View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16131_low_8 (Length: 439)

Name: NF16131_low_8
Description: NF16131
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16131_low_8
NF16131_low_8
[»] chr3 (86 HSPs)
chr3 (10-422)||(10464727-10465139)
chr3 (230-358)||(24095336-24095474)
chr3 (230-358)||(55400002-55400140)
chr3 (230-358)||(20080076-20080213)
chr3 (255-357)||(46019491-46019602)
chr3 (261-351)||(49761342-49761441)
chr3 (230-358)||(37927135-37927273)
chr3 (230-358)||(39697152-39697290)
chr3 (253-352)||(51343435-51343543)
chr3 (293-361)||(52937259-52937327)
chr3 (261-358)||(3281646-3281752)
chr3 (293-358)||(24645432-24645497)
chr3 (224-358)||(46253619-46253763)
chr3 (230-351)||(8846494-8846625)
chr3 (293-351)||(24480388-24480446)
chr3 (293-358)||(51465844-51465909)
chr3 (230-360)||(42683830-42683970)
chr3 (230-351)||(21196127-21196258)
chr3 (225-358)||(34057883-34058026)
chr3 (301-363)||(6999254-6999316)
chr3 (301-363)||(36412207-36412269)
chr3 (230-358)||(44677414-44677552)
chr3 (230-358)||(50206900-50207038)
chr3 (254-358)||(50638281-50638392)
chr3 (253-361)||(3953402-3953519)
chr3 (293-358)||(26672474-26672539)
chr3 (293-358)||(54694043-54694108)
chr3 (301-357)||(41281652-41281708)
chr3 (261-363)||(1337768-1337875)
chr3 (268-351)||(3347064-3347151)
chr3 (254-292)||(6178431-6178469)
chr3 (230-358)||(24482893-24483031)
chr3 (301-351)||(26645110-26645160)
chr3 (256-349)||(29573295-29573397)
chr3 (230-358)||(31376696-31376833)
chr3 (294-364)||(37410952-37411022)
chr3 (254-292)||(42358644-42358682)
chr3 (230-358)||(43904976-43905114)
chr3 (230-351)||(46852069-46852199)
chr3 (256-289)||(40367638-40367671)
chr3 (294-351)||(46094488-46094545)
chr3 (228-292)||(49167751-49167816)
chr3 (230-290)||(20547998-20548058)
chr3 (228-292)||(41505492-41505556)
chr3 (256-292)||(45711445-45711481)
chr3 (253-292)||(10811162-10811201)
chr3 (225-292)||(26014810-26014877)
chr3 (230-292)||(26996319-26996382)
chr3 (225-287)||(30863086-30863149)
chr3 (225-292)||(38671616-38671683)
chr3 (253-292)||(49417602-49417641)
chr3 (230-292)||(5244232-5244294)
chr3 (230-292)||(7668193-7668255)
chr3 (221-345)||(22371185-22371319)
chr3 (230-292)||(27541508-27541570)
chr3 (230-292)||(35597165-35597227)
chr3 (230-292)||(36671020-36671082)
chr3 (230-358)||(37508428-37508566)
chr3 (254-292)||(41443196-41443234)
chr3 (262-292)||(49196731-49196761)
chr3 (254-292)||(50559217-50559255)
chr3 (321-363)||(55282615-55282657)
chr3 (256-289)||(33796296-33796329)
chr3 (293-358)||(36121897-36121962)
chr3 (294-358)||(1280059-1280123)
chr3 (256-292)||(7934004-7934040)
chr3 (256-292)||(14207263-14207299)
chr3 (256-292)||(14215011-14215047)
chr3 (256-292)||(16479661-16479697)
chr3 (293-349)||(16675465-16675521)
chr3 (256-292)||(27718791-27718827)
chr3 (256-292)||(29917029-29917065)
chr3 (256-292)||(29966182-29966218)
chr3 (256-288)||(31931028-31931060)
chr3 (256-288)||(33389038-33389070)
chr3 (253-293)||(33795728-33795768)
chr3 (261-293)||(37780347-37780379)
chr3 (256-292)||(37894248-37894284)
chr3 (257-285)||(43143547-43143575)
chr3 (256-292)||(43720411-43720447)
chr3 (256-292)||(44413926-44413962)
chr3 (256-292)||(44813163-44813199)
chr3 (256-292)||(45186557-45186593)
chr3 (256-292)||(45293034-45293070)
chr3 (293-349)||(45754714-45754770)
chr3 (256-292)||(46815864-46815900)
[»] chr6 (39 HSPs)
chr6 (230-358)||(2688995-2689132)
chr6 (230-358)||(32459446-32459585)
chr6 (230-358)||(18141231-18141369)
chr6 (230-358)||(20822799-20822936)
chr6 (254-351)||(35213498-35213604)
chr6 (230-357)||(754369-754506)
chr6 (293-358)||(14699594-14699659)
chr6 (293-361)||(1369436-1369504)
chr6 (232-358)||(13143312-13143448)
chr6 (230-349)||(24842371-24842499)
chr6 (293-363)||(14693177-14693247)
chr6 (261-363)||(5028191-5028302)
chr6 (293-351)||(868889-868947)
chr6 (230-292)||(5570339-5570401)
chr6 (293-355)||(8747245-8747307)
chr6 (230-358)||(33421763-33421900)
chr6 (226-332)||(5522595-5522710)
chr6 (225-358)||(23628358-23628502)
chr6 (230-292)||(2242027-2242090)
chr6 (230-351)||(11547466-11547597)
chr6 (293-360)||(31749441-31749508)
chr6 (253-292)||(34442068-34442107)
chr6 (304-358)||(6531110-6531164)
chr6 (227-292)||(30152535-30152601)
chr6 (256-292)||(13422998-13423034)
chr6 (224-292)||(25811844-25811912)
chr6 (225-347)||(34047385-34047516)
chr6 (230-292)||(3198963-3199026)
chr6 (254-292)||(8645336-8645374)
chr6 (256-290)||(14817961-14817995)
chr6 (258-292)||(28630130-28630164)
chr6 (301-351)||(28944916-28944966)
chr6 (293-363)||(32046774-32046844)
chr6 (224-292)||(11635540-11635609)
chr6 (256-289)||(33635909-33635942)
chr6 (306-358)||(15318118-15318170)
chr6 (258-290)||(17182131-17182163)
chr6 (256-284)||(25142564-25142592)
chr6 (293-357)||(28041745-28041809)
[»] chr5 (56 HSPs)
chr5 (230-358)||(19839916-19840054)
chr5 (227-368)||(9581579-9581730)
chr5 (294-357)||(18397096-18397159)
chr5 (230-359)||(34124624-34124763)
chr5 (230-358)||(19481112-19481250)
chr5 (256-357)||(43213990-43214100)
chr5 (293-359)||(43441814-43441880)
chr5 (261-363)||(1839270-1839381)
chr5 (224-340)||(6517709-6517835)
chr5 (230-358)||(10649438-10649576)
chr5 (215-292)||(32912026-32912104)
chr5 (262-361)||(34270363-34270471)
chr5 (230-351)||(189640-189771)
chr5 (268-358)||(8675363-8675462)
chr5 (261-363)||(41175631-41175742)
chr5 (293-363)||(15952970-15953040)
chr5 (254-351)||(20770159-20770265)
chr5 (294-358)||(4771574-4771638)
chr5 (255-357)||(6446449-6446560)
chr5 (230-292)||(22649667-22649729)
chr5 (293-358)||(30640866-30640931)
chr5 (254-358)||(43196555-43196668)
chr5 (258-349)||(6940089-6940189)
chr5 (230-290)||(18660762-18660822)
chr5 (302-358)||(38704127-38704183)
chr5 (230-289)||(7076577-7076636)
chr5 (266-358)||(9226341-9226441)
chr5 (256-349)||(9939371-9939473)
chr5 (256-349)||(18695348-18695450)
chr5 (230-358)||(18842251-18842389)
chr5 (258-292)||(34379485-34379519)
chr5 (294-356)||(43154137-43154199)
chr5 (293-350)||(10659042-10659098)
chr5 (224-292)||(21064231-21064300)
chr5 (230-293)||(8920081-8920145)
chr5 (293-357)||(15478734-15478798)
chr5 (253-293)||(38363108-38363148)
chr5 (225-292)||(1764222-1764289)
chr5 (261-363)||(3640122-3640233)
chr5 (230-292)||(8267825-8267888)
chr5 (254-292)||(611892-611930)
chr5 (230-292)||(1079958-1080020)
chr5 (230-358)||(6292124-6292262)
chr5 (258-292)||(11954463-11954497)
chr5 (258-292)||(14532536-14532570)
chr5 (258-292)||(40829446-40829480)
chr5 (301-351)||(41724273-41724323)
chr5 (293-358)||(2688916-2688981)
chr5 (294-351)||(15008487-15008544)
chr5 (227-292)||(19522009-19522074)
chr5 (312-357)||(30004722-30004767)
chr5 (256-292)||(6758796-6758832)
chr5 (256-292)||(9168170-9168206)
chr5 (256-292)||(22098285-22098321)
chr5 (256-292)||(38293364-38293400)
chr5 (256-292)||(41321284-41321320)
[»] chr7 (71 HSPs)
chr7 (230-358)||(31844535-31844672)
chr7 (230-359)||(3343259-3343398)
chr7 (255-357)||(44184490-44184601)
chr7 (254-363)||(10055557-10055675)
chr7 (261-358)||(3062365-3062471)
chr7 (226-358)||(43482523-43482664)
chr7 (293-361)||(43573470-43573538)
chr7 (230-363)||(33180635-33180778)
chr7 (261-363)||(7817672-7817782)
chr7 (293-358)||(13729802-13729867)
chr7 (293-358)||(28036820-28036885)
chr7 (293-361)||(35588818-35588886)
chr7 (261-358)||(11352904-11353010)
chr7 (230-358)||(21559801-21559939)
chr7 (256-349)||(46829509-46829611)
chr7 (293-358)||(3293205-3293270)
chr7 (293-358)||(20482603-20482668)
chr7 (258-358)||(35452503-35452612)
chr7 (230-358)||(34757401-34757536)
chr7 (293-351)||(34855521-34855580)
chr7 (253-358)||(41458623-41458737)
chr7 (230-358)||(41893918-41894056)
chr7 (293-358)||(11564969-11565033)
chr7 (230-361)||(16980300-16980440)
chr7 (258-348)||(18111551-18111651)
chr7 (254-358)||(32815196-32815309)
chr7 (224-292)||(34978293-34978362)
chr7 (293-358)||(41399093-41399158)
chr7 (293-361)||(12645837-12645905)
chr7 (293-357)||(21822530-21822594)
chr7 (230-289)||(46773650-46773710)
chr7 (230-292)||(13152596-13152658)
chr7 (230-358)||(19786009-19786147)
chr7 (293-351)||(25067299-25067357)
chr7 (293-363)||(42926215-42926285)
chr7 (293-351)||(46812842-46812900)
chr7 (301-358)||(44304007-44304064)
chr7 (256-292)||(6269396-6269432)
chr7 (294-358)||(16708237-16708301)
chr7 (294-358)||(17682473-17682537)
chr7 (256-292)||(34108860-34108896)
chr7 (230-293)||(35586777-35586841)
chr7 (230-293)||(37899217-37899281)
chr7 (224-358)||(39331982-39332126)
chr7 (256-292)||(40854660-40854696)
chr7 (256-292)||(44496808-44496844)
chr7 (254-285)||(30061309-30061340)
chr7 (230-292)||(37808769-37808832)
chr7 (293-352)||(47495046-47495105)
chr7 (256-349)||(1471230-1471332)
chr7 (293-363)||(4713649-4713719)
chr7 (254-292)||(12007191-12007229)
chr7 (258-292)||(24532948-24532982)
chr7 (258-292)||(29723932-29723966)
chr7 (230-292)||(30941389-30941451)
chr7 (254-292)||(31675061-31675099)
chr7 (267-358)||(36019458-36019557)
chr7 (293-359)||(37666769-37666835)
chr7 (254-292)||(43807818-43807856)
chr7 (258-292)||(47145078-47145112)
chr7 (254-292)||(47448854-47448892)
chr7 (293-358)||(8920597-8920662)
chr7 (293-358)||(13162995-13163060)
chr7 (256-293)||(21204359-21204396)
chr7 (301-358)||(40623837-40623894)
chr7 (256-292)||(5174557-5174593)
chr7 (258-286)||(8904418-8904446)
chr7 (301-357)||(23048331-23048386)
chr7 (261-293)||(33224858-33224890)
chr7 (256-292)||(42584832-42584868)
chr7 (295-351)||(47500686-47500742)
[»] chr8 (71 HSPs)
chr8 (255-357)||(41159820-41159931)
chr8 (230-361)||(31596951-31597092)
chr8 (230-358)||(9208069-9208205)
chr8 (227-359)||(9549128-9549270)
chr8 (254-358)||(6991738-6991851)
chr8 (261-363)||(30439431-30439542)
chr8 (230-351)||(41600312-41600441)
chr8 (230-358)||(45529176-45529314)
chr8 (225-358)||(34718113-34718256)
chr8 (293-363)||(23793015-23793085)
chr8 (294-351)||(29028898-29028955)
chr8 (254-358)||(34018836-34018949)
chr8 (294-363)||(41541934-41542003)
chr8 (220-358)||(1633820-1633968)
chr8 (230-340)||(4658211-4658331)
chr8 (230-351)||(5864206-5864327)
chr8 (230-358)||(12783769-12783906)
chr8 (255-357)||(16327082-16327194)
chr8 (261-351)||(7472964-7473062)
chr8 (293-351)||(16613710-16613768)
chr8 (293-355)||(35031430-35031492)
chr8 (293-351)||(39543460-39543518)
chr8 (230-347)||(8645168-8645294)
chr8 (293-358)||(16872086-16872151)
chr8 (293-358)||(36424532-36424597)
chr8 (227-292)||(44825443-44825508)
chr8 (230-363)||(12707152-12707296)
chr8 (230-358)||(16966788-16966926)
chr8 (230-358)||(29991415-29991552)
chr8 (293-363)||(36885413-36885483)
chr8 (261-351)||(2733023-2733121)
chr8 (294-351)||(5277641-5277698)
chr8 (256-293)||(18651400-18651437)
chr8 (301-358)||(20174768-20174825)
chr8 (301-358)||(20219495-20219552)
chr8 (230-293)||(3946243-3946307)
chr8 (294-358)||(7375709-7375772)
chr8 (253-289)||(12735020-12735056)
chr8 (230-331)||(22719443-22719554)
chr8 (230-292)||(11017808-11017871)
chr8 (293-363)||(36568034-36568107)
chr8 (254-292)||(5600992-5601030)
chr8 (254-292)||(5639590-5639628)
chr8 (262-292)||(7678767-7678797)
chr8 (293-351)||(8497606-8497664)
chr8 (230-292)||(10692442-10692504)
chr8 (293-363)||(14707268-14707338)
chr8 (230-292)||(27325761-27325823)
chr8 (293-351)||(28646748-28646806)
chr8 (293-351)||(28651332-28651390)
chr8 (258-292)||(28756567-28756601)
chr8 (230-292)||(31249530-31249592)
chr8 (230-292)||(32501202-32501264)
chr8 (254-292)||(33451568-33451606)
chr8 (254-292)||(34435742-34435780)
chr8 (230-358)||(36110141-36110279)
chr8 (301-359)||(37597322-37597380)
chr8 (293-363)||(38708220-38708290)
chr8 (254-292)||(39359764-39359801)
chr8 (294-358)||(888186-888251)
chr8 (293-358)||(32843872-32843937)
chr8 (230-290)||(36426027-36426088)
chr8 (256-292)||(6440111-6440147)
chr8 (256-292)||(7777185-7777221)
chr8 (256-292)||(9738699-9738734)
chr8 (256-292)||(25830251-25830287)
chr8 (256-292)||(33100474-33100510)
chr8 (256-292)||(35067190-35067226)
chr8 (221-292)||(41520962-41521034)
chr8 (256-292)||(42786665-42786701)
chr8 (293-360)||(43397648-43397716)
[»] chr2 (84 HSPs)
chr2 (230-358)||(6998998-6999136)
chr2 (261-351)||(10711759-10711858)
chr2 (230-351)||(15269864-15269995)
chr2 (229-358)||(32869828-32869967)
chr2 (255-351)||(25881573-25881678)
chr2 (293-358)||(29712054-29712119)
chr2 (230-351)||(7648395-7648523)
chr2 (255-350)||(28245757-28245860)
chr2 (261-363)||(5054643-5054754)
chr2 (253-358)||(6170657-6170771)
chr2 (254-364)||(6895923-6896041)
chr2 (230-357)||(9634367-9634504)
chr2 (293-357)||(7574511-7574575)
chr2 (230-359)||(14233647-14233787)
chr2 (261-363)||(23352832-23352941)
chr2 (230-358)||(37105644-37105779)
chr2 (258-358)||(18876851-18876961)
chr2 (261-363)||(40936989-40937100)
chr2 (265-358)||(42678788-42678891)
chr2 (254-351)||(2221021-2221127)
chr2 (293-351)||(9377532-9377590)
chr2 (230-358)||(18723597-18723735)
chr2 (218-361)||(22525923-22526073)
chr2 (254-351)||(29361048-29361154)
chr2 (230-358)||(35589317-35589455)
chr2 (230-358)||(4061892-4062027)
chr2 (293-358)||(20911877-20911942)
chr2 (293-358)||(44711919-44711984)
chr2 (230-351)||(2563707-2563838)
chr2 (230-358)||(13765403-13765541)
chr2 (230-292)||(22888827-22888889)
chr2 (230-358)||(36802899-36803037)
chr2 (230-292)||(41195587-41195649)
chr2 (293-358)||(28244171-28244235)
chr2 (230-293)||(433853-433917)
chr2 (310-357)||(11167449-11167497)
chr2 (253-293)||(11385018-11385058)
chr2 (230-338)||(30546320-30546437)
chr2 (253-358)||(1415968-1416083)
chr2 (230-358)||(13347744-13347883)
chr2 (305-363)||(1836101-1836159)
chr2 (293-351)||(4299260-4299318)
chr2 (230-292)||(9207593-9207655)
chr2 (294-368)||(12498557-12498630)
chr2 (256-293)||(4384084-4384121)
chr2 (228-293)||(8848700-8848765)
chr2 (294-351)||(12889769-12889826)
chr2 (253-360)||(26206874-26206991)
chr2 (293-358)||(39213700-39213765)
chr2 (253-293)||(14255329-14255369)
chr2 (294-358)||(24562947-24563011)
chr2 (293-357)||(39449343-39449407)
chr2 (254-289)||(7502436-7502471)
chr2 (253-292)||(38821393-38821432)
chr2 (261-292)||(42607536-42607567)
chr2 (261-351)||(42866785-42866884)
chr2 (230-288)||(44254602-44254661)
chr2 (301-363)||(4023275-4023337)
chr2 (230-285)||(7552557-7552614)
chr2 (254-292)||(8427580-8427618)
chr2 (301-351)||(16677754-16677804)
chr2 (230-292)||(18254215-18254277)
chr2 (258-292)||(21738621-21738655)
chr2 (254-292)||(31922298-31922336)
chr2 (230-292)||(34945096-34945158)
chr2 (254-292)||(37731205-37731243)
chr2 (258-292)||(40210073-40210107)
chr2 (254-291)||(14876985-14877022)
chr2 (230-290)||(29684619-29684680)
chr2 (230-292)||(31389549-31389613)
chr2 (259-292)||(37003643-37003676)
chr2 (293-358)||(43513488-43513552)
chr2 (230-358)||(670402-670535)
chr2 (315-363)||(3012777-3012825)
chr2 (261-293)||(6646858-6646890)
chr2 (301-349)||(7664006-7664053)
chr2 (256-292)||(9194270-9194306)
chr2 (260-292)||(9760051-9760083)
chr2 (258-290)||(12784406-12784438)
chr2 (256-292)||(14499029-14499065)
chr2 (261-293)||(32972911-32972943)
chr2 (294-358)||(33780325-33780389)
chr2 (256-292)||(34372877-34372912)
chr2 (256-292)||(34431832-34431868)
[»] chr1 (90 HSPs)
chr1 (230-358)||(13489665-13489803)
chr1 (230-358)||(52362485-52362623)
chr1 (230-358)||(10889976-10890114)
chr1 (230-358)||(15704992-15705130)
chr1 (230-358)||(34254281-34254419)
chr1 (251-356)||(52267228-52267341)
chr1 (261-363)||(8200110-8200221)
chr1 (253-351)||(32915009-32915116)
chr1 (258-363)||(50824773-50824887)
chr1 (261-357)||(18336181-18336286)
chr1 (293-358)||(50328071-50328136)
chr1 (267-358)||(40316874-40316974)
chr1 (231-358)||(47215660-47215796)
chr1 (261-351)||(50781507-50781606)
chr1 (230-358)||(52714831-52714969)
chr1 (293-358)||(35136920-35136985)
chr1 (230-358)||(26967213-26967350)
chr1 (230-351)||(33125262-33125391)
chr1 (230-357)||(46172338-46172474)
chr1 (261-363)||(15015433-15015544)
chr1 (293-351)||(3225997-3226055)
chr1 (293-351)||(4469365-4469423)
chr1 (261-358)||(19969492-19969598)
chr1 (230-342)||(33054034-33054156)
chr1 (254-351)||(38713598-38713704)
chr1 (302-359)||(6143768-6143825)
chr1 (261-363)||(33358083-33358195)
chr1 (294-363)||(45417849-45417918)
chr1 (293-358)||(48326044-48326109)
chr1 (262-363)||(29154816-29154924)
chr1 (262-361)||(49241432-49241540)
chr1 (261-351)||(8447771-8447870)
chr1 (293-368)||(35539193-35539268)
chr1 (225-358)||(36577342-36577485)
chr1 (261-343)||(48220089-48220180)
chr1 (254-322)||(50775122-50775200)
chr1 (230-292)||(51286372-51286435)
chr1 (301-358)||(4509399-4509457)
chr1 (258-292)||(8846005-8846039)
chr1 (230-358)||(44789074-44789211)
chr1 (230-358)||(46543373-46543510)
chr1 (293-363)||(47721485-47721555)
chr1 (293-363)||(47728477-47728547)
chr1 (293-363)||(48624952-48625022)
chr1 (306-363)||(2211117-2211174)
chr1 (230-357)||(8411649-8411786)
chr1 (230-287)||(15083061-15083118)
chr1 (293-358)||(30658779-30658843)
chr1 (256-292)||(1689421-1689457)
chr1 (224-358)||(3603108-3603252)
chr1 (254-363)||(29147799-29147916)
chr1 (256-292)||(30536021-30536057)
chr1 (224-292)||(37685328-37685396)
chr1 (224-292)||(37700122-37700190)
chr1 (261-358)||(41507124-41507231)
chr1 (258-349)||(46281468-46281568)
chr1 (293-349)||(46911369-46911424)
chr1 (230-292)||(5771753-5771816)
chr1 (230-292)||(7171241-7171304)
chr1 (254-322)||(9566926-9567004)
chr1 (230-292)||(16986941-16987004)
chr1 (253-292)||(47214235-47214274)
chr1 (261-351)||(50882047-50882146)
chr1 (230-358)||(756859-756997)
chr1 (230-292)||(8350202-8350264)
chr1 (230-292)||(12657225-12657287)
chr1 (226-292)||(29359638-29359704)
chr1 (230-292)||(35369703-35369765)
chr1 (293-367)||(35539280-35539354)
chr1 (258-292)||(40328746-40328780)
chr1 (302-363)||(43769703-43769765)
chr1 (230-358)||(46082051-46082189)
chr1 (262-292)||(48470674-48470704)
chr1 (254-292)||(48858851-48858889)
chr1 (254-292)||(48983673-48983711)
chr1 (258-292)||(52437526-52437560)
chr1 (293-358)||(7128194-7128259)
chr1 (301-358)||(25259167-25259224)
chr1 (228-292)||(29585994-29586059)
chr1 (230-287)||(45333573-45333630)
chr1 (293-358)||(50433845-50433910)
chr1 (255-292)||(51436777-51436814)
chr1 (256-292)||(649798-649834)
chr1 (256-292)||(740961-740997)
chr1 (256-292)||(2492443-2492479)
chr1 (294-358)||(21093288-21093352)
chr1 (256-292)||(27465063-27465099)
chr1 (261-293)||(45065906-45065938)
chr1 (230-293)||(47820505-47820569)
chr1 (256-292)||(49020409-49020445)
[»] chr4 (97 HSPs)
chr4 (255-357)||(38338853-38338964)
chr4 (230-361)||(39344907-39345048)
chr4 (230-358)||(33860650-33860787)
chr4 (261-368)||(28657361-28657477)
chr4 (294-358)||(56271437-56271501)
chr4 (230-358)||(13139151-13139289)
chr4 (293-357)||(12138929-12138993)
chr4 (256-351)||(18882912-18883016)
chr4 (261-351)||(26718403-26718502)
chr4 (261-351)||(26731031-26731130)
chr4 (230-358)||(2999115-2999253)
chr4 (230-358)||(13086025-13086163)
chr4 (230-358)||(21617186-21617324)
chr4 (254-351)||(28458314-28458420)
chr4 (225-351)||(32546295-32546430)
chr4 (295-357)||(39312547-39312609)
chr4 (230-350)||(40609613-40609741)
chr4 (293-358)||(46405904-46405969)
chr4 (225-292)||(7627846-7627914)
chr4 (302-358)||(13104312-13104368)
chr4 (230-358)||(22819652-22819790)
chr4 (261-358)||(31657681-31657787)
chr4 (256-349)||(37514071-37514173)
chr4 (230-292)||(40348797-40348859)
chr4 (256-349)||(42815434-42815536)
chr4 (293-351)||(51573569-51573627)
chr4 (293-358)||(14010048-14010113)
chr4 (293-358)||(49768248-49768313)
chr4 (293-362)||(49896592-49896661)
chr4 (230-358)||(9362609-9362746)
chr4 (301-357)||(27326683-27326739)
chr4 (226-292)||(38519792-38519859)
chr4 (261-363)||(43769746-43769857)
chr4 (230-285)||(50050641-50050696)
chr4 (295-357)||(53405760-53405823)
chr4 (253-292)||(56557760-56557799)
chr4 (230-292)||(2268513-2268575)
chr4 (230-358)||(9118794-9118932)
chr4 (301-351)||(12799798-12799848)
chr4 (293-355)||(23853810-23853872)
chr4 (230-358)||(30079849-30079987)
chr4 (293-362)||(31092585-31092655)
chr4 (230-292)||(37297052-37297114)
chr4 (230-358)||(50273003-50273135)
chr4 (301-351)||(52846166-52846216)
chr4 (224-292)||(439265-439334)
chr4 (265-363)||(4949545-4949651)
chr4 (293-358)||(32696257-32696322)
chr4 (301-358)||(38715331-38715388)
chr4 (292-357)||(41389804-41389868)
chr4 (301-358)||(45143603-45143660)
chr4 (301-358)||(45152372-45152429)
chr4 (225-292)||(149490-149558)
chr4 (295-351)||(1815938-1815994)
chr4 (256-292)||(44257735-44257771)
chr4 (225-288)||(47240815-47240879)
chr4 (256-292)||(56474769-56474805)
chr4 (254-350)||(336746-336851)
chr4 (230-347)||(624253-624380)
chr4 (225-287)||(14443196-14443259)
chr4 (253-292)||(30170025-30170064)
chr4 (230-292)||(39158108-39158171)
chr4 (230-289)||(45082984-45083043)
chr4 (254-350)||(50890012-50890117)
chr4 (262-292)||(1580289-1580319)
chr4 (256-349)||(3078847-3078949)
chr4 (254-292)||(5932769-5932807)
chr4 (293-351)||(13263335-13263392)
chr4 (230-292)||(29175230-29175292)
chr4 (254-292)||(31574945-31574983)
chr4 (230-358)||(41486073-41486211)
chr4 (230-292)||(46634103-46634165)
chr4 (293-358)||(47099098-47099161)
chr4 (254-292)||(51255774-51255812)
chr4 (293-351)||(51852152-51852209)
chr4 (293-363)||(53647350-53647420)
chr4 (293-363)||(53654675-53654745)
chr4 (230-290)||(4915680-4915741)
chr4 (260-289)||(22027450-22027479)
chr4 (263-292)||(31559575-31559604)
chr4 (293-358)||(36111325-36111390)
chr4 (301-358)||(47112008-47112065)
chr4 (293-358)||(51194345-51194410)
chr4 (256-292)||(10250521-10250557)
chr4 (314-358)||(17683438-17683482)
chr4 (225-292)||(26206982-26207050)
chr4 (256-292)||(31468994-31469030)
chr4 (256-292)||(32696794-32696830)
chr4 (252-292)||(38952715-38952754)
chr4 (303-358)||(42491160-42491215)
chr4 (256-288)||(47288112-47288144)
chr4 (256-288)||(48649548-48649580)
chr4 (256-292)||(48743740-48743775)
chr4 (304-348)||(53299274-53299318)
chr4 (256-292)||(54909353-54909389)
chr4 (256-292)||(55609171-55609207)
chr4 (256-292)||(55996452-55996487)
[»] scaffold0136 (1 HSPs)
scaffold0136 (230-358)||(38428-38566)
[»] scaffold0532 (1 HSPs)
scaffold0532 (255-351)||(10993-11098)
[»] scaffold1956 (1 HSPs)
scaffold1956 (293-363)||(846-916)
[»] scaffold0221 (1 HSPs)
scaffold0221 (230-358)||(8217-8355)
[»] scaffold0141 (1 HSPs)
scaffold0141 (293-358)||(12008-12073)
[»] scaffold0035 (1 HSPs)
scaffold0035 (293-351)||(71984-72042)
[»] scaffold0856 (1 HSPs)
scaffold0856 (294-358)||(1961-2024)
[»] scaffold0174 (1 HSPs)
scaffold0174 (225-292)||(34799-34867)
[»] scaffold0010 (1 HSPs)
scaffold0010 (293-363)||(134227-134298)
[»] scaffold0471 (1 HSPs)
scaffold0471 (230-358)||(10-148)
[»] scaffold0199 (1 HSPs)
scaffold0199 (227-289)||(8668-8730)
[»] scaffold0128 (1 HSPs)
scaffold0128 (254-292)||(10964-11002)
[»] scaffold0045 (1 HSPs)
scaffold0045 (254-292)||(41783-41821)
[»] scaffold0034 (1 HSPs)
scaffold0034 (254-292)||(101911-101949)
[»] scaffold0276 (1 HSPs)
scaffold0276 (256-288)||(1674-1706)
[»] scaffold0201 (1 HSPs)
scaffold0201 (256-292)||(8502-8538)


