
Q  151 ttgtcctcatgagtttagctcagttggtagagacaatgcattacatatgtaaggtttgaagttcaaact 219  Q
    ||||| || |||| |||||||||||||||||||||| |||| | ||||| |||||| || |||||||||    
T  37614496 ttgtcgtcgtgagcttagctcagttggtagagacaacgcataatatatgcaaggttcgaggttcaaact 37614428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 151 - 218
Target Start/End: Original strand, 32565516 - 32565583
Alignment:
Q  151 ttgtcctcatgagtttagctcagttggtagagacaatgcattacatatgtaaggtttgaagttcaaac 218  Q
    |||||||| |||| ||||||||| |||||| || ||||||| | |||||||||||  |||||||||||    
T  32565516 ttgtcctcgtgagcttagctcagctggtagggataatgcataatatatgtaaggtccgaagttcaaac 32565583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 218
Target Start/End: Original strand, 6489000 - 6489066
Alignment:
Q  152 tgtcctcatgagtttagctcagttggtagagacaatgcattacatatgtaaggtttgaagttcaaac 218  Q
    ||||||| |||| |||||||||||||||| |||||||||| | ||||| ||||| ||  ||||||||    
T  6489000 tgtcctcgtgagcttagctcagttggtagggacaatgcataatatatgcaaggtctggggttcaaac 6489066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 227
Target Start/End: Original strand, 17230392 - 17230454
Alignment:
Q  165 ttagctcagttggtagagacaatgcattacatatgtaaggtttgaagttcaaactccaaccac 227  Q
    ||||||||||||  ||||||||||||| | ||||||||| || | |||||||||||| |||||    
T  17230392 ttagctcagttgacagagacaatgcataatatatgtaagattcggagttcaaactccgaccac 17230454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 205
Target Start/End: Complemental strand, 18489145 - 18489091
Alignment:
Q  151 ttgtcctcatgagtttagctcagttggtagagacaatgcattacatatgtaaggt 205  Q
    |||||||  |||||||||||||||||||| ||||||||||| | ||||| |||||    
T  18489145 ttgtccttgtgagtttagctcagttggtatagacaatgcataatatatgcaaggt 18489091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 217
Target Start/End: Original strand, 19248471 - 19248537
Alignment:
Q  151 ttgtcctcatgagtttagctcagttggtagagacaatgcattacatatgtaaggtttgaagttcaaa 217  Q
    |||||||| |||| ||||||||||||||| ||||||||||| | ||||| || |||||  |||||||    
T  19248471 ttgtcctcgtgagcttagctcagttggtatagacaatgcataatatatgcaatgtttggggttcaaa 19248537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 219
Target Start/End: Original strand, 35992107 - 35992161
Alignment:
Q  165 ttagctcagttggtagagacaatgcattacatatgtaaggtttgaagttcaaact 219  Q
    |||||||||||| |||||||||||||| | ||||||||||||   ||||||||||    
T  35992107 ttagctcagttgatagagacaatgcatgatatatgtaaggttcagagttcaaact 35992161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 153 - 218
Target Start/End: Complemental strand, 5551348 - 5551283
Alignment:
Q  153 gtcctcatgagtttagctcagttggtagagacaatgcattacatatgtaaggtttgaagttcaaac 218  Q
    ||||||||||| |||||||||||||| |  ||||||||| | ||||| ||||||||  ||||||||    
T  5551348 gtcctcatgagcttagctcagttggttggaacaatgcataaaatatgcaaggtttggggttcaaac 5551283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 148 - 205
Target Start/End: Original strand, 10199008 - 10199065
Alignment:
Q  148 atgttgtcctcatgagtttagctcagttggtagagacaatgcattacatatgtaaggt 205  Q
    ||||||||||| |||| |||||||||||||||  |||||||||| | |||| ||||||    
T  10199008 atgttgtcctcgtgagcttagctcagttggtatggacaatgcataatatatataaggt 10199065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 215
Target Start/End: Complemental strand, 12909134 - 12909074
Alignment:
Q  152 tgtcctcatgagtttagctcagttggtagagacaatgcattacatatgtaaggtttgaagttca 215  Q
    ||||||||||||||||||||||||| || | ||||| |||   ||||||||||||||| |||||    
T  12909134 tgtcctcatgagtttagctcagttgatataaacaatacat---atatgtaaggtttgaggttca 12909074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 154 - 191
Target Start/End: Original strand, 17861974 - 17862011
Alignment:
Q  154 tcctcatgagtttagctcagttggtagagacaatgcat 191  Q
    ||||| ||||||||||||||||||||| ||||||||||    
T  17861974 tcctcgtgagtttagctcagttggtagggacaatgcat 17862011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 165 - 218
Target Start/End: Complemental strand, 21657453 - 21657400
Alignment:
Q  165 ttagctcagttggtagagacaatgcattacatatgtaaggtttgaagttcaaac 218  Q
    |||| |||||| |||| |||||||||| | ||||||||||||||| ||||||||    
T  21657453 ttagttcagtttgtagggacaatgcataatatatgtaaggtttgaggttcaaac 21657400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 160 - 205
Target Start/End: Complemental strand, 28604478 - 28604433
Alignment:
Q  160 tgagtttagctcagttggtagagacaatgcattacatatgtaaggt 205  Q
    |||||||||||||||||||| ||||||||||| | | |||||||||    
T  28604478 tgagtttagctcagttggtaaagacaatgcataataaatgtaaggt 28604433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 185
Target Start/End: Complemental strand, 436638 - 436602
Alignment:
Q  149 tgttgtcctcatgagtttagctcagttggtagagaca 185  Q
    |||||||||| ||||||||||||||||||||| ||||    
T  436638 tgttgtcctcgtgagtttagctcagttggtagggaca 436602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 166 - 206
Target Start/End: Complemental strand, 5539746 - 5539706
Alignment:
Q  166 tagctcagttggtagagacaatgcattacatatgtaaggtt 206  Q
    |||||||||||||| ||||||||||| | ||||||||||||    
T  5539746 tagctcagttggtatagacaatgcataaaatatgtaaggtt 5539706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 191
Target Start/End: Original strand, 13351448 - 13351488
Alignment:
Q  151 ttgtcctcatgagtttagctcagttggtagagacaatgcat 191  Q
    |||||||||||||||||||||||||| |||  |||||||||    
T  13351448 ttgtcctcatgagtttagctcagttgataggaacaatgcat 13351488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 153 - 205
Target Start/End: Original strand, 15889405 - 15889457
Alignment:
Q  153 gtcctcatgagtttagctcagttggtagagacaatgcattacatatgtaaggt 205  Q
    |||||| |||| |||||||||||||||| |||||||||| | ||||| |||||    
T  15889405 gtcctcgtgagcttagctcagttggtagggacaatgcataatatatgcaaggt 15889457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 153 - 221
Target Start/End: Complemental strand, 17210776 - 17210708
Alignment:
Q  153 gtcctcatgagtttagctcagttggtagagacaatgcattacatatgtaaggtttgaagttcaaactcc 221  Q
    |||||| |||| |||||||||||||||| |||| ||||| | ||||| ||||| ||  |||||||||||    
T  17210776 gtcctcgtgagcttagctcagttggtagggacagtgcataatatatgcaaggtgtggggttcaaactcc 17210708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 153 - 197
Target Start/End: Original strand, 33133633 - 33133677
Alignment:
Q  153 gtcctcatgagtttagctcagttggtagagacaatgcattacata 197  Q
    |||||| |||| |||||||||||||||| |||||||||| |||||    
T  33133633 gtcctcgtgagcttagctcagttggtagggacaatgcataacata 33133677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 152 - 204
Target Start/End: Original strand, 34436844 - 34436896
Alignment:
Q  152 tgtcctcatgagtttagctcagttggtagagacaatgcattacatatgtaagg 204  Q
    ||||||| |||| |||||||||||||||| |||||||||| | ||||| ||||    
T  34436844 tgtcctcgtgagcttagctcagttggtagggacaatgcataatatatgcaagg 34436896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 191
Target Start/End: Original strand, 37461789 - 37461829
Alignment:
Q  151 ttgtcctcatgagtttagctcagttggtagagacaatgcat 191  Q
    |||||||||||||||||||||||||| |||  |||||||||    
T  37461789 ttgtcctcatgagtttagctcagttgataggaacaatgcat 37461829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 20)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 153 - 221
Target Start/End: Original strand, 2662086 - 2662154
Alignment:
Q  153 gtcctcatgagtttagctcagttggtagagacaatgcattacatatgtaaggtttgaagttcaaactcc 221  Q
    |||||||| |||||||||||||||||| ||||||||||| | ||||| |||||| |||||| |||||||    
T  2662086 gtcctcataagtttagctcagttggtaaagacaatgcataatatatgcaaggttcgaagtttaaactcc 2662154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 151 - 227
Target Start/End: Original strand, 7829888 - 7829964
Alignment:
Q  151 ttgtcctcatgagtttagctcagttggtagagacaatgcattacatatgtaaggtttgaagttcaaactccaaccac 227  Q
    |||||||| |||||||| |||||||| ||  |||||||||| | ||||||||||| |||||||| || ||| |||||    
T  7829888 ttgtcctcgtgagtttaactcagttgatatggacaatgcataatatatgtaaggtctgaagttcgaaatccgaccac 7829964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 153 - 208
Target Start/End: Original strand, 48376829 - 48376884
Alignment:
Q  153 gtcctcatgagtttagctcagttggtagagacaatgcattacatatgtaaggtttg 208  Q
    |||||| |||| ||||||||||||||| ||| ||||||| | ||||||||||||||    
T  48376829 gtcctcgtgagcttagctcagttggtaaagataatgcataatatatgtaaggtttg 48376884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 219
Target Start/End: Original strand, 2078250 - 2078300
Alignment:
Q  169 ctcagttggtagagacaatgcattacatatgtaaggtttgaagttcaaact 219  Q
    ||||||||||||||||||||||| | ||||| ||||||||  |||||||||    
T  2078250 ctcagttggtagagacaatgcataatatatgcaaggtttggggttcaaact 2078300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 227
Target Start/End: Original strand, 33223862 - 33223935
Alignment:
Q  153 gtcctcatgagtttagctcagttggtagagacaatgcattacatatgtaaggtttgaagttcaaactccaaccac 227  Q
    |||||| |||| ||||||||||||||||| ||||||||| | ||||| |||||| | ||||||||| ||| ||||    
T  33223862 gtcctcgtgagcttagctcagttggtagaaacaatgcataatatatgcaaggttcg-agttcaaacaccatccac 33223935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 191
Target Start/End: Original strand, 53429149 - 53429187
Alignment:
Q  153 gtcctcatgagtttagctcagttggtagagacaatgcat 191  Q
    |||||| |||||||||||||||||||| |||||||||||    
T  53429149 gtcctcgtgagtttagctcagttggtatagacaatgcat 53429187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 157 - 202
Target Start/End: Original strand, 12408176 - 12408221
Alignment:
Q  157 tcatgagtttagctcagttggtagagacaatgcattacatatgtaa 202  Q
    |||||||||||| ||||||||||| |||||||||| | ||||||||    
T  12408176 tcatgagtttagttcagttggtagggacaatgcataatatatgtaa 12408221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 153 - 206
Target Start/End: Original strand, 29631180 - 29631233
Alignment:
Q  153 gtcctcatgagtttagctcagttggtagagacaatgcattacatatgtaaggtt 206  Q
    ||||||||||| |||||||||||||||  |||||||||| | ||||| ||||||    
T  29631180 gtcctcatgagcttagctcagttggtatggacaatgcataatatatgcaaggtt 29631233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 160 - 217
Target Start/End: Original strand, 29791777 - 29791834
Alignment:
Q  160 tgagtttagctcagttggtagagacaatgcattacatatgtaaggtttgaagttcaaa 217  Q
    |||||||| |||||||| |||| ||||| ||| | ||||||||||||||| |||||||    
T  29791777 tgagtttaactcagttgatagaaacaatacataatatatgtaaggtttgaggttcaaa 29791834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 160 - 217