Alignment Details
Target: chr3 (Bit Score: 405; Significance: 0; HSPs: 86)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 405; E-Value: 0
Query Start/End: Original strand, 10 - 422
Target Start/End: Original strand, 10464727 - 10465139
Alignment:
Q  10 attattctaaaaaacacataatgcagccatgtaaattgaccaattaacttgctgtcctcttctgtccacgtgtcaacctaaccaagagggctaatagaca 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10464727 attattctaaaaaacacataatgcagccatgtaaattgaccaattaacttgctgtcctcttctgtccacgtgtcaacctaaccaagagggctaatagaca 10464826  T
Q  110 tcaacaatgagactatggatcgctgataccgtagatcatgccatccctggtttaagcatatgaagacacctcaaaaatctactttctagcgtcatcaact 209  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10464827 tgaacaatgagactatggatcgctgataccgtagatcatgccatccctggtttaagcatatgaagacacctcaaaaatctactttctagcgtcatcaact 10464926  T
Q  210 acagagctaaatttaatgaaaaatgatatttgaacattcatcaatgacaatttttgtgacaattttctctctcatactcacatctttatcactctattgc 309  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10464927 acagagctaaatttaatgaaaaatgatatttgaacattcatcaatgaaaatttttgtgacaattttctctctcatactcacatctttatcactctattgc 10465026  T
Q  310 tttggtttttgtgcaaatacctattttttctttgtaaattatagttgtctcatagttgttcaaataatactcctcaaatttaatacaaaacctagctatc 409  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10465027 tttggtttttgtgcaaatacctattttttctttgtaaattatagttgtctcatagttgttcaaataatactcctcaaatttaatacaaaacctagctatc 10465126  T
Q  410 cctacatttcttt 422  Q
    |||||||||||||    
T  10465127 cctacatttcttt 10465139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 230 - 358
Target Start/End: Complemental strand, 24095474 - 24095336
Alignment:
Q  230 aaatgatatttgaacattcatca-atgacaatttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttggttttt 319  Q
    ||||||||||||||||| |||   |||| |||||||||||||| ||||||||||||||||||||         ||||||  ||||||||||||||||||     
T  24095474 aaatgatatttgaacatccattttatgataatttttgtgacaactttctctctcatactcacattattttttactttatttctctattgctttggttttc 24095375  T
Q  320 gtgcaaatacctattttttctttgtaaattatagttgtc 358  Q
    ||||||||||||| |||||||||||||||||| ||||||    
T  24095374 gtgcaaatacctactttttctttgtaaattatggttgtc 24095336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 230 - 358
Target Start/End: Original strand, 55400002 - 55400140
Alignment:
Q  230 aaatgatatttgaacattcatca-atgacaatttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttggttttt 319  Q
    ||||||||||||||||| |||   ||||||| ||||||||||| ||||||||||||||||||||         ||||||| ||||||||||||||||||     
T  55400002 aaatgatatttgaacatccattttatgacaacttttgtgacaactttctctctcatactcacattactttttactttatctctctattgctttggttttc 55400101  T
Q  320 gtgcaaatacctattttttctttgtaaattatagttgtc 358  Q
    ||||||||||| ||||||||||| |||||||| ||||||    
T  55400102 gtgcaaataccaattttttctttataaattatggttgtc 55400140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 230 - 358
Target Start/End: Original strand, 20080076 - 20080213
Alignment:
Q  230 aaatgatatttgaacattcatc-aatgacaatttttgtgacaattttctctctcatactcacat--------ctttatcactctattgctttggtttttg 320  Q
    ||||| ||||||||||| |||  |||||||||||||||||||| ||||||||||||||||||||        ||||||| |||||||| ||||||||  |    
T  20080076 aaatggtatttgaacatccatttaatgacaatttttgtgacaactttctctctcatactcacattatttttactttatctctctattgttttggtttccg 20080175  T
Q  321 tgcaaatacctattttttctttgtaaattatagttgtc 358  Q
    |||||||||||| ||||||||| |||||||| ||||||    
T  20080176 tgcaaatacctactttttctttataaattatggttgtc 20080213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 255 - 357
Target Start/End: Original strand, 46019491 - 46019602
Alignment:
Q  255 gacaatttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgta 345  Q
    ||||| ||||||||||| ||||||||||||||||||||         ||||||| |||||||||||||||||| || ||||||||||| |||||||||||    
T  46019491 gacaacttttgtgacaactttctctctcatactcacattactttttactttatctctctattgctttggttttcgtacaaatacctatcttttctttgta 46019590  T
Q  346 aattatagttgt 357  Q
    |||||| |||||    
T  46019591 aattatggttgt 46019602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 261 - 351
Target Start/End: Original strand, 49761342 - 49761441
Alignment:
Q  261 ttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattat 351  Q
    ||||||||||| ||||||||||||||||||||         ||||||| |||||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  49761342 ttttgtgacaactttctctctcatactcacattattttttactttatctctctattgctttggtttttgtgcaaatacctactttttctttataaattat 49761441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 230 - 358
Target Start/End: Complemental strand, 37927273 - 37927135
Alignment:
Q  230 aaatgatatttgaacattcatcaa-tgacaatttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttggttttt 319  Q
    ||||||||||||||||| |||    |||||| ||||||||||| ||||||||||||||||||||         ||||||| |||||||||||||||||      
T  37927273 aaatgatatttgaacatccatttggtgacaacttttgtgacaactttctctctcatactcacataattttttactttatctctctattgctttggtttcc 37927174  T
Q  320 gtgcaaatacctattttttctttgtaaattatagttgtc 358  Q
    || |||||||||||||||||||| |||||||| ||||||    
T  37927173 gtacaaatacctattttttctttataaattatggttgtc 37927135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 230 - 358
Target Start/End: Complemental strand, 39697290 - 39697152
Alignment:
Q  230 aaatgatatttgaacattcatcaa-tgacaatttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttggttttt 319  Q
    ||||||||||||||||| |||    ||| ||||||||| |||| ||||||||||||||||||||         ||||||| ||||||||||||||||||     
T  39697290 aaatgatatttgaacatccattttgtgataatttttgtaacaactttctctctcatactcacattactttttactttatctctctattgctttggttttc 39697191  T
Q  320 gtgcaaatacctattttttctttgtaaattatagttgtc 358  Q
    ||||||||| | |||||||||||||||||||| ||||||    
T  39697190 gtgcaaatatcaattttttctttgtaaattatggttgtc 39697152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 253 - 352
Target Start/End: Original strand, 51343435 - 51343543
Alignment:
Q  253 atgacaatttttgtgacaattttctctctcatactcacatc---------tttatcactctattgctttggtttttgtgcaaatacctattttttctttg 343  Q
    ||||||| ||||||||||||||||||||||||||| ||||          |||||| |||||||||||| |||||||| ||||||||||| |||||||||    
T  51343435 atgacaacttttgtgacaattttctctctcatacttacattatcttttaatttatctctctattgctttagtttttgtacaaatacctatattttctttg 51343534  T
Q  344 taaattata 352  Q
    |||||||||    
T  51343535 taaattata 51343543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 293 - 361
Target Start/End: Original strand, 52937259 - 52937327
Alignment:
Q  293 ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattatagttgtctca 361  Q
    ||||||| ||||||| ||||| |||||||||||||||| |||||||||||||||||||| |||||||||    
T  52937259 ctttatctctctattactttgatttttgtgcaaataccaattttttctttgtaaattatggttgtctca 52937327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 261 - 358
Target Start/End: Complemental strand, 3281752 - 3281646
Alignment:
Q  261 ttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattat 351  Q
    ||||||||||| ||||||||| ||||||||||         ||||||| || ||||||||||||||||||  ||||||||||||||||||||||||||||    
T  3281752 ttttgtgacaactttctctcttatactcacattactttttactttatctctttattgctttggtttttgtataaatacctattttttctttgtaaattat 3281653  T
Q  352 agttgtc 358  Q
     ||||||    
T  3281652 ggttgtc 3281646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 293 - 358
Target Start/End: Original strand, 24645432 - 24645497
Alignment:
Q  293 ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattatagttgtc 358  Q
    ||||||| |||||||| ||||||||| |||||| ||||||||||||||||||||||||| ||||||    
T  24645432 ctttatctctctattgttttggttttcgtgcaagtacctattttttctttgtaaattatggttgtc 24645497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 224 - 358
Target Start/End: Original strand, 46253619 - 46253763
Alignment:
Q  224 aatgaaaaatgatatttgaacattcatca-atgacaatttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttg 313  Q
    ||||| ||||||||||||||||| |||   | ||||| |||||  |||||||| ||||||||||||||||         ||||||| |||||||||||||    
T  46253619 aatgacaaatgatatttgaacatccattttacgacaacttttgcaacaattttttctctcatactcacattactttttactttatctctctattgctttg 46253718  T
Q  314 gtttttgtgcaaatacctattttttctttgtaaattatagttgtc 358  Q
    ||||| ||||||||||| |  ||||||||||||||||| ||||||    
T  46253719 gttttcgtgcaaataccaacattttctttgtaaattatggttgtc 46253763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 230 - 351
Target Start/End: Original strand, 8846494 - 8846625
Alignment:
Q  230 aaatgatatttgaacattcat-caatgacaatttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttggttttt 319  Q
    |||||||||||||||||  || | || |||| ||||||||||||||||||||||||||||||||         ||||||| ||| |||| |||||||| |    
T  8846494 aaatgatatttgaacatctattcgataacaacttttgtgacaattttctctctcatactcacattattttttactttatctctccattgttttggtttct 8846593  T
Q  320 gtgcaaatacctattttttctttgtaaattat 351  Q
    || ||||||| |||||||||||| ||||||||    
T  8846594 gtacaaatacttattttttctttataaattat 8846625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 293 - 351
Target Start/End: Complemental strand, 24480446 - 24480388
Alignment:
Q  293 ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattat 351  Q
    |||||||  |||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  24480446 ctttatctatctattactttggtttttgtgcaaatacctactttttctttgtaaattat 24480388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 293 - 358
Target Start/End: Complemental strand, 51465909 - 51465844
Alignment:
Q  293 ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattatagttgtc 358  Q
    ||||||| ||||||||||||| |||| ||||||||||| | |||||||||||||||||| ||||||    
T  51465909 ctttatctctctattgctttgattttcgtgcaaataccaactttttctttgtaaattatggttgtc 51465844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 230 - 360
Target Start/End: Original strand, 42683830 - 42683970
Alignment:
Q  230 aaatgatatttgaacattcatcaa-tgacaatttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttggttttt 319  Q
    |||||||||||||||||||||    ||| ||||||||| |||||||||||| |||||| |||||         ||||||| ||||||||||||| ||||     
T  42683830 aaatgatatttgaacattcattttgtgataatttttgttacaattttctctttcatacccacattatcttttactttatctctctattgctttgattttc 42683929  T
Q  320 gtgcaaatacctattttttctttgtaaattatagttgtctc 360  Q
    |||||||||||| || |||||||  ||||||| ||||||||    
T  42683930 gtgcaaatacctgttctttctttacaaattatggttgtctc 42683970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 230 - 351
Target Start/End: Original strand, 21196127 - 21196258
Alignment:
Q  230 aaatgatatttgaacattcatcaa-tgacaatttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttggttttt 319  Q
    ||||||||||||||||| |||    |||||| || |||||||| ||||||||||||||| ||||         ||||||| ||||||| ||||| ||||     
T  21196127 aaatgatatttgaacatccattttgtgacaacttctgtgacaactttctctctcatacttacattattttttactttatctctctattactttgattttc 21196226  T
Q  320 gtgcaaatacctattttttctttgtaaattat 351  Q
    |||||||||| |||||||||||||||||||||    
T  21196227 gtgcaaatacatattttttctttgtaaattat 21196258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 225 - 358
Target Start/End: Complemental strand, 34058026 - 34057883
Alignment:
Q  225 atgaaaaatgatatttgaacattcatca-atgacaatttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttgg 314  Q
    |||| ||||||||||||||||| |||   |||| || ||||||||||| |||||||||||||||||| |         |||||||  ||||||||||||     
T  34058026 atgagaaatgatatttgaacatccattttatgataacttttgtgacaactttctctctcatactcacgttactttttactttatctttctattgctttgt 34057927  T
Q  315 tttttgtgcaaatacctattttttctttgtaaattatagttgtc 358  Q
    |||| |||||| |||| | ||||||||| |||||||||||||||    
T  34057926 ttttcgtgcaattaccaactttttctttataaattatagttgtc 34057883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 301 - 363
Target Start/End: Original strand, 6999254 - 6999316
Alignment:
Q  301 ctctattgctttggtttttgtgcaaatacctattttttctttgtaaattatagttgtctcata 363  Q
    ||||||||||||| |||| |||||||||| ||||||||| ||||||||||| |||||| ||||    
T  6999254 ctctattgctttgattttcgtgcaaatacatattttttcattgtaaattatggttgtcccata 6999316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 301 - 363
Target Start/End: Original strand, 36412207 - 36412269
Alignment:
Q  301 ctctattgctttggtttttgtgcaaatacctattttttctttgtaaattatagttgtctcata 363  Q
    ||||||||||||| |||| |||||||||| |||| |||||||||||||||| |||||| ||||    
T  36412207 ctctattgctttgattttcgtgcaaatacatattctttctttgtaaattatggttgtcccata 36412269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 230 - 358
Target Start/End: Complemental strand, 44677552 - 44677414
Alignment:
Q  230 aaatgatatttgaacattcatcaa-tgacaatttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttggttttt 319  Q
    ||||||||||||||||| |||  | |||||| |||||  |||||||||||||||||||||||||         ||||||| |||||||||| ||||||      
T  44677552 aaatgatatttgaacatccatttagtgacaacttttgcaacaattttctctctcatactcacattattttttactttatctctctattgctatggtttcc 44677453  T
Q  320 gtgcaaatacctattttttctttgtaaattatagttgtc 358  Q
    |||| ||||||  ||||||||||||||| ||| ||||||    
T  44677452 gtgccaataccacttttttctttgtaaagtatggttgtc 44677414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 230 - 358
Target Start/End: Complemental strand, 50207038 - 50206900
Alignment:
Q  230 aaatgatatttgaacattcatcaa-tgacaatttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttggttttt 319  Q
    ||||||||||||||||| |||    |||||| |||||  |||| ||||||||||||||||||||         ||||||| |||||||| |||||||||     
T  50207038 aaatgatatttgaacatccattttgtgacaacttttgcaacaactttctctctcatactcacattactttttactttatctctctattgttttggttttc 50206939  T
Q  320 gtgcaaatacctattttttctttgtaaattatagttgtc 358  Q
    ||||||||| | | |||||||||||||||||| ||||||    
T  50206938 gtgcaaatatcaactttttctttgtaaattatggttgtc 50206900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 254 - 358
Target Start/End: Complemental strand, 50638392 - 50638281
Alignment:
Q  254 tgacaatttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgt 344  Q
    |||||||||||||||||| ||||||||  ||||||||||         ||||||| |||||||||||||||||  |||||||||||||  |||||||| |    
T  50638392 tgacaatttttgtgacaactttctctc--atactcacataattttttactttatctctctattgctttggtttccgtgcaaatacctacattttctttat 50638295  T
Q  345 aaattatagttgtc 358  Q
    ||||||| ||||||    
T  50638294 aaattatggttgtc 50638281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 253 - 361
Target Start/End: Complemental strand, 3953519 - 3953402
Alignment:
Q  253 atgacaatttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttggtttttgtgcaaatacctattttttctttg 343  Q
    |||| |||||||||||||| ||||||||||||||||||||         || |||| ||||||||||||||||||  |||||||| | | |||||||||     
T  3953519 atgataatttttgtgacaactttctctctcatactcacattactttttactctatctctctattgctttggttttcatgcaaatatcaactttttcttta 3953420  T
Q  344 taaattatagttgtctca 361  Q
    ||||||||  ||||||||    
T  3953419 taaattatgattgtctca 3953402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 293 - 358
Target Start/End: Original strand, 26672474 - 26672539
Alignment:
Q  293 ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattatagttgtc 358  Q
    ||||||| |||||||| |||| ||| ||||||||||| || |||||||||||||||||| ||||||    
T  26672474 ctttatctctctattgttttgatttctgtgcaaatacttactttttctttgtaaattatggttgtc 26672539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 293 - 358
Target Start/End: Complemental strand, 54694108 - 54694043
Alignment:
Q  293 ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattatagttgtc 358  Q
    ||||||| ||||||||||||| |||| ||||||||||||||| |||||||  ||||||| ||||||    
T  54694108 ctttatctctctattgctttgattttcgtgcaaatacctattctttctttacaaattatggttgtc 54694043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 301 - 357
Target Start/End: Complemental strand, 41281708 - 41281652
Alignment:
Q  301 ctctattgctttggtttttgtgcaaatacctattttttctttgtaaattatagttgt 357  Q
    |||||||| |||||||||||||||||| |||| ||||| |||||||||| |||||||    
T  41281708 ctctattgttttggtttttgtgcaaatgcctactttttttttgtaaattttagttgt 41281652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 261 - 363
Target Start/End: Complemental strand, 1337875 - 1337768
Alignment:
Q  261 ttttgtgacaattttctctctcatactcacatc-tttatcact----ctattgctttggtttttgtgcaaatacctattttttctttgtaaattatagtt 355  Q
    |||| |||||||||||| ||||||||||||||  ||| | |||    |||||| ||||||||| ||||||||| |||  |||||||| |||||||| |||    
T  1337875 ttttatgacaattttctatctcatactcacattattttttactttatctattgttttggttttggtgcaaatatctacattttctttataaattatggtt 1337776  T
Q  356 gtctcata 363  Q
    ||||||||    
T  1337775 gtctcata 1337768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 268 - 351
Target Start/End: Complemental strand, 3347151 - 3347064
Alignment:
Q  268 acaattttctctctcatactcacatc----tttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattat 351  Q
    |||| ||||||||||||| ||||||     |||||| ||||||||||||| |||| ||||||||||||||| |||||||  |||||||    
T  3347151 acaactttctctctcatattcacattattttttatctctctattgctttgattttcgtgcaaatacctattctttctttacaaattat 3347064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 254 - 292
Target Start/End: Complemental strand, 6178469 - 6178431
Alignment:
Q  254 tgacaatttttgtgacaattttctctctcatactcacat 292  Q
    |||||| ||||||||||||||||||||||||||||||||    
T  6178469 tgacaacttttgtgacaattttctctctcatactcacat 6178431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 230 - 358
Target Start/End: Complemental strand, 24483031 - 24482893
Alignment:
Q  230 aaatgatatttgaacattcatcaa-tgacaatttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttggttttt 319  Q
    ||||||||||||||||| |||    |||||| |||||  |||| ||||||||||||||||||||         ||||||| || ||||| |||||||||     
T  24483031 aaatgatatttgaacatccattttgtgacaacttttgcaacaactttctctctcatactcacattactttttactttatctctatattgttttggttttc 24482932  T
Q  320 gtgcaaatacctattttttctttgtaaattatagttgtc 358  Q
    ||||||||||| | ||||||||||||| |||| ||||||    
T  24482931 gtgcaaataccaactttttctttgtaagttatggttgtc 24482893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 301 - 351
Target Start/End: Original strand, 26645110 - 26645160
Alignment:
Q  301 ctctattgctttggtttttgtgcaaatacctattttttctttgtaaattat 351  Q
    ||||||||||||||||||  |||||||| ||| ||||||||||||||||||    
T  26645110 ctctattgctttggttttcatgcaaatatctactttttctttgtaaattat 26645160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 256 - 349
Target Start/End: Complemental strand, 29573397 - 29573295
Alignment:
Q  256 acaatttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaa 346  Q
    |||| ||||||||||| ||||||||||||||||||||         ||||||| ||||||||||||| |||| |||| || ||||| |||| ||||||||    
T  29573397 acaacttttgtgacaactttctctctcatactcacatatgtttttactttatctctctattgctttgattttcgtgccaaaacctacttttcctttgtaa 29573298  T
Q  347 att 349  Q
    |||    
T  29573297 att 29573295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 230 - 358
Target Start/End: Complemental strand, 31376833 - 31376696
Alignment:
Q  230 aaatgatatttgaacattcatcaa-tgacaatttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttggttttt 319  Q
    ||||||||||||||||| |||    |||||| |||||| |||| ||||||| ||||||||||||         ||||||| ||||||||||||| ||||     
T  31376833 aaatgatatttgaacatccattttgtgacaacttttgttacaactttctctttcatactcacataattttttactttatctctctattgctttgattttc 31376734  T
Q  320 gtgcaaatacctattttttctttgtaaattatagttgtc 358  Q
    |||||| ||||||||||||||||| ||||| | ||||||    
T  31376733 gtgcaa-tacctattttttctttgcaaattttggttgtc 31376696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 294 - 364
Target Start/End: Original strand, 37410952 - 37411022
Alignment:
Q  294 tttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattatagttgtctcatag 364  Q
    |||||| || |||||||||| |||| | ||||||||||| |||| ||||||||||||| ||||| ||||||    
T  37410952 tttatctctttattgctttgattttcgcgcaaatacctacttttactttgtaaattatggttgtttcatag 37411022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 254 - 292
Target Start/End: Complemental strand, 42358682 - 42358644
Alignment:
Q  254 tgacaatttttgtgacaattttctctctcatactcacat 292  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  42358682 tgacaatttttgtgacaactttctctctcatactcacat 42358644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 230 - 358
Target Start/End: Original strand, 43904976 - 43905114
Alignment:
Q  230 aaatgatatttgaacattcatcaa-tgacaatttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttggttttt 319  Q
    ||||||||||||||||| |||  | ||| ||||||||| |||| ||||||||||||||||||||         ||||||| |||||||| | |||||| |    
T  43904976 aaatgatatttgaacatccatttagtgataatttttgtaacaactttctctctcatactcacattactttttactttatctctctattgttatggtttct 43905075  T
Q  320 gtgcaaatacctattttttctttgtaaattatagttgtc 358  Q
    |||  ||||||  ||||||||||||||| ||| ||||||    
T  43905076 gtgtcaataccacttttttctttgtaaaatatggttgtc 43905114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 230 - 351
Target Start/End: Complemental strand, 46852199 - 46852069
Alignment:
Q  230 aaatgatatttgaacattcatcaatgacaatttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttggtttttg 320  Q
    ||||||||||||||||| |||  |||| |  ||||||||||| ||||||||||||||||| ||         ||||||   ||||||| ||||||||| |    
T  46852199 aaatgatatttgaacatccatttatgatagcttttgtgacaactttctctctcatactcatattactttttactttatttgtctattgttttggttttcg 46852100  T
Q  321 tgcaaatacctattttttctttgtaaattat 351  Q
    |||||||| | | ||||||||||||||||||    
T  46852099 tgcaaatatcaactttttctttgtaaattat 46852069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 256 - 289
Target Start/End: Original strand, 40367638 - 40367671
Alignment:
Q  256 acaatttttgtgacaattttctctctcatactca 289  Q
    ||||||||||||||||||||||||||||||||||    
T  40367638 acaatttttgtgacaattttctctctcatactca 40367671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 294 - 351
Target Start/End: Original strand, 46094488 - 46094545
Alignment:
Q  294 tttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattat 351  Q
    |||||| ||||||||||||| ||||||| |||||||||||| ||| |||| |||||||    
T  46094488 tttatctctctattgctttgatttttgtacaaatacctattatttttttgcaaattat 46094545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 228 - 292
Target Start/End: Original strand, 49167751 - 49167816
Alignment:
Q  228 aaaaatgatatttgaacattcatca-atgacaatttttgtgacaattttctctctcatactcacat 292  Q
    ||||||||||||||||||| |||   ||||||| ||||||||||| |||||||||||||| |||||    
T  49167751 aaaaatgatatttgaacatccatttgatgacaacttttgtgacaactttctctctcatacacacat 49167816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 230 - 290
Target Start/End: Complemental strand, 20548058 - 20547998
Alignment:
Q  230 aaatgatatttgaacattcatcaatgacaatttttgtgacaattttctctctcatactcac 290  Q
    |||||||||||||||| |||    | |||| ||||||||||||||||||||||||||||||    
T  20548058 aaatgatatttgaacaatcagtttttacaacttttgtgacaattttctctctcatactcac 20547998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 292
Target Start/End: Original strand, 41505492 - 41505556
Alignment:
Q  228 aaaaatgatatttgaacattcatcaatgacaatttttgtgacaattttctctctcatactcacat 292  Q
    |||||||||||||||||| | ||   | |||| ||||||||||| ||||||||||||||||||||    
T  41505492 aaaaatgatatttgaacaattattttttacaacttttgtgacaactttctctctcatactcacat 41505556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 292
Target Start/End: Complemental strand, 45711481 - 45711445
Alignment:
Q  256 acaatttttgtgacaattttctctctcatactcacat 292  Q
    |||| ||||||||||||||||||||||||||||||||    
T  45711481 acaacttttgtgacaattttctctctcatactcacat 45711445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 253 - 292
Target Start/End: Original strand, 10811162 - 10811201
Alignment:
Q  253 atgacaatttttgtgacaattttctctctcatactcacat 292  Q
    ||||||| ||||||||||| ||||||||||||||||||||    
T  10811162 atgacaacttttgtgacaactttctctctcatactcacat 10811201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 225 - 292
Target Start/End: Original strand, 26014810 - 26014877
Alignment:
Q  225 atgaaaaatgatatttgaacattcatcaatgacaatttttgtgacaattttctctctcatactcacat 292  Q
    |||| ||||||||||||||||  |||   | |||| ||||||||||| ||||||||||||||||||||    
T  26014810 atgagaaatgatatttgaacaaccattttttacaacttttgtgacaactttctctctcatactcacat 26014877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 230 - 292
Target Start/End: Original strand, 26996319 - 26996382
Alignment:
Q  230 aaatgatatttgaacattcatcaa-tgacaatttttgtgacaattttctctctcatactcacat 292  Q
    |||||||||||||||||||||  | | |||| |||||| |||| ||||||||||||||||||||    
T  26996319 aaatgatatttgaacattcatttagtaacaacttttgtaacaactttctctctcatactcacat 26996382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 225 - 287
Target Start/End: Complemental strand, 30863149 - 30863086
Alignment:
Q  225 atgaaaaatgatatttgaacattcatca-atgacaatttttgtgacaattttctctctcatact 287  Q
    |||| ||||||||||||||||| |||   |||| |||||||||||||| |||||||||||||||    
T  30863149 atgagaaatgatatttgaacatccatttgatgataatttttgtgacaactttctctctcatact 30863086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 225 - 292
Target Start/End: Original strand, 38671616 - 38671683
Alignment:
Q  225 atgaaaaatgatatttgaacattcatcaatgacaatttttgtgacaattttctctctcatactcacat 292  Q
    |||| ||||||||||||||||  |||   | | ||||||||||||||||||||||||| |||||||||    
T  38671616 atgagaaatgatatttgaacaaccattttttataatttttgtgacaattttctctctcgtactcacat 38671683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 253 - 292
Target Start/End: Original strand, 49417602 - 49417641
Alignment:
Q  253 atgacaatttttgtgacaattttctctctcatactcacat 292  Q
    ||||||| ||||||||||| ||||||||||||||||||||    
T  49417602 atgacaacttttgtgacaactttctctctcatactcacat 49417641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 230 - 292
Target Start/End: Original strand, 5244232 - 5244294
Alignment:
Q  230 aaatgatatttgaacattcatcaatgacaatttttgtgacaattttctctctcatactcacat 292  Q
    ||||||||||||||||  |||   | |||| ||||||||||| ||||||||||||||||||||    
T  5244232 aaatgatatttgaacaaccatattttacaacttttgtgacaactttctctctcatactcacat 5244294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 230 - 292
Target Start/End: Complemental strand, 7668255 - 7668193
Alignment:
Q  230 aaatgatatttgaacattcatcaatgacaatttttgtgacaattttctctctcatactcacat 292  Q
    |||||||||||||||| ||||   | |||| |||| |||||||||||||||| ||||||||||    
T  7668255 aaatgatatttgaacaatcattttttacaacttttttgacaattttctctcttatactcacat 7668193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 221 - 345
Target Start/End: Original strand, 22371185 - 22371319
Alignment:
Q  221 tttaatgaaaaatgatatttgaacattcatcaa-tgacaatttttgtgacaattttctctctcatactcacat---------ctttatcactctattgct 310  Q
    ||||| || ||||||||||||||||| |||  | ||| || |||||| | |||||||||||||||||| ||||         ||||||| ||||||||||    
T  22371185 tttaaggagaaatgatatttgaacatccatttagtgataacttttgtaataattttctctctcatacttacattattttttactttatctctctattgct 22371284  T
Q  311 ttggtttttgtgcaaatacctattttttctttgta 345  Q
     |||||| | ||| |||||| ||||||||||||||    
T  22371285 atggtttctttgccaataccaattttttctttgta 22371319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 230 - 292
Target Start/End: Complemental strand, 27541570 - 27541508
Alignment:
Q  230 aaatgatatttgaacattcatcaatgacaatttttgtgacaattttctctctcatactcacat 292  Q
    ||||||||||||||||  |||   | |||| ||| ||||||||||||||||||||||||||||    
T  27541570 aaatgatatttgaacaaccattttttacaactttagtgacaattttctctctcatactcacat 27541508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 230 - 292
Target Start/End: Original strand, 35597165 - 35597227
Alignment:
Q  230 aaatgatatttgaacattcatcaatgacaatttttgtgacaattttctctctcatactcacat 292  Q
    ||||||||||||||||  |||   | |||||||| ||||||| ||||||||||||||||||||    
T  35597165 aaatgatatttgaacaaacattttttacaattttagtgacaactttctctctcatactcacat 35597227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 230 - 292
Target Start/End: Complemental strand, 36671082 - 36671020
Alignment:
Q  230 aaatgatatttgaacattcatcaatgacaatttttgtgacaattttctctctcatactcacat 292  Q
    ||||||||||||||||  |||   | |||||||||||||||| ||| ||||||||||||||||    
T  36671082 aaatgatatttgaacaaccattttttacaatttttgtgacaactttttctctcatactcacat 36671020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 230 - 358
Target Start/End: Complemental strand, 37508566 - 37508428
Alignment:
Q  230 aaatgatatttgaacattcatcaa-tgacaatttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttggttttt 319  Q
    ||||||||||||||||| |||  | ||| || |||||  |||| ||||||||||||||||||||         ||||||| |||||||||| ||||||      
T  37508566 aaatgatatttgaacatccatttagtgataacttttgcaacaactttctctctcatactcacattactttttactttatctctctattgctatggtttcc 37508467  T
Q  320 gtgcaaatacctattttttctttgtaaattatagttgtc 358  Q
    |||| ||||||  ||||||||||||||| ||| ||||||    
T  37508466 gtgccaataccacttttttctttgtaaaatatggttgtc 37508428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 254 - 292
Target Start/End: Complemental strand, 41443234 - 41443196
Alignment:
Q  254 tgacaatttttgtgacaattttctctctcatactcacat 292  Q
    |||||| |||||||| |||||||||||||||||||||||    
T  41443234 tgacaacttttgtgataattttctctctcatactcacat 41443196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 262 - 292
Target Start/End: Original strand, 49196731 - 49196761
Alignment:
Q  262 tttgtgacaattttctctctcatactcacat 292  Q
    |||||||||||||||||||||||||||||||    
T  49196731 tttgtgacaattttctctctcatactcacat 49196761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 254 - 292
Target Start/End: Complemental strand, 50559255 - 50559217
Alignment:
Q  254 tgacaatttttgtgacaattttctctctcatactcacat 292  Q
    |||||| ||||||||||||||||||||||||||| ||||    
T  50559255 tgacaacttttgtgacaattttctctctcatacttacat 50559217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 321 - 363
Target Start/End: Complemental strand, 55282657 - 55282615
Alignment:
Q  321 tgcaaatacctattttttctttgtaaattatagttgtctcata 363  Q
    |||||||||| | ||||||||||||||||| ||||||||||||    
T  55282657 tgcaaataccaactttttctttgtaaattacagttgtctcata 55282615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 256 - 289
Target Start/End: Original strand, 33796296 - 33796329
Alignment:
Q  256 acaatttttgtgacaattttctctctcatactca 289  Q
    |||||||||||||||| |||||||||||||||||    
T  33796296 acaatttttgtgacaactttctctctcatactca 33796329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 293 - 358
Target Start/End: Original strand, 36121897 - 36121962
Alignment:
Q  293 ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattatagttgtc 358  Q
    ||||||| |||||||||| || ||||||||| ||||||   |||||||||||||| ||| ||||||    
T  36121897 ctttatctctctattgctatgatttttgtgccaataccacatttttctttgtaaaatatggttgtc 36121962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 294 - 358
Target Start/End: Complemental strand, 1280123 - 1280059
Alignment:
Q  294 tttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattatagttgtc 358  Q
    |||||| || ||||| |||| |||| ||  ||||| |||||||||||||||||||||| ||||||    
T  1280123 tttatctctatattgttttgattttcgtaaaaataactattttttctttgtaaattatggttgtc 1280059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 256 - 292
Target Start/End: Original strand, 7934004 - 7934040
Alignment:
Q  256 acaatttttgtgacaattttctctctcatactcacat 292  Q
    |||| |||||||| |||||||||||||||||||||||    
T  7934004 acaacttttgtgataattttctctctcatactcacat 7934040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 256 - 292
Target Start/End: Complemental strand, 14207299 - 14207263
Alignment:
Q  256 acaatttttgtgacaattttctctctcatactcacat 292  Q
    |||| ||||||||||| ||||||||||||||||||||    
T  14207299 acaacttttgtgacaactttctctctcatactcacat 14207263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 256 - 292
Target Start/End: Complemental strand, 14215047 - 14215011
Alignment:
Q  256 acaatttttgtgacaattttctctctcatactcacat 292  Q
    |||| ||||||||||| ||||||||||||||||||||    
T  14215047 acaacttttgtgacaactttctctctcatactcacat 14215011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 256 - 292
Target Start/End: Original strand, 16479661 - 16479697
Alignment:
Q  256 acaatttttgtgacaattttctctctcatactcacat 292  Q
    |||| ||||||||||| ||||||||||||||||||||    
T  16479661 acaacttttgtgacaactttctctctcatactcacat 16479697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 293 - 349
Target Start/End: Complemental strand, 16675521 - 16675465
Alignment:
Q  293 ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaatt 349  Q
    ||||||| || |||||||||| |||| |||||||||  || ||||||||||||||||    
T  16675521 ctttatctctttattgctttgtttttcgtgcaaatatatactttttctttgtaaatt 16675465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 256 - 292
Target Start/End: Complemental strand, 27718827 - 27718791
Alignment:
Q  256 acaatttttgtgacaattttctctctcatactcacat 292  Q
    |||| ||||||||||| ||||||||||||||||||||    
T  27718827 acaacttttgtgacaactttctctctcatactcacat 27718791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 256 - 292
Target Start/End: Complemental strand, 29917065 - 29917029
Alignment:
Q  256 acaatttttgtgacaattttctctctcatactcacat 292  Q
    |||| ||||||||||| ||||||||||||||||||||    
T  29917065 acaacttttgtgacaactttctctctcatactcacat 29917029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 256 - 292
Target Start/End: Complemental strand, 29966218 - 29966182
Alignment:
Q  256 acaatttttgtgacaattttctctctcatactcacat 292  Q
    |||| ||||||||||| ||||||||||||||||||||    
T  29966218 acaacttttgtgacaactttctctctcatactcacat 29966182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 256 - 288
Target Start/End: Complemental strand, 31931060 - 31931028
Alignment:
Q  256 acaatttttgtgacaattttctctctcatactc 288  Q
    |||| ||||||||||||||||||||||||||||    
T  31931060 acaacttttgtgacaattttctctctcatactc 31931028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 256 - 288
Target Start/End: Original strand, 33389038 - 33389070
Alignment:
Q  256 acaatttttgtgacaattttctctctcatactc 288  Q
    |||||||||||||||| ||||||||||||||||    
T  33389038 acaatttttgtgacaactttctctctcatactc 33389070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 253 - 293
Target Start/End: Complemental strand, 33795768 - 33795728
Alignment:
Q  253 atgacaatttttgtgacaattttctctctcatactcacatc 293  Q
    |||||||||||||||| ||||||||||| |||| |||||||    
T  33795768 atgacaatttttgtgaaaattttctctcacatattcacatc 33795728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 261 - 293
Target Start/End: Original strand, 37780347 - 37780379
Alignment:
Q  261 ttttgtgacaattttctctctcatactcacatc 293  Q
    ||||||||||| |||||||||||||||||||||    
T  37780347 ttttgtgacaactttctctctcatactcacatc 37780379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 256 - 292
Target Start/End: Complemental strand, 37894284 - 37894248
Alignment:
Q  256 acaatttttgtgacaattttctctctcatactcacat 292  Q
    |||| ||||||||||| ||||||||||||||||||||    
T  37894284 acaacttttgtgacaactttctctctcatactcacat 37894248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 257 - 285
Target Start/End: Original strand, 43143547 - 43143575
Alignment:
Q  257 caatttttgtgacaattttctctctcata 285  Q
    |||||||||||||||||||||||||||||    
T  43143547 caatttttgtgacaattttctctctcata 43143575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 256 - 292
Target Start/End: Original strand, 43720411 - 43720447
Alignment:
Q  256 acaatttttgtgacaattttctctctcatactcacat 292  Q
    |||||||||||||||||||||||||| ||||| ||||    
T  43720411 acaatttttgtgacaattttctctctaatacttacat 43720447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 256 - 292
Target Start/End: Complemental strand, 44413962 - 44413926
Alignment:
Q  256 acaatttttgtgacaattttctctctcatactcacat 292  Q
    |||| ||||||||||| ||||||||||||||||||||    
T  44413962 acaacttttgtgacaactttctctctcatactcacat 44413926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 256 - 292
Target Start/End: Original strand, 44813163 - 44813199
Alignment:
Q  256 acaatttttgtgacaattttctctctcatactcacat 292  Q
    |||||||||||||||  ||||||||||||||||||||    
T  44813163 acaatttttgtgacagctttctctctcatactcacat 44813199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 256 - 292
Target Start/End: Complemental strand, 45186593 - 45186557
Alignment:
Q  256 acaatttttgtgacaattttctctctcatactcacat 292  Q
    |||||||||||||||| |||||||||||| |||||||    
T  45186593 acaatttttgtgacaactttctctctcatgctcacat 45186557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 256 - 292
Target Start/End: Complemental strand, 45293070 - 45293034
Alignment:
Q  256 acaatttttgtgacaattttctctctcatactcacat 292  Q
    |||| ||||||||||| ||||||||||||||||||||    
T  45293070 acaacttttgtgacaactttctctctcatactcacat 45293034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 293 - 349
Target Start/End: Original strand, 45754714 - 45754770
Alignment:
Q  293 ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaatt 349  Q
    ||||||| |||||  |||||| ||||||||| || ||||| ||||||||||||||||    
T  45754714 ctttatctctctaccgctttgatttttgtgctaaaacctactttttctttgtaaatt 45754770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 256 - 292
Target Start/End: Complemental strand, 46815900 - 46815864
Alignment:
Q  256 acaatttttgtgacaattttctctctcatactcacat 292  Q
    ||||||||| |||||||||||||||||||| ||||||    
T  46815900 acaatttttttgacaattttctctctcatattcacat 46815864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 65; Significance: 2e-28; HSPs: 39)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 230 - 358
Target Start/End: Complemental strand, 2689132 - 2688995
Alignment:
Q  230 aaatgatatttgaacattcatc-aatgacaatttttgtgacaattttctctctcatactcacat--------ctttatcactctattgctttggtttttg 320  Q
    ||||||||||||||||| |||  |||||||||||||||||||| ||||||||||||||||||||        ||||||| |||||||| |||||||| ||    
T  2689132 aaatgatatttgaacatccatttaatgacaatttttgtgacaactttctctctcatactcacattatttttactttatctctctattgttttggtttatg 2689033  T
Q  321 tgcaaatacctattttttctttgtaaattatagttgtc 358  Q
    |||||||||||| ||||||||| |||||||| ||||||    
T  2689032 tgcaaatacctactttttctttataaattatggttgtc 2688995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 230 - 358
Target Start/End: Complemental strand, 32459585 - 32459446
Alignment:
Q  230 aaatgatatttgaacattcatca-atgacaatttttgtgacaattttctctctcatactcacat----------ctttatcactctattgctttggtttt 318  Q
    ||||||||||||||||| |||   ||||||| ||||||||||| ||||||||||||| ||||||          ||||||| ||||||||||||||||||    
T  32459585 aaatgatatttgaacatccattttatgacaacttttgtgacaactttctctctcatattcacattacttttttactttatctctctattgctttggtttt 32459486  T
Q  319 tgtgcaaatacctattttttctttgtaaattatagttgtc 358  Q
     ||||||||||| | |||||||||||||||||| ||||||    
T  32459485 cgtgcaaataccaactttttctttgtaaattatggttgtc 32459446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 230 - 358
Target Start/End: Complemental strand, 18141369 - 18141231
Alignment:
Q  230 aaatgatatttgaacattcatca-atgacaatttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttggttttt 319  Q
    ||||||||||| |||||||||   ||||||| ||||||||||| ||||||||||||||||||||         ||||||| ||||||||||||| ||||     
T  18141369 aaatgatatttaaacattcattttatgacaacttttgtgacaactttctctctcatactcacattactttttactttatctctctattgctttgattttc 18141270  T
Q  320 gtgcaaatacctattttttctttgtaaattatagttgtc 358  Q
    ||||| ||||| | || ||||||||||||||| ||||||    
T  18141269 gtgcacataccaacttattctttgtaaattatggttgtc 18141231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 230 - 358
Target Start/End: Complemental strand, 20822936 - 20822799
Alignment:
Q  230 aaatgatatttgaacattcatca-atgacaatttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttggttttt 319  Q
    ||||||||||||||||| |||   ||||||| ||||||||||| ||||||||||||||||||||         ||||||| ||||||||||||||||||     
T  20822936 aaatgatatttgaacatccattttatgacaacttttgtgacaactttctctctcatactcacattactttttactttatctctctattgctttggttttc 20822837  T
Q  320 gtgcaaatacctattttttctttgtaaattatagttgtc 358  Q
    ||||||||||| || |||| ||| |||||||| ||||||    
T  20822836 gtgcaaataccaatatttt-tttataaattatggttgtc 20822799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 254 - 351
Target Start/End: Complemental strand, 35213604 - 35213498
Alignment:
Q  254 tgacaatttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgt 344  Q
    |||||| |||||| |||| ||||||||||||||||||||         ||||||| |||||||||||||||||| ||||||||||| | |||||||||||    
T  35213604 tgacaacttttgtaacaactttctctctcatactcacattactttttactttatctctctattgctttggttttcgtgcaaataccaactttttctttgt 35213505  T
Q  345 aaattat 351  Q
    |||||||    
T  35213504 aaattat 35213498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 230 - 357
Target Start/End: Complemental strand, 754506 - 754369
Alignment:
Q  230 aaatgatatttgaacattcatcaa-tgacaatttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttggttttt 319  Q
    |||||||||||||||||||||    |||||| |||||  |||| ||| ||||||||||||||||         ||||||| ||||||||||||||||||     
T  754506 aaatgatatttgaacattcattttgtgacaacttttgcaacaactttttctctcatactcacattactttttactttatctctctattgctttggttttc 754407  T
Q  320 gtgcaaatacctattttttctttgtaaattatagttgt 357  Q
    ||||||||||| | |||||||||||||||||| |||||    
T  754406 gtgcaaataccaactttttctttgtaaattatggttgt 754369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 293 - 358
Target Start/End: Complemental strand, 14699659 - 14699594
Alignment:
Q  293 ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattatagttgtc 358  Q
    ||||||| |||| ||||||||||||| ||||||||||||| |||||||||||||||||| ||||||    
T  14699659 ctttatctctctgttgctttggttttcgtgcaaatacctactttttctttgtaaattattgttgtc 14699594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 293 - 361
Target Start/End: Original strand, 1369436 - 1369504
Alignment:
Q  293 ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattatagttgtctca 361  Q
    ||||||| ||||||||||||| |||| ||||||||||| | |||||||||||||||||| |||||||||    
T  1369436 ctttatctctctattgctttgattttcgtgcaaataccaactttttctttgtaaattatggttgtctca 1369504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 232 - 358
Target Start/End: Complemental strand, 13143448 - 13143312
Alignment:
Q  232 atgatatttgaacattcatcaa-tgacaatttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttggtttttgt 321  Q
    |||||||||||||||||||    ||||||||||||  |||| ||||||||||||||||||||         ||||||| ||||||||||||| |||| ||    
T  13143448 atgatatttgaacattcattttgtgacaatttttgcaacaactttctctctcatactcacattactttttactttatctctctattgctttgattttcgt 13143349  T
Q  322 gcaaatacctattttttctttgtaaattatagttgtc 358  Q
    ||||||||  | |||||||||||||||||| ||||||    
T  13143348 gcaaatacaaactttttctttgtaaattatggttgtc 13143312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 230 - 349
Target Start/End: Original strand, 24842371 - 24842499
Alignment:
Q  230 aaatgatatttgaacattcatc-aatgacaatttttgtgacaattttctctctcatactcacat--------ctttatcactctattgctttggtttttg 320  Q
    |||||||||||||||||||||  |||||||| ||||||||||  ||||||||||||||||||||        ||||||| |||||||  ||||||||  |    
T  24842371 aaatgatatttgaacattcatttaatgacaacttttgtgacagctttctctctcatactcacattatttttactttatctctctatttttttggtttccg 24842470  T
Q  321 tgcaaatacctattttttctttgtaaatt 349  Q
    |||||||||||| |||||| || ||||||    
T  24842471 tgcaaatacctactttttccttataaatt 24842499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 293 - 363
Target Start/End: Complemental strand, 14693247 - 14693177
Alignment:
Q  293 ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattatagttgtctcata 363  Q
    ||||||| |||| ||||||||||||  ||||||||||||| ||||||||||||||||||| ||||| ||||    
T  14693247 ctttatctctctgttgctttggtttccgtgcaaatacctactttttctttgtaaattatatttgtcacata 14693177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 261 - 363
Target Start/End: Complemental strand, 5028302 - 5028191
Alignment:
Q  261 ttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattat 351  Q
    ||||||||||| ||||||||| ||||||||||         ||||||| || ||||||||||||||| ||| ||||| ||| ||||||||| ||||||||    
T  5028302 ttttgtgacaactttctctcttatactcacattactttttactttatctctttattgctttggttttcgtgtaaatatctactttttctttataaattat 5028203  T
Q  352 agttgtctcata 363  Q
     |||||||||||    
T  5028202 ggttgtctcata 5028191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 293 - 351
Target Start/End: Complemental strand, 868947 - 868889
Alignment:
Q  293 ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattat 351  Q
    ||||||| |||||||| |||||||||||| ||||||| || ||||||||||||||||||    
T  868947 ctttatctctctattgatttggtttttgtacaaatacttactttttctttgtaaattat 868889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 230 - 292
Target Start/End: Complemental strand, 5570401 - 5570339
Alignment:
Q  230 aaatgatatttgaacattcatcaatgacaatttttgtgacaattttctctctcatactcacat 292  Q
    ||||||||||||||||  |||   | |||||||||||||||||||||||||||||||||||||    
T  5570401 aaatgatatttgaacaaccattttttacaatttttgtgacaattttctctctcatactcacat 5570339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 293 - 355
Target Start/End: Original strand, 8747245 - 8747307
Alignment:
Q  293 ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattatagtt 355  Q
    ||||||| ||||||||||||| ||||||||||||||| |||| |||||||  |||||||||||    
T  8747245 ctttatctctctattgctttgatttttgtgcaaatacttattctttctttacaaattatagtt 8747307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 230 - 358
Target Start/End: Original strand, 33421763 - 33421900
Alignment:
Q  230 aaatgatatttgaacattcatcaa-tgacaatttttgtgacaattttctctctcatactcacatc---------tttatcactctattgctttggttttt 319  Q
    ||||||||||||||||| |||    |||||| |||||| |||| ||||||| |||||||||||||         |||||| ||||||||||||| ||||     
T  33421763 aaatgatatttgaacatccattttgtgacaacttttgttacaactttctctttcatactcacatcattttttactttatctctctattgctttgattttc 33421862  T
Q  320 gtgcaaatacctattttttctttgtaaattatagttgtc 358  Q
    |||||| ||||||||||||||||| ||||| ||||||||    
T  33421863 gtgcaa-tacctattttttctttgcaaattttagttgtc 33421900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 226 - 332
Target Start/End: Complemental strand, 5522710 - 5522595
Alignment:
Q  226 tgaaaaatgatatttgaacattcatc-aatgacaatttttgtgacaattttctctctcatactcacat----ctt----tatcactctattgctttggtt 316  Q
    ||||||||||||||||||||||||||   ||| |||||||||||||| ||| ||||||||| ||||||    |||    | || ||||||||||||||||    
T  5522710 tgaaaaatgatatttgaacattcatcttttgataatttttgtgacaactttatctctcatattcacattatacttttactttctctctattgctttggtt 5522611  T
Q  317 tttgtgcaaataccta 332  Q
    ||||||| ||||||||    
T  5522610 tttgtgctaataccta 5522595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 225 - 358
Target Start/End: Original strand, 23628358 - 23628502
Alignment:
Q  225 atgaaaaatgatatttgaacattcatc-aatgacaatttttgtgacaattttctctctcatactcacat--------ctttatcactctattgctttggt 315  Q
    |||| |||||||||||||| || |||  ||||| |||||||||||||||||||| ||||||||||| ||        ||||||| |||||||  ||||||    
T  23628358 atgagaaatgatatttgaatatccatttaatgataatttttgtgacaattttctatctcatactcatattatttttactttatctctctattattttggt 23628457  T
Q  316 ttttgtgcaaataccta--ttttttctttgtaaattatagttgtc 358  Q
    ||  ||||||||| |||  |||||||||| |||||||| ||||||    
T  23628458 ttccgtgcaaatatctactttttttctttataaattatggttgtc 23628502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 230 - 292
Target Start/End: Complemental strand, 2242090 - 2242027
Alignment:
Q  230 aaatgatatttgaacattcatcaat-gacaatttttgtgacaattttctctctcatactcacat 292  Q
    |||||||||||||||| ||||   | ||||||||||||||||| ||||||||||||||||||||    
T  2242090 aaatgatatttgaacaatcattttttgacaatttttgtgacaactttctctctcatactcacat 2242027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 230 - 351
Target Start/End: Complemental strand, 11547597 - 11547466
Alignment:
Q  230 aaatgatatttgaacattcatc-aatgacaatttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttggttttt 319  Q
    |||| |||||||||||| |||  |||||||| |||||  |||||||||||||||||||||||||         ||||||| |||||||||| ||||||      
T  11547597 aaataatatttgaacatccatttaatgacaacttttgcaacaattttctctctcatactcacattattttttactttatctctctattgctatggtttcc 11547498  T
Q  320 gtgcaaatacctattttttctttgtaaattat 351  Q
    |||  ||||||  |||||||||||||||||||    
T  11547497 gtgtcaataccacttttttctttgtaaattat 11547466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 293 - 360
Target Start/End: Original strand, 31749441 - 31749508
Alignment:
Q  293 ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattatagttgtctc 360  Q
    ||||||| |||||||| |||  |||| ||| ||||| |||||||||||||||||||||| ||||||||    
T  31749441 ctttatctctctattgttttaattttcgtgtaaatatctattttttctttgtaaattatggttgtctc 31749508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 253 - 292
Target Start/End: Complemental strand, 34442107 - 34442068
Alignment:
Q  253 atgacaatttttgtgacaattttctctctcatactcacat 292  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  34442107 atgacaacttttgtgacaattttctctctcatactcacat 34442068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 304 - 358
Target Start/End: Complemental strand, 6531164 - 6531110
Alignment:
Q  304 tattgctttggtttttgtgcaaatacctattttttctttgtaaattatagttgtc 358  Q
    |||||||||| |||| |||||||||| || |||||||||||||||||| ||||||    
T  6531164 tattgctttgattttcgtgcaaatacatactttttctttgtaaattatggttgtc 6531110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 227 - 292
Target Start/End: Complemental strand, 30152601 - 30152535
Alignment:
Q  227 gaaaaatgatatttgaacattca-tcaatgacaatttttgtgacaattttctctctcatactcacat 292  Q
    ||||||||||||||||||||||| | | |||||| |||||  |||| ||||||||||||||||||||    
T  30152601 gaaaaatgatatttgaacattcatttagtgacaacttttgcaacaactttctctctcatactcacat 30152535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 292
Target Start/End: Original strand, 13422998 - 13423034
Alignment:
Q  256 acaatttttgtgacaattttctctctcatactcacat 292  Q
    |||||||||||||||| ||||||||||||||||||||    
T  13422998 acaatttttgtgacaactttctctctcatactcacat 13423034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 292
Target Start/End: Complemental strand, 25811912 - 25811844
Alignment:
Q  224 aatgaaaaatgatatttgaacattcatcaatgacaatttttgtgacaattttctctctcatactcacat 292  Q
    ||||| ||||||||||||||||  |||   | |||| ||||||||||| ||||||||||||||||||||    
T  25811912 aatgagaaatgatatttgaacaaccattttttacaacttttgtgacaactttctctctcatactcacat 25811844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 347
Target Start/End: Original strand, 34047385 - 34047516
Alignment:
Q  225 atgaaaaatgatatttgaacattcatcaatgacaatttttgtgacaattttctctctcatactcac---atct-------ttatcactctattgctttgg 314  Q
    |||| ||||||||||||||||  |||   | |||| ||||||||||| ||||||||||||||||||   ||||       ||||| ||||||||||||||    
T  34047385 atgagaaatgatatttgaacaaccattttttacaacttttgtgacaactttctctctcatactcacattatctttttatcttatctctctattgctttgg 34047484  T
Q  315 tttttgtgcaaatacctattttttctttgtaaa 347  Q
    ||||||||| |||| ||  ||||||||||||||    
T  34047485 tttttgtgccaatatct-ctttttctttgtaaa 34047516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 230 - 292
Target Start/End: Original strand, 3198963 - 3199026
Alignment:
Q  230 aaatgatatttgaacattcatcaa-tgacaatttttgtgacaattttctctctcatactcacat 292  Q
    |||||||||||||||||||||    ||| ||||||| |||||| ||||||||||||||||||||    
T  3198963 aaatgatatttgaacattcatttggtgataatttttatgacaactttctctctcatactcacat 3199026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 254 - 292
Target Start/End: Original strand, 8645336 - 8645374
Alignment:
Q  254 tgacaatttttgtgacaattttctctctcatactcacat 292  Q
    |||||| ||||||||||| ||||||||||||||||||||    
T  8645336 tgacaacttttgtgacaactttctctctcatactcacat 8645374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 256 - 290
Target Start/End: Original strand, 14817961 - 14817995
Alignment:
Q  256 acaatttttgtgacaattttctctctcatactcac 290  Q
    |||||||||||||||| ||||||||||||||||||    
T  14817961 acaatttttgtgacaactttctctctcatactcac 14817995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 258 - 292
Target Start/End: Original strand, 28630130 - 28630164
Alignment:
Q  258 aatttttgtgacaattttctctctcatactcacat 292  Q
    |||||||||||||| ||||||||||||||||||||    
T  28630130 aatttttgtgacaactttctctctcatactcacat 28630164  T

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Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 301 - 351
Target Start/End: Complemental strand, 28944966 - 28944916
Alignment:
Q  301 ctctattgctttggtttttgtgcaaatacctattttttctttgtaaattat 351  Q
    ||||||||||||| |||| || ||||||||||||||||||||  |||||||    
T  28944966 ctctattgctttgattttcgtacaaatacctattttttctttacaaattat 28944916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 293 - 363
Target Start/End: Original strand, 32046774 - 32046844
Alignment:
Q  293 ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattatagttgtctcata 363  Q
    ||||||| ||||||||  |||| ||||||||||||| | | ||||||||| |||||||| |||||| ||||    
T  32046774 ctttatctctctattgtgttggattttgtgcaaataacaactttttctttataaattatggttgtcccata 32046844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 292
Target Start/End: Complemental strand, 11635609 - 11635540
Alignment:
Q  224 aatgaaaaatgatatttgaacattcatcaat-gacaatttttgtgacaattttctctctcatactcacat 292  Q
    ||||| |||||||||||||||| ||||   | ||||| ||||||||||| ||||||||||||| ||||||    
T  11635609 aatgagaaatgatatttgaacaatcattttttgacaacttttgtgacaactttctctctcatattcacat 11635540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 256 - 289
Target Start/End: Complemental strand, 33635942 - 33635909
Alignment:
Q  256 acaatttttgtgacaattttctctctcatactca 289  Q
    |||| |||||||||||||||||||||||||||||    
T  33635942 acaacttttgtgacaattttctctctcatactca 33635909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 306 - 358
Target Start/End: Complemental strand, 15318170 - 15318118
Alignment:
Q  306 ttgctttggtttttgtgcaaatacctattttttctttgtaaattatagttgtc 358  Q
    |||||| ||||||  |||| |||||||||||| ||||||||||||| ||||||    
T  15318170 ttgcttaggttttcatgcatatacctatttttcctttgtaaattatggttgtc 15318118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 258 - 290
Target Start/End: Original strand, 17182131 - 17182163
Alignment:
Q  258 aatttttgtgacaattttctctctcatactcac 290  Q
    |||||||||||||||||||||||||||| ||||    
T  17182131 aatttttgtgacaattttctctctcatattcac 17182163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 256 - 284
Target Start/End: Complemental strand, 25142592 - 25142564
Alignment:
Q  256 acaatttttgtgacaattttctctctcat 284  Q
    |||||||||||||||||||||||||||||    
T  25142592 acaatttttgtgacaattttctctctcat 25142564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 293 - 357
Target Start/End: Complemental strand, 28041809 - 28041745
Alignment:
Q  293 ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattatagttgt 357  Q
    ||||||| |||||||||||||| ||  |||||| ||| || ||||||||||||||| || |||||    
T  28041809 ctttatctctctattgctttggcttccgtgcaagtacttactttttctttgtaaatgatggttgt 28041745  T