Target Start/End: Original strand, 35392004 - 35392061
Alignment:
Q  160 tgagtttagctcagttggtagagacaatgcattacatatgtaaggtttgaagttcaaa 217  Q
    ||||||||||||||||||||  |||||| ||| | ||||||||||||||  |||||||    
T  35392004 tgagtttagctcagttggtaatgacaatacataatatatgtaaggtttggggttcaaa 35392061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 154 - 219
Target Start/End: Original strand, 36690007 - 36690072
Alignment:
Q  154 tcctcatgagtttagctcagttggtagagacaatgcattacatatgtaaggtttgaagttcaaact 219  Q
    |||||||||||||| ||  ||||||||  ||||||||| | |||||||||||| | ||||||||||    
T  36690007 tcctcatgagtttaactatgttggtaggaacaatgcataatatatgtaaggttcggagttcaaact 36690072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 165 - 214
Target Start/End: Original strand, 45254237 - 45254286
Alignment:
Q  165 ttagctcagttggtagagacaatgcattacatatgtaaggtttgaagttc 214  Q
    |||||||||||||||  |||||||||| | |||||||||||||| |||||    
T  45254237 ttagctcagttggtaaggacaatgcataatatatgtaaggtttggagttc 45254286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 165 - 222
Target Start/End: Original strand, 48688121 - 48688177
Alignment:
Q  165 ttagctcagttggtagagacaatgcattacatatgtaaggtttgaagttcaaactcca 222  Q
    |||||||||||||||  |||||||||| | ||||||||||||||| |||| |||||||    
T  48688121 ttagctcagttggtat-gacaatgcataatatatgtaaggtttgaggttcgaactcca 48688177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 160 - 209
Target Start/End: Original strand, 49088753 - 49088802
Alignment:
Q  160 tgagtttagctcagttggtagagacaatgcattacatatgtaaggtttga 209  Q
    ||||||||||||||||| || | ||||||||| | |||||||||||||||    
T  49088753 tgagtttagctcagttgatataaacaatgcataaaatatgtaaggtttga 49088802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 151 - 208
Target Start/End: Original strand, 51505865 - 51505922
Alignment:
Q  151 ttgtcctcatgagtttagctcagttggtagagacaatgcattacatatgtaaggtttg 208  Q
    ||||||| |||||||||||||||||| ||  |||||||||| | ||||| ||||||||    
T  51505865 ttgtccttatgagtttagctcagttgatatggacaatgcataaaatatgcaaggtttg 51505922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 159 - 208
Target Start/End: Complemental strand, 54230160 - 54230111
Alignment:
Q  159 atgagtttagctcagttggtagagacaatgcattacatatgtaaggtttg 208  Q
    |||||||||||||||||||||  |||||||||| | ||||| ||||||||    
T  54230160 atgagtttagctcagttggtaaggacaatgcataatatatgcaaggtttg 54230111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 191
Target Start/End: Original strand, 916195 - 916235
Alignment:
Q  151 ttgtcctcatgagtttagctcagttggtagagacaatgcat 191  Q
    |||||||||||||||||||||||||| |||  |||||||||    
T  916195 ttgtcctcatgagtttagctcagttgataggaacaatgcat 916235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 153 - 205
Target Start/End: Complemental strand, 7464558 - 7464506
Alignment:
Q  153 gtcctcatgagtttagctcagttggtagagacaatgcattacatatgtaaggt 205  Q
    |||||| |||| ||| |||||||||||| |||||||||| | |||||||||||    
T  7464558 gtcctcgtgagcttaactcagttggtagggacaatgcataatatatgtaaggt 7464506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 153 - 205
Target Start/End: Complemental strand, 18870792 - 18870740
Alignment:
Q  153 gtcctcatgagtttagctcagttggtagagacaatgcattacatatgtaaggt 205  Q
    |||||| |||| |||||||||||||||| |||||||||| | ||||| |||||    
T  18870792 gtcctcgtgagcttagctcagttggtagggacaatgcataatatatgcaaggt 18870740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 227
Target Start/End: Original strand, 32632313 - 32632389
Alignment:
Q  151 ttgtcctcatgagtttagctcagttggtagagacaatgcattacatatgtaaggtttgaagttcaaactccaaccac 227  Q
    |||||||| |||| || |||||||||||| | ||||||||| | ||||||||  |||| ||||||||| || |||||    
T  32632313 ttgtcctcgtgagctttgctcagttggtataaacaatgcataatatatgtaaaatttggagttcaaaccccgaccac 32632389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 18)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 160 - 227
Target Start/End: Original strand, 23221393 - 23221460
Alignment:
Q  160 tgagtttagctcagttggtagagacaatgcattacatatgtaaggtttgaagttcaaactccaaccac 227  Q
    |||| ||| ||||||||||||||||||||||| | |||||||||||| |  |||||||||||||||||    
T  23221393 tgagcttaactcagttggtagagacaatgcataatatatgtaaggttcgtggttcaaactccaaccac 23221460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 160 - 227
Target Start/End: Original strand, 43267458 - 43267525
Alignment:
Q  160 tgagtttagctcagttggtagagacaatgcattacatatgtaaggtttgaagttcaaactccaaccac 227  Q
    ||||||||| |||| |||| |||||||||||| | |||||||||||||||||||||||| || |||||    
T  43267458 tgagtttagttcagctggttgagacaatgcataaaatatgtaaggtttgaagttcaaacaccgaccac 43267525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 151 - 203
Target Start/End: Original strand, 22267573 - 22267625
Alignment:
Q  151 ttgtcctcatgagtttagctcagttggtagagacaatgcattacatatgtaag 203  Q
    |||||||| |||||||| ||||||||||||||||||||||| | |||||||||    
T  22267573 ttgtcctcgtgagtttaactcagttggtagagacaatgcataatatatgtaag 22267625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 152 - 227
Target Start/End: Original strand, 30857241 - 30857316
Alignment:
Q  152 tgtcctcatgagtttagctcagttggtagagacaatgcattacatatgtaaggtttgaagttcaaactccaaccac 227  Q
    ||||||| ||||||||||| ||||||||  |||||||||| | ||||| |||||||  ||||||||| ||||||||    
T  30857241 tgtcctcgtgagtttagcttagttggtatggacaatgcataatatatgcaaggttttgagttcaaaccccaaccac 30857316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 153 - 218
Target Start/End: Complemental strand, 40187703 - 40187638
Alignment:
Q  153 gtcctcatgagtttagctcagttggtagagacaatgcattacatatgtaaggtttgaagttcaaac 218  Q
    ||||||||||| ||| |||||||||||| |||||||||| | ||||||||||| ||  ||||||||    
T  40187703 gtcctcatgagcttaactcagttggtagggacaatgcataatatatgtaaggtctgcggttcaaac 40187638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 205
Target Start/End: Complemental strand, 20115645 - 20115597
Alignment:
Q  157 tcatgagtttagctcagttggtagagacaatgcattacatatgtaaggt 205  Q
    |||||||||||||||||||||||| ||||||||||   |||||||||||    
T  20115645 tcatgagtttagctcagttggtagggacaatgcatattatatgtaaggt 20115597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 152 - 220
Target Start/End: Original strand, 34773224 - 34773292
Alignment:
Q  152 tgtcctcatgagtttagctcagttggtagagacaatgcattacatatgtaaggtttgaagttcaaactc 220  Q
    ||||||||||| ||||| ||||||||||| |||||||||| | ||||| ||||| ||| ||| ||||||    
T  34773224 tgtcctcatgactttagttcagttggtagggacaatgcataatatatgcaaggtatgaggtttaaactc 34773292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 152 - 191
Target Start/End: Original strand, 36803831 - 36803870
Alignment:
Q  152 tgtcctcatgagtttagctcagttggtagagacaatgcat 191  Q
    ||||||| |||| |||||||||||||||||||||||||||    
T  36803831 tgtcctcgtgagcttagctcagttggtagagacaatgcat 36803870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 160 - 227
Target Start/End: Original strand, 44651502 - 44651569
Alignment:
Q  160 tgagtttagctcagttggtagagacaatgcattacatatgtaaggtttgaagttcaaactccaaccac 227  Q
    ||||||||||||||||||||  |||  ||||| | ||||||||||||||  |||||||| ||||||||    
T  44651502 tgagtttagctcagttggtatggaccttgcataaaatatgtaaggtttggggttcaaaccccaaccac 44651569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 205
Target Start/End: Original strand, 24839480 - 24839534
Alignment:
Q  151 ttgtcctcatgagtttagctcagttggtagagacaatgcattacatatgtaaggt 205  Q
    |||||||| |||| ||| ||||||||||| ||||||||||| | |||||||||||    
T  24839480 ttgtcctcgtgagcttaactcagttggtatagacaatgcataaaatatgtaaggt 24839534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 191
Target Start/End: Original strand, 28703502 - 28703540
Alignment:
Q  153 gtcctcatgagtttagctcagttggtagagacaatgcat 191  Q
    |||||| |||||||||||||||||||| |||||||||||    
T  28703502 gtcctcgtgagtttagctcagttggtaaagacaatgcat 28703540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 228
Target Start/End: Complemental strand, 48103744 - 48103666
Alignment:
Q  150 gttgtcctcatgagtttagctcagttggtagagacaatgcattacatatgtaaggtttgaagttcaaactccaaccact 228  Q
    ||||||||| |||| ||| |||||||||| | |||||||||| | ||||| |||||| |  |||||||||||| |||||    
T  48103744 gttgtcctcgtgagcttaactcagttggttgggacaatgcataaaatatgcaaggttcggggttcaaactccagccact 48103666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 174 - 227
Target Start/End: Complemental strand, 46849153 - 46849100
Alignment:
Q  174 ttggtagagacaatgcattacatatgtaaggtttgaagttcaaactccaaccac 227  Q
    |||||||||||||||||| | |||||||| ||||| ||||||||| || |||||    
T  46849153 ttggtagagacaatgcataatatatgtaaagtttggagttcaaaccccgaccac 46849100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 191
Target Start/End: Original strand, 29488398 - 29488438
Alignment:
Q  151 ttgtcctcatgagtttagctcagttggtagagacaatgcat 191  Q
    |||||||||||||||||||||||||| |||  |||||||||    
T  29488398 ttgtcctcatgagtttagctcagttgataggaacaatgcat 29488438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 191
Target Start/End: Complemental strand, 32869642 - 32869602
Alignment:
Q  151 ttgtcctcatgagtttagctcagttggtagagacaatgcat 191  Q
    |||||| ||| |||||||||||||||||||||||| |||||    
T  32869642 ttgtccccataagtttagctcagttggtagagacattgcat 32869602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 191
Target Start/End: Complemental strand, 33232780 - 33232740
Alignment:
Q  151 ttgtcctcatgagtttagctcagttggtagagacaatgcat 191  Q
    |||||||||||||||||||||||||| |||  |||||||||    
T  33232780 ttgtcctcatgagtttagctcagttgataggaacaatgcat 33232740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 191
Target Start/End: Complemental strand, 34284922 - 34284882
Alignment:
Q  151 ttgtcctcatgagtttagctcagttggtagagacaatgcat 191  Q
    |||||||||||||||||||||||||| |||  |||||||||    
T  34284922 ttgtcctcatgagtttagctcagttgataggaacaatgcat 34284882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 161 - 217
Target Start/End: Original strand, 35836021 - 35836077
Alignment:
Q  161 gagtttagctcagttggtagagacaatgcattacatatgtaaggtttgaagttcaaa 217  Q
    |||||||||||||||| ||||||||||||||   |||| |||| ||||| |||||||    
T  35836021 gagtttagctcagttgatagagacaatgcatagtatatataagatttgaggttcaaa 35836077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 38; Significance: 0.000000000002; HSPs: 30)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 151 - 220
Target Start/End: Complemental strand, 48131297 - 48131228
Alignment:
Q  151 ttgtcctcatgagtttagctcagttggtagagacaatgcattacatatgtaaggtttgaagttcaaactc 220  Q