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Target: chr5 (Bit Score: 63; Significance: 3e-27; HSPs: 56)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 230 - 358
Target Start/End: Complemental strand, 19840054 - 19839916
Alignment:
Q  230 aaatgatatttgaacattcatca-atgacaatttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttggttttt 319  Q
    |||||||||||||||||||||   ||||||||||||||||||| ||||||||||||||||||||         ||||||  ||||||||||||||||||     
T  19840054 aaatgatatttgaacattcattttatgacaatttttgtgacaactttctctctcatactcacattattttttactttatatctctattgctttggttttc 19839955  T
Q  320 gtgcaaatacctattttttctttgtaaattatagttgtc 358  Q
    ||||||||| | |||||||||||||||||||| ||||||    
T  19839954 gtgcaaatatcaattttttctttgtaaattatggttgtc 19839916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 227 - 368
Target Start/End: Original strand, 9581579 - 9581730
Alignment:
Q  227 gaaaaatgatatttgaacattcatcaa-tgacaatttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttggtt 316  Q
    |||||||||||||||||||| |||  | ||| || ||||||||||| ||||||| ||||||||||||         ||||||| |||||||| |||||||    
T  9581579 gaaaaatgatatttgaacatccatttagtgataacttttgtgacaactttctctttcatactcacattattttttactttatctctctattgttttggtt 9581678  T
Q  317 tttgtgcaaatacctattttttctttgtaaattatagttgtctcatagttgt 368  Q
    |  ||||||||||||| |||||||||||||||||| |||||| || ||||||    
T  9581679 tccgtgcaaatacctactttttctttgtaaattatggttgtcacaaagttgt 9581730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 294 - 357
Target Start/End: Complemental strand, 18397159 - 18397096
Alignment:
Q  294 tttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattatagttgt 357  Q
    |||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||    
T  18397159 tttatctctctattgctttggttttcgtgcaaatacctattttttctttgtaaattataattgt 18397096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 230 - 359
Target Start/End: Original strand, 34124624 - 34124763
Alignment:
Q  230 aaatgatatttgaacattcatca-atgacaatttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttggttttt 319  Q
    ||||||||||||||||| |||   |||| ||||||||||| |||||||||||||||||||||||         ||||||  ||||||||||||||||||     
T  34124624 aaatgatatttgaacatccattttatgataatttttgtgataattttctctctcatactcacattactttttactttatttctctattgctttggttttc 34124723  T
Q  320 gtgcaaatacctattttttctttgtaaattatagttgtct 359  Q
    ||| ||||||| | |||||||||||||||||| |||||||    
T  34124724 gtgtaaataccaactttttctttgtaaattatggttgtct 34124763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 230 - 358
Target Start/End: Complemental strand, 19481250 - 19481112
Alignment:
Q  230 aaatgatatttgaacattcatca-atgacaatttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttggttttt 319  Q
    ||||||||||||||||| |||   |||| || ||||||||||| ||||||||||||||||||||         ||||||| |||||||| |||||| ||     
T  19481250 aaatgatatttgaacatccattttatgataacttttgtgacaactttctctctcatactcacattactttttactttatctctctattgttttggtcttc 19481151  T
Q  320 gtgcaaatacctattttttctttgtaaattatagttgtc 358  Q
    ||||||||||| | |||||||||||||||||||||||||    
T  19481150 gtgcaaataccaactttttctttgtaaattatagttgtc 19481112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 256 - 357
Target Start/End: Complemental strand, 43214100 - 43213990
Alignment:
Q  256 acaatttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaa 346  Q
    |||| |||||||||||||||||| |||||||||||||         ||||||| || ||||| ||||||||| ||||||||||||||||||||||| |||    
T  43214100 acaacttttgtgacaattttctcactcatactcacattactttttactttatctctttattgttttggttttcgtgcaaatacctattttttctttataa 43214001  T
Q  347 attatagttgt 357  Q
    |||||||||||    
T  43214000 attatagttgt 43213990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 293 - 359
Target Start/End: Original strand, 43441814 - 43441880
Alignment:
Q  293 ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattatagttgtct 359  Q
    ||||||| |||||||||||||||||| ||||||||||| |||||||||||||||||||| |||||||    
T  43441814 ctttatctctctattgctttggttttcgtgcaaataccaattttttctttgtaaattatggttgtct 43441880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 261 - 363
Target Start/End: Complemental strand, 1839381 - 1839270
Alignment:
Q  261 ttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattat 351  Q
    ||||||||||| ||||||||||||||||||||         |||||||  ||||||| ||||||||| ||||||||| ||||||||||||||||||||||    
T  1839381 ttttgtgacaactttctctctcatactcacattattttttactttatctttctattgttttggttttcgtgcaaatatctattttttctttgtaaattat 1839282  T
Q  352 agttgtctcata 363  Q
     |||||| ||||    
T  1839281 ggttgtcccata 1839270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 224 - 340
Target Start/End: Original strand, 6517709 - 6517835
Alignment:
Q  224 aatgaaaaatgatatttgaacattcatca-atgacaatttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttg 313  Q
    ||||| ||||||||||||||||| |||   ||||||| ||||||||||| ||||||||||||||||||||         ||||||| |||||||||||||    
T  6517709 aatgagaaatgatatttgaacatccattttatgacaacttttgtgacaactttctctctcatactcacattactttttactttatctctctattgctttg 6517808  T
Q  314 gtttttgtgcaaatacctattttttct 340  Q
    ||||| ||||||||||| | |||||||    
T  6517809 gttttcgtgcaaataccaactttttct 6517835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 230 - 358
Target Start/End: Original strand, 10649438 - 10649576
Alignment:
Q  230 aaatgatatttgaacattcatca-atgacaatttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttggttttt 319  Q
    ||||||||||||||||| |||   ||||||| ||||||||||| ||||||| ||||||||||||         ||||||| ||||||||||||| ||||     
T  10649438 aaatgatatttgaacatccattttatgacaacttttgtgacaactttctctttcatactcacattactttttactttatctctctattgctttgattttc 10649537  T
Q  320 gtgcaaatacctattttttctttgtaaattatagttgtc 358  Q
    ||||| ||||| | |||||||||||||||||| ||||||    
T  10649538 gtgcacataccaactttttctttgtaaattatggttgtc 10649576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 215 - 292
Target Start/End: Original strand, 32912026 - 32912104
Alignment:
Q  215 gctaaatttaatgaaaaatgatatttgaacattcatca-atgacaatttttgtgacaattttctctctcatactcacat 292  Q
    |||| |||||| || |||||||||||||||||||||   |||| |||||||||||||||||||||||||||||||||||    
T  32912026 gctatatttaaagagaaatgatatttgaacattcattttatgataatttttgtgacaattttctctctcatactcacat 32912104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 262 - 361
Target Start/End: Original strand, 34270363 - 34270471
Alignment:
Q  262 tttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattata 352  Q
    ||||||||||||||||||||||||||| |||         ||||||| |||| |||| |||||||| ||||||||||||| |||| |||||||||||||     
T  34270363 tttgtgacaattttctctctcatactcccattattttttactttatctctctgttgcattggttttcgtgcaaatacctacttttcctttgtaaattatg 34270462  T
Q  353 gttgtctca 361  Q
    |||||||||    
T  34270463 gttgtctca 34270471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 230 - 351
Target Start/End: Complemental strand, 189771 - 189640
Alignment:
Q  230 aaatgatatttgaacattcatca-atgacaatttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttggttttt 319  Q
    ||||||||||||||||| |||   |||| || ||||||||||| ||||||||||||||||||||         ||||||| ||||||||||||||||||     
T  189771 aaatgatatttgaacatccattttatgataacttttgtgacaactttctctctcatactcacattactttttactttatctctctattgctttggttttc 189672  T
Q  320 gtgcaaatacctattttttctttgtaaattat 351  Q
    ||||||||| | | ||||||||| ||||||||    
T  189671 gtgcaaatatcaactttttctttataaattat 189640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 268 - 358
Target Start/End: Complemental strand, 8675462 - 8675363
Alignment:
Q  268 acaattttctctctcatactcacat---------ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattatagttgtc 358  Q
    |||||||||||||||||||||||||         ||||||| ||||||||||||| |||| ||||||||||| | |||||||||||||||||| ||||||    
T  8675462 acaattttctctctcatactcacattactttttactttatctctctattgctttgattttcgtgcaaataccaactttttctttgtaaattatggttgtc 8675363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 261 - 363
Target Start/End: Complemental strand, 41175742 - 41175631
Alignment:
Q  261 ttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattat 351  Q
    ||||||||||| ||||||||||||||||||||         ||||||| ||||||||||||| | || ||||||||||| | ||||||||||||||||||    
T  41175742 ttttgtgacaactttctctctcatactcacattattttttactttatctctctattgctttgatcttcgtgcaaatacccactttttctttgtaaattat 41175643  T
Q  352 agttgtctcata 363  Q
     |||||| ||||    
T  41175642 ggttgtcacata 41175631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 293 - 363
Target Start/End: Complemental strand, 15953040 - 15952970
Alignment:
Q  293 ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattatagttgtctcata 363  Q
    ||||||| ||||||||||||| |||| ||||||||||| | |||||||||||||||||| |||||| ||||    
T  15953040 ctttatctctctattgctttgattttcgtgcaaatacccactttttctttgtaaattatggttgtcacata 15952970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 254 - 351
Target Start/End: Original strand, 20770159 - 20770265
Alignment:
Q  254 tgacaatttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgt 344  Q
    |||||| ||||||||||| ||||||||||||||||||||         ||||||| ||||||||||||| |||| |||  |||||||| |||||||||||    
T  20770159 tgacaacttttgtgacaactttctctctcatactcacattattttttactttatctctctattgctttgattttcgtgtcaatacctactttttctttgt 20770258  T
Q  345 aaattat 351  Q
    |||||||    
T  20770259 aaattat 20770265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 294 - 358
Target Start/End: Original strand, 4771574 - 4771638
Alignment:
Q  294 tttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattatagttgtc 358  Q
    |||||| ||||||||||||| ||||||||||||||| |||| ||||||| |||||||| ||||||    
T  4771574 tttatctctctattgctttgatttttgtgcaaatacatattctttctttataaattatggttgtc 4771638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 255 - 357
Target Start/End: Complemental strand, 6446560 - 6446449
Alignment:
Q  255 gacaatttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgta 345  Q
    ||||| ||||||||||| ||||||||||||||||||||         ||||||  |||||||||||| ||||| || ||||||| |||||||| ||||||    
T  6446560 gacaacttttgtgacaactttctctctcatactcacattactttttactttatttctctattgcttttgttttcgtacaaatacatattttttttttgta 6446461  T
Q  346 aattatagttgt 357  Q
    |||||| |||||    
T  6446460 aattatggttgt 6446449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 230 - 292
Target Start/End: Complemental strand, 22649729 - 22649667
Alignment:
Q  230 aaatgatatttgaacattcatcaatgacaatttttgtgacaattttctctctcatactcacat 292  Q
    ||||||||||||||||  |||   | |||||||||||||||||||||||||||||||||||||    
T  22649729 aaatgatatttgaacaaccattttttacaatttttgtgacaattttctctctcatactcacat 22649667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 293 - 358
Target Start/End: Original strand, 30640866 - 30640931
Alignment:
Q  293 ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattatagttgtc 358  Q
    ||||||| ||||||||||||| |||| || |||||||||||| ||||||| |||||||| ||||||    
T  30640866 ctttatctctctattgctttgattttcgtacaaatacctattctttctttataaattatggttgtc 30640931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 254 - 358
Target Start/End: Complemental strand, 43196668 - 43196555
Alignment:
Q  254 tgacaatttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgt 344  Q
    ||||||||||||| |||| ||||| ||||||||||||||         ||||||| ||||||||||||| |||| |||||||||| |||| |||||||      
T  43196668 tgacaatttttgttacaactttctttctcatactcacattattttttactttatctctctattgctttgattttcgtgcaaatacgtattctttctttac 43196569  T
Q  345 aaattatagttgtc 358  Q
    ||||||| ||||||    
T  43196568 aaattatggttgtc 43196555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 258 - 349
Target Start/End: Complemental strand, 6940189 - 6940089
Alignment:
Q  258 aatttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaat 348  Q
    |||||||||||||| ||||||||||||||||||||         ||||||| ||||||||||||| |||| |||| || ||||| |||| ||||||||||    
T  6940189 aatttttgtgacaactttctctctcatactcacatatgtttttactttatctctctattgctttgattttcgtgccaaaacctacttttcctttgtaaat 6940090  T
Q  349 t 349  Q
    |    
T  6940089 t 6940089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 230 - 290
Target Start/End: Original strand, 18660762 - 18660822
Alignment:
Q  230 aaatgatatttgaacattcatcaatgacaatttttgtgacaattttctctctcatactcac 290  Q
    ||||||||||||||||  |||   |||||| ||||||||||||||||||||||||||||||    
T  18660762 aaatgatatttgaacaaccatttttgacaacttttgtgacaattttctctctcatactcac 18660822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 302 - 358
Target Start/End: Complemental strand, 38704183 - 38704127
Alignment:
Q  302 tctattgctttggtttttgtgcaaatacctattttttctttgtaaattatagttgtc 358  Q
    |||||||||||| |||| ||||||||||| | |||||||||||||||||| ||||||    
T  38704183 tctattgctttgattttcgtgcaaataccaactttttctttgtaaattatggttgtc 38704127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 230 - 289
Target Start/End: Complemental strand, 7076636 - 7076577
Alignment:
Q  230 aaatgatatttgaacattcatcaatgacaatttttgtgacaattttctctctcatactca 289  Q
    |||||||||||||||| ||||   | | ||||||||||||||||||||||||||||||||    
T  7076636 aaatgatatttgaacaatcattttttataatttttgtgacaattttctctctcatactca 7076577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 266 - 358
Target Start/End: Original strand, 9226341 - 9226441
Alignment:
Q  266 tgacaattttctctctcatactcacat--------ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattatagttgt 357  Q
    |||||| ||||||||||||||||||||        ||||||| |||||||| |||| |||  |||||||||| || ||||||||||||||||||| ||||    
T  9226341 tgacaactttctctctcatactcacattatttttactttatctctctattgttttgatttccgtgcaaatacttactttttctttgtaaattataattgt 9226440  T
Q  358 c 358  Q
    |    
T  9226441 c 9226441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 256 - 349
Target Start/End: Complemental strand, 9939473 - 9939371
Alignment:
Q  256 acaatttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaa 346  Q
    |||| ||||||||||||||||||||||||| ||||||         ||||||| ||||||||||||| |||| |||| || ||||| |||| ||||||||    
T  9939473 acaagttttgtgacaattttctctctcatattcacatatgtttttactttatctctctattgctttgattttcgtgccaaaacctacttttcctttgtaa 9939374  T
Q  347 att 349  Q
    |||    
T  9939373 att 9939371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 256 - 349
Target Start/End: Original strand, 18695348 - 18695450
Alignment:
Q  256 acaatttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaa 346  Q
    |||| ||||||||||| ||||||||||||||||||||         ||||||| ||||||||||||| |||| |||| || ||||| |||| ||||||||    
T  18695348 acaacttttgtgacaactttctctctcatactcacatatgtttttactttatctctctattgctttgattttcgtgctaaaacctacttttcctttgtaa 18695447  T
Q  347 att 349  Q
    |||    
T  18695448 att 18695450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 230 - 358
Target Start/End: Complemental strand, 18842389 - 18842251
Alignment:
Q  230 aaatgatatttgaacattcatcaa-tgacaatttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttggttttt 319  Q
    ||||||||||||||||| |||  | ||| || |||||  |||| ||||||||||||||||||||         ||||||| |||||||||| |||||||     
T  18842389 aaatgatatttgaacatccatttagtgataacttttgcaacaactttctctctcatactcacattattttttactttatctctctattgctatggttttc 18842290  T
Q  320 gtgcaaatacctattttttctttgtaaattatagttgtc 358  Q
    |||| ||||||  ||||||||||||||| ||| ||||||    
T  18842289 gtgccaataccacttttttctttgtaaaatatggttgtc 18842251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 258 - 292
Target Start/End: Original strand, 34379485 - 34379519
Alignment:
Q  258 aatttttgtgacaattttctctctcatactcacat 292  Q
    |||||||||||||||||||||||||||||||||||    
T  34379485 aatttttgtgacaattttctctctcatactcacat 34379519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 294 - 356
Target Start/End: Original strand, 43154137 - 43154199
Alignment:
Q  294 tttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattatagttg 356  Q
    |||||| ||||||||||||| |||| |||||||||| |||| |||||||| ||||||| ||||    
T  43154137 tttatctctctattgctttgattttcgtgcaaatacttattctttctttgcaaattatggttg 43154199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 293 - 350
Target Start/End: Complemental strand, 10659098 - 10659042
Alignment:
Q  293 ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaatta 350  Q
    ||||||| |||||||||||||||||| ||||||||| ||| ||||||||| |||||||    
T  10659098 ctttatctctctattgctttggttttcgtgcaaatatcta-tttttctttataaatta 10659042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 224 - 292
Target Start/End: Complemental strand, 21064300 - 21064231
Alignment:
Q  224 aatgaaaaatgatatttgaacattcatcaa-tgacaatttttgtgacaattttctctctcatactcacat 292  Q
    ||||| |||||||||||||||||||||  | |||||| |||||  |||| ||||||||||||||||||||    
T  21064300 aatgagaaatgatatttgaacattcatttagtgacaacttttgcaacaactttctctctcatactcacat 21064231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 230 - 293
Target Start/End: Original strand, 8920081 - 8920145
Alignment:
Q  230 aaatgatatttgaacattcatcaa-tgacaatttttgtgacaattttctctctcatactcacatc 293  Q
    ||||||||||||||||| |||    |||||| ||||||||||| |||||||||||||||||||||    
T  8920081 aaatgatatttgaacatccattttgtgacaacttttgtgacaactttctctctcatactcacatc 8920145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 357
Target Start/End: Original strand, 15478734 - 15478798
Alignment:
Q  293 ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattatagttgt 357  Q
    ||||||| ||| |||| ||||||||| ||||||||| | | |||||||||||||||||| |||||    
T  15478734 ctttatctctcaattgttttggttttcgtgcaaatatcaactttttctttgtaaattatggttgt 15478798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 253 - 293
Target Start/End: Original strand, 38363108 - 38363148
Alignment:
Q  253 atgacaatttttgtgacaattttctctctcatactcacatc 293  Q
    |||| ||||||||||| ||||||||||||||||||||||||    
T  38363108 atgataatttttgtgataattttctctctcatactcacatc 38363148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 225 - 292
Target Start/End: Original strand, 1764222 - 1764289
Alignment:
Q  225 atgaaaaatgatatttgaacattcatcaatgacaatttttgtgacaattttctctctcatactcacat 292  Q
    |||| |||||||||||||||| ||||   | |||| || |||||||| ||||||||||||||||||||    
T  1764222 atgagaaatgatatttgaacaatcattttttacaacttctgtgacaactttctctctcatactcacat 1764289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 261 - 363
Target Start/End: Complemental strand, 3640233 - 3640122
Alignment:
Q  261 ttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattat 351  Q
    ||||| ||||| ||||||||||||||||||||         |||||||  |||||||||||| ||||  |||||||||| | ||||||||| ||||||||    
T  3640233 ttttgagacaactttctctctcatactcacattattttttactttatctttctattgctttgattttcatgcaaatacccactttttctttataaattat 3640134  T
Q  352 agttgtctcata 363  Q
     |||||| ||||    
T  3640133 ggttgtcacata 3640122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 230 - 292
Target Start/End: Complemental strand, 8267888 - 8267825
Alignment:
Q  230 aaatgatatttgaacattcatcaa-tgacaatttttgtgacaattttctctctcatactcacat 292  Q
    ||||||||||||||||| |||  | ||||||||||||  |||| ||||||||||||||||||||    
T  8267888 aaatgatatttgaacatccatttagtgacaatttttgcaacaactttctctctcatactcacat 8267825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 254 - 292
Target Start/End: Original strand, 611892 - 611930
Alignment:
Q  254 tgacaatttttgtgacaattttctctctcatactcacat 292  Q
    |||||| ||||||||||| ||||||||||||||||||||    
T  611892 tgacaacttttgtgacaactttctctctcatactcacat 611930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 230 - 292
Target Start/End: Complemental strand, 1080020 - 1079958
Alignment:
Q  230 aaatgatatttgaacattcatcaatgacaatttttgtgacaattttctctctcatactcacat 292  Q
    |||||||||||||||| | ||   | |||||||||||||||| ||||||||||||| ||||||    
T  1080020 aaatgatatttgaacaattattttttacaatttttgtgacaactttctctctcatattcacat 1079958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 230 - 358
Target Start/End: Original strand, 6292124 - 6292262
Alignment:
Q  230 aaatgatatttgaacattcatcaa-tgacaatttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttggttttt 319  Q
    ||||||||||||||||||||||   ||| ||| ||||  |||| ||||||||| ||||||||||         ||||||| |||||||  |||| ||||     
T  6292124 aaatgatatttgaacattcatcttgtgataatatttgctacaactttctctcttatactcacattattttttactttatctctctattattttgattttc 6292223  T
Q  320 gtgcaaatacctattttttctttgtaaattatagttgtc 358  Q
    || |||||||||||| |||||||| ||||||| ||||||    
T  6292224 gtacaaatacctattatttctttgcaaattatggttgtc 6292262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 258 - 292
Target Start/End: Original strand, 11954463 - 11954497
Alignment:
Q  258 aatttttgtgacaattttctctctcatactcacat 292  Q
    |||||||||||||| ||||||||||||||||||||    
T  11954463 aatttttgtgacaactttctctctcatactcacat 11954497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 258 - 292
Target Start/End: Original strand, 14532536 - 14532570
Alignment:
Q  258 aatttttgtgacaattttctctctcatactcacat 292  Q
    |||||||||||||| ||||||||||||||||||||    
T  14532536 aatttttgtgacaactttctctctcatactcacat 14532570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 258 - 292
Target Start/End: Original strand, 40829446 - 40829480
Alignment:
Q  258 aatttttgtgacaattttctctctcatactcacat 292  Q
    |||||||||||||||||| ||||||||||||||||    
T  40829446 aatttttgtgacaattttttctctcatactcacat 40829480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 301 - 351
Target Start/End: Original strand, 41724273 - 41724323
Alignment:
Q  301 ctctattgctttggtttttgtgcaaatacctattttttctttgtaaattat 351  Q
    |||||||  ||||||||  ||| ||||||||||||||||||||||||||||    
T  41724273 ctctattattttggtttccgtgtaaatacctattttttctttgtaaattat 41724323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 293 - 358
Target Start/End: Complemental strand, 2688981 - 2688916
Alignment:
Q  293 ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattatagttgtc 358  Q
    ||||||| |||||||||| ||||||  |||| |||||   ||||||||||||||| ||||||||||    
T  2688981 ctttatctctctattgctatggtttccgtgccaatacaacttttttctttgtaaaatatagttgtc 2688916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 351
Target Start/End: Complemental strand, 15008544 - 15008487
Alignment:
Q  294 tttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattat 351  Q
    |||||| |||||||| ||||||||| ||||||||| ||| ||||  ||||||||||||    
T  15008544 tttatctctctattgttttggttttcgtgcaaatatctacttttcttttgtaaattat 15008487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 227 - 292
Target Start/End: Complemental strand, 19522074 - 19522009
Alignment:
Q  227 gaaaaatgatatttgaacattcatcaatgacaatttttgtgacaattttctctctcatactcacat 292  Q
    |||||||||||||||||||  |||   | |||| ||||||||||| ||||||| ||||||||||||    
T  19522074 gaaaaatgatatttgaacaaccattttttacaacttttgtgacaactttctctttcatactcacat 19522009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 312 - 357
Target Start/End: Complemental strand, 30004767 - 30004722
Alignment:
Q  312 tggtttttgtgcaaatacctattttttctttgtaaattatagttgt 357  Q
    ||||||| || || ||||||| ||||||||||||||||||||||||    
T  30004767 tggttttcgttcacatacctactttttctttgtaaattatagttgt 30004722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 256 - 292
Target Start/End: Complemental strand, 6758832 - 6758796
Alignment:
Q  256 acaatttttgtgacaattttctctctcatactcacat 292  Q
    |||||||||||||||| ||||||||| ||||||||||    
T  6758832 acaatttttgtgacaactttctctcttatactcacat 6758796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 256 - 292
Target Start/End: Complemental strand, 9168206 - 9168170
Alignment:
Q  256 acaatttttgtgacaattttctctctcatactcacat 292  Q
    |||| ||||||||||||||||||| ||||||||||||    
T  9168206 acaacttttgtgacaattttctctttcatactcacat 9168170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 256 - 292
Target Start/End: Original strand, 22098285 - 22098321
Alignment:
Q  256 acaatttttgtgacaattttctctctcatactcacat 292  Q
    |||| ||||||||||| ||||||||||||||||||||    
T  22098285 acaacttttgtgacaactttctctctcatactcacat 22098321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 256 - 292
Target Start/End: Complemental strand, 38293400 - 38293364
Alignment:
Q  256 acaatttttgtgacaattttctctctcatactcacat 292  Q
    |||||||||||||||| ||||||| ||||||||||||    
T  38293400 acaatttttgtgacaactttctctatcatactcacat 38293364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 256 - 292
Target Start/End: Original strand, 41321284 - 41321320
Alignment:
Q  256 acaatttttgtgacaattttctctctcatactcacat 292  Q
    |||||||||||||||| ||||| ||||||||||||||    
T  41321284 acaatttttgtgacaactttctttctcatactcacat 41321320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 62; Significance: 1e-26; HSPs: 71)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 230 - 358
Target Start/End: Complemental strand, 31844672 - 31844535
Alignment:
Q  230 aaatgatatttgaacattcatcaatgacaatttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttggtttttg 320  Q
    ||||||||||||||||| |||   ||||||||||| |||||||||||||| | ||||||||||         ||||||| |||||||| |||||||||||    
T  31844672 aaatgatatttgaacatccatttgtgacaatttttatgacaattttctcttttatactcacattattttttactttatctctctattgttttggtttttg 31844573  T
Q  321 tgcaaatacctattttttctttgtaaattatagttgtc 358  Q
    | |||||||||| |||||||||||||||||||||||||    
T  31844572 tacaaatacctactttttctttgtaaattatagttgtc 31844535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 230 - 359
Target Start/End: Complemental strand, 3343398 - 3343259
Alignment:
Q  230 aaatgatatttgaacattcatca-atgacaatttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttggttttt 319  Q
    |||||||||||||||||||||   ||||||||||||||||||||||||||||||||| ||||||         ||||||| ||||||||||||||||||     
T  3343398 aaatgatatttgaacattcattttatgacaatttttgtgacaattttctctctcatattcacattactttttactttatctctctattgctttggttttc 3343299  T
Q  320 gtgcaaatacctattttttctttgtaaattatagttgtct 359  Q
    |||||||| || | ||||||||| |||||||| |||||||    
T  3343298 gtgcaaatcccaactttttctttataaattatggttgtct 3343259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 255 - 357
Target Start/End: Complemental strand, 44184601 - 44184490
Alignment:
Q  255 gacaatttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgta 345  Q
    ||||| ||||||||||| ||||||||||||||||||||         ||||||| |||||||||||||||||| ||||||||||||||||||||||||||    
T  44184601 gacaacttttgtgacaactttctctctcatactcacattactttttactttatctctctattgctttggttttcgtgcaaatacctattttttctttgta 44184502  T
Q  346 aattatagttgt 357  Q
    |||||| |||||    
T  44184501 aattatggttgt 44184490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 254 - 363
Target Start/End: Complemental strand, 10055675 - 10055557
Alignment:
Q  254 tgacaatttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgt 344  Q
    |||||||||||||| ||||||||| ||||||||||||||         ||||||| ||||||||||||||||||||| |||||||| | |||||||||||    
T  10055675 tgacaatttttgtggcaattttctttctcatactcacattattttttactttatctctctattgctttggtttttgtacaaataccaactttttctttgt 10055576  T
Q  345 aaattatagttgtctcata 363  Q
    |||||||||||||| ||||    
T  10055575 aaattatagttgtcccata 10055557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 261 - 358
Target Start/End: Original strand, 3062365 - 3062471
Alignment:
Q  261 ttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattat 351  Q
    ||||||||||| ||||||||| ||||||||||         ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  3062365 ttttgtgacaactttctctcttatactcacattactttttactttatctctctattgttttggtttttgtgcaaatacctattttttctttgtaaattat 3062464  T
Q  352 agttgtc 358  Q
     ||||||    
T  3062465 ggttgtc 3062471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 226 - 358
Target Start/End: Original strand, 43482523 - 43482664
Alignment:
Q  226 tgaaaaatgatatttgaacattcatca-atgacaatttttgtgacaattttctctctcatactcacat--------ctttatcactctattgctttggtt 316  Q
    |||||||||||||||||| || |||   |||||||||||||||| || ||||| | ||||||||||||        ||||||| |||||||| |||||||    
T  43482523 tgaaaaatgatatttgaatatccattttatgacaatttttgtgataactttctttatcatactcacattatttttactttatctctctattgttttggtt 43482622  T
Q  317 tttgtgcaaatacctattttttctttgtaaattatagttgtc 358  Q
    || ||||||||||||| |||||||||| ||||||| ||||||    
T  43482623 ttcgtgcaaatacctactttttctttgaaaattatggttgtc 43482664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 293 - 361
Target Start/End: Complemental strand, 43573538 - 43573470
Alignment:
Q  293 ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattatagttgtctca 361  Q
    ||||||| |||||||||||||||||| ||||||||||| ||||||||||| |||||||| |||||||||    
T  43573538 ctttatctctctattgctttggttttcgtgcaaataccaattttttctttataaattatggttgtctca 43573470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 230 - 363
Target Start/End: Complemental strand, 33180778 - 33180635
Alignment:
Q  230 aaatgatatttgaacattcatcaa-tgacaatttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttggttttt 319  Q
    |||||||||||||||||||||    |||||| |||| |||||||||||||||||||||||||||         ||||||| |||||||| |||||||||     
T  33180778 aaatgatatttgaacattcattttgtgacaacttttatgacaattttctctctcatactcacattattttttactttatctctctattgttttggttttc 33180679  T
Q  320 gtgcaaatacctattttttctttgtaaattatagttgtctcata 363  Q
    |||||||||| || ||| ||||| ||||||||  ||||||||||    
T  33180678 gtgcaaatacataatttctctttataaattatcattgtctcata 33180635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 261 - 363
Target Start/End: Original strand, 7817672 - 7817782
Alignment:
Q  261 ttttgtgacaattttctctctcatactcacat--------ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattata 352  Q
    ||||||||||| ||||||||||||||||||||        ||||||| ||||||||||||| |||| ||||||||| | | ||||||||||||||||||     
T  7817672 ttttgtgacaactttctctctcatactcacattatttttactttatctctctattgctttgattttcgtgcaaatatccactttttctttgtaaattatg 7817771  T
Q  353 gttgtctcata 363  Q
    |||||| ||||    
T  7817772 gttgtcacata 7817782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 293 - 358
Target Start/End: Original strand, 13729802 - 13729867
Alignment:
Q  293 ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattatagttgtc 358  Q
    ||||||| ||||||||| |||||||| ||||||||||| |||||||||||||||||||| ||||||    
T  13729802 ctttatctctctattgcgttggttttcgtgcaaataccaattttttctttgtaaattatggttgtc 13729867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 293 - 358
Target Start/End: Original strand, 28036820 - 28036885
Alignment:
Q  293 ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattatagttgtc 358  Q
    ||||||| |||||||||||||||||| ||||||||||| | |||||||||||||||||| ||||||    
T  28036820 ctttatctctctattgctttggttttcgtgcaaataccaactttttctttgtaaattatggttgtc 28036885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 293 - 361
Target Start/End: Complemental strand, 35588886 - 35588818
Alignment:
Q  293 ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattatagttgtctca 361  Q
    ||||||| ||||||||||||| |||| ||||||||||| | ||||||||||||||||||| ||||||||    
T  35588886 ctttatctctctattgctttgattttcgtgcaaataccaactttttctttgtaaattataattgtctca 35588818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 261 - 358
Target Start/End: Complemental strand, 11353010 - 11352904
Alignment:
Q  261 ttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattat 351  Q
    ||||||||||| ||||||||||||||||||||         ||||||| || ||||||||||||||| ||| ||||||| | ||||||||||||||||||    
T  11353010 ttttgtgacaactttctctctcatactcacattactttttactttatctctttattgctttggttttcgtgtaaataccaaatttttctttgtaaattat 11352911  T
Q  352 agttgtc 358  Q
     ||||||    
T  11352910 ggttgtc 11352904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 230 - 358
Target Start/End: Original strand, 21559801 - 21559939
Alignment:
Q  230 aaatgatatttgaacattcat-caatgacaatttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttggttttt 319  Q
    ||||||||||||||||| ||| |  |||||| |||||  |||| ||| ||||||||||||||||         ||||||| ||||||||||||| ||||     
T  21559801 aaatgatatttgaacatccattctgtgacaacttttgctacaactttatctctcatactcacattattttttactttatctctctattgctttgattttc 21559900  T
Q  320 gtgcaaatacctattttttctttgtaaattatagttgtc 358  Q
    ||||||||||||||| |||||||  ||||||||||||||    
T  21559901 gtgcaaatacctattatttctttacaaattatagttgtc 21559939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 256 - 349
Target Start/End: Original strand, 46829509 - 46829611
Alignment:
Q  256 acaatttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaa 346  Q
    |||||||||||||||| ||||||||||||||||||||         ||||||| ||||||||||||| |||| |||| || ||||| |||||||||||||    
T  46829509 acaatttttgtgacaactttctctctcatactcacatatgtttttactttatctctctattgctttgattttcgtgccaaaacctactttttctttgtaa 46829608  T
Q  347 att 349  Q
    |||    
T  46829609 att 46829611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 293 - 358
Target Start/End: Original strand, 3293205 - 3293270
Alignment:
Q  293 ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattatagttgtc 358  Q
    ||||||| ||||||||||||| ||||  |||||||||||| ||||||||| |||||||||||||||    
T  3293205 ctttatctctctattgctttgattttcatgcaaatacctactttttctttataaattatagttgtc 3293270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 293 - 358
Target Start/End: Original strand, 20482603 - 20482668
Alignment:
Q  293 ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattatagttgtc 358  Q
    ||||||| |||||||| |||||||| ||| ||||||||||||||||| ||||||||||| ||||||    
T  20482603 ctttatctctctattgttttggtttatgtacaaatacctattttttccttgtaaattatggttgtc 20482668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 258 - 358
Target Start/End: Complemental strand, 35452612 - 35452503
Alignment:
Q  258 aatttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaat 348  Q
    |||||||||||||| ||||||||||||||||||||         ||||||| ||||||||||||| |||  ||||||||||||  ||||||||| |||||    
T  35452612 aatttttgtgacaactttctctctcatactcacataattttttactttatctctctattgctttgatttccgtgcaaataccttctttttctttataaat 35452513  T
Q  349 tatagttgtc 358  Q
    ||| ||||||    
T  35452512 tatggttgtc 35452503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 230 - 358
Target Start/End: Complemental strand, 34757536 - 34757401
Alignment:
Q  230 aaatgatatttgaacattcatc-aatgacaatttttgtgacaattttctctctcatactcacatctttatca------ctctattgctttggtttttgtg 322  Q
    ||||||||||||||||| |||| || ||||| ||||||||||| | ||||||||||||||| ||  || | |      |||||||| ||||||||  |||    
T  34757536 aaatgatatttgaacatccatctaacgacaacttttgtgacaactctctctctcatactcatattatttttaatttatctctattgttttggtttcagtg 34757437  T
Q  323 caaatacctattttttctttgtaaattatagttgtc 358  Q
    |||||||||| ||||||||| |||||||| ||||||    
T  34757436 caaatacctactttttctttataaattatggttgtc 34757401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 293 - 351
Target Start/End: Complemental strand, 34855580 - 34855521
Alignment:
Q  293 ctttatcactctattgctttggtttttgtgcaaataccta-ttttttctttgtaaattat 351  Q
    ||||||||||||||||||||| ||||| |||||||||||| |||||| ||||||||||||    
T  34855580 ctttatcactctattgctttgatttttatgcaaatacctacttttttttttgtaaattat 34855521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 253 - 358
Target Start/End: Original strand, 41458623 - 41458737
Alignment:
Q  253 atgacaatttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttggtttttgtgcaaatacctattttttctttg 343  Q
    ||||||||||||||  ||| ||||||||||||||||||||         ||||||  || ||||| |||| |||||||||||||||||| |||||||||     
T  41458623 atgacaatttttgtagcaactttctctctcatactcacattattttttactttatttctatattgttttgatttttgtgcaaatacctactttttcttta 41458722  T
Q  344 taaattatagttgtc 358  Q
    |||||||| ||||||    
T  41458723 taaattatggttgtc 41458737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 230 - 358
Target Start/End: Original strand, 41893918 - 41894056
Alignment:
Q  230 aaatgatatttgaacattcatca-atgacaatttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttggttttt 319  Q
    ||||||||||||||||| |||   ||||||| ||||||||||| ||||||| ||||||||||||         ||||||| |||| ||| |||||||||     
T  41893918 aaatgatatttgaacatccattttatgacaacttttgtgacaactttctctttcatactcacattactttttactttatctctctgttgttttggttttc 41894017  T
Q  320 gtgcaaatacctattttttctttgtaaattatagttgtc 358  Q
    ||||| ||||| | |||| ||||||||||||| ||||||    
T  41894018 gtgcatataccaacttttcctttgtaaattatggttgtc 41894056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 293 - 358
Target Start/End: Original strand, 11564969 - 11565033
Alignment:
Q  293 ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattatagttgtc 358  Q
    ||||||| ||||||||||||| |||| |||||| ||||||||||||||||| ||||||| ||||||    
T  11564969 ctttatctctctattgctttgattttcgtgcaa-tacctattttttctttgcaaattatggttgtc 11565033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 230 - 361
Target Start/End: Original strand, 16980300 - 16980440
Alignment:
Q  230 aaatgatatttgaacattcatcaa-tgacaatttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttggttttt 319  Q
    |||||||||||||||||||||    |||||| |||||  |||| ||||||||| ||||||||||         ||||||| |||||| |||||||||||     
T  16980300 aaatgatatttgaacattcattttgtgacaacttttgcaacaactttctctcttatactcacattactttttactttatctctctat-gctttggttttc 16980398  T
Q  320 gtgcaaatacctattttttctttgtaaattatagttgtctca 361  Q
    | ||||||||| ||||||||||||||||||||  ||||||||    
T  16980399 gggcaaataccaattttttctttgtaaattatgattgtctca 16980440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 258 - 348
Target Start/End: Complemental strand, 18111651 - 18111551
Alignment:
Q  258 aatttttgtgacaattttctctctcatactcacat----------ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaa 347  Q
    |||||||||||||||||||||||||||||||||||          ||||||| ||||||| ||||| ||||  ||| ||| |||||||||||||||||||    
T  18111651 aatttttgtgacaattttctctctcatactcacattatatttttactttatctctctattactttgattttcttgccaatgcctattttttctttgtaaa 18111552  T
Q  348 t 348  Q
    |    
T  18111551 t 18111551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 254 - 358
Target Start/End: Original strand, 32815196 - 32815309
Alignment:
Q  254 tgacaatttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgt 344  Q
    ||||||||||||  |||||||| ||||||||||||||||         ||||||| |||||||||| |||||| ||||| ||||||  ||||||||||||    
T  32815196 tgacaatttttgcaacaattttttctctcatactcacattattttttactttatctctctattgctatggtttctgtgccaataccacttttttctttgt 32815295  T
Q  345 aaattatagttgtc 358  Q
    ||| ||| ||||||    
T  32815296 aaaatatggttgtc 32815309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 224 - 292
Target Start/End: Original strand, 34978293 - 34978362
Alignment:
Q  224 aatgaaaaatgatatttgaacattca-tcaatgacaatttttgtgacaattttctctctcatactcacat 292  Q
    ||||| |||||||||||||||| ||| |   |||||||||||||||||| ||||||||||||||||||||    
T  34978293 aatgagaaatgatatttgaacaatcactttttgacaatttttgtgacaactttctctctcatactcacat 34978362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 293 - 358
Target Start/End: Complemental strand, 41399158 - 41399093
Alignment:
Q  293 ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattatagttgtc 358  Q
    ||||||| |||||||| ||||||||| ||| |||||| ||||||||||||||||||| | ||||||    
T  41399158 ctttatctctctattgttttggttttcgtgtaaatacttattttttctttgtaaattttggttgtc 41399093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 293 - 361
Target Start/End: Complemental strand, 12645905 - 12645837
Alignment:
Q  293 ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattatagttgtctca 361  Q
    ||||||| ||||||||||||| |||| ||||||||| | | |||||||||||||||||| ||| |||||    
T  12645905 ctttatctctctattgctttgattttcgtgcaaatatcaactttttctttgtaaattatggttatctca 12645837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 293 - 357
Target Start/End: Complemental strand, 21822594 - 21822530
Alignment:
Q  293 ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattatagttgt 357  Q
    ||||||| ||||||| ||||| |||| ||| ||||||| |||||||||||||||||||| |||||    
T  21822594 ctttatctctctattactttgattttcgtgtaaataccaattttttctttgtaaattatggttgt 21822530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 230 - 289
Target Start/End: Complemental strand, 46773710 - 46773650
Alignment:
Q  230 aaatgatatttgaacattcat-caatgacaatttttgtgacaattttctctctcatactca 289  Q
    ||||||||||||||||| ||| || ||||||||||||  ||||||||||||||||||||||    
T  46773710 aaatgatatttgaacatccattcagtgacaatttttgcaacaattttctctctcatactca 46773650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 230 - 292
Target Start/End: Original strand, 13152596 - 13152658
Alignment:
Q  230 aaatgatatttgaacattcatcaatgacaatttttgtgacaattttctctctcatactcacat 292  Q
    ||||||||||||||||  |||   |||||| ||||||||||| ||||||||||||||||||||    
T  13152596 aaatgatatttgaacaaccatttttgacaacttttgtgacaactttctctctcatactcacat 13152658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 230 - 358
Target Start/End: Complemental strand, 19786147 - 19786009
Alignment:
Q  230 aaatgatatttgaacattcatcaa-tgacaatttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttggttttt 319  Q
    ||||||||||||||||| |||  | |||||| |||||  |||| |||||||| |||||||||||         ||||||| |||||||||| |||||||     
T  19786147 aaatgatatttgaacatccatttagtgacaacttttgcaacaactttctctcacatactcacattactttttactttatctctctattgctctggttttc 19786048  T
Q  320 gtgcaaatacctattttttctttgtaaattatagttgtc 358  Q
    |||| ||||||  ||||||||||||||| ||| ||||||    
T  19786047 gtgccaataccacttttttctttgtaaaatatggttgtc 19786009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 293 - 351
Target Start/End: Original strand, 25067299 - 25067357
Alignment:
Q  293 ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattat 351  Q
    ||||||| |||||||| |||||||||  ||||||||| | |||||||||||||||||||    
T  25067299 ctttatctctctattgttttggttttcatgcaaatacattttttttctttgtaaattat 25067357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 293 - 363
Target Start/End: Original strand, 42926215 - 42926285
Alignment:
Q  293 ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattatagttgtctcata 363  Q
    ||||||| |||||||| |||| ||| ||| ||||||| || |||||||||||||||||| |||||| ||||    
T  42926215 ctttatctctctattgttttgatttctgtacaaatacttactttttctttgtaaattatggttgtcacata 42926285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 293 - 351
Target Start/End: Complemental strand, 46812900 - 46812842
Alignment:
Q  293 ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattat 351  Q
    ||||||| |||||||| |||| |||||||||||||||||||| |||||||  |||||||    
T  46812900 ctttatctctctattgttttgatttttgtgcaaatacctattctttctttacaaattat 46812842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 301 - 358
Target Start/End: Original strand, 44304007 - 44304064
Alignment:
Q  301 ctctattgctttggtttttgtgcaaatacctattttttctttgtaaattatagttgtc 358  Q
    |||||||| |||| |||| || ||||||| |||||||||| |||||||||||||||||    
T  44304007 ctctattgttttgattttcgtacaaatacttattttttctctgtaaattatagttgtc 44304064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 292
Target Start/End: Original strand, 6269396 - 6269432
Alignment:
Q  256 acaatttttgtgacaattttctctctcatactcacat 292  Q
    |||||||||||||||| ||||||||||||||||||||    
T  6269396 acaatttttgtgacaactttctctctcatactcacat 6269432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 294 - 358
Target Start/End: Original strand, 16708237 - 16708301
Alignment:
Q  294 tttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattatagttgtc 358  Q
    |||||| |||||||| |||| |||||||||||||| ||||| |||||||  ||||||| ||||||    
T  16708237 tttatctctctattgttttgatttttgtgcaaatatctattctttctttacaaattatggttgtc 16708301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 294 - 358
Target Start/End: Original strand, 17682473 - 17682537
Alignment:
Q  294 tttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattatagttgtc 358  Q
    |||||| |||||||| |||| |||||||||||||| ||||| |||||||  ||||||| ||||||    
T  17682473 tttatctctctattgttttgatttttgtgcaaatatctattctttctttacaaattatggttgtc 17682537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 292
Target Start/End: Complemental strand, 34108896 - 34108860
Alignment:
Q  256 acaatttttgtgacaattttctctctcatactcacat 292  Q
    |||| ||||||||||||||||||||||||||||||||    
T  34108896 acaacttttgtgacaattttctctctcatactcacat 34108860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 230 - 293
Target Start/End: Complemental strand, 35586841 - 35586777
Alignment:
Q  230 aaatgatatttgaacattcatca-atgacaatttttgtgacaattttctctctcatactcacatc 293  Q
    ||||||||||||||||| |||   |||| || ||||||||||| |||||||||||||||||||||    
T  35586841 aaatgatatttgaacatccattttatgataacttttgtgacaactttctctctcatactcacatc 35586777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 230 - 293
Target Start/End: Complemental strand, 37899281 - 37899217
Alignment:
Q  230 aaatgatatttgaacattcatcaa-tgacaatttttgtgacaattttctctctcatactcacatc 293  Q
    ||||||||||||||||| |||    |||||||||||||||||| ||||||||||||||| |||||    
T  37899281 aaatgatatttgaacatccattttgtgacaatttttgtgacaactttctctctcatacttacatc 37899217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 358
Target Start/End: Original strand, 39331982 - 39332126
Alignment:
Q  224 aatgaaaaatgatatttgaacattca-tcaatgacaatttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttg 313  Q
    ||||| ||||||||||||||||| || | | |||||| |||||| |||| ||||||||| ||||||||||         ||||||| |||||||||| ||    
T  39331982 aatgagaaatgatatttgaacatccatttagtgacaacttttgtaacaactttctctcttatactcacattactttttactttatctctctattgctatg 39332081  T
Q  314 gtttttgtgcaaatacctattttttctttgtaaattatagttgtc 358  Q
     |||  |||| ||||||  ||||||||||||||| ||| ||||||    
T  39332082 atttccgtgccaataccacttttttctttgtaaaatatggttgtc 39332126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 292
Target Start/End: Complemental strand, 40854696 - 40854660
Alignment:
Q  256 acaatttttgtgacaattttctctctcatactcacat 292  Q
    |||| ||||||||||||||||||||||||||||||||    
T  40854696 acaacttttgtgacaattttctctctcatactcacat 40854660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 292
Target Start/End: Complemental strand, 44496844 - 44496808
Alignment:
Q  256 acaatttttgtgacaattttctctctcatactcacat 292  Q
    |||||||||||||||| ||||||||||||||||||||    
T  44496844 acaatttttgtgacaactttctctctcatactcacat 44496808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 254 - 285
Target Start/End: Original strand, 30061309 - 30061340
Alignment:
Q  254 tgacaatttttgtgacaattttctctctcata 285  Q
    ||||||||||||||||||||||||||||||||    
T  30061309 tgacaatttttgtgacaattttctctctcata 30061340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 230 - 292
Target Start/End: Complemental strand, 37808832 - 37808769
Alignment:
Q  230 aaatgatatttgaacattcatcaa-tgacaatttttgtgacaattttctctctcatactcacat 292  Q
    ||||||||||||||||| |||  | ||||||||||||  |||||||||||||||||||| ||||    
T  37808832 aaatgatatttgaacatccatttagtgacaatttttgcaacaattttctctctcatacttacat 37808769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 293 - 352
Target Start/End: Original strand, 47495046 - 47495105
Alignment:
Q  293 ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattata 352  Q
    ||||||| |||||||| |||  ||| ||||||||||||||| |||| |||||||||||||    
T  47495046 ctttatctctctattgttttaatttctgtgcaaatacctatcttttatttgtaaattata 47495105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 256 - 349
Target Start/End: Complemental strand, 1471332 - 1471230
Alignment:
Q  256 acaatttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaa 346  Q
    |||| ||||||||||| ||||||||||||||||||||         ||||||| ||||||||||||| |||| |||| || | ||| || ||||||||||    
T  1471332 acaacttttgtgacaactttctctctcatactcacatatgtttttactttatctctctattgctttgattttcgtgccaaaatctacttcttctttgtaa 1471233  T
Q  347 att 349  Q
    |||    
T  1471232 att 1471230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 293 - 363
Target Start/End: Original strand, 4713649 - 4713719
Alignment:
Q  293 ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattatagttgtctcata 363  Q
    ||||||| ||||||||  |||||||   |||||||||||  |||||||||||||||||| |||||| ||||    
T  4713649 ctttatctctctattgtgttggtttccatgcaaataccttatttttctttgtaaattatggttgtcacata 4713719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 254 - 292
Target Start/End: Complemental strand, 12007229 - 12007191
Alignment:
Q  254 tgacaatttttgtgacaattttctctctcatactcacat 292  Q
    |||||| ||||||||||| ||||||||||||||||||||    
T  12007229 tgacaacttttgtgacaactttctctctcatactcacat 12007191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 258 - 292
Target Start/End: Complemental strand, 24532982 - 24532948
Alignment:
Q  258 aatttttgtgacaattttctctctcatactcacat 292  Q
    |||||||||||||||||| ||||||||||||||||    
T  24532982 aatttttgtgacaattttttctctcatactcacat 24532948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 258 - 292
Target Start/End: Complemental strand, 29723966 - 29723932
Alignment:
Q  258 aatttttgtgacaattttctctctcatactcacat 292  Q
    |||||||||||||| ||||||||||||||||||||    
T  29723966 aatttttgtgacaactttctctctcatactcacat 29723932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 230 - 292
Target Start/End: Original strand, 30941389 - 30941451
Alignment:
Q  230 aaatgatatttgaacattcatcaatgacaatttttgtgacaattttctctctcatactcacat 292  Q
    ||||||||||||||||  |||   | |||| ||||||||||| ||||||||||||||||||||    
T  30941389 aaatgatatttgaacaaccattttttacaacttttgtgacaactttctctctcatactcacat 30941451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 254 - 292
Target Start/End: Complemental strand, 31675099 - 31675061
Alignment:
Q  254 tgacaatttttgtgacaattttctctctcatactcacat 292  Q
    |||||| |||||||||||||||| |||||||||||||||    
T  31675099 tgacaacttttgtgacaattttcactctcatactcacat 31675061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 267 - 358
Target Start/End: Original strand, 36019458 - 36019557
Alignment:
Q  267 gacaattttctctctcatactcacat--------ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattatagttgtc 358  Q
    ||||| ||||||||||||||||||||        ||||||| || ||||||| |||||| ||||  ||||||||  ||||||||||||||||| ||||||    
T  36019458 gacaactttctctctcatactcacattatttttactttatctctatattgctatggtttctgtgtcaatacctaccttttctttgtaaattatggttgtc 36019557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 293 - 359
Target Start/End: Complemental strand, 37666835 - 37666769
Alignment:
Q  293 ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattatagttgtct 359  Q
    ||||||| || |||||||||| |||| ||| |||||  |||||||| |||||||||||| |||||||    
T  37666835 ctttatctctttattgctttgattttcgtgtaaatatatattttttatttgtaaattatggttgtct 37666769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 254 - 292
Target Start/End: Complemental strand, 43807856 - 43807818
Alignment:
Q  254 tgacaatttttgtgacaattttctctctcatactcacat 292  Q
    ||||||||||| |||||||||| ||||||||||||||||    
T  43807856 tgacaatttttatgacaattttttctctcatactcacat 43807818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 258 - 292
Target Start/End: Complemental strand, 47145112 - 47145078
Alignment:
Q  258 aatttttgtgacaattttctctctcatactcacat 292  Q
    |||||||||||||||||||||||||| ||||||||    
T  47145112 aatttttgtgacaattttctctctcacactcacat 47145078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 254 - 292
Target Start/End: Original strand, 47448854 - 47448892
Alignment:
Q  254 tgacaatttttgtgacaattttctctctcatactcacat 292  Q
    |||||| ||||||||||| ||||||||||||||||||||    
T  47448854 tgacaacttttgtgacaactttctctctcatactcacat 47448892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 293 - 358
Target Start/End: Complemental strand, 8920662 - 8920597
Alignment:
Q  293 ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattatagttgtc 358  Q
    ||||||| |||||||| |||| |||  |||||||||||||  |||||||| |||||||| ||||||    
T  8920662 ctttatctctctattgttttgatttccgtgcaaatacctacgttttctttataaattatggttgtc 8920597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 293 - 358
Target Start/End: Original strand, 13162995 - 13163060
Alignment:
Q  293 ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattatagttgtc 358  Q
    ||||||| |||||||||| ||||||  |||| ||||||  ||||||||||||||| ||| ||||||    
T  13162995 ctttatctctctattgctatggtttccgtgccaataccacttttttctttgtaaaatatggttgtc 13163060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 256 - 293
Target Start/End: Original strand, 21204359 - 21204396
Alignment:
Q  256 acaatttttgtgacaattttctctctcatactcacatc 293  Q
    |||| ||||||||||| |||||||||||||||||||||    
T  21204359 acaacttttgtgacaactttctctctcatactcacatc 21204396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 301 - 358
Target Start/End: Complemental strand, 40623894 - 40623837
Alignment:
Q  301 ctctattgctttggtttttgtgcaaatacctattttttctttgtaaattatagttgtc 358  Q
    |||||||||||| ||||  |||||| |||||||| ||| |||||||||||| ||||||    
T  40623894 ctctattgcttttgtttccgtgcaactacctattgtttttttgtaaattatggttgtc 40623837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 256 - 292
Target Start/End: Complemental strand, 5174593 - 5174557
Alignment:
Q  256 acaatttttgtgacaattttctctctcatactcacat 292  Q
    |||||||||||||||| ||||||||| ||||||||||    
T  5174593 acaatttttgtgacaactttctctcttatactcacat 5174557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 258 - 286
Target Start/End: Complemental strand, 8904446 - 8904418
Alignment:
Q  258 aatttttgtgacaattttctctctcatac 286  Q
    |||||||||||||||||||||||||||||    
T  8904446 aatttttgtgacaattttctctctcatac 8904418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 301 - 357
Target Start/End: Complemental strand, 23048386 - 23048331
Alignment:
Q  301 ctctattgctttggtttttgtgcaaatacctattttttctttgtaaattatagttgt 357  Q
    |||||||| |||||||||  ||||||||| || |||||||||||||||||| |||||    
T  23048386 ctctattgttttggttttcatgcaaatac-tactttttctttgtaaattatggttgt 23048331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 261 - 293
Target Start/End: Original strand, 33224858 - 33224890
Alignment:
Q  261 ttttgtgacaattttctctctcatactcacatc 293  Q
    ||||||||||| |||||||||||||||||||||    
T  33224858 ttttgtgacaactttctctctcatactcacatc 33224890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 256 - 292
Target Start/End: Original strand, 42584832 - 42584868
Alignment:
Q  256 acaatttttgtgacaattttctctctcatactcacat 292  Q
    |||| ||||||||||| ||||||||||||||||||||    
T  42584832 acaacttttgtgacaactttctctctcatactcacat 42584868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 295 - 351
Target Start/End: Original strand, 47500686 - 47500742
Alignment:
Q  295 ttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattat 351  Q
    ||||| |||||||| ||| ||||| ||| |||||  |||||||||||||||||||||    
T  47500686 ttatctctctattgttttagttttcgtgtaaataaatattttttctttgtaaattat 47500742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 60; Significance: 2e-25; HSPs: 71)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 255 - 357
Target Start/End: Complemental strand, 41159931 - 41159820
Alignment:
Q  255 gacaatttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgta 345  Q
    ||||| ||||||||||| ||||||||||||||||||||         ||||||| |||||||||||||||||| ||||||||||||||||||||||||||    
T  41159931 gacaacttttgtgacaactttctctctcatactcacattattttttactttatctctctattgctttggttttcgtgcaaatacctattttttctttgta 41159832  T
Q  346 aattatagttgt 357  Q
    |||||| |||||    
T  41159831 aattatggttgt 41159820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 230 - 361
Target Start/End: Original strand, 31596951 - 31597092
Alignment:
Q  230 aaatgatatttgaacattcatca-atgacaatttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttggttttt 319  Q
    ||||||||||||||||| |||   ||||||||||||||||||| | ||||||||||||||||||         ||||||| |||||||| ||||||||||    
T  31596951 aaatgatatttgaacatccattttatgacaatttttgtgacaactctctctctcatactcacattactttttactttatctctctattgttttggttttt 31597050  T
Q  320 gtgcaaatacctattttttctttgtaaattatagttgtctca 361  Q
    ||||||||||| | ||||||||||||||||||  ||||||||    
T  31597051 gtgcaaataccaactttttctttgtaaattatgattgtctca 31597092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 230 - 358
Target Start/End: Original strand, 9208069 - 9208205
Alignment:
Q  230 aaatgatatttgaacattcatc-aatgacaatttttgtgacaattttctctctcatactcacatc-------tttatcactctattgctttggtttttgt 321  Q
    ||||||||||||||||| |||  |||||||||||||||||||| ||  ||||||||||||||||        |||||| |||||||| ||||||||  ||    
T  9208069 aaatgatatttgaacatccatttaatgacaatttttgtgacaacttcatctctcatactcacattatttttatttatctctctattgttttggtttacgt 9208168  T
Q  322 gcaaatacctattttttctttgtaaattatagttgtc 358  Q
    ||||||||||| ||||||||| || ||||||||||||    
T  9208169 gcaaatacctactttttctttatatattatagttgtc 9208205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 227 - 359
Target Start/End: Complemental strand, 9549270 - 9549128
Alignment:
Q  227 gaaaaatgatatttgaacattcatcaa-tgacaatttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttggtt 316  Q
    |||||||||||||||||||| |||    |||||| ||||||||||||||||||||||||||||||||         ||||||| ||||||||| ||| ||    
T  9549270 gaaaaatgatatttgaacatccattttgtgacaacttttgtgacaattttctctctcatactcacattattttttactttatctctctattgcattgatt 9549171  T
Q  317 tttgtgcaaatacctattttttctttgtaaattatagttgtct 359  Q
    |||||  |||||| ||||||| ||||||||||||| |||||||    
T  9549170 tttgtttaaatacatatttttcctttgtaaattatggttgtct 9549128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 254 - 358
Target Start/End: Complemental strand, 6991851 - 6991738
Alignment:
Q  254 tgacaatttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgt 344  Q
    ||||||||||||||| |||||||||||||||||||||||         ||||||| |||| ||||||||||||||||||| ||| ||| |||||||||||    
T  6991851 tgacaatttttgtgataattttctctctcatactcacattattttttactttatctctcttttgctttggtttttgtgcatataactactttttctttgt 6991752  T
Q  345 aaattatagttgtc 358  Q
    ||| ||| ||||||    
T  6991751 aaaatatggttgtc 6991738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 261 - 363
Target Start/End: Complemental strand, 30439542 - 30439431
Alignment:
Q  261 ttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattat 351  Q
    ||||||||||| ||||||||||||||||||||         ||||||| ||||||||||||| |||| ||||||||||  ||||||||||||||||||||    
T  30439542 ttttgtgacaactttctctctcatactcacattattttttactttatctctctattgctttgattttcgtgcaaatactcattttttctttgtaaattat 30439443  T
Q  352 agttgtctcata 363  Q
     |||||| ||||    
T  30439442 ggttgtcacata 30439431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 230 - 351
Target Start/End: Original strand, 41600312 - 41600441
Alignment:
Q  230 aaatgatatttgaacattcatcaat-gacaatttttgtgacaattttctctctcatactcacat-------ctttatcactctattgctttggtttttgt 321  Q
    |||||||||||||||||||||  || ||||| ||||||||||| ||||||||||||||||||||       ||||||| |||||||||||||||||  ||    
T  41600312 aaatgatatttgaacattcatttattgacaacttttgtgacaactttctctctcatactcacatcattttgctttatctctctattgctttggtttccgt 41600411  T
Q  322 gcaaatacctattttttctttgtaaattat 351  Q
    |||||||  || ||| |||||| |||||||    
T  41600412 gcaaatatgtactttatctttgcaaattat 41600441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 230 - 358
Target Start/End: Complemental strand, 45529314 - 45529176
Alignment:
Q  230 aaatgatatttgaacattcatcaa-tgacaatttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttggttttt 319  Q
    |||||||||||||||||||||  | ||||||||||||| |||| ||||||||||||||||||||         ||||||| |||||||||| ||||||      
T  45529314 aaatgatatttgaacattcatttagtgacaatttttgtaacaactttctctctcatactcacattattttttactttatctctctattgctatggtttcc 45529215  T
Q  320 gtgcaaatacctattttttctttgtaaattatagttgtc 358  Q
    |||| ||||||  ||||||||||||||| ||| ||||||    
T  45529214 gtgccaataccacttttttctttgtaaaatatggttgtc 45529176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 225 - 358
Target Start/End: Original strand, 34718113 - 34718256
Alignment:
Q  225 atgaaaaatgatatttgaacattcatcaa-tgacaatttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttgg 314  Q
    |||| ||||||||||||||||| |||    |||||| |||||| |||| ||||||||||||||||||||         ||||||| |||||||||||||     
T  34718113 atgagaaatgatatttgaacatccattttgtgacaacttttgttacaactttctctctcatactcacattattttttactttatctctctattgctttga 34718212  T
Q  315 tttttgtgcaaatacctattttttctttgtaaattatagttgtc 358  Q
    ||||||| |||||||||||| |||||||  ||||||| ||||||    
T  34718213 tttttgtacaaatacctattctttctttacaaattatggttgtc 34718256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 293 - 363
Target Start/End: Complemental strand, 23793085 - 23793015
Alignment:
Q  293 ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattatagttgtctcata 363  Q
    |||||||  |||||||| |||| ||||||||||||| | ||| ||||||||||||||||||||||||||||    
T  23793085 ctttatctttctattgcgttggattttgtgcaaataacaattctttctttgtaaattatagttgtctcata 23793015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 294 - 351
Target Start/End: Complemental strand, 29028955 - 29028898
Alignment:
Q  294 tttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattat 351  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||||  |||||||    
T  29028955 tttatctctctattgctttgatttttgtgcaaatacctattttttctttacaaattat 29028898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 254 - 358
Target Start/End: Original strand, 34018836 - 34018949
Alignment:
Q  254 tgacaatttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgt 344  Q
    |||||| |||||  |||||||||||||||||||||||||         |||||||||||||||| ||||| ||| |||||| |||| | |||||||||||    
T  34018836 tgacaacttttgcaacaattttctctctcatactcacattactttttactttatcactctattgttttgggtttcgtgcaattaccaactttttctttgt 34018935  T
Q  345 aaattatagttgtc 358  Q
    ||||||| ||||||    
T  34018936 aaattatggttgtc 34018949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 294 - 363
Target Start/End: Original strand, 41541934 - 41542003
Alignment:
Q  294 tttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattatagttgtctcata 363  Q
    |||||| ||||||||| ||||||||||||||||||| |||||||| ||| |||||||| |||||| ||||    
T  41541934 tttatctctctattgcattggtttttgtgcaaatacttattttttatttataaattatggttgtcccata 41542003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 220 - 358
Target Start/End: Complemental strand, 1633968 - 1633820
Alignment:
Q  220 atttaatgaaaaatgatatttgaacattcatcaa-tgacaatttttgtgacaattttctctctcatactcacat---------ctttatcactctattgc 309  Q
    ||||| ||| ||||||||||||||||| |||  | |||||| |||||  |||| ||||||||||||||||||||         ||||||| |||||||||    
T  1633968 atttattgagaaatgatatttgaacatccatttagtgacaacttttgcaacaactttctctctcatactcacattattttttactttatctctctattgc 1633869  T
Q  310 tttggtttttgtgcaaatacctattttttctttgtaaattatagttgtc 358  Q
    | |||||| ||||| ||||||  ||||||||||||||| ||| ||||||    
T  1633868 tatggtttctgtgccaataccacttttttctttgtaaagtatggttgtc 1633820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 230 - 340
Target Start/End: Complemental strand, 4658331 - 4658211
Alignment:
Q  230 aaatgatatttgaacattcatca-atgacaatttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttggttttt 319  Q
    ||||||||||||||||| |||   ||||||| ||||||||||| ||| ||||||||||| ||||         ||||||| |||||||||||||||||||    
T  4658331 aaatgatatttgaacatccattttatgacaacttttgtgacaactttttctctcatacttacattactttttactttatctctctattgctttggttttt 4658232  T
Q  320 gtgcaaatacctattttttct 340  Q
    ||||||||||| | |||||||    
T  4658231 gtgcaaataccaactttttct 4658211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 230 - 351
Target Start/End: Original strand, 5864206 - 5864327
Alignment:
Q  230 aaatgatatttgaacattcatcaa-tgacaatttttgtgacaattttctctctcatactcaca-tctttatcactctattgctttggtttttgtgcaaat 327  Q
    |||||||||||||||||||||| | ||| ||||||||| |||||||||||||||||| ||||| | ||| | ||| |||  ||||| |||  ||||||||    
T  5864206 aaatgatatttgaacattcatctagtgataatttttgtaacaattttctctctcataatcacattattttttactttat--ctttgttttccgtgcaaat 5864303  T
Q  328 acctattttttctttgtaaattat 351  Q
    |||||  |||||||| ||||||||    
T  5864304 acctaccttttctttataaattat 5864327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 230 - 358
Target Start/End: Original strand, 12783769 - 12783906
Alignment:
Q  230 aaatgatatttgaacattcatc-aatgacaatttttgtgacaattttctctctcatactcacat--------ctttatcactctattgctttggtttttg 320  Q
    ||||||||||||||||| |||  |||||||||||||||||||| ||| |||||  || ||||||        ||||||| |||||||| ||||||||  |    
T  12783769 aaatgatatttgaacatccatttaatgacaatttttgtgacaactttatctcttttattcacattatttttactttatctctctattgttttggtttccg 12783868  T
Q  321 tgcaaatacctattttttctttgtaaattatagttgtc 358  Q
    | |||||||||||||||||||| ||||||  |||||||    
T  12783869 tacaaatacctattttttctttataaattccagttgtc 12783906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 255 - 357
Target Start/End: Complemental strand, 16327194 - 16327082
Alignment:
Q  255 gacaatttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttggtttttgtgcaaatac-ctattttttctttgt 344  Q
    ||||| ||||| ||||| ||||||||||||||||||||         ||||||| |||||||  |||||||||  ||||||||| |||||||||||||||    
T  16327194 gacaacttttgcgacaactttctctctcatactcacattactttttactttatctctctattattttggttttcttgcaaatacactattttttctttgt 16327095  T
Q  345 aaattatagttgt 357  Q
    |||||||||||||    
T  16327094 aaattatagttgt 16327082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 261 - 351
Target Start/End: Complemental strand, 7473062 - 7472964
Alignment:
Q  261 ttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattat 351  Q
    ||||||| ||| ||||||||||||||||||||         ||||||| |||||||||||| ||||| |||||||||||||| |||||||||||||||||    
T  7473062 ttttgtgtcaactttctctctcatactcacattactttttactttatctctctattgctttagttttcgtgcaaatacctat-ttttctttgtaaattat 7472964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 293 - 351
Target Start/End: Original strand, 16613710 - 16613768
Alignment:
Q  293 ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattat 351  Q
    ||||||| ||||||||||||| |||||||||||||||||||| |||||||  |||||||    
T  16613710 ctttatctctctattgctttgatttttgtgcaaatacctattctttctttacaaattat 16613768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 293 - 355
Target Start/End: Complemental strand, 35031492 - 35031430
Alignment:
Q  293 ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattatagtt 355  Q
    ||||||| ||||||||||||| |||  ||||||||| ||| ||||||||||||||||||||||    
T  35031492 ctttatctctctattgctttgatttccgtgcaaatatctactttttctttgtaaattatagtt 35031430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 293 - 351
Target Start/End: Complemental strand, 39543518 - 39543460
Alignment:
Q  293 ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattat 351  Q
    ||||||| ||||||||||||| |||  |||||||||| |||||||||||||||||||||    
T  39543518 ctttatctctctattgctttgttttccgtgcaaatacttattttttctttgtaaattat 39543460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 230 - 347
Target Start/End: Original strand, 8645168 - 8645294
Alignment:
Q  230 aaatgatatttgaacattcatcaa-tgacaatttttgtgacaattttctctctcatactcacatc--------tttatcactctattgctttggtttttg 320  Q
    ||||||||||||||||| |||    ||| |||||||| ||||||||||||||||||||||| |||        |||||| |||||||| ||||||||       
T  8645168 aaatgatatttgaacatccatttggtgataatttttgggacaattttctctctcatactcatatcatttttactttatctctctattgttttggtttcca 8645267  T
Q  321 tgcaaatacctattttttctttgtaaa 347  Q
    ||||||||| |||||||||||||||||    
T  8645268 tgcaaatacttattttttctttgtaaa 8645294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 293 - 358
Target Start/End: Complemental strand, 16872151 - 16872086
Alignment:
Q  293 ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattatagttgtc 358  Q
    ||||||| ||||||||||||| |||| ||||||||| | | |||||||||||||||||| ||||||    
T  16872151 ctttatctctctattgctttgattttcgtgcaaatatcaactttttctttgtaaattatggttgtc 16872086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 293 - 358
Target Start/End: Complemental strand, 36424597 - 36424532
Alignment:
Q  293 ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattatagttgtc 358  Q
    ||||||| |||||||| ||||||||  |||||||||| |||||||||||| |||||||| ||||||    
T  36424597 ctttatctctctattgttttggtttccgtgcaaatacatattttttctttataaattatggttgtc 36424532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 227 - 292
Target Start/End: Original strand, 44825443 - 44825508
Alignment:
Q  227 gaaaaatgatatttgaacattcatcaatgacaatttttgtgacaattttctctctcatactcacat 292  Q
    ||||||||||| ||||||| ||||   |||||| ||||||||||||||| ||||||||||||||||    
T  44825443 gaaaaatgataattgaacaatcatttttgacaacttttgtgacaattttatctctcatactcacat 44825508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 230 - 363
Target Start/End: Original strand, 12707152 - 12707296
Alignment:
Q  230 aaatgatatttgaacattcatca-atgacaatttttgtgacaattttctctctcatactcacatc---------tttatcactctattgctttggttttt 319  Q
    ||||||||||||||||| |||   ||||||| ||||| ||||| |||||||||||||||||| |          |||||| |||||||| |||||||||     
T  12707152 aaatgatatttgaacatccattttatgacaacttttgcgacaactttctctctcatactcacgttactttttaatttatctctctattgttttggttttc 12707251  T
Q  320 gtgcaaataccta-ttttttctttgtaaattatagttgtctcata 363  Q
    ||| ||||||| | ||||||||||||||||||| |||||| ||||    
T  12707252 gtgtaaataccaacttttttctttgtaaattatggttgtcccata 12707296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 230 - 358
Target Start/End: Original strand, 16966788 - 16966926
Alignment:
Q  230 aaatgatatttgaacattcatcaa-tgacaatttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttggttttt 319  Q
    ||||||||||||||||| |||  | |||||| |||||  |||| ||||||||||||||||||||         ||||||| |||||||||| ||||||      
T  16966788 aaatgatatttgaacatccatttagtgacaacttttgcaacaactttctctctcatactcacattattttctactttatctctctattgctatggtttcc 16966887  T
Q  320 gtgcaaatacctattttttctttgtaaattatagttgtc 358  Q
    |||| ||||||  ||||||||||||||| ||| ||||||    
T  16966888 gtgccaataccacttttttctttgtaaagtatggttgtc 16966926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 230 - 358
Target Start/End: Original strand, 29991415 - 29991552
Alignment:
Q  230 aaatgatatttgaacattcatcaa-tgacaatttttgtgacaattttctctctcatactcacatc---------tttatcactctattgctttggttttt 319  Q
    ||||||||||||||||| |||    |||||| |||||| |||| ||||||| |||||||||||||         |||||| ||||||||||||| ||||     
T  29991415 aaatgatatttgaacatccattttgtgacaacttttgttacaactttctctttcatactcacatcattttttactttatctctctattgctttgattttc 29991514  T
Q  320 gtgcaaatacctattttttctttgtaaattatagttgtc 358  Q
    |||||| ||||||||||||||||| ||||| | ||||||    
T  29991515 gtgcaa-tacctattttttctttgcaaattttggttgtc 29991552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 293 - 363
Target Start/End: Complemental strand, 36885483 - 36885413
Alignment:
Q  293 ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattatagttgtctcata 363  Q
    ||||||| || |||||||||| |||| |||  |||||||| |||||||||||||||||| |||||| ||||    
T  36885483 ctttatctctttattgctttgattttcgtgtcaatacctactttttctttgtaaattatggttgtcccata 36885413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 261 - 351
Target Start/End: Original strand, 2733023 - 2733121
Alignment:
Q  261 ttttgtgacaattttctctctcatactcacat--------ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattat 351  Q
    ||||||||||| ||| ||||||||||||||||        ||||||| |||||||  ||||||||  ||||||||||||| ||||||||| ||||||||    
T  2733023 ttttgtgacaactttttctctcatactcacattatttttactttatctctctattattttggtttccgtgcaaatacctactttttctttataaattat 2733121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 294 - 351
Target Start/End: Complemental strand, 5277698 - 5277641
Alignment:
Q  294 tttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattat 351  Q
    |||||| ||||||||||||| |||| |||||||||| |||| |||||||| |||||||    
T  5277698 tttatctctctattgctttgattttcgtgcaaatacatattctttctttgcaaattat 5277641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 256 - 293
Target Start/End: Original strand, 18651400 - 18651437
Alignment:
Q  256 acaatttttgtgacaattttctctctcatactcacatc 293  Q
    |||| |||||||||||||||||||||||||||||||||    
T  18651400 acaacttttgtgacaattttctctctcatactcacatc 18651437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 301 - 358
Target Start/End: Original strand, 20174768 - 20174825
Alignment:
Q  301 ctctattgctttggtttttgtgcaaatacctattttttctttgtaaattatagttgtc 358  Q
    |||||||| |||| |||| || ||||||| |||||||||| |||||||||||||||||    
T  20174768 ctctattgttttgattttcgtacaaatacttattttttctctgtaaattatagttgtc 20174825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 301 - 358
Target Start/End: Original strand, 20219495 - 20219552
Alignment:
Q  301 ctctattgctttggtttttgtgcaaatacctattttttctttgtaaattatagttgtc 358  Q
    |||||||| |||| |||| || ||||||| |||||||||| |||||||||||||||||    
T  20219495 ctctattgttttgattttcgtacaaatacttattttttctctgtaaattatagttgtc 20219552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 230 - 293
Target Start/End: Original strand, 3946243 - 3946307
Alignment:
Q  230 aaatgatatttgaacattcatcaa-tgacaatttttgtgacaattttctctctcatactcacatc 293  Q
    ||||||||||||||||| |||    |||||| ||||||||||| |||||||||||||||||||||    
T  3946243 aaatgatatttgaacatccattttgtgacaacttttgtgacaactttctctctcatactcacatc 3946307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 294 - 358
Target Start/End: Complemental strand, 7375772 - 7375709
Alignment:
Q  294 tttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattatagttgtc 358  Q
    |||||| ||||||||||||| |||| |||||| ||||||||||||||||| ||||| | ||||||    
T  7375772 tttatctctctattgctttgattttcgtgcaa-tacctattttttctttgcaaattttggttgtc 7375709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 253 - 289
Target Start/End: Complemental strand, 12735056 - 12735020
Alignment:
Q  253 atgacaatttttgtgacaattttctctctcatactca 289  Q
    ||||||| |||||||||||||||||||||||||||||    
T  12735056 atgacaacttttgtgacaattttctctctcatactca 12735020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 230 - 331
Target Start/End: Original strand, 22719443 - 22719554
Alignment:
Q  230 aaatgatatttgaacattcatcaatgacaatttttgtgacaattttctctctcatactcacat----------ctttatcactctattgctttggttttt 319  Q
    ||||||||||||||||  |||   | |||| |||||||||||||||||||||||| |||||||          |||| || |||||||||||||||||||    
T  22719443 aaatgatatttgaacaaccattttttacaacttttgtgacaattttctctctcatgctcacattatctttttactttctctctctattgctttggttttt 22719542  T
Q  320 gtgcaaatacct 331  Q
    |||||| |||||    
T  22719543 gtgcaactacct 22719554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 230 - 292
Target Start/End: Original strand, 11017808 - 11017871
Alignment:
Q  230 aaatgatatttgaacattcatc-aatgacaatttttgtgacaattttctctctcatactcacat 292  Q
    ||||||||||||||||| |||  |||||||| |||||  |||| ||||||||||||||||||||    
T  11017808 aaatgatatttgaacatccatttaatgacaacttttgcaacaactttctctctcatactcacat 11017871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 293 - 363
Target Start/End: Original strand, 36568034 - 36568107
Alignment:
Q  293 ctttatcactctattgctttgg---tttttgtgcaaatacctattttttctttgtaaattatagttgtctcata 363  Q
    ||||||| ||||||||||||||   ||||||| |||||||||| ||||| | |||||||||| |||||| ||||    
T  36568034 ctttatctctctattgctttggttttttttgtacaaatacctactttttttgtgtaaattatggttgtcccata 36568107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 254 - 292
Target Start/End: Complemental strand, 5601030 - 5600992
Alignment:
Q  254 tgacaatttttgtgacaattttctctctcatactcacat 292  Q
    |||||| ||||||||||||||| ||||||||||||||||    
T  5601030 tgacaacttttgtgacaattttttctctcatactcacat 5600992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 254 - 292
Target Start/End: Original strand, 5639590 - 5639628
Alignment:
Q  254 tgacaatttttgtgacaattttctctctcatactcacat 292  Q
    |||||| ||||||||||||||| ||||||||||||||||    
T  5639590 tgacaacttttgtgacaattttttctctcatactcacat 5639628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 262 - 292
Target Start/End: Original strand, 7678767 - 7678797
Alignment:
Q  262 tttgtgacaattttctctctcatactcacat 292  Q
    |||||||||||||||||||||||||||||||    
T  7678767 tttgtgacaattttctctctcatactcacat 7678797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 293 - 351
Target Start/End: Complemental strand, 8497664 - 8497606
Alignment:
Q  293 ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattat 351  Q
    ||||||| ||||||||||||   ||| || |||||| ||||||||||||||||||||||    
T  8497664 ctttatctctctattgctttaaatttcgtacaaatatctattttttctttgtaaattat 8497606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 230 - 292
Target Start/End: Original strand, 10692442 - 10692504
Alignment:
Q  230 aaatgatatttgaacattcatcaatgacaatttttgtgacaattttctctctcatactcacat 292  Q
    |||||||||||||||| ||||   | | |||||||||||||| ||| ||||||||||||||||    
T  10692442 aaatgatatttgaacaatcattttttataatttttgtgacaactttatctctcatactcacat 10692504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 293 - 363
Target Start/End: Complemental strand, 14707338 - 14707268
Alignment:
Q  293 ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattatagttgtctcata 363  Q
    ||||||| | ||||||||||| ||||  ||  |||||||| ||||||||||||||||||  ||||||||||    
T  14707338 ctttatctccctattgctttgattttcttgtcaatacctactttttctttgtaaattatgattgtctcata 14707268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 230 - 292
Target Start/End: Original strand, 27325761 - 27325823
Alignment:
Q  230 aaatgatatttgaacattcatcaatgacaatttttgtgacaattttctctctcatactcacat 292  Q
    ||||||||||||||||  |||   | |||| ||||||||||| ||||||||||||||||||||    
T  27325761 aaatgatatttgaacaaccattttttacaacttttgtgacaactttctctctcatactcacat 27325823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 293 - 351
Target Start/End: Original strand, 28646748 - 28646806
Alignment:
Q  293 ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattat 351  Q
    ||||||| |||| ||||||||||||| || |||||| ||| ||||||||| ||||||||    
T  28646748 ctttatctctctgttgctttggttttcgtacaaatatctactttttctttataaattat 28646806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 293 - 351
Target Start/End: Original strand, 28651332 - 28651390
Alignment:
Q  293 ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattat 351  Q
    ||||||| |||| ||||||||||||| || |||||| ||| ||||||||| ||||||||    
T  28651332 ctttatctctctgttgctttggttttcgtacaaatatctactttttctttataaattat 28651390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 258 - 292
Target Start/End: Original strand, 28756567 - 28756601
Alignment:
Q  258 aatttttgtgacaattttctctctcatactcacat 292  Q
    |||||||||||||||||| ||||||||||||||||    
T  28756567 aatttttgtgacaattttatctctcatactcacat 28756601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 230 - 292
Target Start/End: Complemental strand, 31249592 - 31249530
Alignment:
Q  230 aaatgatatttgaacattcatcaatgacaatttttgtgacaattttctctctcatactcacat 292  Q
    ||||||||||||||||  |||   | |||| ||||||||||||||| ||||||||||||||||    
T  31249592 aaatgatatttgaacaaccattttttacaacttttgtgacaattttttctctcatactcacat 31249530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 230 - 292
Target Start/End: Complemental strand, 32501264 - 32501202
Alignment:
Q  230 aaatgatatttgaacattcatcaatgacaatttttgtgacaattttctctctcatactcacat 292  Q
    |||||||||||||||| ||||   | |||| |||| | |||||||||||||||||||||||||    
T  32501264 aaatgatatttgaacaatcattttttacaacttttttaacaattttctctctcatactcacat 32501202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 254 - 292
Target Start/End: Complemental strand, 33451606 - 33451568
Alignment:
Q  254 tgacaatttttgtgacaattttctctctcatactcacat 292  Q
    |||||| ||||||||||| ||||||||||||||||||||    
T  33451606 tgacaacttttgtgacaactttctctctcatactcacat 33451568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 254 - 292
Target Start/End: Complemental strand, 34435780 - 34435742
Alignment:
Q  254 tgacaatttttgtgacaattttctctctcatactcacat 292  Q
    |||||| |||||||||||||||||||||||||| |||||    
T  34435780 tgacaacttttgtgacaattttctctctcatacacacat 34435742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 230 - 358
Target Start/End: Original strand, 36110141 - 36110279
Alignment:
Q  230 aaatgatatttgaacattcatcaa-tgacaatttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttggttttt 319  Q
    ||||||||||||||||| |||  | ||| || |||||  |||||||||||| ||||||||||||         ||||||| |||||||| | |||||||     
T  36110141 aaatgatatttgaacatccatttagtgaaaacttttgcaacaattttctctttcatactcacattactttttactttatctctctattgttatggttttc 36110240  T
Q  320 gtgcaaatacctattttttctttgtaaattatagttgtc 358  Q
    |||| ||||||  ||||||||||||||| ||| ||||||    
T  36110241 gtgccaataccacttttttctttgtaaaatatggttgtc 36110279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 301 - 359
Target Start/End: Original strand, 37597322 - 37597380
Alignment:
Q  301 ctctattgctttggtttttgtgcaaatacctattttttctttgtaaattatagttgtct 359  Q
    ||||||||||||| |||| ||| |||| ||||  ||||||||||||||||| |||||||    
T  37597322 ctctattgctttgattttcgtgtaaatccctaccttttctttgtaaattatggttgtct 37597380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 293 - 363
Target Start/End: Complemental strand, 38708290 - 38708220
Alignment:
Q  293 ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattatagttgtctcata 363  Q
    ||||||| ||| |||| |||| |||  ||||||||| |||||||||||||| ||||||| |||||| ||||    
T  38708290 ctttatctctccattgttttgatttccgtgcaaatatctattttttctttgcaaattatggttgtcacata 38708220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 254 - 292
Target Start/End: Original strand, 39359764 - 39359801
Alignment:
Q  254 tgacaatttttgtgacaattttctctctcatactcacat 292  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  39359764 tgacaatttttg-gacaattttctctctcatactcacat 39359801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 358
Target Start/End: Complemental strand, 888251 - 888186
Alignment:
Q  294 tttatcactctattgctttggtttttgtgcaaatacctattttttctttgt-aaattatagttgtc 358  Q
    |||||| ||||||| |||||||||| |||  |||| ||||||||||||| | ||||||||||||||    
T  888251 tttatctctctattactttggttttcgtgtcaatatctattttttctttataaaattatagttgtc 888186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 293 - 358
Target Start/End: Complemental strand, 32843937 - 32843872
Alignment:
Q  293 ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattatagttgtc 358  Q
    ||||||| |||||||||| ||||||  |||| ||||||  ||||||||||||||| ||| ||||||    
T  32843937 ctttatctctctattgctatggtttccgtgccaataccacttttttctttgtaaagtatggttgtc 32843872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 230 - 290
Target Start/End: Complemental strand, 36426088 - 36426027
Alignment:
Q  230 aaatgatatttgaacattcatc-aatgacaatttttgtgacaattttctctctcatactcac 290  Q
    ||||||||||||||||| |||  || ||||| ||||||||||| |||||| |||||||||||    
T  36426088 aaatgatatttgaacatccatttaaagacaacttttgtgacaactttctcactcatactcac 36426027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 256 - 292
Target Start/End: Original strand, 6440111 - 6440147
Alignment:
Q  256 acaatttttgtgacaattttctctctcatactcacat 292  Q
    |||| ||||||||||| ||||||||||||||||||||    
T  6440111 acaacttttgtgacaactttctctctcatactcacat 6440147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 256 - 292
Target Start/End: Complemental strand, 7777221 - 7777185
Alignment:
Q  256 acaatttttgtgacaattttctctctcatactcacat 292  Q
    |||||||||||||||| ||||||||| ||||||||||    
T  7777221 acaatttttgtgacaactttctctcttatactcacat 7777185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 256 - 292
Target Start/End: Complemental strand, 9738734 - 9738699
Alignment:
Q  256 acaatttttgtgacaattttctctctcatactcacat 292  Q
    ||||||||| |||||||||||||||||||||||||||    
T  9738734 acaattttt-tgacaattttctctctcatactcacat 9738699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 256 - 292
Target Start/End: Complemental strand, 25830287 - 25830251
Alignment:
Q  256 acaatttttgtgacaattttctctctcatactcacat 292  Q
    |||| ||||||||||| ||||||||||||||||||||    
T  25830287 acaacttttgtgacaactttctctctcatactcacat 25830251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 256 - 292
Target Start/End: Complemental strand, 33100510 - 33100474
Alignment:
Q  256 acaatttttgtgacaattttctctctcatactcacat 292  Q
    |||| ||||||||||| ||||||||||||||||||||    
T  33100510 acaacttttgtgacaactttctctctcatactcacat 33100474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 256 - 292
Target Start/End: Original strand, 35067190 - 35067226
Alignment:
Q  256 acaatttttgtgacaattttctctctcatactcacat 292  Q
    |||| ||||||||||| ||||||||||||||||||||    
T  35067190 acaacttttgtgacaactttctctctcatactcacat 35067226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 221 - 292
Target Start/End: Original strand, 41520962 - 41521034
Alignment:
Q  221 tttaatgaaaaatgatatttgaacattcatcaa-tgacaatttttgtgacaattttctctctcatactcacat 292  Q
    ||||| || ||||||||||||||||| |||  | ||| || |||||  |||||||||||||||||||||||||    
T  41520962 tttaaagagaaatgatatttgaacatccatttagtgataacttttgcaacaattttctctctcatactcacat 41521034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 256 - 292
Target Start/End: Complemental strand, 42786701 - 42786665
Alignment:
Q  256 acaatttttgtgacaattttctctctcatactcacat 292  Q
    |||||||||||||||| ||||||||| ||||||||||    
T  42786701 acaatttttgtgacaactttctctcttatactcacat 42786665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 293 - 360
Target Start/End: Original strand, 43397648 - 43397716
Alignment:
Q  293 ctttatcactctattgctttggtttttgtgcaaatac-ctattttttctttgtaaattatagttgtctc 360  Q
    ||||||| ||||| ||| ||| |||||||||||||||  ||||||| |||||||||||||  |||||||    
T  43397648 ctttatctctctaatgcattgatttttgtgcaaatactttatttttcctttgtaaattatgattgtctc 43397716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 59; Significance: 8e-25; HSPs: 84)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 230 - 358
Target Start/End: Complemental strand, 6999136 - 6998998
Alignment:
Q  230 aaatgatatttgaacattcatca-atgacaatttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttggttttt 319  Q
    ||||||||||||||||| |||   ||||||| ||||||||||| ||||||||||||||||||||         ||||||| ||||||||||||||||||     
T  6999136 aaatgatatttgaacatccattttatgacaacttttgtgacaactttctctctcatactcacattactttttactttatctctctattgctttggttttc 6999037  T
Q  320 gtgcaaatacctattttttctttgtaaattatagttgtc 358  Q
    ||||||||||| ||||||||||| |||||||| ||||||    
T  6999036 gtgcaaataccaattttttctttataaattatggttgtc 6998998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 261 - 351
Target Start/End: Original strand, 10711759 - 10711858
Alignment:
Q  261 ttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattat 351  Q
    ||||||||||||||||||||||||||||||||         ||||||| |||||||||||||||||| ||| ||||||||||||||||||||||||||||    
T  10711759 ttttgtgacaattttctctctcatactcacattactttttactttatctctctattgctttggttttcgtgtaaatacctattttttctttgtaaattat 10711858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 230 - 351
Target Start/End: Original strand, 15269864 - 15269995
Alignment:
Q  230 aaatgatatttgaacattcatca-atgacaatttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttggttttt 319  Q
    ||||||||||||||||| |||   ||||||||||||||||||| ||||||| ||||| ||||||         ||||||| ||||||||||||| ||||     
T  15269864 aaatgatatttgaacatccattttatgacaatttttgtgacaactttctctttcatattcacattactttttactttatctctctattgctttgattttc 15269963  T
Q  320 gtgcaaatacctattttttctttgtaaattat 351  Q
    ||||||||||||| ||||||||||||||||||    
T  15269964 gtgcaaatacctactttttctttgtaaattat 15269995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 229 - 358
Target Start/End: Original strand, 32869828 - 32869967
Alignment:
Q  229 aaaatgatatttgaacattcatca-atgacaatttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttggtttt 318  Q
    ||||||||||||||||||||||   |||| |||||||||||||| ||||||| ||||| | ||||         ||||||| || |||||||||||||||    
T  32869828 aaaatgatatttgaacattcattttatgataatttttgtgacaactttctctttcatatttacattattttttactttatctctttattgctttggtttt 32869927  T
Q  319 tgtgcaaatacctattttttctttgtaaattatagttgtc 358  Q
     ||||||||||| |||||||||||||||||||| ||||||    
T  32869928 cgtgcaaataccaattttttctttgtaaattatggttgtc 32869967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 255 - 351
Target Start/End: Original strand, 25881573 - 25881678
Alignment:
Q  255 gacaatttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgta 345  Q
    ||||||||||||||||| ||||||||||||||||||||         ||||||| |||| ||||||||||||| ||  ||||||||||||||||||||||    
T  25881573 gacaatttttgtgacaactttctctctcatactcacattattttttactttatctctctgttgctttggttttcgtataaatacctattttttctttgta 25881672  T
Q  346 aattat 351  Q
    ||||||    
T  25881673 aattat 25881678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 293 - 358
Target Start/End: Original strand, 29712054 - 29712119
Alignment:
Q  293 ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattatagttgtc 358  Q
    ||||||| ||||||||||||||||||| |||||||||||| |||||||||||||||||| ||||||    
T  29712054 ctttatctctctattgctttggtttttatgcaaatacctactttttctttgtaaattatggttgtc 29712119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 230 - 351
Target Start/End: Original strand, 7648395 - 7648523
Alignment:
Q  230 aaatgatatttgaacattcatcaatgacaatttttgtgacaattttctctctcatactcacat--------ctttatcactctattgctttggtttttgt 321  Q
    ||||||||||||||||| |||   |||||||||||||||||| ||| ||||||||||||| ||        ||||||| |||||||| ||||||||||||    
T  7648395 aaatgatatttgaacatccatttgtgacaatttttgtgacaactttttctctcatactcatatcatttttactttatctctctattgttttggtttttgt 7648494  T
Q  322 gcaaatacctattttttctttgtaaattat 351  Q
    ||||||| ||  ||||||||||||||||||    
T  7648495 gcaaata-cttctttttctttgtaaattat 7648523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 255 - 350
Target Start/End: Original strand, 28245757 - 28245860
Alignment:
Q  255 gacaatttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgta 345  Q
    ||||| ||||||||||| ||||||||||||||||||||         ||||||| |||||||||||||||||| ||||||||||||| ||||||||||||    
T  28245757 gacaacttttgtgacaactttctctctcatactcacattattttttactttatctctctattgctttggttttcgtgcaaataccta-tttttctttgta 28245855  T
Q  346 aatta 350  Q
    |||||    
T  28245856 aatta 28245860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 261 - 363
Target Start/End: Original strand, 5054643 - 5054754
Alignment:
Q  261 ttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattat 351  Q
    ||||||||||| ||| ||||||||||||||||         ||||||| ||||||||||||| |||| ||||||||||||| ||||||||||||||||||    
T  5054643 ttttgtgacaactttttctctcatactcacattatgtgttactttatctctctattgctttgattttcgtgcaaatacctactttttctttgtaaattat 5054742  T
Q  352 agttgtctcata 363  Q
     |||||| ||||    
T  5054743 tgttgtcacata 5054754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 253 - 358
Target Start/End: Original strand, 6170657 - 6170771
Alignment:
Q  253 atgacaatttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttggtttttgtgcaaatacctattttttctttg 343  Q
    ||||||| ||||||||||| |||||||||||||||||| |         ||||||| |||||||||||||||||| ||||||||||| ||||||| |||     
T  6170657 atgacaacttttgtgacaactttctctctcatactcacgttactttttactttatctctctattgctttggttttcgtgcaaataccaatttttttttta 6170756  T
Q  344 taaattatagttgtc 358  Q
    |||||||| ||||||    
T  6170757 taaattatggttgtc 6170771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 254 - 364
Target Start/End: Original strand, 6895923 - 6896041
Alignment:
Q  254 tgacaatttttgtgacaattttctctctcatactcacatc--------tttatcactctattgctttggtttttgtgcaaatacctattttttctttgta 345  Q
    |||||||||||||||||| ||||||||| |||||||||||        |||||  |||||||| |||| ||| ||||||||||| || ||||||||||||    
T  6895923 tgacaatttttgtgacaactttctctcttatactcacatcatttttactttatttctctattgttttgatttctgtgcaaatacttactttttctttgta 6896022  T
Q  346 aattatagttgtctcatag 364  Q
    |||||| |||||| |||||    
T  6896023 aattatggttgtcacatag 6896041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 230 - 357
Target Start/End: Complemental strand, 9634504 - 9634367
Alignment:
Q  230 aaatgatatttgaacattcatca-atgacaatttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttggttttt 319  Q
    ||||||||||||||||| |||   |||| |||||||||||||| ||| ||||||||||||||||         ||||||| || ||||| |||||||||     
T  9634504 aaatgatatttgaacatccattttatgataatttttgtgacaactttttctctcatactcacattactttttactttatctctatattgttttggttttc 9634405  T
Q  320 gtgcaaatacctattttttctttgtaaattatagttgt 357  Q
    ||||||||||| | |||||||||||||||||| |||||    
T  9634404 gtgcaaataccaactttttctttgtaaattatggttgt 9634367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 293 - 357
Target Start/End: Original strand, 7574511 - 7574575
Alignment:
Q  293 ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattatagttgt 357  Q
    ||||||| ||||||| ||||| |||| |||||||||||||||||||| |||||||||||||||||    
T  7574511 ctttatctctctattactttgattttcgtgcaaatacctattttttccttgtaaattatagttgt 7574575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 230 - 359
Target Start/End: Complemental strand, 14233787 - 14233647
Alignment:
Q  230 aaatgatatttgaacattcatcaa-tgacaatttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttggttttt 319  Q
    ||||||||||||||||| |||    |||||| ||||||||||| ||||||||||||||||| ||         ||||||| |||||||||||||||||||    
T  14233787 aaatgatatttgaacatccattttgtgacaacttttgtgacaaatttctctctcatactcatattactttttactttatctctctattgctttggttttt 14233688  T
Q  320 gtgcaaatacct-attttttctttgtaaattatagttgtct 359  Q
    |||||||||  | | |||||||||||||||||| |||||||    
T  14233687 gtgcaaatatttaactttttctttgtaaattatggttgtct 14233647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 261 - 363
Target Start/End: Complemental strand, 23352941 - 23352832
Alignment:
Q  261 ttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattat 351  Q
    ||||||||||| ||||||||||||||||||||         |||||||  ||||||||||||||||| |||||||||| || ||||||||||||||||||    
T  23352941 ttttgtgacaactttctctctcatactcacattattttttactttatc--tctattgctttggttttcgtgcaaatacatactttttctttgtaaattat 23352844  T
Q  352 agttgtctcata 363  Q
     |||||| ||||    
T  23352843 ggttgtcccata 23352832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 230 - 358
Target Start/End: Original strand, 37105644 - 37105779
Alignment:
Q  230 aaatgatatttgaacattcatca-atgacaatttttgtgacaattttctctctcatactcacat------ctttatcactctattgctttggtttttgtg 322  Q
    ||||||||||||||||| |||   |||| |||||||||||||| ||||||| ||||||| ||||      |||||||  ||||||||||| ||||| |||    
T  37105644 aaatgatatttgaacatccattttatgataatttttgtgacaactttctctttcatactaacattttttactttatctttctattgctttcgttttcgtg 37105743  T
Q  323 caaatacctattttttctttgtaaattatagttgtc 358  Q
    || ||||| | |||||||||||||||||| ||||||    
T  37105744 cacataccaactttttctttgtaaattatggttgtc 37105779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 258 - 358
Target Start/End: Complemental strand, 18876961 - 18876851
Alignment:
Q  258 aatttttgtgacaattttctctctcatactcacat----------ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaa 347  Q
    |||||||||||||| ||||||||||||| ||||||          ||||||| |||||||||||||||||  ||||||||||||| ||||||||| ||||    
T  18876961 aatttttgtgacaactttctctctcatattcacataatttttttactttatctctctattgctttggtttccgtgcaaatacctactttttctttataaa 18876862  T
Q  348 ttatagttgtc 358  Q
    |||| ||||||    
T  18876861 ttatggttgtc 18876851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 261 - 363
Target Start/End: Complemental strand, 40937100 - 40936989
Alignment:
Q  261 ttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattat 351  Q
    |||||||| || ||||||||||||||||||||         ||||||| ||||||||||||| |||| ||||||||||| | ||||||||||||||||||    
T  40937100 ttttgtgataactttctctctcatactcacattattttttactttatctctctattgctttgattttcgtgcaaatacccactttttctttgtaaattat 40937001  T
Q  352 agttgtctcata 363  Q
     |||||| ||||    
T  40937000 ggttgtcacata 40936989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 265 - 358
Target Start/End: Original strand, 42678788 - 42678891
Alignment:
Q  265 gtgacaattttctctctcatactcacat---------ctttatcactctattgctttggtttttgtgcaaataccta-ttttttctttgtaaattatagt 354  Q
    ||||||| ||||||||||||||||||||         ||||||| |||||||||||||||||  ||||||||||||| ||||||||||||||||||| ||    
T  42678788 gtgacaactttctctctcatactcacattattttttactttatctctctattgctttggtttccgtgcaaatacctacttttttctttgtaaattatggt 42678887  T
Q  355 tgtc 358  Q
    ||||    
T  42678888 tgtc 42678891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 254 - 351
Target Start/End: Original strand, 2221021 - 2221127
Alignment:
Q  254 tgacaatttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgt 344  Q
    ||||||||||||||| || ||||||||||||||||||||         ||||||| ||||||||||||| |||  ||||||||||||| ||||||||| |    
T  2221021 tgacaatttttgtgataactttctctctcatactcacattatttttcactttatctctctattgctttgatttccgtgcaaatacctactttttctttat 2221120  T
Q  345 aaattat 351  Q
    |||||||    
T  2221121 aaattat 2221127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 293 - 351
Target Start/End: Original strand, 9377532 - 9377590
Alignment:
Q  293 ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattat 351  Q
    ||||||| |||||||||||||||||| ||||||||| ||| ||||||||||||||||||    
T  9377532 ctttatctctctattgctttggttttcgtgcaaatatctactttttctttgtaaattat 9377590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 230 - 358
Target Start/End: Original strand, 18723597 - 18723735
Alignment:
Q  230 aaatgatatttgaacattcatcaa-tgacaatttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttggttttt 319  Q
    ||||||||||||||||| |||    ||||||||||||| |||| ||||||||||||||||||||         ||||||| || |||||||||| ||||     
T  18723597 aaatgatatttgaacatccattttgtgacaatttttgttacaactttctctctcatactcacattattttttactttatctctttattgctttgattttc 18723696  T
Q  320 gtgcaaatacctattttttctttgtaaattatagttgtc 358  Q
    ||||||||||||||| |||||||  ||||||| ||||||    
T  18723697 gtgcaaatacctattctttctttacaaattatggttgtc 18723735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 218 - 361
Target Start/End: Complemental strand, 22526073 - 22525923
Alignment:
Q  218 aaatttaatgaaaaatgatatttgaacattcatcaat-gacaatttttgtgacaattttctctctcatactcacat---------ctttatcactctatt 307  Q
    |||||||| |||||||||||||||||||| |||   | ||||||||||||||||| ||||||| | ||| ||||||         |||||||  ||||||    
T  22526073 aaatttaa-gaaaaatgatatttgaacatccattttttgacaatttttgtgacaactttctcttttatattcacattattttttactttatc--tctatt 22525977  T
Q  308 gctttggtttttgtgcaaatacctattttttctttgtaaattatagttgtctca 361  Q
    |||||| |||| |||||||| |||| |||||||||||||||||| |||||||||    
T  22525976 gctttgattttcgtgcaaatgcctactttttctttgtaaattatggttgtctca 22525923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 254 - 351
Target Start/End: Original strand, 29361048 - 29361154
Alignment:
Q  254 tgacaatttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgt 344  Q
    |||||| |||||||| |||||||||| ||||||||||||         ||||||| ||||||||||||| ||||||| |||||||||| ||||||||| |    
T  29361048 tgacaacttttgtgataattttctctttcatactcacataaatttttactttatctctctattgctttgatttttgtacaaatacctactttttctttat 29361147  T
Q  345 aaattat 351  Q
    |||||||    
T  29361148 aaattat 29361154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 230 - 358
Target Start/End: Complemental strand, 35589455 - 35589317
Alignment:
Q  230 aaatgatatttgaacattcatcaa-tgacaatttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttggttttt 319  Q
    ||||||||||||||||| |||    |||||| |||||  |||||||||||||||||||||||||         ||||||| |||||||| |||||||||     
T  35589455 aaatgatatttgaacatccattttgtgacaacttttgcaacaattttctctctcatactcacattactttttactttatctctctattgttttggttttc 35589356  T
Q  320 gtgcaaatacctattttttctttgtaaattatagttgtc 358  Q
    ||||||||| | | |||||||||||||||||| ||||||    
T  35589355 gtgcaaatatcaactttttctttgtaaattatggttgtc 35589317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 230 - 358
Target Start/End: Complemental strand, 4062027 - 4061892
Alignment:
Q  230 aaatgatatttgaacattcatc-aatgacaatttttgtgacaattttctctctcatactcacat--------ctttatcactctattgctttggtttttg 320  Q
    ||||||||||||||||| |||  ||||||||||||||||||||   ||||||||||||||| ||        ||||||| |||||||| ||||||||  |    
T  4062027 aaatgatatttgaacatccatttaatgacaatttttgtgacaa--ctctctctcatactcatattatttttactttatctctctattgttttggtttccg 4061930  T
Q  321 tgcaaatacctattttttctttgtaaattatagttgtc 358  Q
    ||||||||| || ||||||||| |||||||| ||||||    
T  4061929 tgcaaatacatactttttctttataaattatggttgtc 4061892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 293 - 358
Target Start/End: Original strand, 20911877 - 20911942
Alignment:
Q  293 ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattatagttgtc 358  Q
    ||||||| |||||||||||||||||  ||||||||| |||||||||||||||||| ||| ||||||    
T  20911877 ctttatctctctattgctttggtttccgtgcaaatatctattttttctttgtaaaatatggttgtc 20911942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 293 - 358
Target Start/End: Complemental strand, 44711984 - 44711919
Alignment:
Q  293 ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattatagttgtc 358  Q
    ||||||| ||||||||||||| |||| ||||||||||||||| ||||||| ||||||||| |||||    
T  44711984 ctttatctctctattgctttgattttcgtgcaaatacctattctttctttataaattataattgtc 44711919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 230 - 351
Target Start/End: Original strand, 2563707 - 2563838
Alignment:
Q  230 aaatgatatttgaacattcatca-atgacaatttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttggttttt 319  Q
    ||||||||||||||||| |||   ||||||| ||||||||||| ||||||||||||||| ||||         |||||||  ||||||| |||||||||     