    |||||||| |||||||| ||||||||| ||||| ||||||| | ||||||||||| || |||||||||||    
T  48131297 ttgtcctcgtgagtttaactcagttggcagagataatgcataatatatgtaaggtctggagttcaaactc 48131228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 153 - 205
Target Start/End: Complemental strand, 36371107 - 36371055
Alignment:
Q  153 gtcctcatgagtttagctcagttggtagagacaatgcattacatatgtaaggt 205  Q
    |||||| |||| ||||||||||||||||||||||||||| | |||||||||||    
T  36371107 gtcctcgtgagcttagctcagttggtagagacaatgcataatatatgtaaggt 36371055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 153 - 227
Target Start/End: Complemental strand, 29234041 - 29233967
Alignment:
Q  153 gtcctcatgagtttagctcagttggtagagacaatgcattacatatgtaaggtttgaagttcaaactccaaccac 227  Q
    |||||| |||||||||||||||||||| ||||||||||| | ||||| ||||| ||  |||| ||| ||||||||    
T  29234041 gtcctcgtgagtttagctcagttggtatagacaatgcataaaatatgcaaggtctggggttcgaaccccaaccac 29233967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 153 - 227
Target Start/End: Original strand, 43356430 - 43356503
Alignment:
Q  153 gtcctcatgagtttagctcagttggtagagacaatgcattacatatgtaaggtttgaagttcaaactccaaccac 227  Q
    ||||||||||  |||| ||||||||||| |||||||||| | |||||||||||||| ||||||||| || |||||    
T  43356430 gtcctcatgaacttagttcagttggtag-gacaatgcataatatatgtaaggtttggagttcaaaccccgaccac 43356503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 153 - 227
Target Start/End: Original strand, 44243867 - 44243941
Alignment:
Q  153 gtcctcatgagtttagctcagttggtagagacaatgcattacatatgtaaggtttgaagttcaaactccaaccac 227  Q
    |||||| |||||||||||||||||||||  ||||||||| | |||||||||||    ||||||||| ||||||||    
T  44243867 gtcctcgtgagtttagctcagttggtaggaacaatgcataatatatgtaaggtccagagttcaaaccccaaccac 44243941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 151 - 216
Target Start/End: Complemental strand, 2817442 - 2817377
Alignment:
Q  151 ttgtcctcatgagtttagctcagttggtagagacaatgcattacatatgtaaggtttgaagttcaa 216  Q
    |||||| ||||| ||||||||||||||||  |||||||||| | |||||||||||  |||||||||    
T  2817442 ttgtccccatgaatttagctcagttggtaaggacaatgcataatatatgtaaggtccgaagttcaa 2817377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 170 - 227
Target Start/End: Original strand, 32923829 - 32923886
Alignment:
Q  170 tcagttggtagagacaatgcattacatatgtaaggtttgaagttcaaactccaaccac 227  Q
    ||||||||||| |||||||||| | ||||| ||||| ||||||||||||||| |||||    
T  32923829 tcagttggtagggacaatgcataatatatgaaaggtctgaagttcaaactccgaccac 32923886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 218
Target Start/End: Complemental strand, 4806845 - 4806797
Alignment:
Q  170 tcagttggtagagacaatgcattacatatgtaaggtttgaagttcaaac 218  Q
    ||||||||||||||||||| || | ||||||||||||||| ||||||||    
T  4806845 tcagttggtagagacaatgtataatatatgtaaggtttgaggttcaaac 4806797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 151 - 191
Target Start/End: Original strand, 7925356 - 7925396
Alignment:
Q  151 ttgtcctcatgagtttagctcagttggtagagacaatgcat 191  Q
    |||||||| |||| |||||||||||||||||||||||||||    
T  7925356 ttgtcctcgtgagcttagctcagttggtagagacaatgcat 7925396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 151 - 191
Target Start/End: Original strand, 11014224 - 11014264
Alignment:
Q  151 ttgtcctcatgagtttagctcagttggtagagacaatgcat 191  Q
    |||||||| |||||||||||||||||||||||||| |||||    
T  11014224 ttgtcctcgtgagtttagctcagttggtagagacagtgcat 11014264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 153 - 205
Target Start/End: Complemental strand, 36672781 - 36672729
Alignment:
Q  153 gtcctcatgagtttagctcagttggtagagacaatgcattacatatgtaaggt 205  Q
    ||||||||||||||| |||||||| |||||||||| ||| | |||||||||||    
T  36672781 gtcctcatgagtttaactcagttgatagagacaatccataatatatgtaaggt 36672729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 150 - 202
Target Start/End: Complemental strand, 41573339 - 41573287
Alignment:
Q  150 gttgtcctcatgagtttagctcagttggtagagacaatgcattacatatgtaa 202  Q
    ||||||||| |||||||| |||||||||||| |||||||||| | ||||||||    
T  41573339 gttgtcctcgtgagtttaactcagttggtagggacaatgcataatatatgtaa 41573287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 152 - 227
Target Start/End: Complemental strand, 3693864 - 3693789
Alignment:
Q  152 tgtcctcatgagtttagctcagttggtagagacaatgcattacatatgtaaggtttgaagttcaaactccaaccac 227  Q
    ||||||| |||| |||||||||||| || |||||| |||| | ||||||||||| ||| |||||||| || |||||    
T  3693864 tgtcctcgtgagcttagctcagttgatatagacaaagcataatatatgtaaggtctgaggttcaaaccccgaccac 3693789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 151 - 218
Target Start/End: Original strand, 13590102 - 13590169
Alignment:
Q  151 ttgtcctcatgagtttagctcagttggtagagacaatgcattacatatgtaaggtttgaagttcaaac 218  Q
    |||||||| |||| ||||||||||||||   |||||||||| | |||||||||||| | |||||||||    
T  13590102 ttgtcctcgtgagcttagctcagttggtttggacaatgcataaaatatgtaaggttcggagttcaaac 13590169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 210
Target Start/End: Complemental strand, 11242045 - 11241995
Alignment:
Q  160 tgagtttagctcagttggtagagacaatgcattacatatgtaaggtttgaa 210  Q
    |||||||| ||||||||  ||||||||||||| | ||||||||||||||||    
T  11242045 tgagtttaactcagttgacagagacaatgcataatatatgtaaggtttgaa 11241995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 207
Target Start/End: Complemental strand, 17188731 - 17188681
Alignment:
Q  157 tcatgagtttagctcagttggtagagacaatgcattacatatgtaaggttt 207  Q
    ||||||| |||||||||||||||  |||||||||| | |||||||||||||    
T  17188731 tcatgagcttagctcagttggtatggacaatgcataaaatatgtaaggttt 17188681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 206
Target Start/End: Complemental strand, 30678881 - 30678827
Alignment:
Q  152 tgtcctcatgagtttagctcagttggtagagacaatgcattacatatgtaaggtt 206  Q
    ||||||| |||| ||| |||||||||||| |||||||||| | ||||||||||||    
T  30678881 tgtcctcgtgagcttaactcagttggtagggacaatgcataatatatgtaaggtt 30678827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 218
Target Start/End: Complemental strand, 42045440 - 42045374
Alignment:
Q  152 tgtcctcatgagtttagctcagttggtagagacaatgcattacatatgtaaggtttgaagttcaaac 218  Q
    ||||||| |||| |||||||||||||||  |||||||||| | ||||| ||||| || |||||||||    
T  42045440 tgtcctcgtgagcttagctcagttggtatggacaatgcataatatatgcaaggtctggagttcaaac 42045374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 205
Target Start/End: Complemental strand, 52441580 - 52441526
Alignment:
Q  151 ttgtcctcatgagtttagctcagttggtagagacaatgcattacatatgtaaggt 205  Q
    |||||||| |||| ||||||||||||||| ||||||||||| | ||||| |||||    
T  52441580 ttgtcctcgtgagcttagctcagttggtatagacaatgcataatatatgcaaggt 52441526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 150 - 191
Target Start/End: Complemental strand, 7484764 - 7484723
Alignment:
Q  150 gttgtcctcatgagtttagctcagttggtagagacaatgcat 191  Q
    ||||||||| |||| ||||||||| |||||||||||||||||    
T  7484764 gttgtcctcgtgagcttagctcagctggtagagacaatgcat 7484723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 151 - 208
Target Start/End: Original strand, 8153127 - 8153184
Alignment:
Q  151 ttgtcctcatgagtttagctcagttggtagagacaatgcattacatatgtaaggtttg 208  Q
    |||| ||| |||||||| ||||||||||| ||||||||||| | ||||||||| ||||    
T  8153127 ttgtgctcgtgagtttaactcagttggtatagacaatgcataatatatgtaagatttg 8153184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 159 - 208
Target Start/End: Original strand, 13261171 - 13261220
Alignment:
Q  159 atgagtttagctcagttggtagagacaatgcattacatatgtaaggtttg 208  Q
    ||||||||| ||||||||||| |||||||| || | ||||||||||||||    
T  13261171 atgagtttaactcagttggtaaagacaatgtataatatatgtaaggtttg 13261220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 150 - 227
Target Start/End: Complemental strand, 22388245 - 22388168
Alignment:
Q  150 gttgtcctcatgagtttagctcagttggtagagacaatgcattacatatgtaaggtttgaagttcaaactccaaccac 227  Q
    ||||||||| | |||||| || ||||| ||| |||||||||| | |||||||| ||| ||  ||||||||||||||||    
T  22388245 gttgtcctcgtaagtttaacttagttgatagggacaatgcataatatatgtaacgttcgagattcaaactccaaccac 22388168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 160 - 205
Target Start/End: Complemental strand, 47961349 - 47961304
Alignment:
Q  160 tgagtttagctcagttggtagagacaatgcattacatatgtaaggt 205  Q
    |||||||||||||||||| ||||||||||||| | ||||| |||||    
T  47961349 tgagtttagctcagttggcagagacaatgcataatatatgcaaggt 47961304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 154 - 206
Target Start/End: Original strand, 2613717 - 2613769
Alignment:
Q  154 tcctcatgagtttagctcagttggtagagacaatgcattacatatgtaaggtt 206  Q
    ||||| |||| |||||||||||||||  |||||||||| | ||||||||||||    
T  2613717 tcctcgtgagcttagctcagttggtatggacaatgcataaaatatgtaaggtt 2613769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 153 - 205
Target Start/End: Complemental strand, 3528536 - 3528484
Alignment:
Q  153 gtcctcatgagtttagctcagttggtagagacaatgcattacatatgtaaggt 205  Q
    |||||| ||||||||||||||||| |||| |||||| || | |||||||||||    
T  3528536 gtcctcgtgagtttagctcagttgatagaaacaatgtataatatatgtaaggt 3528484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 152 - 200
Target Start/End: Original strand, 15729423 - 15729471
Alignment:
Q  152 tgtcctcatgagtttagctcagttggtagagacaatgcattacatatgt 200  Q
    ||||||| |||| ||| ||||||||||||||||||||||| | ||||||    
T  15729423 tgtcctcgtgagcttaactcagttggtagagacaatgcataatatatgt 15729471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 153 - 205
Target Start/End: Complemental strand, 21400090 - 21400038
Alignment:
Q  153 gtcctcatgagtttagctcagttggtagagacaatgcattacatatgtaaggt 205  Q
    |||||| |||| |||||||||||||||| |||||||||| | ||||| |||||    
T  21400090 gtcctcgtgagcttagctcagttggtagggacaatgcataatatatgcaaggt 21400038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 182 - 226
Target Start/End: Original strand, 23334611 - 23334655
Alignment:
Q  182 gacaatgcattacatatgtaaggtttgaagttcaaactccaacca 226  Q
    |||||||||| | ||||| ||||||||||||||||||||| ||||    
T  23334611 gacaatgcataaaatatgcaaggtttgaagttcaaactccgacca 23334655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 153 - 193
Target Start/End: Original strand, 40693680 - 40693720
Alignment:
Q  153 gtcctcatgagtttagctcagttggtagagacaatgcatta 193  Q
    |||||| ||||||||||||||||||||  ||||||||||||    
T  40693680 gtcctcgtgagtttagctcagttggtaaggacaatgcatta 40693720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 37; Significance: 0.000000000006; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 151 - 199