T  2563707 aaatgatatttgaacatccattttatgacaacttttgtgacaactttctctctcatacttacatttctttttactttatctttctattgttttggttttc 2563806  T
Q  320 gtgcaaatacctattttttctttgtaaattat 351  Q
    ||||||||||| | ||||||||| ||||||||    
T  2563807 gtgcaaataccaactttttctttataaattat 2563838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 230 - 358
Target Start/End: Original strand, 13765403 - 13765541
Alignment:
Q  230 aaatgatatttgaacattcatca-atgacaatttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttggttttt 319  Q
    ||||||||||||||||| |||   ||||||| ||||||||||| |||||||||||||||||  |         |||||||  || ||||||||||||||     
T  13765403 aaatgatatttgaacatccattttatgacaacttttgtgacaactttctctctcatactcatgttactttttactttatctttcgattgctttggttttc 13765502  T
Q  320 gtgcaaatacctattttttctttgtaaattatagttgtc 358  Q
    ||||||||||| | ||||| |||||||||||| ||||||    
T  13765503 gtgcaaataccaactttttatttgtaaattatggttgtc 13765541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 230 - 292
Target Start/End: Complemental strand, 22888889 - 22888827
Alignment:
Q  230 aaatgatatttgaacattcatcaatgacaatttttgtgacaattttctctctcatactcacat 292  Q
    ||||||||||||||||  |||   |||||||||||||||||| ||||||||||||||||||||    
T  22888889 aaatgatatttgaacaaccatttttgacaatttttgtgacaactttctctctcatactcacat 22888827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 230 - 358
Target Start/End: Original strand, 36802899 - 36803037
Alignment:
Q  230 aaatgatatttgaacattcatcaa-tgacaatttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttggttttt 319  Q
    ||||||||||||||||| |||    |||||| |||||  |||| ||||||||||||||||||||         ||||||| ||||||| ||||| |||||    
T  36802899 aaatgatatttgaacatccattttgtgacaacttttgctacaactttctctctcatactcacattattttttactttatctctctattactttgattttt 36802998  T
Q  320 gtgcaaatacctattttttctttgtaaattatagttgtc 358  Q
    ||||||||||||||| |||||||  ||||||| ||||||    
T  36802999 gtgcaaatacctattctttctttacaaattatggttgtc 36803037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 230 - 292
Target Start/End: Original strand, 41195587 - 41195649
Alignment:
Q  230 aaatgatatttgaacattcatcaatgacaatttttgtgacaattttctctctcatactcacat 292  Q
    |||||||||||||| | ||||   |||||| ||||||||||||||||||||||||||||||||    
T  41195587 aaatgatatttgaataatcatttttgacaacttttgtgacaattttctctctcatactcacat 41195649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 293 - 358
Target Start/End: Complemental strand, 28244235 - 28244171
Alignment:
Q  293 ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattatagttgtc 358  Q
    ||||||| ||||||||||||| |||| |||||| ||||||||||||||||| |||||||| |||||    
T  28244235 ctttatctctctattgctttgattttcgtgcaa-tacctattttttctttgcaaattataattgtc 28244171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 230 - 293
Target Start/End: Original strand, 433853 - 433917
Alignment:
Q  230 aaatgatatttgaacattcatcaa-tgacaatttttgtgacaattttctctctcatactcacatc 293  Q
    ||||||||||||||||||||| || ||| ||||||||  |||| |||||||||||||||||||||    
T  433853 aaatgatatttgaacattcattaagtgataatttttgcaacaactttctctctcatactcacatc 433917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 310 - 357
Target Start/End: Complemental strand, 11167497 - 11167449
Alignment:
Q  310 tttggtttttgtgcaaatacctatt-ttttctttgtaaattatagttgt 357  Q
    ||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  11167497 tttggtttttgtgcaaatacctatttttttctttgtaaattatggttgt 11167449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 253 - 293
Target Start/End: Complemental strand, 11385058 - 11385018
Alignment:
Q  253 atgacaatttttgtgacaattttctctctcatactcacatc 293  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  11385058 atgacaatttttgtgataattttctctctcatactcacatc 11385018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 230 - 338
Target Start/End: Complemental strand, 30546437 - 30546320
Alignment:
Q  230 aaatgatatttgaacattcatc-aatgacaatttttgtgacaattttctctctcatactcacat--------ctttatcactctattgctttggtttttg 320  Q
    |||||||||||||| || |||  ||||| |||||||||||||||||||||||||||| ||| ||        ||||||| |||||||| |||||||||      
T  30546437 aaatgatatttgaatatccatttaatgataatttttgtgacaattttctctctcatattcatattatttttactttatctctctattgttttggttttca 30546338  T
Q  321 tgcaaatacctatttttt 338  Q
    |||||||||||| |||||    
T  30546337 tgcaaatacctacttttt 30546320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 253 - 358
Target Start/End: Complemental strand, 1416083 - 1415968
Alignment:
Q  253 atgacaatttttgtgacaattttctctctcatactcacatc---------tttatcactctattgctttggtttttgtgcaaataccta-ttttttcttt 342  Q
    |||| |||||||||||||||||| ||||||||||| ||||          |||||| |||||||||||| |||||||| ||||| |||| ||||||||||    
T  1416083 atgataatttttgtgacaattttttctctcatacttacattactttttaatttatctctctattgctttagtttttgtacaaatgcctatttttttcttt 1415984  T
Q  343 gtaaattatagttgtc 358  Q
     |||||||| ||||||    
T  1415983 ataaattatggttgtc 1415968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 230 - 358
Target Start/End: Complemental strand, 13347883 - 13347744
Alignment:
Q  230 aaatgatatttgaacattcatcaa-tgacaatttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttggttttt 319  Q
    ||||||||||||||||| |||    ||||||||||||  |||| ||||||||||||||||||||         ||||||| ||||||||||||||||||     
T  13347883 aaatgatatttgaacatccattttgtgacaatttttgcaacaactttctctctcatactcacattactttttactttatctctctattgctttggttttc 13347784  T
Q  320 gtgcaaataccta-ttttttctttgtaaattatagttgtc 358  Q
    |||||| |||| | || ||| |||||||||||| ||||||    
T  13347783 gtgcaattaccaacttatttttttgtaaattatggttgtc 13347744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 305 - 363
Target Start/End: Original strand, 1836101 - 1836159
Alignment:
Q  305 attgctttggtttttgtgcaaatacctattttttctttgtaaattatagttgtctcata 363  Q
    ||||||||| |||| ||| ||||| ||| |||||||||||||||||| |||||||||||    
T  1836101 attgctttgattttcgtgtaaatatctaatttttctttgtaaattatggttgtctcata 1836159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 293 - 351
Target Start/End: Complemental strand, 4299318 - 4299260
Alignment:
Q  293 ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattat 351  Q
    ||||||| ||||||||||||| |||| ||||||||| ||||| |||||||| |||||||    
T  4299318 ctttatctctctattgctttgattttcgtgcaaatatctattctttctttgcaaattat 4299260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 230 - 292
Target Start/End: Original strand, 9207593 - 9207655
Alignment:
Q  230 aaatgatatttgaacattcatcaatgacaatttttgtgacaattttctctctcatactcacat 292  Q
    |||||||||||||||| ||||   | |||| ||||||||||| ||||||||||||||||||||    
T  9207593 aaatgatatttgaacaatcattttttacaacttttgtgacaactttctctctcatactcacat 9207655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 294 - 368
Target Start/End: Complemental strand, 12498630 - 12498557
Alignment:
Q  294 tttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattatagttgtctcatagttgt 368  Q
    |||||| ||||||||  |||||||| |||||||||||||| |||||||||||||||||  ||||| |||| ||||    
T  12498630 tttatctctctattgtcttggttttcgtgcaaatacctat-ttttctttgtaaattatgattgtcacataattgt 12498557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 256 - 293
Target Start/End: Original strand, 4384084 - 4384121
Alignment:
Q  256 acaatttttgtgacaattttctctctcatactcacatc 293  Q
    |||||||||||||||| |||||||||||||||||||||    
T  4384084 acaatttttgtgacaactttctctctcatactcacatc 4384121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 228 - 293
Target Start/End: Complemental strand, 8848765 - 8848700
Alignment:
Q  228 aaaaatgatatttgaacattcatcaatgacaatttttgtgacaattttctctctcatactcacatc 293  Q
    ||||||||||||||||||  |||   |||||| ||||||||||| ||||||||||| |||||||||    
T  8848765 aaaaatgatatttgaacaaccatttttgacaacttttgtgacaactttctctctcacactcacatc 8848700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 294 - 351
Target Start/End: Complemental strand, 12889826 - 12889769
Alignment:
Q  294 tttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattat 351  Q
    |||||| ||||||||||||| |||||||||||||| ||||| |||||||  |||||||    
T  12889826 tttatctctctattgctttgatttttgtgcaaatatctattctttctttacaaattat 12889769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 253 - 360
Target Start/End: Original strand, 26206874 - 26206991
Alignment:
Q  253 atgacaatttttgtgacaattttctctctcatactcacat---------ctttatcactct-attgctttggtttttgtgcaaatacctattttttcttt 342  Q
    |||||||||||||| | || ||||||||||||||||||||         ||||||| |||| ||||||||| |||| ||||||||||||||| |||||||    
T  26206874 atgacaatttttgttataactttctctctcatactcacattattttttactttatctctcttattgctttgattttcgtgcaaatacctattctttcttt 26206973  T
Q  343 gtaaattatagttgtctc 360  Q
      |||||||  |||||||    
T  26206974 acaaattatgattgtctc 26206991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 293 - 358
Target Start/End: Complemental strand, 39213765 - 39213700
Alignment:
Q  293 ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattatagttgtc 358  Q
    ||||||| ||||||| |||| ||||| ||||||||||| | ||||||||||||||| || ||||||    
T  39213765 ctttatctctctattcctttagttttcgtgcaaataccaactttttctttgtaaatgatggttgtc 39213700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 253 - 293
Target Start/End: Original strand, 14255329 - 14255369
Alignment:
Q  253 atgacaatttttgtgacaattttctctctcatactcacatc 293  Q
    ||||||| |||||||||||||||||||| ||||||||||||    
T  14255329 atgacaacttttgtgacaattttctctcacatactcacatc 14255369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 294 - 358
Target Start/End: Complemental strand, 24563011 - 24562947
Alignment:
Q  294 tttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattatagttgtc 358  Q
    |||||| |||||||||||||||||| ||| ||||||| |  |||||||| |||||||| ||||||    
T  24563011 tttatctctctattgctttggttttcgtgtaaataccaaccttttctttataaattatggttgtc 24562947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 357
Target Start/End: Original strand, 39449343 - 39449407
Alignment:
Q  293 ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattatagttgt 357  Q
    ||||||| ||||||||||||| |||| ||||||||||| | ||||||||| ||||| || |||||    
T  39449343 ctttatctctctattgctttgattttcgtgcaaataccaactttttctttataaatgatggttgt 39449407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 254 - 289
Target Start/End: Complemental strand, 7502471 - 7502436
Alignment:
Q  254 tgacaatttttgtgacaattttctctctcatactca 289  Q
    |||||||||||||||||| |||||||||||||||||    
T  7502471 tgacaatttttgtgacaactttctctctcatactca 7502436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 253 - 292
Target Start/End: Original strand, 38821393 - 38821432
Alignment:
Q  253 atgacaatttttgtgacaattttctctctcatactcacat 292  Q
    ||||||| ||||||||||||||||| ||||||||||||||    
T  38821393 atgacaacttttgtgacaattttctttctcatactcacat 38821432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 261 - 292
Target Start/End: Complemental strand, 42607567 - 42607536
Alignment:
Q  261 ttttgtgacaattttctctctcatactcacat 292  Q
    ||||||||||||||||||||||||||||||||    
T  42607567 ttttgtgacaattttctctctcatactcacat 42607536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 261 - 351
Target Start/End: Original strand, 42866785 - 42866884
Alignment:
Q  261 ttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattat 351  Q
    ||||||||||| ||| ||||||||||||||||         ||||||| ||||||||||||| | || ||||||||| | | ||||||||||||||||||    
T  42866785 ttttgtgacaactttttctctcatactcacattattttttactttatctctctattgctttgatcttcgtgcaaatatccactttttctttgtaaattat 42866884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 230 - 288
Target Start/End: Original strand, 44254602 - 44254661
Alignment:
Q  230 aaatgatatttgaacattcat-caatgacaatttttgtgacaattttctctctcatactc 288  Q
    ||||||||||||||||||||| |  |||||| |||||| |||| ||||||||||||||||    
T  44254602 aaatgatatttgaacattcattctgtgacaacttttgttacaactttctctctcatactc 44254661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 301 - 363
Target Start/End: Complemental strand, 4023337 - 4023275
Alignment:
Q  301 ctctattgctttggtttttgtgcaaatacctattttttctttgtaaattatagttgtctcata 363  Q
    |||||||||||||||||| ||| ||| || ||  |||||||||||||||||  ||||||||||    
T  4023337 ctctattgctttggttttcgtgtaaagacttacattttctttgtaaattatgattgtctcata 4023275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 230 - 285
Target Start/End: Original strand, 7552557 - 7552614
Alignment:
Q  230 aaatgatatttgaacattcatc--aatgacaatttttgtgacaattttctctctcata 285  Q
    |||||||||||||||||||||   |||||||| |||||| |||| |||||||||||||    
T  7552557 aaatgatatttgaacattcattttaatgacaacttttgtaacaactttctctctcata 7552614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 254 - 292
Target Start/End: Original strand, 8427580 - 8427618
Alignment:
Q  254 tgacaatttttgtgacaattttctctctcatactcacat 292  Q
    |||||||||||||||||| ||||||||||||||| ||||    
T  8427580 tgacaatttttgtgacaactttctctctcatacttacat 8427618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 301 - 351
Target Start/End: Original strand, 16677754 - 16677804
Alignment:
Q  301 ctctattgctttggtttttgtgcaaatacctattttttctttgtaaattat 351  Q
    |||||||||||||||||| |||||||||   ||||||||||| ||||||||    
T  16677754 ctctattgctttggttttcgtgcaaatattaattttttctttataaattat 16677804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 230 - 292
Target Start/End: Complemental strand, 18254277 - 18254215
Alignment:
Q  230 aaatgatatttgaacattcatcaatgacaatttttgtgacaattttctctctcatactcacat 292  Q
    ||||||||||||||||  |||   | |||| ||||||||||| ||||||||||||||||||||    
T  18254277 aaatgatatttgaacaaccattttttacaacttttgtgacaactttctctctcatactcacat 18254215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 258 - 292
Target Start/End: Complemental strand, 21738655 - 21738621
Alignment:
Q  258 aatttttgtgacaattttctctctcatactcacat 292  Q
    ||||||||||| |||||||||||||||||||||||    
T  21738655 aatttttgtgataattttctctctcatactcacat 21738621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 254 - 292
Target Start/End: Complemental strand, 31922336 - 31922298
Alignment:
Q  254 tgacaatttttgtgacaattttctctctcatactcacat 292  Q
    |||||||||||||||||| ||||||||||| ||||||||    
T  31922336 tgacaatttttgtgacaactttctctctcaaactcacat 31922298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 230 - 292
Target Start/End: Complemental strand, 34945158 - 34945096
Alignment:
Q  230 aaatgatatttgaacattcatcaatgacaatttttgtgacaattttctctctcatactcacat 292  Q
    |||||||||||||||| ||||   | | ||||||| |||||| ||||||||||||||||||||    
T  34945158 aaatgatatttgaacaatcattttttataatttttatgacaactttctctctcatactcacat 34945096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 254 - 292
Target Start/End: Complemental strand, 37731243 - 37731205
Alignment:
Q  254 tgacaatttttgtgacaattttctctctcatactcacat 292  Q
    |||||| |||||||||||||||||||||||||| |||||    
T  37731243 tgacaacttttgtgacaattttctctctcatacacacat 37731205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 258 - 292
Target Start/End: Complemental strand, 40210107 - 40210073
Alignment:
Q  258 aatttttgtgacaattttctctctcatactcacat 292  Q
    |||||||||||||| ||||||||||||||||||||    
T  40210107 aatttttgtgacaactttctctctcatactcacat 40210073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 254 - 291
Target Start/End: Original strand, 14876985 - 14877022
Alignment:
Q  254 tgacaatttttgtgacaattttctctctcatactcaca 291  Q
    |||||| ||||||||||| |||||||||||||||||||    
T  14876985 tgacaacttttgtgacaactttctctctcatactcaca 14877022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 230 - 290
Target Start/End: Complemental strand, 29684680 - 29684619
Alignment:
Q  230 aaatgatatttgaacattcatcaa-tgacaatttttgtgacaattttctctctcatactcac 290  Q
    |||||||||||||||||| ||  | ||||||||||||  |||| ||||||||||||||||||    
T  29684680 aaatgatatttgaacatttatttagtgacaatttttgcaacaactttctctctcatactcac 29684619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 230 - 292
Target Start/End: Original strand, 31389549 - 31389613
Alignment:
Q  230 aaatgatatttgaacattcatcaatgacaa--tttttgtgacaattttctctctcatactcacat 292  Q
    |||||||||||||||||||||  |  ||||  ||| ||||| |||||||||||||||||||||||    
T  31389549 aaatgatatttgaacattcatttagtacaacttttgtgtgataattttctctctcatactcacat 31389613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 259 - 292
Target Start/End: Original strand, 37003643 - 37003676
Alignment:
Q  259 atttttgtgacaattttctctctcatactcacat 292  Q
    ||||||||||||| ||||||||||||||||||||    
T  37003643 atttttgtgacaactttctctctcatactcacat 37003676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 293 - 358
Target Start/End: Original strand, 43513488 - 43513552
Alignment:
Q  293 ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattatagttgtc 358  Q
    ||||||| ||||||||||||| |||| |||| ||||||||||| || |||||||||| | ||||||    
T  43513488 ctttatctctctattgctttgattttcgtgc-aatacctatttcttttttgtaaattttggttgtc 43513552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 230 - 358
Target Start/End: Complemental strand, 670535 - 670402
Alignment:
Q  230 aaatgatatttgaacattcatcaa-tgacaatttttgtgacaattttctctctcatactcacatc----tttatcactctattgctttggtttttgtgca 324  Q
    ||||||||||||||||| |||  | |||||| |||||| |||| |||||| || ||||||||||     |||||| |||||||||| || |||  |||      
T  670535 aaatgatatttgaacatccatttagtgacaacttttgtaacaactttctcgcttatactcacattactttttatctctctattgctatgatttccgtgtc 670436  T
Q  325 aatacctattttttctttgtaaattatagttgtc 358  Q
    ||||||  ||||||||||||||| ||| ||||||    
T  670435 aataccatttttttctttgtaaaatatggttgtc 670402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 315 - 363
Target Start/End: Complemental strand, 3012825 - 3012777
Alignment:
Q  315 tttttgtgcaaatacctattttttctttgtaaattatagttgtctcata 363  Q
    |||||||||||||||||| |||||||||  ||||||| |||||| ||||    
T  3012825 tttttgtgcaaatacctactttttctttaaaaattatggttgtcccata 3012777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 261 - 293
Target Start/End: Original strand, 6646858 - 6646890
Alignment:
Q  261 ttttgtgacaattttctctctcatactcacatc 293  Q
    ||||||||||| |||||||||||||||||||||    
T  6646858 ttttgtgacaactttctctctcatactcacatc 6646890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 301 - 349
Target Start/End: Complemental strand, 7664053 - 7664006
Alignment:
Q  301 ctctattgctttggtttttgtgcaaatacctattttttctttgtaaatt 349  Q
    ||||||||||||||||||||||  |||||||  ||||||||||||||||    
T  7664053 ctctattgctttggtttttgtgtcaatacct-ctttttctttgtaaatt 7664006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 256 - 292
Target Start/End: Original strand, 9194270 - 9194306
Alignment:
Q  256 acaatttttgtgacaattttctctctcatactcacat 292  Q
    |||||||||||||||  ||||||||||||||||||||    
T  9194270 acaatttttgtgacatctttctctctcatactcacat 9194306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #78
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 260 - 292
Target Start/End: Original strand, 9760051 - 9760083
Alignment:
Q  260 tttttgtgacaattttctctctcatactcacat 292  Q
    |||||||||||| ||||||||||||||||||||    
T  9760051 tttttgtgacaactttctctctcatactcacat 9760083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #79
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 258 - 290
Target Start/End: Complemental strand, 12784438 - 12784406
Alignment:
Q  258 aatttttgtgacaattttctctctcatactcac 290  Q
    |||||||||||||| ||||||||||||||||||    
T  12784438 aatttttgtgacaactttctctctcatactcac 12784406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #80
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 256 - 292
Target Start/End: Complemental strand, 14499065 - 14499029
Alignment:
Q  256 acaatttttgtgacaattttctctctcatactcacat 292  Q
    |||||||||||||||||||||||||  ||||||||||    
T  14499065 acaatttttgtgacaattttctctcatatactcacat 14499029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #81
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 261 - 293
Target Start/End: Complemental strand, 32972943 - 32972911
Alignment:
Q  261 ttttgtgacaattttctctctcatactcacatc 293  Q
    ||||||||||| |||||||||||||||||||||    
T  32972943 ttttgtgacaactttctctctcatactcacatc 32972911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #82
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 294 - 358
Target Start/End: Complemental strand, 33780389 - 33780325
Alignment:
Q  294 tttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattatagttgtc 358  Q
    |||||| || ||||||||||  ||| ||||||||| |||| ||||||||||||| ||| ||||||    
T  33780389 tttatctctttattgctttgagtttcgtgcaaatatctatattttctttgtaaactatggttgtc 33780325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #83
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 256 - 292
Target Start/End: Original strand, 34372877 - 34372912
Alignment:
Q  256 acaatttttgtgacaattttctctctcatactcacat 292  Q
    ||||||||| |||||||||||||||||||||||||||    
T  34372877 acaattttt-tgacaattttctctctcatactcacat 34372912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #84
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 256 - 292
Target Start/End: Complemental strand, 34431868 - 34431832
Alignment:
Q  256 acaatttttgtgacaattttctctctcatactcacat 292  Q
    |||||||||||||||| ||||||||| ||||||||||    
T  34431868 acaatttttgtgacaactttctctcttatactcacat 34431832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 59; Significance: 8e-25; HSPs: 90)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 230 - 358
Target Start/End: Original strand, 13489665 - 13489803
Alignment:
Q  230 aaatgatatttgaacattcatca-atgacaatttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttggttttt 319  Q
    ||||||||||||||||| |||   ||||||| ||||||||||| ||||||||||||||||||||         ||||||| ||||||||||||||||||     
T  13489665 aaatgatatttgaacatccattttatgacaacttttgtgacaactttctctctcatactcacattactttttactttatctctctattgctttggttttc 13489764  T
Q  320 gtgcaaatacctattttttctttgtaaattatagttgtc 358  Q
    ||||||||||| | |||||||||||||||||| ||||||    
T  13489765 gtgcaaataccaactttttctttgtaaattatggttgtc 13489803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 230 - 358
Target Start/End: Original strand, 52362485 - 52362623
Alignment:
Q  230 aaatgatatttgaacattcatca-atgacaatttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttggttttt 319  Q
    ||||||||||||||||| |||   ||||||| ||||||||||| ||||||||||||||||||||         ||||||| ||||||||||||||||||     
T  52362485 aaatgatatttgaacatccattttatgacaacttttgtgacaactttctctctcatactcacattattttttactttatctctctattgctttggttttc 52362584  T
Q  320 gtgcaaatacctattttttctttgtaaattatagttgtc 358  Q
    ||||||||||| | ||||||||| |||||||| ||||||    
T  52362585 gtgcaaataccaactttttctttataaattatggttgtc 52362623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 230 - 358
Target Start/End: Complemental strand, 10890114 - 10889976
Alignment:
Q  230 aaatgatatttgaacattcatca-atgacaatttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttggttttt 319  Q
    ||||||||||||||||| |||   ||||||| ||||||||||| ||||||||||||||||||||         ||||||| ||||||||||||| ||||     
T  10890114 aaatgatatttgaacatccattttatgacaacttttgtgacaactttctctctcatactcacattactttttactttatctctctattgctttgattttc 10890015  T
Q  320 gtgcaaatacctattttttctttgtaaattatagttgtc 358  Q
    ||||| ||||| | |||||||||||||||||| ||||||    
T  10890014 gtgcacataccaactttttctttgtaaattatggttgtc 10889976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 230 - 358
Target Start/End: Complemental strand, 15705130 - 15704992
Alignment:
Q  230 aaatgatatttgaacattcatca-atgacaatttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttggttttt 319  Q
    ||||||||||||||||| |||   ||||||| ||||||||||| ||||||||||||||||||||         |||||||| ||||||| |||||||||     
T  15705130 aaatgatatttgaacatccattttatgacaacttttgtgacaactttctctctcatactcacattactttttactttatcattctattgttttggttttc 15705031  T
Q  320 gtgcaaatacctattttttctttgtaaattatagttgtc 358  Q
    ||||||||||| | ||||||||| |||||||| ||||||    
T  15705030 gtgcaaataccaactttttctttataaattatggttgtc 15704992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 230 - 358
Target Start/End: Complemental strand, 34254419 - 34254281
Alignment:
Q  230 aaatgatatttgaacattcatca-atgacaatttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttggttttt 319  Q
    |||||||||||||||||||||   ||||||| || |||||||| ||| ||||||||||||||||         ||||||| || |||||||||||||||     
T  34254419 aaatgatatttgaacattcattttatgacaacttctgtgacaactttatctctcatactcacattactttttactttatctctttattgctttggttttc 34254320  T
Q  320 gtgcaaatacctattttttctttgtaaattatagttgtc 358  Q
    ||||||||||  | |||||||||||||||||||||||||    
T  34254319 gtgcaaatacaaactttttctttgtaaattatagttgtc 34254281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 251 - 356
Target Start/End: Original strand, 52267228 - 52267341
Alignment:
Q  251 caatgacaatttttgtgacaattttctctctcatactcacat--------ctttatcactctattgctttggtttttgtgcaaatacctattttttcttt 342  Q
    ||||||||||||||||||||| ||||||||||||||||||||         |||||| |||||||  |||||||| |||||||||||||||||||| |||    
T  52267228 caatgacaatttttgtgacaactttctctctcatactcacattatttttattttatctctctatttttttggtttctgtgcaaatacctattttttattt 52267327  T
Q  343 gtaaattatagttg 356  Q
     |||||||| ||||    
T  52267328 ataaattatggttg 52267341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 261 - 363
Target Start/End: Original strand, 8200110 - 8200221
Alignment:
Q  261 ttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattat 351  Q
    ||||||||||| ||||||||||||||||||||         ||||||| |||||||||||||||||| |||||| ||| || ||||||||||||||||||    
T  8200110 ttttgtgacaactttctctctcatactcacattattttttactttatccctctattgctttggttttcgtgcaactacgtactttttctttgtaaattat 8200209  T
Q  352 agttgtctcata 363  Q
     |||||| ||||    
T  8200210 ggttgtcccata 8200221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 253 - 351
Target Start/End: Complemental strand, 32915116 - 32915009
Alignment:
Q  253 atgacaatttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttggtttttgtgcaaatacctattttttctttg 343  Q
    ||||||| ||||||||||| ||||||||||||||||||||         ||||||| |||||||| ||||||||| ||||||||||| | ||||||||||    
T  32915116 atgacaacttttgtgacaactttctctctcatactcacattactttttactttatctctctattgttttggttttcgtgcaaataccaactttttctttg 32915017  T
Q  344 taaattat 351  Q
    ||||||||    
T  32915016 taaattat 32915009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 258 - 363
Target Start/End: Original strand, 50824773 - 50824887
Alignment:
Q  258 aatttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaat 348  Q
    |||||||||||||||||||||||||||||||| ||         ||||||| ||||||||||||||||||  ||  |||||||| |||||||||||||||    
T  50824773 aatttttgtgacaattttctctctcatactcatattattttttactttatctctctattgctttggttttcatgtcaatacctactttttctttgtaaat 50824872  T
Q  349 tatagttgtctcata 363  Q
    ||| ||||| |||||    
T  50824873 tatggttgtatcata 50824887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 261 - 357
Target Start/End: Original strand, 18336181 - 18336286
Alignment:
Q  261 ttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattat 351  Q
    ||||||||||| ||||||||||||||||||||         ||||||| ||||||||||||| |||||||||| |||||||  |||||||||||||||||    
T  18336181 ttttgtgacaactttctctctcatactcacattagtttttactttatctctctattgctttgatttttgtgcagatacctaccttttctttgtaaattat 18336280  T
Q  352 agttgt 357  Q
     |||||    
T  18336281 ggttgt 18336286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 293 - 358
Target Start/End: Complemental strand, 50328136 - 50328071
Alignment:
Q  293 ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattatagttgtc 358  Q
    ||||||| |||||||||||||||||| ||||||||||| | |||||||||||||||||| ||||||    
T  50328136 ctttatctctctattgctttggttttcgtgcaaataccaactttttctttgtaaattatggttgtc 50328071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 267 - 358
Target Start/End: Complemental strand, 40316974 - 40316874
Alignment:
Q  267 gacaattttctctctcatactcacat---------ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattatagttgt 357  Q
    ||||||||||||||||||||||||||         ||||||| |||||||||||||||||| ||||||||||| | ||||||||| |||||||| |||||    
T  40316974 gacaattttctctctcatactcacattactttttactttatctctctattgctttggttttcgtgcaaataccaactttttctttataaattatggttgt 40316875  T
Q  358 c 358  Q
    |    
T  40316874 c 40316874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 231 - 358
Target Start/End: Complemental strand, 47215796 - 47215660
Alignment:
Q  231 aatgatatttgaacattcatc-aatgacaatttttgtgacaattttctctctcatactcacat--------ctttatcactctattgctttggtttttgt 321  Q
    ||||||||||||||||  ||  |||||||| ||||||||||||||||||||||||||||||||         |||||  |||||||| ||| ||||  ||    
T  47215796 aatgatatttgaacatctatataatgacaacttttgtgacaattttctctctcatactcacattatttttattttatttctctattgttttagtttccgt 47215697  T
Q  322 gcaaatacctattttttctttgtaaattatagttgtc 358  Q
    |||||||| |||||||||||| |||||||| ||||||    
T  47215696 gcaaatacatattttttctttataaattatggttgtc 47215660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 261 - 351
Target Start/End: Complemental strand, 50781606 - 50781507
Alignment:
Q  261 ttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattat 351  Q
    |||| |||||| ||||||||||||||||||||         ||||||| |||||||||||||||||| ||||||||||| ||||||||||| ||||||||    
T  50781606 ttttatgacaactttctctctcatactcacattactttttactttatctctctattgctttggttttcgtgcaaataccaattttttctttataaattat 50781507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 230 - 358
Target Start/End: Complemental strand, 52714969 - 52714831
Alignment:
Q  230 aaatgatatttgaacattcatca-atgacaatttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttggttttt 319  Q
    ||||||||||||||||| |||   || |||| ||||||||||||||||| |||||||||||| |         ||||||| |||||||| |||||||||     
T  52714969 aaatgatatttgaacatccattttataacaacttttgtgacaattttctttctcatactcacgttactttttactttatctctctattgttttggttttc 52714870  T
Q  320 gtgcaaatacctattttttctttgtaaattatagttgtc 358  Q
    |||||| |||| | |||||||||||||||||| ||||||    
T  52714869 gtgcaattaccaactttttctttgtaaattattgttgtc 52714831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 293 - 358
Target Start/End: Original strand, 35136920 - 35136985
Alignment:
Q  293 ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattatagttgtc 358  Q
    ||||||| ||||||||||||| |||||||||||||||  | |||||||||||||||||| ||||||    
T  35136920 ctttatctctctattgctttgatttttgtgcaaatacaaactttttctttgtaaattatggttgtc 35136985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 230 - 358
Target Start/End: Original strand, 26967213 - 26967350
Alignment:
Q  230 aaatgatatttgaacattcatc-aatgacaatttttgtgacaattttctctctcatactcacatc--------tttatcactctattgctttggtttttg 320  Q
    |||||||||||||||||| ||  |||||||| ||||||||||| ||||||||||| | ||||||         |||||| |||||||| ||||||||       
T  26967213 aaatgatatttgaacattaatttaatgacaacttttgtgacaactttctctctcacattcacattatttttattttatctctctattgttttggtttcca 26967312  T
Q  321 tgcaaatacctattttttctttgtaaattatagttgtc 358  Q
    |||||||||||| ||||||||| |||||||| ||||||    
T  26967313 tgcaaatacctactttttctttataaattatggttgtc 26967350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 230 - 351
Target Start/End: Complemental strand, 33125391 - 33125262
Alignment:
Q  230 aaatgatatttgaacattcatca-atgacaatttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttggttttt 319  Q
    ||||||||||||||||| |||   |||| |||||||||||||||||||| ||  ||||||||||         |||||||  ||||||||||||||||||    
T  33125391 aaatgatatttgaacatccattttatgataatttttgtgacaattttctttc--atactcacattactttttactttatctttctattgctttggttttt 33125294  T
Q  320 gtgcaaatacctattttttctttgtaaattat 351  Q
     |||||||||||| ||||||||| ||||||||    
T  33125293 atgcaaatacctactttttctttataaattat 33125262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 230 - 357
Target Start/End: Complemental strand, 46172474 - 46172338
Alignment:
Q  230 aaatgatatttgaacattcatcaatgacaatttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttggtttttg 320  Q
    ||||||||||||||||| ||| | |||||| |||||| | |||||||||||||||||||||||          |||||| |||||||||| | ||||| |    
T  46172474 aaatgatatttgaacatccattagtgacaacttttgtaataattttctctctcatactcacattattttttattttatctctctattgctatagttttcg 46172375  T
Q  321 tgcaaatacctattttttctttgtaaattatagttgt 357  Q
    ||| ||||||  ||||||||||||||| | |||||||    
T  46172374 tgccaataccacttttttctttgtaaaatttagttgt 46172338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 261 - 363
Target Start/End: Original strand, 15015433 - 15015544
Alignment:
Q  261 ttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattat 351  Q
    ||||||||||| ||||||||||||||| ||||         ||||||  |||||||| ||||||||| ||||||||||| | ||||||||||||||||||    
T  15015433 ttttgtgacaactttctctctcatacttacattattttttactttatatctctattgttttggttttcgtgcaaataccaactttttctttgtaaattat 15015532  T
Q  352 agttgtctcata 363  Q
     |||||| ||||    
T  15015533 ggttgtcccata 15015544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 293 - 351
Target Start/End: Complemental strand, 3226055 - 3225997
Alignment:
Q  293 ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattat 351  Q
    ||||||| |||||||||||||||||| || ||||||  |||||||||||||||||||||    
T  3226055 ctttatctctctattgctttggttttcgtacaaatatatattttttctttgtaaattat 3225997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 293 - 351
Target Start/End: Complemental strand, 4469423 - 4469365
Alignment:
Q  293 ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattat 351  Q
    ||||||| ||| ||||||||||||| |||| |||||| |||||||||||||||||||||    
T  4469423 ctttatctctcaattgctttggtttctgtgtaaatacatattttttctttgtaaattat 4469365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 261 - 358
Target Start/End: Complemental strand, 19969598 - 19969492
Alignment:
Q  261 ttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattat 351  Q
    |||| |||||| ||||||||||||||||||||         ||||||| |||||||||||||||||| ||||| ||||| |  |||||||||||||||||    
T  19969598 ttttatgacaactttctctctcatactcacattactttttactttatctctctattgctttggttttcgtgcacataccaacgttttctttgtaaattat 19969499  T
Q  352 agttgtc 358  Q
     ||||||    
T  19969498 ggttgtc 19969492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 230 - 342
Target Start/End: Complemental strand, 33054156 - 33054034
Alignment:
Q  230 aaatgatatttgaacattcatcaa-tgacaatttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttggttttt 319  Q
    |||||||||||||||||||||    |||||| |||||  |||| ||||||||||||||||||||         ||||||| |||||| |||||| |||||    
T  33054156 aaatgatatttgaacattcattttgtgacaacttttgctacaactttctctctcatactcacattattttttactttatctctctatggctttgattttt 33054057  T
Q  320 gtgcaaatacctattttttcttt 342  Q
    ||||||||||||||| |||||||    
T  33054056 gtgcaaatacctattctttcttt 33054034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 254 - 351
Target Start/End: Original strand, 38713598 - 38713704
Alignment:
Q  254 tgacaatttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgt 344  Q
    |||||||||||||||||| ||||||||||||| ||| ||         ||||||| || |||||||||| |||| ||||||||||| ||||||||||| |    
T  38713598 tgacaatttttgtgacaactttctctctcatattcatattattttttactttatctctttattgctttgattttcgtgcaaatacccattttttctttat 38713697  T
Q  345 aaattat 351  Q
    |||||||    
T  38713698 aaattat 38713704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 302 - 359
Target Start/End: Original strand, 6143768 - 6143825
Alignment:
Q  302 tctattgctttggtttttgtgcaaatacctattttttctttgtaaattatagttgtct 359  Q
    |||| ||| |||||||| ||||||||||||| |||||||||||||||||| |||||||    
T  6143768 tctagtgcattggttttcgtgcaaatacctactttttctttgtaaattatggttgtct 6143825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 261 - 363
Target Start/End: Complemental strand, 33358195 - 33358083
Alignment:
Q  261 ttttgtgacaattttctctctcatactcacat----------ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaatta 350  Q
    ||||||||||| ||||||||||||||||||||          ||||||| ||| |||| |||| |||| ||||||||||| | |||||||||||||||||    
T  33358195 ttttgtgacaactttctctctcatactcacattatttttttactttatctctcaattgatttgattttcgtgcaaatacccactttttctttgtaaatta 33358096  T
Q  351 tagttgtctcata 363  Q
    | |||||| ||||    
T  33358095 tggttgtcacata 33358083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 294 - 363
Target Start/End: Original strand, 45417849 - 45417918
Alignment:
Q  294 tttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattatagttgtctcata 363  Q
    |||||| |||||||| |||| |||| |||||||||| |||||||||||| |||||||| |||||| ||||    
T  45417849 tttatctctctattgttttgattttcgtgcaaatacatattttttctttataaattatggttgtcacata 45417918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 293 - 358
Target Start/End: Original strand, 48326044 - 48326109
Alignment:
Q  293 ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattatagttgtc 358  Q
    ||||||| ||||||||||||| |||| || |||||||| | |||||||||||||||||| ||||||    
T  48326044 ctttatctctctattgctttgattttcgtacaaataccaactttttctttgtaaattatggttgtc 48326109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 262 - 363
Target Start/End: Original strand, 29154816 - 29154924
Alignment:
Q  262 tttgtgacaattttctctctcatactcacatc----ttta-tcactctat--tgctttggtttttgtgcaaatacctattttttctttgtaaattatagt 354  Q
    |||||||||| ||||||||||||||||||||     |||| | |||||||  || ||||||||| |||||||||||||  ||||||||||||||||| ||    
T  29154816 tttgtgacaactttctctctcatactcacattattttttacttactctatattgttttggttttcgtgcaaatacctacgttttctttgtaaattatcgt 29154915  T
Q  355 tgtctcata 363  Q
    |||| ||||    
T  29154916 tgtcccata 29154924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 262 - 361
Target Start/End: Complemental strand, 49241540 - 49241432
Alignment:
Q  262 tttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattata 352  Q
    |||||||||| ||||||||||||||||||||         |||||||  |||||||| |||||||| ||||||||||||| ||||  ||||||||||||     
T  49241540 tttgtgacaactttctctctcatactcacattattttttactttatctgtctattgcattggttttcgtgcaaatacctacttttcttttgtaaattatg 49241441  T
Q  353 gttgtctca 361  Q
     ||||||||    
T  49241440 attgtctca 49241432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 261 - 351
Target Start/End: Original strand, 8447771 - 8447870
Alignment:
Q  261 ttttgtgacaattttctctctcatactcacatc---------tttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattat 351  Q
    ||||||||||| ||||||||| |||||||||||         |||||| |||||||| ||| ||||||||||||||| | | ||||||||||||||||||    
T  8447771 ttttgtgacaactttctctcttatactcacatcattttttactttatctctctattgttttagtttttgtgcaaatatcaactttttctttgtaaattat 8447870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 293 - 368
Target Start/End: Complemental strand, 35539268 - 35539193
Alignment:
Q  293 ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattatagttgtctcatagttgt 368  Q
    ||||||| |||| ||| ||||||||  |||||||||| || ||||||||||||||||||| ||||| || ||||||    
T  35539268 ctttatctctctgttgttttggtttccgtgcaaatacatactttttctttgtaaattatatttgtcacaaagttgt 35539193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 225 - 358
Target Start/End: Complemental strand, 36577485 - 36577342
Alignment:
Q  225 atgaaaaatgatatttgaacattcatcaa-tgacaatttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttgg 314  Q
    |||| ||||||||||||||||| |||    |||||| |||||  |||| ||||||||||||||||||||         ||||||| || ||||||||||     
T  36577485 atgagaaatgatatttgaacatccattttgtgacaacttttgcaacaactttctctctcatactcacattactttttactttatctctttattgctttga 36577386  T
Q  315 tttttgtgcaaatacctattttttctttgtaaattatagttgtc 358  Q
    |||| ||||||||||| | ||||||||| |||||||| ||||||    
T  36577385 ttttcgtgcaaataccaactttttctttataaattatggttgtc 36577342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 261 - 343
Target Start/End: Complemental strand, 48220180 - 48220089
Alignment:
Q  261 ttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttggtttttgtgcaaatacctattttttctttg 343  Q
    ||||||||||| ||||||||||||||||||||         ||||||| ||||||| ||||| |||||||||||||||| | ||||||||||    
T  48220180 ttttgtgacaactttctctctcatactcacattattttttactttatctctctatttctttgatttttgtgcaaataccaactttttctttg 48220089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 254 - 322
Target Start/End: Complemental strand, 50775200 - 50775122
Alignment:
Q  254 tgacaatttttgtgacaattttctctctcatactcacat----------ctttatcactctattgctttggtttttgtg 322  Q
    |||||||||||||||||| ||||||||||||||||||||          ||||||| ||||||||||||||||||||||    
T  50775200 tgacaatttttgtgacaactttctctctcatactcacattatgtttttactttatctctctattgctttggtttttgtg 50775122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 230 - 292
Target Start/End: Complemental strand, 51286435 - 51286372
Alignment:
Q  230 aaatgatatttgaacattcatca-atgacaatttttgtgacaattttctctctcatactcacat 292  Q
    |||||||||||||||||| ||   ||||||| ||||||||||| ||||||||||||||||||||    
T  51286435 aaatgatatttgaacatttattttatgacaacttttgtgacaactttctctctcatactcacat 51286372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 301 - 358
Target Start/End: Complemental strand, 4509457 - 4509399
Alignment:
Q  301 ctctattgctttggttttt-gtgcaaatacctattttttctttgtaaattatagttgtc 358  Q
    ||||||||||||  ||||| || |||||||||| |||||||||||||||||||||||||    
T  4509457 ctctattgcttttttttttcgtacaaatacctactttttctttgtaaattatagttgtc 4509399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 258 - 292
Target Start/End: Original strand, 8846005 - 8846039
Alignment:
Q  258 aatttttgtgacaattttctctctcatactcacat 292  Q
    |||||||||||||||||||||||||||||||||||    
T  8846005 aatttttgtgacaattttctctctcatactcacat 8846039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 230 - 358
Target Start/End: Complemental strand, 44789211 - 44789074
Alignment:
Q  230 aaatgatatttgaacattcatcaa-tgacaatttttgtgacaattttctctctcatactcacatc---------tttatcactctattgctttggttttt 319  Q
    ||||||||||||||||| |||    |||||| |||||| |||| ||||||| |||||||||||||         |||||| ||||||||||||| ||||     
T  44789211 aaatgatatttgaacatccattttgtgacaacttttgttacaactttctctttcatactcacatcattttttactttatctctctattgctttgattttc 44789112  T
Q  320 gtgcaaatacctattttttctttgtaaattatagttgtc 358  Q
    |||||| ||||||||||||||||| ||||| | ||||||    
T  44789111 gtgcaa-tacctattttttctttgcaaattttggttgtc 44789074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 230 - 358
Target Start/End: Complemental strand, 46543510 - 46543373
Alignment:
Q  230 aaatgatatttgaacattcatca-atgacaatttttgtgacaattttctctctcatactcaca---------tctttatcactctattgctttggttttt 319  Q
    ||||||||||||||||| |||   |||| ||| ||||||| ||||||||||||||||||||||          ||||||| ||||||||||||||||||     
T  46543510 aaatgatatttgaacatccattttatgataatctttgtgataattttctctctcatactcacactattttttactttatctctctattgctttggttttc 46543411  T
Q  320 gtgcaaatacctattttttctttgtaaattatagttgtc 358  Q
    ||||||||| | | ||||| ||| ||||||||| |||||    
T  46543410 gtgcaaatatcaacttttt-tttttaaattataattgtc 46543373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 293 - 363
Target Start/End: Original strand, 47721485 - 47721555
Alignment:
Q  293 ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattatagttgtctcata 363  Q
    ||||||| ||||||||||||| |||| |||  ||||| || |||||||||||||||||| |||||| ||||    
T  47721485 ctttatctctctattgctttgattttcgtgtcaatacttactttttctttgtaaattatggttgtcccata 47721555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 293 - 363
Target Start/End: Original strand, 47728477 - 47728547
Alignment:
Q  293 ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattatagttgtctcata 363  Q
    ||||||| ||||||||||||| |||| |||  ||||| || |||||||||||||||||| |||||| ||||    
T  47728477 ctttatctctctattgctttgattttcgtgtcaatacttactttttctttgtaaattatggttgtcccata 47728547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 293 - 363
Target Start/End: Original strand, 48624952 - 48625022
Alignment:
Q  293 ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattatagttgtctcata 363  Q
    ||||||| ||||||||||||| ||||  ||||||||| || ||||||||| |||||||| ||||| |||||    
T  48624952 ctttatctctctattgctttgattttcatgcaaatacatactttttctttataaattatggttgtttcata 48625022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 306 - 363
Target Start/End: Complemental strand, 2211174 - 2211117
Alignment:
Q  306 ttgctttggtttttgtgcaaatacctattttttctttgtaaattatagttgtctcata 363  Q
    ||||||| |||||||| |||||||||||| |||||||||||| ||| | |||||||||    
T  2211174 ttgctttagtttttgtacaaatacctattgtttctttgtaaactatggctgtctcata 2211117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 230 - 357
Target Start/End: Complemental strand, 8411786 - 8411649
Alignment:
Q  230 aaatgatatttgaacattcatcaa-tgacaatttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttggttttt 319  Q
    ||||||||||||||||| |||  | |||||| |||||  |||| ||||||||||||||||||||         ||||||| |||||||| ||||||||      
T  8411786 aaatgatatttgaacatccatttagtgacaacttttgcaacaactttctctctcatactcacattattttttactttatctctctattgttttggtttcc 8411687  T
Q  320 gtgcaaatacctattttttctttgtaaattatagttgt 357  Q
    |||| ||||||  ||||||||||||||| ||| |||||    
T  8411686 gtgccaataccacttttttctttgtaaaatatggttgt 8411649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 230 - 287
Target Start/End: Complemental strand, 15083118 - 15083061
Alignment:
Q  230 aaatgatatttgaacattcatcaatgacaatttttgtgacaattttctctctcatact 287  Q
    ||||||||||||||||  |||   |||||| |||||||||||||||||||||||||||    
T  15083118 aaatgatatttgaacaaccatttttgacaacttttgtgacaattttctctctcatact 15083061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 293 - 358
Target Start/End: Complemental strand, 30658843 - 30658779
Alignment:
Q  293 ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattatagttgtc 358  Q
    ||||||| ||||||||||||| |||| |||||| ||||||||||||||||| ||||| | ||||||    
T  30658843 ctttatctctctattgctttgattttcgtgcaa-tacctattttttctttgcaaattttggttgtc 30658779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 292
Target Start/End: Original strand, 1689421 - 1689457
Alignment:
Q  256 acaatttttgtgacaattttctctctcatactcacat 292  Q
    |||||||||||||||| ||||||||||||||||||||    
T  1689421 acaatttttgtgacaactttctctctcatactcacat 1689457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 358
Target Start/End: Original strand, 3603108 - 3603252
Alignment:
Q  224 aatgaaaaatgatatttgaacattcatcaa-tgacaatttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttg 313  Q
    ||||| ||||||||||||||||| |||  | |||||| |||||  |||| ||||||||||||||||||||          |||||| |||||||||| ||    
T  3603108 aatgagaaatgatatttgaacatccatttagtgacaacttttgcaacaactttctctctcatactcacattactttttagtttatctctctattgctatg 3603207  T
Q  314 gtttttgtgcaaatacctattttttctttgtaaattatagttgtc 358  Q
    ||||  |||| ||||||  ||||||||||||||| ||| ||||||    
T  3603208 gtttccgtgccaataccacttttttctttgtaaaatatggttgtc 3603252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 254 - 363
Target Start/End: Complemental strand, 29147916 - 29147799
Alignment:
Q  254 tgacaatttttgtgacaattttctctctcatactcacatc--------tttatcactctattgctttggtttttgtgcaaatacctattttttctttgta 345  Q
    |||||| ||||||||||| ||||||||| |||||||| ||        |||||| |||||||| ||||||||  |||||||||  || |||| |||||||    
T  29147916 tgacaacttttgtgacaactttctctcttatactcacgtcatttttactttatctctctattgttttggtttccgtgcaaatatttacttttcctttgta 29147817  T
Q  346 aattatagttgtctcata 363  Q
    |||||| |||||| ||||    
T  29147816 aattatggttgtcacata 29147799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 292
Target Start/End: Original strand, 30536021 - 30536057
Alignment:
Q  256 acaatttttgtgacaattttctctctcatactcacat 292  Q
    |||||||||||||||| ||||||||||||||||||||    
T  30536021 acaatttttgtgacaactttctctctcatactcacat 30536057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 292
Target Start/End: Original strand, 37685328 - 37685396
Alignment:
Q  224 aatgaaaaatgatatttgaacattcatcaatgacaatttttgtgacaattttctctctcatactcacat 292  Q
    ||||| ||||||||||||||||  |||   | |||| ||||||||||| ||||||||||||||||||||    
T  37685328 aatgagaaatgatatttgaacaaccattttttacaacttttgtgacaactttctctctcatactcacat 37685396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 292
Target Start/End: Complemental strand, 37700190 - 37700122
Alignment:
Q  224 aatgaaaaatgatatttgaacattcatcaatgacaatttttgtgacaattttctctctcatactcacat 292  Q
    ||||| ||||||||||||||||  |||   | |||| ||||||||||| ||||||||||||||||||||    
T  37700190 aatgagaaatgatatttgaacaaccattttttacaacttttgtgacaactttctctctcatactcacat 37700122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 261 - 358
Target Start/End: Complemental strand, 41507231 - 41507124
Alignment:
Q  261 ttttgtgacaattttctctctcatactcacat----------ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaatta 350  Q
    ||||||||||| ||||||||||||||||||||          |||||||  ||||||  |||||||||  ||  |||||||| |||||||||||||||||    
T  41507231 ttttgtgacaactttctctctcatactcacattatgttcttactttatctatctattattttggttttcatgtcaatacctactttttctttgtaaatta 41507132  T
Q  351 tagttgtc 358  Q
    ||||||||    
T  41507131 tagttgtc 41507124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 258 - 349
Target Start/End: Original strand, 46281468 - 46281568
Alignment:
Q  258 aatttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaat 348  Q
    |||||||||||||| ||||||||||||||||||||         ||||||| ||||||||||||| ||||  ||| || ||||| |||| ||||||||||    
T  46281468 aatttttgtgacaactttctctctcatactcacatatgtttttactttatctctctattgctttgattttcatgccaaaacctacttttcctttgtaaat 46281567  T
Q  349 t 349  Q
    |    
T  46281568 t 46281568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 349
Target Start/End: Original strand, 46911369 - 46911424
Alignment:
Q  293 ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaatt 349  Q
    ||||||| ||||||||||||| |||| |||| ||||||||||||||||||| |||||    
T  46911369 ctttatctctctattgctttgattttcgtgc-aatacctattttttctttgcaaatt 46911424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 230 - 292
Target Start/End: Complemental strand, 5771816 - 5771753
Alignment:
Q  230 aaatgatatttgaacattca-tcaatgacaatttttgtgacaattttctctctcatactcacat 292  Q
    |||||||||||||||| ||| |   ||| |||||||||||||| ||||||||||||||||||||    
T  5771816 aaatgatatttgaacaatcactttttgataatttttgtgacaactttctctctcatactcacat 5771753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 230 - 292
Target Start/End: Complemental strand, 7171304 - 7171241
Alignment:
Q  230 aaatgatatttgaacattcatc-aatgacaatttttgtgacaattttctctctcatactcacat 292  Q
    |||||||||||||||||  ||  |||||||| ||||||||||| ||| ||||||||||||||||    
T  7171304 aaatgatatttgaacatctatttaatgacaacttttgtgacaactttatctctcatactcacat 7171241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 254 - 322
Target Start/End: Complemental strand, 9567004 - 9566926
Alignment:
Q  254 tgacaatttttgtgacaattttctctctcatactcacat----------ctttatcactctattgctttggtttttgtg 322  Q
    |||||| ||||||||||| ||||||||||||||||||||          |||| |||||||||||||||||||||||||    
T  9567004 tgacaacttttgtgacaactttctctctcatactcacattatgtttttactttctcactctattgctttggtttttgtg 9566926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 230 - 292
Target Start/End: Original strand, 16986941 - 16987004
Alignment:
Q  230 aaatgatatttgaacattcatcaa-tgacaatttttgtgacaattttctctctcatactcacat 292  Q
    |||||||||||||||||||||    ||| |||| ||||||||| ||||||||||||||||||||    
T  16986941 aaatgatatttgaacattcatttggtgataattattgtgacaactttctctctcatactcacat 16987004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 253 - 292
Target Start/End: Original strand, 47214235 - 47214274
Alignment:
Q  253 atgacaatttttgtgacaattttctctctcatactcacat 292  Q
    ||||||| ||||||||||| ||||||||||||||||||||    
T  47214235 atgacaacttttgtgacaactttctctctcatactcacat 47214274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 261 - 351
Target Start/End: Complemental strand, 50882146 - 50882047
Alignment:
Q  261 ttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattat 351  Q
    ||||||||||||||||||||||||| | ||||         ||||||| ||||||| ||||| |||| ||||||||||  ||||||||||| ||||||||    
T  50882146 ttttgtgacaattttctctctcatatttacattattttttactttatctctctattactttgattttcgtgcaaatactcattttttctttataaattat 50882047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 230 - 358
Target Start/End: Original strand, 756859 - 756997
Alignment:
Q  230 aaatgatatttgaacattcatcaa-tgacaatttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttggttttt 319  Q
    ||||||||||||||||| |||  | |||||| |||||  |||| ||||| ||||||||||||||         ||||||| |||||||||| ||||||      
T  756859 aaatgatatttgaacatccatttagtgacaacttttgcaacaactttctttctcatactcacattattttttactttatctctctattgctatggtttcc 756958  T
Q  320 gtgcaaatacctattttttctttgtaaattatagttgtc 358  Q
    |||| ||||||  ||||||||||||||| ||| ||||||    
T  756959 gtgccaataccatttttttctttgtaaagtatggttgtc 756997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 230 - 292
Target Start/End: Complemental strand, 8350264 - 8350202
Alignment:
Q  230 aaatgatatttgaacattcatcaatgacaatttttgtgacaattttctctctcatactcacat 292  Q
    ||||||||||||||||  |||   | |||| ||||||||||| ||||||||||||||||||||    
T  8350264 aaatgatatttgaacaaccattttttacaacttttgtgacaactttctctctcatactcacat 8350202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 230 - 292
Target Start/End: Original strand, 12657225 - 12657287
Alignment:
Q  230 aaatgatatttgaacattcatcaatgacaatttttgtgacaattttctctctcatactcacat 292  Q
    |||||||||||||||| ||||   | |||||||||| || || ||||||||||||||||||||    
T  12657225 aaatgatatttgaacaatcattttttacaatttttgagataactttctctctcatactcacat 12657287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 226 - 292
Target Start/End: Original strand, 29359638 - 29359704
Alignment:
Q  226 tgaaaaatgatatttgaacattcatcaatgacaatttttgtgacaattttctctctcatactcacat 292  Q
    |||||||||||||||||||| ||||   | | || |||||| |||| ||||||||||||||||||||    
T  29359638 tgaaaaatgatatttgaacaatcattttttataacttttgtaacaactttctctctcatactcacat 29359704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 230 - 292
Target Start/End: Original strand, 35369703 - 35369765
Alignment:
Q  230 aaatgatatttgaacattcatcaatgacaatttttgtgacaattttctctctcatactcacat 292  Q
    |||||||||||||||| ||||   | |||| ||||||||||| ||||| ||||||||||||||    
T  35369703 aaatgatatttgaacaatcattttttacaacttttgtgacaactttctatctcatactcacat 35369765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 293 - 367
Target Start/End: Complemental strand, 35539354 - 35539280
Alignment:
Q  293 ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattatagttgtctcatagttg 367  Q
    ||||||| || ||||| ||| ||||  |||||||||| || |||||||||||||||||| |||||| || |||||    
T  35539354 ctttatctctttattgttttagtttccgtgcaaatacttaatttttctttgtaaattatggttgtcacaaagttg 35539280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 258 - 292
Target Start/End: Complemental strand, 40328780 - 40328746
Alignment:
Q  258 aatttttgtgacaattttctctctcatactcacat 292  Q
    ||||||||||| |||||||||||||||||||||||    
T  40328780 aatttttgtgataattttctctctcatactcacat 40328746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 302 - 363
Target Start/End: Original strand, 43769703 - 43769765
Alignment:
Q  302 tctattgctttggtttttgtgcaaatacctattttttctttgtaaatt-atagttgtctcata 363  Q
    |||||||||||||||||| || |||||| || ||||||||| |||||| || |||||||||||    
T  43769703 tctattgctttggtttttctgaaaatacttactttttctttataaattaatggttgtctcata 43769765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 230 - 358
Target Start/End: Complemental strand, 46082189 - 46082051
Alignment:
Q  230 aaatgatatttgaacattcatcaa-tgacaatttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttggttttt 319  Q
    ||||||||||||||||| |||  | |||||| |||||  |||| |||||||| |||||||||||         ||||||| |||||||||| ||||||      
T  46082189 aaatgatatttgaacatccatttagtgacaacttttgcaacaactttctctcgcatactcacattactttttactttatctctctattgctatggtttcc 46082090  T
Q  320 gtgcaaatacctattttttctttgtaaattatagttgtc 358  Q
    |||  ||||||  ||||||||||||||| ||||||||||    
T  46082089 gtgtcaataccacttttttctttgtaaaatatagttgtc 46082051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 262 - 292
Target Start/End: Original strand, 48470674 - 48470704
Alignment:
Q  262 tttgtgacaattttctctctcatactcacat 292  Q
    |||||||||||||||||||||||||||||||    
T  48470674 tttgtgacaattttctctctcatactcacat 48470704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 254 - 292
Target Start/End: Original strand, 48858851 - 48858889
Alignment:
Q  254 tgacaatttttgtgacaattttctctctcatactcacat 292  Q
    |||||| ||||||||||| ||||||||||||||||||||    
T  48858851 tgacaacttttgtgacaactttctctctcatactcacat 48858889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 254 - 292
Target Start/End: Complemental strand, 48983711 - 48983673
Alignment:
Q  254 tgacaatttttgtgacaattttctctctcatactcacat 292  Q
    |||||| ||||||||||| ||||||||||||||||||||    
T  48983711 tgacaacttttgtgacaactttctctctcatactcacat 48983673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 258 - 292
Target Start/End: Original strand, 52437526 - 52437560
Alignment:
Q  258 aatttttgtgacaattttctctctcatactcacat 292  Q
    |||||||||||||| ||||||||||||||||||||    
T  52437526 aatttttgtgacaactttctctctcatactcacat 52437560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 293 - 358
Target Start/End: Original strand, 7128194 - 7128259
Alignment:
Q  293 ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattatagttgtc 358  Q
    ||||||| |||||||||| ||||||  |||| ||||||  ||||||||||||||| ||| ||||||    
T  7128194 ctttatctctctattgctatggtttccgtgccaataccacttttttctttgtaaagtatggttgtc 7128259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 301 - 358
Target Start/End: Original strand, 25259167 - 25259224
Alignment:
Q  301 ctctattgctttggtttttgtgcaaatacctattttttctttgtaaattatagttgtc 358  Q
    |||||||| |||| ||||  |||||||||| ||||||||||| |||||||| ||||||    
T  25259167 ctctattgttttgattttcatgcaaataccaattttttctttataaattatggttgtc 25259224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 228 - 292
Target Start/End: Original strand, 29585994 - 29586059
Alignment:
Q  228 aaaaatgatatttgaacattcatc-aatgacaatttttgtgacaattttctctctcatactcacat 292  Q
    |||||||||||||||||||  ||  ||| |||| |||||  |||||||||||||||||||||||||    
T  29585994 aaaaatgatatttgaacatctatttaataacaacttttgcaacaattttctctctcatactcacat 29586059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 230 - 287
Target Start/End: Original strand, 45333573 - 45333630
Alignment:
Q  230 aaatgatatttgaacattcatcaatgacaatttttgtgacaattttctctctcatact 287  Q
    |||||||||||||||| ||||   | |||| ||||||||||| |||||||||||||||    
T  45333573 aaatgatatttgaacaatcattttttacaacttttgtgacaactttctctctcatact 45333630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 293 - 358
Target Start/End: Original strand, 50433845 - 50433910
Alignment:
Q  293 ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattatagttgtc 358  Q
    ||||||| |||||||||||||  ||  || |||||||||| ||||||||| |||||||| ||||||    
T  50433845 ctttatctctctattgctttgacttccgtacaaatacctactttttctttataaattatggttgtc 50433910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 255 - 292
Target Start/End: Complemental strand, 51436814 - 51436777
Alignment:
Q  255 gacaatttttgtgacaattttctctctcatactcacat 292  Q
    ||||||||||||||||| ||| ||||||||||||||||    
T  51436814 gacaatttttgtgacaactttatctctcatactcacat 51436777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 256 - 292
Target Start/End: Original strand, 649798 - 649834
Alignment:
Q  256 acaatttttgtgacaattttctctctcatactcacat 292  Q
    |||| ||||||||||| ||||||||||||||||||||    
T  649798 acaacttttgtgacaactttctctctcatactcacat 649834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 256 - 292
Target Start/End: Complemental strand, 740997 - 740961
Alignment:
Q  256 acaatttttgtgacaattttctctctcatactcacat 292  Q
    |||| |||||||||| |||||||||||||||||||||    
T  740997 acaacttttgtgacatttttctctctcatactcacat 740961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 256 - 292
Target Start/End: Original strand, 2492443 - 2492479
Alignment:
Q  256 acaatttttgtgacaattttctctctcatactcacat 292  Q
    |||| |||||||| |||||||||||||||||||||||    
T  2492443 acaacttttgtgataattttctctctcatactcacat 2492479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 294 - 358
Target Start/End: Complemental strand, 21093352 - 21093288
Alignment:
Q  294 tttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattatagttgtc 358  Q
    |||||| ||||||||||||| |||| ||   |||| ||| |||||||||||||||||| ||||||    
T  21093352 tttatctctctattgctttgattttcgtattaatatctactttttctttgtaaattatggttgtc 21093288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 256 - 292
Target Start/End: Complemental strand, 27465099 - 27465063
Alignment:
Q  256 acaatttttgtgacaattttctctctcatactcacat 292  Q
    |||| ||||||||||| ||||||||||||||||||||    
T  27465099 acaacttttgtgacaactttctctctcatactcacat 27465063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 261 - 293
Target Start/End: Complemental strand, 45065938 - 45065906
Alignment:
Q  261 ttttgtgacaattttctctctcatactcacatc 293  Q
    ||||||||||| |||||||||||||||||||||    
T  45065938 ttttgtgacaactttctctctcatactcacatc 45065906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 230 - 293
Target Start/End: Complemental strand, 47820569 - 47820505
Alignment:
Q  230 aaatgatatttgaacattcatca-atgacaatttttgtgacaattttctctctcatactcacatc 293  Q
    ||||||||||||||||| |||   ||||||| |||||| |||| ||||||| |||||||||||||    
T  47820569 aaatgatatttgaacatccattttatgacaacttttgttacaactttctctttcatactcacatc 47820505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 256 - 292
Target Start/End: Complemental strand, 49020445 - 49020409
Alignment:
Q  256 acaatttttgtgacaattttctctctcatactcacat 292  Q
    |||| ||||||||||||||| ||||||||||||||||    
T  49020445 acaacttttgtgacaattttttctctcatactcacat 49020409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 56; Significance: 5e-23; HSPs: 97)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 255 - 357
Target Start/End: Complemental strand, 38338964 - 38338853
Alignment:
Q  255 gacaatttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgta 345  Q
    ||||| ||||||||||| ||||||||||||||||||||         ||||||| ||||||||||||| |||||||||||||||||||||||||||| ||    
T  38338964 gacaacttttgtgacaactttctctctcatactcacattactttttactttatctctctattgctttgatttttgtgcaaatacctattttttctttata 38338865  T
Q  346 aattatagttgt 357  Q
    |||||| |||||    
T  38338864 aattatggttgt 38338853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 230 - 361
Target Start/End: Complemental strand, 39345048 - 39344907
Alignment:
Q  230 aaatgatatttgaacattcatcaa-tgacaatttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttggttttt 319  Q
    ||||||||||||||||| |||    ||||||||||||  |||| ||||||||||||||||||||         ||||||| ||||||||||||||||||     
T  39345048 aaatgatatttgaacatccattttgtgacaatttttgcaacaactttctctctcatactcacattactttttactttatctctctattgctttggttttc 39344949  T
Q  320 gtgcaaatacctattttttctttgtaaattatagttgtctca 361  Q
    ||||||||||| ||||||||||||||||||||  ||||||||    
T  39344948 gtgcaaataccaattttttctttgtaaattatgattgtctca 39344907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 230 - 358
Target Start/End: Original strand, 33860650 - 33860787
Alignment:
Q  230 aaatgatatttgaacattcatcaa-tgacaatttttgtgacaattttctctctcatactcacatc--------tttatcactctattgctttggtttttg 320  Q
    ||||||||||||||||| |||    |||||||||||||||||| |||||||||||||||||||||        |||||| |||||||| ||||||||  |    
T  33860650 aaatgatatttgaacatccatttggtgacaatttttgtgacaactttctctctcatactcacatcatttttactttatctctctattgttttggtttccg 33860749  T
Q  321 tgcaaatacctattttttctttgtaaattatagttgtc 358  Q
    ||||||||| || |||||||||||||||||| ||||||    
T  33860750 tgcaaatacttactttttctttgtaaattatcgttgtc 33860787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 261 - 368
Target Start/End: Complemental strand, 28657477 - 28657361
Alignment:
Q  261 ttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattat 351  Q
    ||||||||||| ||||||||||||||||||||         ||||||| |||||||||||||||||  |||||||||||||  |||||||||||||||||    
T  28657477 ttttgtgacaactttctctctcatactcacattattttttactttatctctctattgctttggtttccgtgcaaatacctacgttttctttgtaaattat 28657378  T
Q  352 agttgtctcatagttgt 368  Q
     |||||| || ||||||    
T  28657377 ggttgtcacaaagttgt 28657361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 294 - 358
Target Start/End: Original strand, 56271437 - 56271501
Alignment:
Q  294 tttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattatagttgtc 358  Q
    |||||| |||||||||||||||||| ||||||||||||| |||||||||||||||||| ||||||    
T  56271437 tttatctctctattgctttggttttcgtgcaaatacctactttttctttgtaaattatggttgtc 56271501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 230 - 358
Target Start/End: Original strand, 13139151 - 13139289
Alignment:
Q  230 aaatgatatttgaacattcatca-atgacaatttttgtgacaattttctctctcatactcacatc---------tttatcactctattgctttggttttt 319  Q
    ||||||||||||||||| |||   |||| ||||||| |||||| ||||||||||||||||||||          |||||| |||||||  |||||||||     
T  13139151 aaatgatatttgaacatccattttatgataatttttatgacaactttctctctcatactcacattaccttttaatttatctctctatttttttggttttc 13139250  T
Q  320 gtgcaaatacctattttttctttgtaaattatagttgtc 358  Q
    ||||||||||| | |||||||||||||||||||||||||    
T  13139251 gtgcaaataccaactttttctttgtaaattatagttgtc 13139289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 293 - 357
Target Start/End: Original strand, 12138929 - 12138993
Alignment:
Q  293 ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattatagttgt 357  Q
    ||||||| ||||||| ||||| |||||||||||||||||| |||||||||||||||||| |||||    
T  12138929 ctttatctctctattactttgatttttgtgcaaatacctactttttctttgtaaattatggttgt 12138993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 256 - 351
Target Start/End: Complemental strand, 18883016 - 18882912
Alignment:
Q  256 acaatttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaa 346  Q
    |||| ||||||||||| |||||||||||||||||||          ||||||| ||||||||||||| |||| || ||||||||||||||||||||||||    
T  18883016 acaacttttgtgacaactttctctctcatactcacaatactttttactttatctctctattgctttgattttcgtacaaatacctattttttctttgtaa 18882917  T
Q  347 attat 351  Q
    |||||    
T  18882916 attat 18882912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 261 - 351
Target Start/End: Original strand, 26718403 - 26718502
Alignment:
Q  261 ttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattat 351  Q
    |||| |||||||||||||||||||||||||||         ||||||| ||||||| ||||| |||||||||||||||| | ||||||||||||||||||    
T  26718403 ttttatgacaattttctctctcatactcacattactttttactttatctctctattactttgttttttgtgcaaataccaactttttctttgtaaattat 26718502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 261 - 351
Target Start/End: Original strand, 26731031 - 26731130
Alignment:
Q  261 ttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattat 351  Q
    |||| |||||||||||||||||||||||||||         ||||||| ||||||| ||||| |||||||||||||||| | ||||||||||||||||||    
T  26731031 ttttatgacaattttctctctcatactcacattactttttactttatctctctattactttgttttttgtgcaaataccaactttttctttgtaaattat 26731130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 230 - 358
Target Start/End: Original strand, 2999115 - 2999253
Alignment:
Q  230 aaatgatatttgaacattcatca-atgacaatttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttggttttt 319  Q
    ||||||||||||||||| |||   |||||||||||||||||||  || ||| ||||| ||||||         ||||||| ||||||||||||||||||     
T  2999115 aaatgatatttgaacatccattttatgacaatttttgtgacaacattatctttcatattcacattattttttactttatctctctattgctttggttttc 2999214  T
Q  320 gtgcaaatacctattttttctttgtaaattatagttgtc 358  Q
     |||||||||| | |||||||||||||||||| ||||||    
T  2999215 atgcaaataccaactttttctttgtaaattatggttgtc 2999253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 230 - 358
Target Start/End: Original strand, 13086025 - 13086163
Alignment:
Q  230 aaatgatatttgaacattcatcaa-tgacaatttttgtgacaattttctctctcatactcacatc---------tttatcactctattgctttggttttt 319  Q
    ||||||||||||| |||||||    |||||| |||||| |||| ||||||||||||||||||||          |||||| ||||||||||||| ||||     
T  13086025 aaatgatatttgatcattcattttgtgacaacttttgtaacaactttctctctcatactcacattactttttattttatctctctattgctttgattttc 13086124  T
Q  320 gtgcaaatacctattttttctttgtaaattatagttgtc 358  Q
    ||||||||||| | |||||||||||||||||| ||||||    
T  13086125 gtgcaaataccaactttttctttgtaaattatggttgtc 13086163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 230 - 358
Target Start/End: Original strand, 21617186 - 21617324
Alignment:
Q  230 aaatgatatttgaacattcatcaa-tgacaatttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttggttttt 319  Q
    ||||||||||||||||| |||    ||||||||||||| |||| ||||||||||||||||||||         ||||||| |||||||| |||| ||||     
T  21617186 aaatgatatttgaacatccattttgtgacaatttttgttacaactttctctctcatactcacattattttttactttatctctctattgttttgattttc 21617285  T
Q  320 gtgcaaatacctattttttctttgtaaattatagttgtc 358  Q
    ||||||||||||||| |||||||  ||||||| ||||||    
T  21617286 gtgcaaatacctattctttctttacaaattatggttgtc 21617324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 254 - 351
Target Start/End: Complemental strand, 28458420 - 28458314
Alignment:
Q  254 tgacaatttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgt 344  Q
    |||||| ||||||||||| ||||||||||||||||||||         ||||||| ||||||||||||| |||| |||  |||||||| |||||||||||    
T  28458420 tgacaacttttgtgacaactttctctctcatactcacattattttttactttatctctctattgctttgattttcgtgtcaatacctactttttctttgt 28458321  T
Q  345 aaattat 351  Q
    |||||||    
T  28458320 aaattat 28458314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 225 - 351
Target Start/End: Complemental strand, 32546430 - 32546295
Alignment:
Q  225 atgaaaaatgatatttgaacattcatcaa-tgacaatttttgtgacaattttctctctcatactcacat--------ctttatcactctattgctttggt 315  Q
    |||| |||||||||||||||||| ||    ||||||||||||| |||| ||| ||||||||||||||||        |||||||  |||||||||||| |    
T  32546430 atgagaaatgatatttgaacatttattttgtgacaatttttgttacaactttttctctcatactcacattatttttactttatctttctattgctttgat 32546331  T
Q  316 ttttgtgcaaatacctattttttctttgtaaattat 351  Q
    ||||||||||||||||||| |||||||  |||||||    
T  32546330 ttttgtgcaaatacctattctttctttacaaattat 32546295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 295 - 357
Target Start/End: Complemental strand, 39312609 - 39312547
Alignment:
Q  295 ttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattatagttgt 357  Q
    ||||| || ||||||||||||||| ||||||||||||||||||||||| |||||||| |||||    
T  39312609 ttatctctttattgctttggttttcgtgcaaatacctattttttctttataaattatggttgt 39312547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 230 - 350
Target Start/End: Original strand, 40609613 - 40609741
Alignment:
Q  230 aaatgatatttgaacattcatc-aatgacaatttttgtgacaattttctctctcatactcacatcttt-------atcactctattgctttggtttttgt 321  Q
    |||| |||||||||||| |||  ||||| || ||||||||||| ||||||||||||||||||||  ||       ||| |||||||| |||||||| |||    
T  40609613 aaatcatatttgaacatccatttaatgataacttttgtgacaactttctctctcatactcacattatttttacttatctctctattgttttggtttctgt 40609712  T
Q  322 gcaaatacctattttttctttgtaaatta 350  Q
    |||||||| |||||||||||| |||||||    
T  40609713 gcaaatacatattttttctttataaatta 40609741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 293 - 358
Target Start/End: Complemental strand, 46405969 - 46405904
Alignment:
Q  293 ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattatagttgtc 358  Q
    ||||||| ||||||||||||| |||| ||||||||||| | |||||||||||||||||| ||||||    
T  46405969 ctttatctctctattgctttgattttcgtgcaaataccaactttttctttgtaaattatggttgtc 46405904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 225 - 292
Target Start/End: Original strand, 7627846 - 7627914
Alignment:
Q  225 atgaaaaatgatatttgaacattcatc-aatgacaatttttgtgacaattttctctctcatactcacat 292  Q
    |||| |||||||||||||| ||||||  ||||| ||||||||||| |||||||||||||||||||||||    
T  7627846 atgagaaatgatatttgaatattcatttaatgataatttttgtgataattttctctctcatactcacat 7627914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 302 - 358
Target Start/End: Complemental strand, 13104368 - 13104312
Alignment:
Q  302 tctattgctttggtttttgtgcaaatacctattttttctttgtaaattatagttgtc 358  Q
    |||||||||||||| |||||||||||| ||| |||||||||||||||||| ||||||    
T  13104368 tctattgctttggtgtttgtgcaaatatctactttttctttgtaaattatggttgtc 13104312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 230 - 358
Target Start/End: Original strand, 22819652 - 22819790
Alignment:
Q  230 aaatgatatttgaacattcatcaa-tgacaatttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttggttttt 319  Q
    ||||||||||||||||| |||    |||||| |||||  |||| ||||||||||||||||||||         ||||||| || |||||||||| ||||     
T  22819652 aaatgatatttgaacatccattttgtgacaacttttgcaacaactttctctctcatactcacattactttttactttatctctttattgctttgattttc 22819751  T
Q  320 gtgcaaatacctattttttctttgtaaattatagttgtc 358  Q
    ||||||||||| | |||||||||||||||||| ||||||    
T  22819752 gtgcaaataccaactttttctttgtaaattatggttgtc 22819790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 261 - 358
Target Start/End: Original strand, 31657681 - 31657787
Alignment:
Q  261 ttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattat 351  Q
    ||||||||||| ||||||||||||||||||||         ||||||| |||||||||||||||||| ||| ||||||| | ||||||| ||||||| ||    
T  31657681 ttttgtgacaactttctctctcatactcacattactttttactttatctctctattgctttggttttcgtgtaaataccaactttttctatgtaaatgat 31657780  T
Q  352 agttgtc 358  Q
     ||||||    
T  31657781 ggttgtc 31657787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 256 - 349
Target Start/End: Complemental strand, 37514173 - 37514071
Alignment:
Q  256 acaatttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaa 346  Q
    |||| ||||||||||| ||||||||||||||||||||         ||||||| ||||||||||||| |||| |||| || ||||| |||||||||||||    
T  37514173 acaacttttgtgacaactttctctctcatactcacatatgtttttactttatctctctattgctttgattttcgtgccaaaacctactttttctttgtaa 37514074  T
Q  347 att 349  Q
    |||    
T  37514073 att 37514071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 230 - 292
Target Start/End: Original strand, 40348797 - 40348859
Alignment:
Q  230 aaatgatatttgaacattcatcaatgacaatttttgtgacaattttctctctcatactcacat 292  Q
    |||||||||||||||| ||||   | | |||||||||||||||||||||||||||||||||||    
T  40348797 aaatgatatttgaacaatcattttttataatttttgtgacaattttctctctcatactcacat 40348859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 256 - 349
Target Start/End: Original strand, 42815434 - 42815536
Alignment:
Q  256 acaatttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaa 346  Q
    |||| ||||||||||| ||||||||||||||||||||         ||||||| ||||||||||||| |||| ||||||| ||||| |||| ||||||||    
T  42815434 acaacttttgtgacaactttctctctcatactcacatatgtttttactttatctctctattgctttgattttcgtgcaaaaacctacttttcctttgtaa 42815533  T
Q  347 att 349  Q
    |||    
T  42815534 att 42815536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 293 - 351
Target Start/End: Complemental strand, 51573627 - 51573569
Alignment:
Q  293 ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattat 351  Q
    ||||||| ||||||||||||| |||| || ||||||||||||||||||||| |||||||    
T  51573627 ctttatctctctattgctttgattttcgtacaaatacctattttttctttgcaaattat 51573569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 293 - 358
Target Start/End: Complemental strand, 14010113 - 14010048
Alignment:
Q  293 ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattatagttgtc 358  Q
    ||||||| |||||||  ||||||||| ||||||||||| ||||||||||| |||||||| ||||||    
T  14010113 ctttatctctctattattttggttttcgtgcaaataccaattttttctttataaattatggttgtc 14010048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 293 - 358
Target Start/End: Complemental strand, 49768313 - 49768248
Alignment:
Q  293 ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattatagttgtc 358  Q
    ||||||| ||||||||||||| |||| ||||||||||||||| |||||||  ||||||| ||||||    
T  49768313 ctttatctctctattgctttgattttcgtgcaaatacctattatttctttacaaattatggttgtc 49768248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 293 - 362
Target Start/End: Complemental strand, 49896661 - 49896592
Alignment:
Q  293 ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattatagttgtctcat 362  Q
    ||||||| ||||||||||||| |||| |||  |||||| | |||||||||||||||||| ||||||||||    
T  49896661 ctttatctctctattgctttgattttcgtgtcaataccaactttttctttgtaaattatggttgtctcat 49896592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 230 - 358
Target Start/End: Complemental strand, 9362746 - 9362609
Alignment:
Q  230 aaatgatatttgaacattcatc-aatgacaatttttgtgacaattttctctctcatactcacat--------ctttatcactctattgctttggtttttg 320  Q
    ||||||||||||||||| |||  |||||||| ||||||||||| ||||| ||||||| ||| ||        ||||||| |||||||| |||| |||  |    
T  9362746 aaatgatatttgaacatccatttaatgacaacttttgtgacaactttctatctcatattcatattatttttactttatctctctattgttttgatttccg 9362647  T
Q  321 tgcaaatacctattttttctttgtaaattatagttgtc 358  Q
    |||||||||||| ||||||||| |||| ||| ||||||    
T  9362646 tgcaaatacctactttttctttataaactatggttgtc 9362609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 301 - 357
Target Start/End: Complemental strand, 27326739 - 27326683
Alignment:
Q  301 ctctattgctttggtttttgtgcaaatacctattttttctttgtaaattatagttgt 357  Q
    |||||||||||||||||| ||||||||||| | ||||||||||||||| || |||||    
T  27326739 ctctattgctttggttttcgtgcaaataccaactttttctttgtaaatgatggttgt 27326683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 226 - 292
Target Start/End: Original strand, 38519792 - 38519859
Alignment:
Q  226 tgaaaaatgatatttgaacattcatcaat-gacaatttttgtgacaattttctctctcatactcacat 292  Q
    ||||||||||||||||||||  |||   | ||||||||||||||||| ||||||||||||||||||||    
T  38519792 tgaaaaatgatatttgaacaaccattttttgacaatttttgtgacaactttctctctcatactcacat 38519859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 261 - 363
Target Start/End: Original strand, 43769746 - 43769857
Alignment:
Q  261 ttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattat 351  Q
    ||||||||||| ||||||||||||||||||||         ||||||| || ||||| |||  |||| ||||||||||| | ||||||||||||||||||    
T  43769746 ttttgtgacaactttctctctcatactcacattattttttactttatctctttattgttttaattttcgtgcaaatacccactttttctttgtaaattat 43769845  T
Q  352 agttgtctcata 363  Q
     |||||| ||||    
T  43769846 ggttgtcgcata 43769857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 230 - 285
Target Start/End: Original strand, 50050641 - 50050696
Alignment:
Q  230 aaatgatatttgaacattcatcaatgacaatttttgtgacaattttctctctcata 285  Q
    |||||||||||||||| | ||   ||||||||||||||||||||||||||||||||    
T  50050641 aaatgatatttgaacaattatttttgacaatttttgtgacaattttctctctcata 50050696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 295 - 357
Target Start/End: Complemental strand, 53405823 - 53405760
Alignment:
Q  295 ttatcactctattgctttggtttttgtgcaaatacctatttttt-ctttgtaaattatagttgt 357  Q
    ||||| ||||||||||||| ||| ||| |||||| ||||||||| |||||||||||||||||||    
T  53405823 ttatctctctattgctttgatttctgtacaaatatctatttttttctttgtaaattatagttgt 53405760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 253 - 292
Target Start/End: Original strand, 56557760 - 56557799
Alignment:
Q  253 atgacaatttttgtgacaattttctctctcatactcacat 292  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  56557760 atgacaacttttgtgacaattttctctctcatactcacat 56557799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 230 - 292
Target Start/End: Complemental strand, 2268575 - 2268513
Alignment:
Q  230 aaatgatatttgaacattcatcaatgacaatttttgtgacaattttctctctcatactcacat 292  Q
    ||||||||||||||||| |||   | |||| ||||||||||| ||||||||||||||||||||    
T  2268575 aaatgatatttgaacatccatttttaacaacttttgtgacaactttctctctcatactcacat 2268513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 230 - 358
Target Start/End: Complemental strand, 9118932 - 9118794
Alignment:
Q  230 aaatgatatttgaacattcatc-aatgacaatttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttggttttt 319  Q
    |||| |||||||||||| |||  |||||||| |||||  |||||||||||||||||| ||||||         ||||||| |||||||||| || ||||     
T  9118932 aaattatatttgaacatccatttaatgacaacttttgcaacaattttctctctcataatcacattattttttactttatctctctattgctatgattttc 9118833  T
Q  320 gtgcaaatacctattttttctttgtaaattatagttgtc 358  Q
    |||| ||||||  ||||||||||||||| ||| ||||||    
T  9118832 gtgccaataccatttttttctttgtaaaatatggttgtc 9118794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 301 - 351
Target Start/End: Original strand, 12799798 - 12799848
Alignment:
Q  301 ctctattgctttggtttttgtgcaaatacctattttttctttgtaaattat 351  Q
    ||||| ||||||| |||| ||| ||||||||||||||||||||||||||||    
T  12799798 ctctaatgctttgattttcgtgtaaatacctattttttctttgtaaattat 12799848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 293 - 355
Target Start/End: Original strand, 23853810 - 23853872
Alignment:
Q  293 ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattatagtt 355  Q
    ||||||| |||||||  |||||||||||| ||||||| || ||||||| ||||||||||||||    
T  23853810 ctttatctctctattattttggtttttgttcaaatacatactttttctgtgtaaattatagtt 23853872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 230 - 358
Target Start/End: Original strand, 30079849 - 30079987
Alignment:
Q  230 aaatgatatttgaacattcatcaa-tgacaatttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttggttttt 319  Q
    ||||||||||||||||| |||  | |||||| |||||  |||| ||||||||||||||||||||         ||||||| |||||||||| | ||||      
T  30079849 aaatgatatttgaacatccatttagtgacaacttttgcaacaactttctctctcatactcacattattttttactttatctctctattgctatagtttcc 30079948  T
Q  320 gtgcaaatacctattttttctttgtaaattatagttgtc 358  Q
    |||| ||||||  ||||||||||||||||||| ||||||    
T  30079949 gtgccaataccacttttttctttgtaaattatggttgtc 30079987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 293 - 362
Target Start/End: Original strand, 31092585 - 31092655
Alignment:
Q  293 ctttatcactctattgctttggtttttgtgcaaatacctatttt-ttctttgtaaattatagttgtctcat 362  Q
    ||||||| |||||||| | || |||| |||||||| | |||||| ||||||||||||||||||||||||||    
T  31092585 ctttatctctctattgttgtgattttcgtgcaaatgcatatttttttctttgtaaattatagttgtctcat 31092655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 230 - 292
Target Start/End: Original strand, 37297052 - 37297114
Alignment:
Q  230 aaatgatatttgaacattcatcaatgacaatttttgtgacaattttctctctcatactcacat 292  Q
    ||||||||||||||||  |||   | |||| ||||||||||||||||||||||||||||||||    
T  37297052 aaatgatatttgaacaaccattttttacaacttttgtgacaattttctctctcatactcacat 37297114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 230 - 358
Target Start/End: Complemental strand, 50273135 - 50273003
Alignment:
Q  230 aaatgatatttgaacattcatc-aatgacaatttttgtgacaattttctctctcatactcacatc---tttatcactctattgctttggtttttgtgcaa 325  Q
    ||||||||||||||||| |||  |||||||| |||||  |||| |||||||| ||||| |||||    ||| || |||||||||| ||||||  |||| |    
T  50273135 aaatgatatttgaacatccatttaatgacaacttttgcaacaactttctctcacatacccacattatttttgtctctctattgctatggtttccgtgcca 50273036  T
Q  326 atacctattttttctttgtaaattatagttgtc 358  Q
    |||||  ||||||||||||||| ||| ||||||    
T  50273035 ataccacttttttctttgtaaaatatggttgtc 50273003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 301 - 351
Target Start/End: Complemental strand, 52846216 - 52846166
Alignment:
Q  301 ctctattgctttggtttttgtgcaaatacctattttttctttgtaaattat 351  Q
    |||||||||||||||||| ||||||||||  | ||||||||||||||||||    
T  52846216 ctctattgctttggttttcgtgcaaatacaaactttttctttgtaaattat 52846166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 224 - 292
Target Start/End: Complemental strand, 439334 - 439265
Alignment:
Q  224 aatgaaaaatgatatttgaacattcatc-aatgacaatttttgtgacaattttctctctcatactcacat 292  Q
    ||||| |||| |||||||||||| |||  |||||||||||| |  |||||||||||||||||||||||||    
T  439334 aatgagaaataatatttgaacatccatttaatgacaattttcgcaacaattttctctctcatactcacat 439265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 265 - 363
Target Start/End: Original strand, 4949545 - 4949651
Alignment:
Q  265 gtgacaattttctctctcatactcacatc--------tttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattatagttg 356  Q
    ||||||| |||||||||||||||||||||        |||||| |  ||||| ||||||||  || ||||||| || |||||||||||||||||||||||    
T  4949545 gtgacaactttctctctcatactcacatcatttttactttatctcattattgttttggtttccgtacaaatacttactttttctttgtaaattatagttg 4949644  T
Q  357 tctcata 363  Q
    || ||||    
T  4949645 tcgcata 4949651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 293 - 358
Target Start/End: Original strand, 32696257 - 32696322
Alignment:
Q  293 ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattatagttgtc 358  Q
    ||||||| || |||||||||| |||| |||| |||| ||| |||||||||||||||||| ||||||    
T  32696257 ctttatctctttattgctttgattttcgtgccaatatctactttttctttgtaaattatggttgtc 32696322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 301 - 358
Target Start/End: Original strand, 38715331 - 38715388
Alignment:
Q  301 ctctattgctttggtttttgtgcaaatacctattttttctttgtaaattatagttgtc 358  Q
    |||||||||||||||||  ||||||||| |||  |||||||| |||||||||||||||    
T  38715331 ctctattgctttggtttccgtgcaaataactaccttttctttataaattatagttgtc 38715388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 292 - 357
Target Start/End: Complemental strand, 41389868 - 41389804
Alignment:
Q  292 tctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattatagttgt 357  Q
    ||||||||||| ||||||| || ||||||||| |||| ||| |||||||||||||||||| |||||    
T  41389868 tctttatcactttattgctatgatttttgtgccaata-ctactttttctttgtaaattatggttgt 41389804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 301 - 358
Target Start/End: Complemental strand, 45143660 - 45143603
Alignment:
Q  301 ctctattgctttggtttttgtgcaaatacctattttttctttgtaaattatagttgtc 358  Q
    |||||||  ||||||||| ||||||||||| | |||||||||||||||||| ||||||    
T  45143660 ctctattattttggttttcgtgcaaataccaactttttctttgtaaattatggttgtc 45143603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 301 - 358
Target Start/End: Complemental strand, 45152429 - 45152372
Alignment:
Q  301 ctctattgctttggtttttgtgcaaatacctattttttctttgtaaattatagttgtc 358  Q
    |||||||  ||||||||| ||||||||||| | |||||||||||||||||| ||||||    
T  45152429 ctctattattttggttttcgtgcaaataccaactttttctttgtaaattatggttgtc 45152372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 292
Target Start/End: Complemental strand, 149558 - 149490
Alignment:
Q  225 atgaaaaatgatatttgaacattca-tcaatgacaatttttgtgacaattttctctctcatactcacat 292  Q
    |||| |||||||||||||||| ||| |   ||| |||||||||||||| ||||||||||||||||||||    
T  149558 atgagaaatgatatttgaacaatcactttttgataatttttgtgacaactttctctctcatactcacat 149490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 295 - 351
Target Start/End: Complemental strand, 1815994 - 1815938
Alignment:
Q  295 ttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattat 351  Q
    ||||| |||||||| |||| |||||||||||||| | | ||||||||||||||||||    
T  1815994 ttatctctctattgttttgatttttgtgcaaatatccactttttctttgtaaattat 1815938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 292
Target Start/End: Complemental strand, 44257771 - 44257735
Alignment:
Q  256 acaatttttgtgacaattttctctctcatactcacat 292  Q
    |||||||||||||||| ||||||||||||||||||||    
T  44257771 acaatttttgtgacaactttctctctcatactcacat 44257735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 288
Target Start/End: Original strand, 47240815 - 47240879
Alignment:
Q  225 atgaaaaatgatatttgaacattcatcaat-gacaatttttgtgacaattttctctctcatactc 288  Q
    |||| |||||||||||||||||||||  || |||||||||||  |||| ||||||||||||||||    
T  47240815 atgataaatgatatttgaacattcatttattgacaatttttgcaacaactttctctctcatactc 47240879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 292
Target Start/End: Complemental strand, 56474805 - 56474769
Alignment:
Q  256 acaatttttgtgacaattttctctctcatactcacat 292  Q
    |||||||||||||||||||||||||| ||||||||||    
T  56474805 acaatttttgtgacaattttctctcttatactcacat 56474769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 254 - 350
Target Start/End: Complemental strand, 336851 - 336746
Alignment:
Q  254 tgacaatttttgtgacaattttctctctcatactcacat----------ctttatcactctattgctttggtttttgtgcaaatacctattttttctttg 343  Q
    |||||||||||||||||| ||||||||||||| ||||||          |||| || ||||||||||||| ||||||||| |||||| | ||||||||||    
T  336851 tgacaatttttgtgacaactttctctctcatattcacattgtatttttgctttctctctctattgctttgatttttgtgccaatacc-actttttctttg 336753  T
Q  344 taaatta 350  Q
     ||||||    
T  336752 caaatta 336746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 230 - 347
Target Start/End: Complemental strand, 624380 - 624253
Alignment:
Q  230 aaatgatatttgaacattcatcaa-tgacaatttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttggttttt 319  Q
    |||||||||||||||||  ||  | |||||| |||||  |||| ||||||||||||||||||||         ||||||| |||||||||| |||||||     
T  624380 aaatgatatttgaacatctatttagtgacaacttttgcaacaactttctctctcatactcacattactttttactttatctctctattgctatggttttc 624281  T
Q  320 gtgcaaatacctattttttctttgtaaa 347  Q
    |||| ||||||  |||||||||||||||    
T  624280 gtgccaataccacttttttctttgtaaa 624253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 225 - 287
Target Start/End: Original strand, 14443196 - 14443259
Alignment:
Q  225 atgaaaaatgatatttgaacattcatcaat-gacaatttttgtgacaattttctctctcatact 287  Q
    |||| |||||||||||||||| ||||   | ||||| |||||||||||||||||||||||||||    
T  14443196 atgagaaatgatatttgaacaatcattttttgacaacttttgtgacaattttctctctcatact 14443259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 253 - 292
Target Start/End: Complemental strand, 30170064 - 30170025
Alignment:
Q  253 atgacaatttttgtgacaattttctctctcatactcacat 292  Q
    ||||||| ||||||||||| ||||||||||||||||||||    
T  30170064 atgacaacttttgtgacaactttctctctcatactcacat 30170025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 230 - 292
Target Start/End: Original strand, 39158108 - 39158171
Alignment:
Q  230 aaatgatatttgaacattcatcaat-gacaatttttgtgacaattttctctctcatactcacat 292  Q
    |||||||||||||||| ||||   | || |||||||||||||| ||||||||||||||||||||    
T  39158108 aaatgatatttgaacaatcattttttgataatttttgtgacaactttctctctcatactcacat 39158171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 230 - 289
Target Start/End: Original strand, 45082984 - 45083043
Alignment:
Q  230 aaatgatatttgaacattcatcaatgacaatttttgtgacaattttctctctcatactca 289  Q
    ||||||||||||||||  |||   |||||| |||||||| ||||||||||||||||||||    
T  45082984 aaatgatatttgaacaaccatttttgacaacttttgtgataattttctctctcatactca 45083043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 254 - 350
Target Start/End: Complemental strand, 50890117 - 50890012
Alignment:
Q  254 tgacaatttttgtgacaattttctctctcatactcacat----------ctttatcactctattgctttggtttttgtgcaaatacctattttttctttg 343  Q
    |||||| ||||||||||| ||||||||||||||||||||          |||| || ||||||||||||| ||||||||| |||||| | ||||||||||    
T  50890117 tgacaacttttgtgacaactttctctctcatactcacattatatttttgctttctctctctattgctttgatttttgtgccaatacc-actttttctttg 50890019  T
Q  344 taaatta 350  Q
     ||||||    
T  50890018 caaatta 50890012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 262 - 292
Target Start/End: Complemental strand, 1580319 - 1580289
Alignment:
Q  262 tttgtgacaattttctctctcatactcacat 292  Q
    |||||||||||||||||||||||||||||||    
T  1580319 tttgtgacaattttctctctcatactcacat 1580289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 256 - 349
Target Start/End: Complemental strand, 3078949 - 3078847
Alignment:
Q  256 acaatttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaa 346  Q
    |||| ||||||||||| ||||||||||||||||||||         || |||| ||||||||||||| |||| |||| || ||||| |||| ||||||||    
T  3078949 acaacttttgtgacaactttctctctcatactcacatatgtttttactctatctctctattgctttgattttcgtgccaaaacctacttttcctttgtaa 3078850  T
Q  347 att 349  Q
    |||    
T  3078849 att 3078847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 254 - 292
Target Start/End: Complemental strand, 5932807 - 5932769
Alignment:
Q  254 tgacaatttttgtgacaattttctctctcatactcacat 292  Q
    |||||| ||||||||||| ||||||||||||||||||||    
T  5932807 tgacaacttttgtgacaactttctctctcatactcacat 5932769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 293 - 351
Target Start/End: Complemental strand, 13263392 - 13263335
Alignment:
Q  293 ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattat 351  Q
    ||||||| ||||||||||||| |||| |||| |||| |||||||||||||| |||||||    
T  13263392 ctttatctctctattgctttgattttcgtgc-aatatctattttttctttgcaaattat 13263335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 230 - 292
Target Start/End: Original strand, 29175230 - 29175292
Alignment:
Q  230 aaatgatatttgaacattcatcaatgacaatttttgtgacaattttctctctcatactcacat 292  Q
    ||||||||| |||||| ||||   | |||||||||||||||| ||| ||||||||||||||||    
T  29175230 aaatgatatatgaacaatcattttttacaatttttgtgacaactttttctctcatactcacat 29175292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 254 - 292
Target Start/End: Complemental strand, 31574983 - 31574945
Alignment:
Q  254 tgacaatttttgtgacaattttctctctcatactcacat 292  Q
    |||||| |||||||| |||||||||||||||||||||||    
T  31574983 tgacaacttttgtgataattttctctctcatactcacat 31574945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 230 - 358
Target Start/End: Complemental strand, 41486211 - 41486073
Alignment:
Q  230 aaatgatatttgaacattcatcaa-tgacaatttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttggttttt 319  Q
    ||||||||||||||||| |||  | ||| || |||||  |||| ||||||||||||||||||||         ||||||| |||||||||| ||||||      
T  41486211 aaatgatatttgaacatccatttagtgataacttttgcaacaactttctctctcatactcacattactttttactttatctctctattgctatggtttcc 41486112  T
Q  320 gtgcaaatacctattttttctttgtaaattatagttgtc 358  Q
    |||| ||||||  ||||||||||||||| ||| ||||||    
T  41486111 gtgccaataccacttttttctttgtaaaatatggttgtc 41486073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 230 - 292
Target Start/End: Original strand, 46634103 - 46634165
Alignment:
Q  230 aaatgatatttgaacattcatcaatgacaatttttgtgacaattttctctctcatactcacat 292  Q
    |||||||||||||||| ||||   | |||| ||||||||||| ||| ||||||||||||||||    
T  46634103 aaatgatatttgaacaatcattttttacaacttttgtgacaactttatctctcatactcacat 46634165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 293 - 358
Target Start/End: Original strand, 47099098 - 47099161
Alignment:
Q  293 ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattatagttgtc 358  Q
    ||||||| ||||||||||||||||   ||||||||||  || ||||||||||||||||| ||||||    
T  47099098 ctttatctctctattgctttggttc--gtgcaaatactaatattttctttgtaaattatggttgtc 47099161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 254 - 292
Target Start/End: Original strand, 51255774 - 51255812
Alignment:
Q  254 tgacaatttttgtgacaattttctctctcatactcacat 292  Q
    |||||| ||||||||||| ||||||||||||||||||||    
T  51255774 tgacaacttttgtgacaactttctctctcatactcacat 51255812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 293 - 351
Target Start/End: Original strand, 51852152 - 51852209
Alignment:
Q  293 ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattat 351  Q
    ||||||| |||||||| ||||||||||||||||||| |||  ||||||||||| |||||    
T  51852152 ctttatctctctattgttttggtttttgtgcaaata-ctacattttctttgtagattat 51852209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 293 - 363
Target Start/End: Complemental strand, 53647420 - 53647350
Alignment:
Q  293 ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattatagttgtctcata 363  Q
    ||||||| ||||||||||||| |||  ||  |||||||||| |||||||| |||||||| |||||| ||||    
T  53647420 ctttatctctctattgctttgatttccgtataaatacctatcttttctttataaattatggttgtcacata 53647350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 293 - 363
Target Start/End: Complemental strand, 53654745 - 53654675
Alignment:
Q  293 ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattatagttgtctcata 363  Q
    ||||||| ||| ||| | || |||||||||||| |||||| | |||||||||||||||| |||||| ||||    
T  53654745 ctttatctctccattacgttagtttttgtgcaactacctactatttctttgtaaattatggttgtcccata 53654675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 230 - 290
Target Start/End: Complemental strand, 4915741 - 4915680
Alignment:
Q  230 aaatgatatttgaacattcatcaa-tgacaatttttgtgacaattttctctctcatactcac 290  Q
    ||||||||||||||||| |||    ||||||||||| |||||| ||||||||||||||||||    
T  4915741 aaatgatatttgaacatccattttgtgacaatttttatgacaactttctctctcatactcac 4915680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 260 - 289
Target Start/End: Complemental strand, 22027479 - 22027450
Alignment:
Q  260 tttttgtgacaattttctctctcatactca 289  Q
    ||||||||||||||||||||||||||||||    
T  22027479 tttttgtgacaattttctctctcatactca 22027450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 263 - 292
Target Start/End: Original strand, 31559575 - 31559604
Alignment:
Q  263 ttgtgacaattttctctctcatactcacat 292  Q
    ||||||||||||||||||||||||||||||    
T  31559575 ttgtgacaattttctctctcatactcacat 31559604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 293 - 358
Target Start/End: Complemental strand, 36111390 - 36111325
Alignment:
Q  293 ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattatagttgtc 358  Q
    ||||||| |||||||||| ||||||  |||| ||||||  ||||||||||||||| ||| ||||||    
T  36111390 ctttatctctctattgctatggtttccgtgccaataccacttttttctttgtaaaatatggttgtc 36111325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 301 - 358
Target Start/End: Original strand, 47112008 - 47112065
Alignment:
Q  301 ctctattgctttggtttttgtgcaaatacctattttttctttgtaaattatagttgtc 358  Q
    |||| |||||||| |||| || |||||||||||| |||||||| ||||||| ||||||    
T  47112008 ctctgttgctttgattttcgtacaaatacctattatttctttgcaaattatggttgtc 47112065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 293 - 358
Target Start/End: Original strand, 51194345 - 51194410
Alignment:
Q  293 ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattatagttgtc 358  Q
    ||||||| |||||||| | ||||||| |||| ||||||  ||||||||||||||| ||| ||||||    
T  51194345 ctttatctctctattgttatggttttcgtgccaataccacttttttctttgtaaaatatggttgtc 51194410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 256 - 292
Target Start/End: Complemental strand, 10250557 - 10250521
Alignment:
Q  256 acaatttttgtgacaattttctctctcatactcacat 292  Q
    |||| ||||||||||| ||||||||||||||||||||    
T  10250557 acaacttttgtgacaactttctctctcatactcacat 10250521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 314 - 358
Target Start/End: Original strand, 17683438 - 17683482
Alignment:
Q  314 gtttttgtgcaaatacctattttttctttgtaaattatagttgtc 358  Q
    ||||| ||||||||||| | |||||||||||||||||| ||||||    
T  17683438 gttttcgtgcaaataccaactttttctttgtaaattatggttgtc 17683482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 225 - 292
Target Start/End: Complemental strand, 26207050 - 26206982
Alignment:
Q  225 atgaaaaatgatatttgaacattcatcaa-tgacaatttttgtgacaattttctctctcatactcacat 292  Q
    |||| ||||||||||||||||| |||  | ||| ||||||||  |||||||||||||||||| ||||||    
T  26207050 atgagaaatgatatttgaacatccatttagtgataatttttgcaacaattttctctctcatattcacat 26206982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 256 - 292
Target Start/End: Complemental strand, 31469030 - 31468994
Alignment:
Q  256 acaatttttgtgacaattttctctctcatactcacat 292  Q
    |||||||||||||||||||||||||| || |||||||    
T  31469030 acaatttttgtgacaattttctctcttatgctcacat 31468994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 256 - 292
Target Start/End: Complemental strand, 32696830 - 32696794
Alignment:
Q  256 acaatttttgtgacaattttctctctcatactcacat 292  Q
    |||| |||||||| |||||||||||||||||||||||    
T  32696830 acaacttttgtgataattttctctctcatactcacat 32696794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 252 - 292
Target Start/End: Original strand, 38952715 - 38952754
Alignment:
Q  252 aatgacaatttttgtgacaattttctctctcatactcacat 292  Q
    ||||||||||||| |||||| ||||||||||||||||||||    
T  38952715 aatgacaattttt-tgacaactttctctctcatactcacat 38952754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 303 - 358
Target Start/End: Original strand, 42491160 - 42491215
Alignment:
Q  303 ctattgctttggtttttgtgcaaatacctattttttctttgt-aaattatagttgtc 358  Q
    ||||||||||||||||||||| |||||||  ||||||||||| ||||||| ||||||    
T  42491160 ctattgctttggtttttgtgccaatacct-ctttttctttgtgaaattatggttgtc 42491215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 256 - 288
Target Start/End: Original strand, 47288112 - 47288144
Alignment:
Q  256 acaatttttgtgacaattttctctctcatactc 288  Q
    |||||||||||||||| ||||||||||||||||    
T  47288112 acaatttttgtgacaactttctctctcatactc 47288144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 256 - 288
Target Start/End: Original strand, 48649548 - 48649580
Alignment:
Q  256 acaatttttgtgacaattttctctctcatactc 288  Q
    |||| ||||||||||||||||||||||||||||    
T  48649548 acaacttttgtgacaattttctctctcatactc 48649580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 256 - 292
Target Start/End: Original strand, 48743740 - 48743775
Alignment:
Q  256 acaatttttgtgacaattttctctctcatactcacat 292  Q
    ||||||||| |||||||||||||||||||||||||||    
T  48743740 acaattttt-tgacaattttctctctcatactcacat 48743775  T