Target Start/End: Original strand, 13575281 - 13575329
Alignment:
Q  151 ttgtcctcatgagtttagctcagttggtagagacaatgcattacatatg 199  Q
    |||||||| ||||||||||||||||||||| |||||||||| |||||||    
T  13575281 ttgtcctcgtgagtttagctcagttggtagggacaatgcataacatatg 13575329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 151 - 217
Target Start/End: Complemental strand, 1230730 - 1230664
Alignment:
Q  151 ttgtcctcatgagtttagctcagttggtagagacaatgcattacatatgtaaggtttgaagttcaaa 217  Q
    ||||||||  ||||||| ||||||||||||  ||||||||| | ||||||||||||||| |||||||    
T  1230730 ttgtcctcgcgagtttaactcagttggtaggaacaatgcataatatatgtaaggtttgaggttcaaa 1230664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 153 - 227
Target Start/End: Original strand, 11708980 - 11709054
Alignment:
Q  153 gtcctcatgagtttagctcagttggtagagacaatgcattacatatgtaaggtttgaagttcaaactccaaccac 227  Q
    |||||| |||| |||||||||||||||| |||||||||| | ||||| |||||  ||||||||||| || |||||    
T  11708980 gtcctcgtgagcttagctcagttggtagggacaatgcataatatatgcaaggtccgaagttcaaaccccgaccac 11709054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 174 - 223
Target Start/End: Original strand, 12959304 - 12959353
Alignment:
Q  174 ttggtagagacaatgcattacatatgtaaggtttgaagttcaaactccaa 223  Q
    |||||||| ||||||||| | ||||||||||||||||||| |||||||||    
T  12959304 ttggtagaaacaatgcataatatatgtaaggtttgaagtttaaactccaa 12959353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 160 - 225
Target Start/End: Original strand, 42700506 - 42700571
Alignment:
Q  160 tgagtttagctcagttggtagagacaatgcattacatatgtaaggtttgaagttcaaactccaacc 225  Q
    |||| ||| ||| ||||||||||||||||||| | ||||| ||||| ||| |||||||||||||||    
T  42700506 tgagcttaactcggttggtagagacaatgcataatatatgcaaggtatgaggttcaaactccaacc 42700571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 162 - 227
Target Start/End: Original strand, 43778022 - 43778087
Alignment:
Q  162 agtttagctcagttggtagagacaatgcattacatatgtaaggtttgaagttcaaactccaaccac 227  Q
    |||||| ||||||||||| ||||||||||| | ||||| ||||| ||| ||||||||||| |||||    
T  43778022 agtttaactcagttggtatagacaatgcataaaatatgcaaggtctgaggttcaaactccgaccac 43778087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 153 - 205
Target Start/End: Complemental strand, 37015903 - 37015851
Alignment:
Q  153 gtcctcatgagtttagctcagttggtagagacaatgcattacatatgtaaggt 205  Q
    |||||| |||| ||||||||||||||||||||||||||| | ||||| |||||    
T  37015903 gtcctcgtgagcttagctcagttggtagagacaatgcataatatatgcaaggt 37015851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 154 - 221
Target Start/End: Original strand, 10152451 - 10152518
Alignment:
Q  154 tcctcatgagtttagctcagttggtagagacaatgcattacatatgtaaggtttgaagttcaaactcc 221  Q
    ||||| |||| ||||||||||||||| |||||||| || | ||||| ||||||||| |||| ||||||    
T  10152451 tcctcgtgagcttagctcagttggtatagacaatgtataaaatatgcaaggtttgaggttcgaactcc 10152518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 153 - 204
Target Start/End: Original strand, 39164975 - 39165026
Alignment:
Q  153 gtcctcatgagtttagctcagttggtagagacaatgcattacatatgtaagg 204  Q
    |||| |||||| ||||||||||||||||||||| ||||| ||||||| ||||    
T  39164975 gtccccatgagcttagctcagttggtagagacattgcataacatatgcaagg 39165026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 191
Target Start/End: Original strand, 6008658 - 6008696
Alignment:
Q  153 gtcctcatgagtttagctcagttggtagagacaatgcat 191  Q
    |||||||||||||||||||||||||||  ||||||||||    
T  6008658 gtcctcatgagtttagctcagttggtattgacaatgcat 6008696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 221
Target Start/End: Original strand, 7553671 - 7553741
Alignment:
Q  151 ttgtcctcatgagtttagctcagttggtagagacaatgcattacatatgtaaggtttgaagttcaaactcc 221  Q
    |||||||| |||||||| |||||||||||| |||||||||| | ||||| |||||   | |||||||||||    
T  7553671 ttgtcctcgtgagtttaactcagttggtagggacaatgcataatatatgcaaggtccaaggttcaaactcc 7553741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 193
Target Start/End: Complemental strand, 38204477 - 38204435
Alignment:
Q  151 ttgtcctcatgagtttagctcagttggtagagacaatgcatta 193  Q
    |||||||| |||| ||||||||||||||| |||||||||||||    
T  38204477 ttgtcctcgtgagcttagctcagttggtaaagacaatgcatta 38204435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 218
Target Start/End: Original strand, 39821877 - 39821943
Alignment:
Q  152 tgtcctcatgagtttagctcagttggtagagacaatgcattacatatgtaaggtttgaagttcaaac 218  Q
    ||||||| |||| |||||||||||||||| |||||||||| | ||||| ||||| ||  ||||||||    
T  39821877 tgtcctcgtgagcttagctcagttggtagggacaatgcataatatatgcaaggtctggggttcaaac 39821943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 203
Target Start/End: Original strand, 44293569 - 44293619
Alignment:
Q  153 gtcctcatgagtttagctcagttggtagagacaatgcattacatatgtaag 203  Q
    |||||| |||| ||||||||||||||| ||||||||||| | |||||||||    
T  44293569 gtcctcgtgagcttagctcagttggtatagacaatgcataatatatgtaag 44293619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 9656063 - 9655990
Alignment:
Q  154 tcctcatgagtttagctcagttggtagagacaatgcattacatatgtaaggtttgaagttcaaactccaaccac 227  Q
    |||||||||| |||||||||||||||  |||||||||| | ||||| |||||  || |||| ||| ||||||||    
T  9656063 tcctcatgagcttagctcagttggtaaggacaatgcataaaatatgcaaggtccgaggttcgaaccccaaccac 9655990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 228
Target Start/End: Complemental strand, 3672676 - 3672608
Alignment:
Q  160 tgagtttagctcagttggtagagacaatgcattacatatgtaaggtttgaagttcaaactccaaccact 228  Q
    |||||||| |||||||||| |||||||||||| | ||||| |||||||   |||||||| || ||||||    
T  3672676 tgagtttaactcagttggttgagacaatgcataaaatatgcaaggtttagggttcaaaccccgaccact 3672608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 191
Target Start/End: Complemental strand, 5325576 - 5325536
Alignment:
Q  151 ttgtcctcatgagtttagctcagttggtagagacaatgcat 191  Q
    |||||||| ||||||||||||||||| | ||||||||||||    
T  5325576 ttgtcctcgtgagtttagctcagttgattgagacaatgcat 5325536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 221
Target Start/End: Complemental strand, 6038330 - 6038274
Alignment:
Q  165 ttagctcagttggtagagacaatgcattacatatgtaaggtttgaagttcaaactcc 221  Q
    |||||||||||| ||  |||||||||| | ||||||||||| || ||||||||||||    
T  6038330 ttagctcagttgatatggacaatgcataatatatgtaaggtctggagttcaaactcc 6038274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 154 - 206
Target Start/End: Complemental strand, 8717541 - 8717489
Alignment:
Q  154 tcctcatgagtttagctcagttggtagagacaatgcattacatatgtaaggtt 206  Q
    ||||| ||||||||||||||||||||  |||||||||| | ||||| ||||||    
T  8717541 tcctcgtgagtttagctcagttggtatggacaatgcataatatatgcaaggtt 8717489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 154 - 206
Target Start/End: Complemental strand, 12714436 - 12714384
Alignment:
Q  154 tcctcatgagtttagctcagttggtagagacaatgcattacatatgtaaggtt 206  Q
    ||||| |||||||||||||||||| || |||||||||| | ||||| ||||||    
T  12714436 tcctcgtgagtttagctcagttggaagggacaatgcataatatatgcaaggtt 12714384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 191
Target Start/End: Complemental strand, 20665746 - 20665706
Alignment:
Q  151 ttgtcctcatgagtttagctcagttggtagagacaatgcat 191  Q
    |||||||||||||||||||||||||| |||  |||||||||    
T  20665746 ttgtcctcatgagtttagctcagttgataggaacaatgcat 20665706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 154 - 218
Target Start/End: Complemental strand, 26991823 - 26991759
Alignment:
Q  154 tcctcatgagtttagctcagttggtagagacaatgcattacatatgtaaggtttgaagttcaaac 218  Q
    ||||||||||||| ||||||||| ||  |||||||||| | ||||| ||||||||  ||||||||    
T  26991823 tcctcatgagtttggctcagttgatatggacaatgcataatatatgcaaggtttgtggttcaaac 26991759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 146 - 206
Target Start/End: Original strand, 32555241 - 32555301
Alignment:
Q  146 ttatgttgtcctcatgagtttagctcagttggtagagacaatgcattacatatgtaaggtt 206  Q
    |||| |||||||| ||||||||||| ||||||||  |||||||||| | ||||| ||||||    
T  32555241 ttatcttgtcctcgtgagtttagcttagttggtatggacaatgcataaaatatgcaaggtt 32555301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 37; Significance: 0.000000000006; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 152 - 220
Target Start/End: Original strand, 2105898 - 2105966
Alignment:
Q  152 tgtcctcatgagtttagctcagttggtagagacaatgcattacatatgtaaggtttgaagttcaaactc 220  Q
    ||||||| |||||||||||| ||||||| | ||||||||| | |||||||||||| || ||||||||||    
T  2105898 tgtcctcgtgagtttagctcggttggtaaaaacaatgcataatatatgtaaggttcgaggttcaaactc 2105966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 165 - 221
Target Start/End: Original strand, 4826296 - 4826352
Alignment:
Q  165 ttagctcagttggtagagacaatgcattacatatgtaaggtttgaagttcaaactcc 221  Q
    |||| ||| |||||||||||||||||| | |||||||||||| || |||||||||||    
T  4826296 ttagttcaattggtagagacaatgcataatatatgtaaggttcgaggttcaaactcc 4826352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 152 - 204
Target Start/End: Complemental strand, 28757336 - 28757284
Alignment:
Q  152 tgtcctcatgagtttagctcagttggtagagacaatgcattacatatgtaagg 204  Q
    ||||||| ||||||||||| |||||||| ||||||||||| ||||||| ||||    
T  28757336 tgtcctcgtgagtttagctaagttggtatagacaatgcataacatatgaaagg 28757284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 153 - 208
Target Start/End: Complemental strand, 331953 - 331898
Alignment:
Q  153 gtcctcatgagtttagctcagttggtagagacaatgcattacatatgtaaggtttg 208  Q
    |||||| |||| ||| ||||||||||||||||||||||| | ||||| ||||||||    
T  331953 gtcctcgtgagcttaactcagttggtagagacaatgcataatatatgcaaggtttg 331898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 218
Target Start/End: Complemental strand, 2617253 - 2617207
Alignment:
Q  172 agttggtagagacaatgcattacatatgtaaggtttgaagttcaaac 218  Q
    |||||||||||||||||||| | ||||||||||||||| ||| ||||    
T  2617253 agttggtagagacaatgcataatatatgtaaggtttgaggtttaaac 2617207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 223
Target Start/End: Complemental strand, 21237028 - 21236958
Alignment:
Q  153 gtcctcatgagtttagctcagttggtagagacaatgcattacatatgtaaggtttgaagttcaaactccaa 223  Q
    |||||| |||||||| | |||||||| |||| ||||||| | | ||| |||||||||||||||||| ||||    
T  21237028 gtcctcgtgagtttatcgcagttggttgagaaaatgcataatacatgcaaggtttgaagttcaaaccccaa 21236958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 205
Target Start/End: Complemental strand, 24373779 - 24373725
Alignment:
Q  151 ttgtcctcatgagtttagctcagttggtagagacaatgcattacatatgtaaggt 205  Q
    |||||||| |||||||| |||| |||||||||||||||||| | ||||| |||||    
T  24373779 ttgtcctcgtgagtttaactcaattggtagagacaatgcataatatatgcaaggt 24373725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 160 - 221
Target Start/End: Original strand, 10018401 - 10018461
Alignment:
Q  160 tgagtttagctcagttggtagagacaatgcattacatatgtaaggtttgaagttcaaactcc 221  Q
    ||||||||||||||||||||| || ||||||| | |||||||||||| |  |||||||||||    
T  10018401 tgagtttagctcagttggtag-gataatgcataatatatgtaaggttcggggttcaaactcc 10018461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 205
Target Start/End: Original strand, 11520583 - 11520636
Alignment:
Q  152 tgtcctcatgagtttagctcagttggtagagacaatgcattacatatgtaaggt 205  Q
    ||||||| ||||||||| ||||||||||| |||||||||| | || ||||||||    
T  11520583 tgtcctcgtgagtttagttcagttggtagcgacaatgcataatatttgtaaggt 11520636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 205
Target Start/End: Original strand, 21296751 - 21296804
Alignment:
Q  152 tgtcctcatgagtttagctcagttggtagagacaatgcattacatatgtaaggt 205  Q
    ||||||| ||||||||||||||||||| | |||||||||| | ||||| |||||    
T  21296751 tgtcctcgtgagtttagctcagttggttgggacaatgcataaaatatgcaaggt 21296804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 221
Target Start/End: Original strand, 32053781 - 32053850
Alignment:
Q  152 tgtcctcatgagtttagctcagttggtagagacaatgcattacatatgtaaggtttgaagttcaaactcc 221  Q
    ||||||| |||| |||||||||||||||  |||||||||| | ||||| |||||| |  |||||||||||    
T  32053781 tgtcctcgtgagcttagctcagttggtatggacaatgcataatatatgcaaggttcgtggttcaaactcc 32053850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 191
Target Start/End: Original strand, 247337 - 247377
Alignment:
Q  151 ttgtcctcatgagtttagctcagttggtagagacaatgcat 191  Q
    |||||||||||||||||||||||||| |||  |||||||||    
T  247337 ttgtcctcatgagtttagctcagttgataggaacaatgcat 247377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 154 - 218
Target Start/End: Complemental strand, 1989108 - 1989045
Alignment:
Q  154 tcctcatgagtttagctcagttggtagagacaatgcattacatatgtaaggtttgaagttcaaac 218  Q
    ||||| |||| ||| |||||||||||  |||||||||| | ||||||||||||||| ||||||||    
T  1989108 tcctcgtgagcttaactcagttggtat-gacaatgcataatatatgtaaggtttgaggttcaaac 1989045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 191
Target Start/End: Complemental strand, 11129679 - 11129639
Alignment:
Q  151 ttgtcctcatgagtttagctcagttggtagagacaatgcat 191  Q
    ||||||||||||| ||||||||||||||||  |||||||||    
T  11129679 ttgtcctcatgagcttagctcagttggtaggaacaatgcat 11129639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 153 - 213
Target Start/End: Original strand, 12204363 - 12204423
Alignment:
Q  153 gtcctcatgagtttagctcagttggtagagacaatgcattacatatgtaaggtttgaagtt 213  Q
    |||||| ||||  ||||||||||| ||  |||||||||| | |||||||||||||||||||    
T  12204363 gtcctcgtgagcatagctcagttgatatggacaatgcataatatatgtaaggtttgaagtt 12204423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 153 - 205
Target Start/End: Original strand, 16390423 - 16390475
Alignment:
Q  153 gtcctcatgagtttagctcagttggtagagacaatgcattacatatgtaaggt 205  Q
    |||||| |||| ||| |||||||||||| |||||||||| | |||||||||||    
T  16390423 gtcctcgtgagcttacctcagttggtagggacaatgcataatatatgtaaggt 16390475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 208
Target Start/End: Complemental strand, 16453397 - 16453349
Alignment:
Q  160 tgagtttagctcagttggtagagacaatgcattacatatgtaaggtttg 208  Q
    |||||||| |||||||||||| |||||| ||| | ||||||||||||||    
T  16453397 tgagtttatctcagttggtagggacaatacataatatatgtaaggtttg 16453349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 159 - 219
Target Start/End: Original strand, 29457181 - 29457241
Alignment:
Q  159 atgagtttagctcagttggtagagacaatgcattacatatgtaaggtttgaagttcaaact 219  Q
    ||||||||||||||||||||||  | ||||||| | |||| |||||||||  |||||||||    
T  29457181 atgagtttagctcagttggtaggaaaaatgcataatatatataaggtttgtggttcaaact 29457241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 191
Target Start/End: Original strand, 33975921 - 33975961
Alignment:
Q  151 ttgtcctcatgagtttagctcagttggtagagacaatgcat 191  Q
    |||||||||||||||||||||||||| |||  |||||||||    
T  33975921 ttgtcctcatgagtttagctcagttgataggaacaatgcat 33975961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 191
Target Start/End: Original strand, 34828298 - 34828338
Alignment:
Q  151 ttgtcctcatgagtttagctcagttggtagagacaatgcat 191  Q
    |||||||| ||||||||||||||||||||  ||||||||||    
T  34828298 ttgtcctcgtgagtttagctcagttggtatggacaatgcat 34828338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 35; Significance: 0.0000000001; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 153 - 227
Target Start/End: Original strand, 41520948 - 41521022
Alignment:
Q  153 gtcctcatgagtttagctcagttggtagagacaatgcattacatatgtaaggtttgaagttcaaactccaaccac 227  Q
    |||||||| || ||| ||||||||||||||||||||||| | ||||| ||||||  | ||||||||||| |||||    
T  41520948 gtcctcataagcttaactcagttggtagagacaatgcataatatatgcaaggttcaaggttcaaactccgaccac 41521022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 153 - 218
Target Start/End: Original strand, 13121538 - 13121603
Alignment:
Q  153 gtcctcatgagtttagctcagttggtagagacaatgcattacatatgtaaggtttgaagttcaaac 218  Q
    |||||| |||| |||||| ||||||||| |||||||||| | ||||| ||||| ||||||||||||    
T  13121538 gtcctcgtgagcttagcttagttggtagggacaatgcataatatatgcaaggtctgaagttcaaac 13121603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 160 - 205
Target Start/End: Original strand, 54500570 - 54500615
Alignment:
Q  160 tgagtttagctcagttggtagagacaatgcattacatatgtaaggt 205  Q
    |||| ||||||||||||||||||||||||||| | |||||||||||    
T  54500570 tgagcttagctcagttggtagagacaatgcataatatatgtaaggt 54500615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 151 - 191
Target Start/End: Complemental strand, 12671817 - 12671777
Alignment:
Q  151 ttgtcctcatgagtttagctcagttggtagagacaatgcat 191  Q
    |||||||| |||||||||||||||||||| |||||||||||    
T  12671817 ttgtcctcgtgagtttagctcagttggtatagacaatgcat 12671777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 141 - 209
Target Start/End: Original strand, 21465593 - 21465661
Alignment:
Q  141 aattattatgttgtcctcatgagtttagctcagttggtagagacaatgcattacatatgtaaggtttga 209  Q
    |||| |||| |||||||| |||||||| ||||||| |||  |||||||||| | |||||||||||||||    
T  21465593 aatttttattttgtcctcgtgagtttaactcagttagtaaggacaatgcataatatatgtaaggtttga 21465661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 151 - 227
Target Start/End: Complemental strand, 29731448 - 29731372
Alignment:
Q  151 ttgtcctcatgagtttagctcagttggtagagacaatgcattacatatgtaaggtttgaagttcaaactccaaccac 227  Q
    ||||| || ||||||||||||||||||| | | |||||||| | |||||||| |||||  ||||||| |||||||||    
T  29731448 ttgtcatcgtgagtttagctcagttggttggggcaatgcataaaatatgtaatgtttggggttcaaattccaaccac 29731372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 151 - 218
Target Start/End: Complemental strand, 11286850 - 11286783
Alignment:
Q  151 ttgtcctcatgagtttagctcagttggtagagacaatgcattacatatgtaaggtttgaagttcaaac 218  Q
    |||||||| |||| |||| |||||||||||||||||||||| | ||||| ||||| |||  |||||||    
T  11286850 ttgtcctcctgagcttagttcagttggtagagacaatgcataatatatgcaaggtctgagattcaaac 11286783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 152 - 227
Target Start/End: Complemental strand, 22164337 - 22164262
Alignment:
Q  152 tgtcctcatgagtttagctcagttggtagagacaatgcattacatatgtaaggtttgaagttcaaactccaaccac 227  Q
    ||||||| ||||||||||| |||||||||  ||||||||| | ||||||||||| ||  |||||||| || |||||    
T  22164337 tgtcctcgtgagtttagcttagttggtaggaacaatgcataatatatgtaaggtctggggttcaaaccccgaccac 22164262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 145 - 220
Target Start/End: Original strand, 22411750 - 22411825
Alignment:
Q  145 attatgttgtcctcatgagtttagctcagttggtagagacaatgcattacatatgtaaggtttgaagttcaaactc 220  Q
    |||||||  ||||||||||  ||||||||||||||  |||||||||| | |||||||||||| |  ||||||||||    
T  22411750 attatgtcctcctcatgagcatagctcagttggtatggacaatgcataatatatgtaaggttcggggttcaaactc 22411825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 152 - 227
Target Start/End: Complemental strand, 22630428 - 22630353
Alignment:
Q  152 tgtcctcatgagtttagctcagttggtagagacaatgcattacatatgtaaggtttgaagttcaaactccaaccac 227  Q
    ||||||| |||| ||| |||||||||||| |||||||||| | ||||| ||||| ||| |||||||| || |||||    
T  22630428 tgtcctcgtgagattatctcagttggtagtgacaatgcataatatatgcaaggtctgaggttcaaaccccgaccac 22630353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 154 - 221
Target Start/End: Original strand, 32006495 - 32006562
Alignment:
Q  154 tcctcatgagtttagctcagttggtagagacaatgcattacatatgtaaggtttgaagttcaaactcc 221  Q
    ||||| ||||||||||||||||||||| || ||||||| | |||||||| ||| |  |||||||||||    
T  32006495 tcctcgtgagtttagctcagttggtagggataatgcataatatatgtaaagttcggggttcaaactcc 32006562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 151 - 206
Target Start/End: Original strand, 36478983 - 36479038
Alignment:
Q  151 ttgtcctcatgagtttagctcagttggtagagacaatgcattacatatgtaaggtt 206  Q
    ||||||||||||| ||||||| |||||||  |||||||||| | ||||||||||||    
T  36478983 ttgtcctcatgagcttagctctgttggtatggacaatgcataatatatgtaaggtt 36479038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 166 - 221
Target Start/End: Complemental strand, 46434814 - 46434759
Alignment:
Q  166 tagctcagttggtagagacaatgcattacatatgtaaggtttgaagttcaaactcc 221  Q
    ||||||||||| ||  |||||||||| | ||||||||||||||| |||||||||||    
T  46434814 tagctcagttgataaggacaatgcataatatatgtaaggtttgaggttcaaactcc 46434759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 218
Target Start/End: Complemental strand, 10564525 - 10564467
Alignment:
Q  160 tgagtttagctcagttggtagagacaatgcattacatatgtaaggtttgaagttcaaac 218  Q
    ||||||||||||||||||||  |||||| ||| | ||||||||||| ||| ||||||||    
T  10564525 tgagtttagctcagttggtatggacaatacataatatatgtaaggtctgaggttcaaac 10564467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 220
Target Start/End: Original strand, 23160047 - 23160101
Alignment:
Q  166 tagctcagttggtagagacaatgcattacatatgtaaggtttgaagttcaaactc 220  Q
    ||||||||||||||| |||||||||| | |||||||||||  || ||||||||||    
T  23160047 tagctcagttggtagggacaatgcataatatatgtaaggtccgaggttcaaactc 23160101  T

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Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 227
Target Start/End: Original strand, 25999403 - 25999465
Alignment:
Q  165 ttagctcagttggtagagacaatgcattacatatgtaaggtttgaagttcaaactccaaccac 227  Q
    |||||||||||||||| |||||||||| | |||| |||||||   |||||||||||| |||||    
T  25999403 ttagctcagttggtagggacaatgcataatatatataaggttccgagttcaaactccgaccac 25999465  T

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Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 207
Target Start/End: Complemental strand, 34942478 - 34942424
Alignment:
Q  153 gtcctcatgagtttagctcagttggtagagacaatgcattacatatgtaaggttt 207  Q
    |||| |||||| |||| ||||||||||||||||||| || | |||||||||||||    
T  34942478 gtccccatgagcttagttcagttggtagagacaatgtataatatatgtaaggttt 34942424  T

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Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 227
Target Start/End: Original strand, 48171871 - 48171949
Alignment:
Q  149 tgttgtcctcatgagtttagctcagttggtagagacaatgcattacatatgtaaggtttgaagttcaaactccaaccac 227  Q
    ||||||||| ||||| ||| |||||||||||||||||||| || | ||||| ||||||  | |||||||| || |||||    
T  48171871 tgttgtccttatgagcttaactcagttggtagagacaatgtataatatatgcaaggttctaggttcaaaccccgaccac 48171949  T

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Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 214
Target Start/End: Original strand, 51002280 - 51002342
Alignment:
Q  152 tgtcctcatgagtttagctcagttggtagagacaatgcattacatatgtaaggtttgaagttc 214  Q
    ||||||| |||| ||| ||||||||||| ||||||||||| | ||||| ||||||||| ||||    
T  51002280 tgtcctcgtgagcttaactcagttggtatagacaatgcataaaatatgcaaggtttgaggttc 51002342  T

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Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 148 - 205
Target Start/End: Original strand, 7230269 - 7230326
Alignment:
Q  148 atgttgtcctcatgagtttagctcagttggtagagacaatgcattacatatgtaaggt 205  Q
    ||||||||||| |||| |||||||||||||||  |||||||||| | ||||| |||||    
T  7230269 atgttgtcctcgtgagcttagctcagttggtaaggacaatgcataatatatgcaaggt 7230326  T

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Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 205
Target Start/End: Complemental strand, 11949831 - 11949778
Alignment:
Q  152 tgtcctcatgagtttagctcagttggtagagacaatgcattacatatgtaaggt 205  Q
    |||||||||||| |||||||||||||||  |||||||||| | ||||| |||||    
T  11949831 tgtcctcatgagcttagctcagttggtatggacaatgcataatatatgcaaggt 11949778  T

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Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 160 - 205
Target Start/End: Complemental strand, 21317398 - 21317353
Alignment:
Q  160 tgagtttagctcagttggtagagacaatgcattacatatgtaaggt 205  Q
    |||| ||||||||||||||||||||||||||| | ||||| |||||    
T  21317398 tgagcttagctcagttggtagagacaatgcataatatatgcaaggt 21317353  T

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Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 205
Target Start/End: Original strand, 21935005 - 21935058
Alignment:
Q  152 tgtcctcatgagtttagctcagttggtagagacaatgcattacatatgtaaggt 205  Q
    ||||||| |||||||| ||||||||||| ||||||||||| |  ||||||||||    
T  21935005 tgtcctcgtgagtttaactcagttggtatagacaatgcataatgtatgtaaggt 21935058  T

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Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 154 - 191
Target Start/End: Complemental strand, 29346374 - 29346337
Alignment:
Q  154 tcctcatgagtttagctcagttggtagagacaatgcat 191  Q
    |||||||||| |||||||||||| ||||||||||||||    
T  29346374 tcctcatgagcttagctcagttgatagagacaatgcat 29346337  T

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Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 172 - 221
Target Start/End: Complemental strand, 38767082 - 38767033
Alignment:
Q  172 agttggtagagacaatgcattacatatgtaaggtttgaagttcaaactcc 221  Q
    |||||||||  ||||||||| ||||||||||||||||  |||||||||||    
T  38767082 agttggtaggaacaatgcataacatatgtaaggtttggggttcaaactcc 38767033  T

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Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 205
Target Start/End: Original strand, 43722758 - 43722811
Alignment:
Q  152 tgtcctcatgagtttagctcagttggtagagacaatgcattacatatgtaaggt 205  Q
    ||||||| |||||||| |||||||||||  |||||||||| | |||||||||||    
T  43722758 tgtcctcgtgagtttaactcagttggtatggacaatgcataatatatgtaaggt 43722811  T

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Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 205
Target Start/End: Complemental strand, 50362207 - 50362154
Alignment:
Q  152 tgtcctcatgagtttagctcagttggtagagacaatgcattacatatgtaaggt 205  Q
    ||||||| |||| |||||||||||||||| |||||||||| | ||||| |||||    
T  50362207 tgtcctcgtgagcttagctcagttggtagggacaatgcataatatatgcaaggt 50362154  T

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Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 160 - 225
Target Start/End: Original strand, 52936642 - 52936707
Alignment:
Q  160 tgagtttagctcagttggtagagacaatgcattacatatgtaaggtttgaagttcaaactccaacc 225  Q
    |||| ||| |||||||| |||| |||||| || | ||||||||||||||| |||||||||| ||||    
T  52936642 tgagcttaactcagttgatagaaacaatgtataatatatgtaaggtttgaggttcaaactcaaacc 52936707  T

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Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 205
Target Start/End: Original strand, 897423 - 897471
Alignment:
Q  157 tcatgagtttagctcagttggtagagacaatgcattacatatgtaaggt 205  Q
    |||||||||||||||||||||||  ||||||| || | |||||||||||    
T  897423 tcatgagtttagctcagttggtatggacaatgtataatatatgtaaggt 897471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 170 - 218
Target Start/End: Complemental strand, 7739260 - 7739212
Alignment:
Q  170 tcagttggtagagacaatgcattacatatgtaaggtttgaagttcaaac 218  Q
    ||||||||| |||||||||||| | ||||||||||| ||| ||||||||    
T  7739260 tcagttggttgagacaatgcatcaaatatgtaaggtctgaggttcaaac 7739212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 191
Target Start/End: Complemental strand, 10262152 - 10262112
Alignment:
Q  151 ttgtcctcatgagtttagctcagttggtagagacaatgcat 191  Q
    |||||||||||||||||||||||||| |||  |||||||||    
T  10262152 ttgtcctcatgagtttagctcagttgataggaacaatgcat 10262112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 227
Target Start/End: Complemental strand, 17423246 - 17423170
Alignment:
Q  151 ttgtcctcatgagtttagctcagttggtagagacaatgcattacatatgtaaggtttgaagttcaaactccaaccac 227  Q
    |||||||  |||| ||| ||||||||||||||||||||||| | ||||| |||||  |  |||||||||||| ||||    
T  17423246 ttgtccttctgaggttaactcagttggtagagacaatgcataatatatgcaaggtccggggttcaaactccagccac 17423170  T

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Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 191
Target Start/End: Original strand, 19587831 - 19587871
Alignment:
Q  151 ttgtcctcatgagtttagctcagttggtagagacaatgcat 191  Q
    |||||||||||||||||||||||||| |||  |||||||||    
T  19587831 ttgtcctcatgagtttagctcagttgataggaacaatgcat 19587871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 153 - 205
Target Start/End: Complemental strand, 20799461 - 20799409
Alignment:
Q  153 gtcctcatgagtttagctcagttggtagagacaatgcattacatatgtaaggt 205  Q
    |||||| |||| |||||||||||||||| |||||||||| | ||||| |||||    
T  20799461 gtcctcgtgagcttagctcagttggtagggacaatgcataatatatgcaaggt 20799409  T

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Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 191
Target Start/End: Original strand, 21562303 - 21562343
Alignment:
Q  151 ttgtcctcatgagtttagctcagttggtagagacaatgcat 191  Q
    |||||||||||||||||||||||||| |||  |||||||||    
T  21562303 ttgtcctcatgagtttagctcagttgataggaacaatgcat 21562343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 191
Target Start/End: Complemental strand, 24080223 - 24080183
Alignment:
Q  151 ttgtcctcatgagtttagctcagttggtagagacaatgcat 191  Q
    |||||||||||||||||||||||||| |||  |||||||||    
T  24080223 ttgtcctcatgagtttagctcagttgataggaacaatgcat 24080183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 191
Target Start/End: Original strand, 43329824 - 43329864
Alignment:
Q  151 ttgtcctcatgagtttagctcagttggtagagacaatgcat 191  Q
    |||||||||||||||||||||||||| |||  |||||||||    
T  43329824 ttgtcctcatgagtttagctcagttgataggaacaatgcat 43329864  T

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Target: scaffold0334 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 160 - 227
Target Start/End: Original strand, 5183 - 5250
Alignment:
Q  160 tgagtttagctcagttggtagagacaatgcattacatatgtaaggtttgaagttcaaactccaaccac 227  Q
    ||||||||||||| ||||||  |||||||||| | ||||| ||||| ||| |||||||| ||||||||    
T  5183 tgagtttagctcaattggtatggacaatgcataatatatgcaaggtctgaggttcaaaccccaaccac 5250  T

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Target: scaffold0154 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 151 - 208
Target Start/End: Complemental strand, 10826 - 10769
Alignment:
Q  151 ttgtcctcatgagtttagctcagttggtagagacaatgcattacatatgtaaggtttg 208  Q
    |||||| | ||||||||||||||||||||  |||||||||| | ||||| ||||||||    
T  10826 ttgtccccgtgagtttagctcagttggtaaggacaatgcataaaatatgcaaggtttg 10769  T

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Target: scaffold0045 (Bit Score: 30; Significance: 0.00000009; HSPs: 2)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 153 - 218
Target Start/End: Original strand, 63856 - 63921
Alignment:
Q  153 gtcctcatgagtttagctcagttggtagagacaatgcattacatatgtaaggtttgaagttcaaac 218  Q
    |||||| ||||||||||||||||||||| ||||||| || | ||||  || |||||| ||||||||    
T  63856 gtcctcgtgagtttagctcagttggtagggacaatgtataatatatacaaagtttgaggttcaaac 63921  T

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Target: scaffold0045; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 153 - 218
Target Start/End: Original strand, 71188 - 71253
Alignment:
Q  153 gtcctcatgagtttagctcagttggtagagacaatgcattacatatgtaaggtttgaagttcaaac 218  Q
    |||||| ||||||||||||||||||||| ||||||| || | ||||  || |||||| ||||||||    
T  71188 gtcctcgtgagtttagctcagttggtagggacaatgtataatatatacaaagtttgaggttcaaac 71253  T

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Target: scaffold0350 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0350
Description:

Target: scaffold0350; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 221
Target Start/End: Original strand, 1254 - 1310
Alignment:
Q  165 ttagctcagttggtagagacaatgcattacatatgtaaggtttgaagttcaaactcc 221  Q
    |||||||||||| ||  |||||||||| | ||||||||||| || ||||||||||||    
T  1254 ttagctcagttgatatggacaatgcataatatatgtaaggtctggagttcaaactcc 1310  T

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Target: scaffold0188 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 153 - 205
Target Start/End: Complemental strand, 28180 - 28128
Alignment:
Q  153 gtcctcatgagtttagctcagttggtagagacaatgcattacatatgtaaggt 205  Q
    |||||| ||||||||||||||||||||  |||||||||| || |||| |||||    
T  28180 gtcctcgtgagtttagctcagttggtatggacaatgcataacgtatgcaaggt 28128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 205
Target Start/End: Original strand, 35176 - 35224
Alignment:
Q  157 tcatgagtttagctcagttggtagagacaatgcattacatatgtaaggt 205  Q
    ||||||| ||||||||||| ||| ||||||||||| | |||||||||||    
T  35176 tcatgagcttagctcagttagtatagacaatgcataatatatgtaaggt 35224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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