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Target: chr4; HSP #94
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 304 - 348
Target Start/End: Original strand, 53299274 - 53299318
Alignment:
Q  304 tattgctttggtttttgtgcaaatacctattttttctttgtaaat 348  Q
    ||||| ||||||||| || |||||||| |||||||||||||||||    
T  53299274 tattgttttggttttcgtacaaataccaattttttctttgtaaat 53299318  T

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Target: chr4; HSP #95
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 256 - 292
Target Start/End: Original strand, 54909353 - 54909389
Alignment:
Q  256 acaatttttgtgacaattttctctctcatactcacat 292  Q
    |||||||||||||||| ||||||| ||||||||||||    
T  54909353 acaatttttgtgacaactttctctttcatactcacat 54909389  T

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Target: chr4; HSP #96
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 256 - 292
Target Start/End: Complemental strand, 55609207 - 55609171
Alignment:
Q  256 acaatttttgtgacaattttctctctcatactcacat 292  Q
    |||| ||||||||||| ||||||||||||||||||||    
T  55609207 acaacttttgtgacaactttctctctcatactcacat 55609171  T

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Target: chr4; HSP #97
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 256 - 292
Target Start/End: Original strand, 55996452 - 55996487
Alignment:
Q  256 acaatttttgtgacaattttctctctcatactcacat 292  Q
    ||||||||| |||||||||||||||||||||||||||    
T  55996452 acaattttt-tgacaattttctctctcatactcacat 55996487  T

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Target: scaffold0136 (Bit Score: 51; Significance: 5e-20; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 230 - 358
Target Start/End: Original strand, 38428 - 38566
Alignment:
Q  230 aaatgatatttgaacattcatca-atgacaatttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttggttttt 319  Q
    |||| ||||||||||||||||   ||||||| ||||||||||| ||||| |||||||||||| |         ||||||| ||||||||||||||||||     
T  38428 aaataatatttgaacattcattttatgacaacttttgtgacaactttctttctcatactcacgttactttttactttatctctctattgctttggttttc 38527  T
Q  320 gtgcaaatacctattttttctttgtaaattatagttgtc 358  Q
    |||| |||||| | |||||||||||||||||||||||||    
T  38528 gtgcgaataccaactttttctttgtaaattatagttgtc 38566  T

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Target: scaffold0532 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0532
Description:

Target: scaffold0532; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 255 - 351
Target Start/End: Original strand, 10993 - 11098
Alignment:
Q  255 gacaatttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgta 345  Q
    ||||| ||||||||||| ||||||||||||||||||||         ||||||| |||||||| |||| |||| ||||||||||| | ||||||||||||    
T  10993 gacaacttttgtgacaactttctctctcatactcacattattttttactttatctctctattgttttgattttcgtgcaaatacccactttttctttgta 11092  T
Q  346 aattat 351  Q
    ||||||    
T  11093 aattat 11098  T

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Target: scaffold1956 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold1956
Description:

Target: scaffold1956; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 293 - 363
Target Start/End: Original strand, 846 - 916
Alignment:
Q  293 ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattatagttgtctcata 363  Q
    ||||||| |||||||  ||||||||| ||||||||| | |||||||||||||||||||| |||||| ||||    
T  846 ctttatctctctattattttggttttcgtgcaaatatccattttttctttgtaaattatggttgtcccata 916  T

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Target: scaffold0221 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 230 - 358
Target Start/End: Original strand, 8217 - 8355
Alignment:
Q  230 aaatgatatttgaacattcatca-atgacaatttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttggttttt 319  Q
    |||||||||||||||||||||   ||||||| |||||  |||| ||||||||||||| ||| ||         ||||||| ||||||||||||||||||     
T  8217 aaatgatatttgaacattcattttatgacaacttttgcaacaactttctctctcatattcatattactttttactttatccctctattgctttggttttc 8316  T
Q  320 gtgcaaatacctattttttctttgtaaattatagttgtc 358  Q
    ||||||||| | | ||||||||||||||| || ||||||    
T  8317 gtgcaaatatcaactttttctttgtaaatgatggttgtc 8355  T

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Target: scaffold0141 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 293 - 358
Target Start/End: Original strand, 12008 - 12073
Alignment:
Q  293 ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattatagttgtc 358  Q
    ||||||| |||||||| ||||||||| ||||| ||||| | |||||||||||||||||| ||||||    
T  12008 ctttatctctctattgttttggttttcgtgcacataccaactttttctttgtaaattatggttgtc 12073  T

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Target: scaffold0035 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 293 - 351
Target Start/End: Complemental strand, 72042 - 71984
Alignment:
Q  293 ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattat 351  Q
    |||||||  |||||||||||| |||| ||| ||||||||||||||||||| ||||||||    
T  72042 ctttatctttctattgctttgattttagtgtaaatacctattttttctttataaattat 71984  T

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Target: scaffold0856 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0856
Description:

Target: scaffold0856; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 294 - 358
Target Start/End: Complemental strand, 2024 - 1961
Alignment:
Q  294 tttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaattatagttgtc 358  Q
    |||||| ||||||||||||| |||| || ||| ||||||||||||||||  ||||||||||||||    
T  2024 tttatctctctattgctttgattttcgtacaa-tacctattttttctttacaaattatagttgtc 1961  T

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Target: scaffold0174 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 292
Target Start/End: Complemental strand, 34867 - 34799
Alignment:
Q  225 atgaaaaatgatatttgaaca-ttcatcaatgacaatttttgtgacaattttctctctcatactcacat 292  Q
    ||||||||||||||||| ||| || ||   ||||||||||| |||||| ||||||||||||||||||||    
T  34867 atgaaaaatgatatttgtacaattaatttgtgacaatttttatgacaactttctctctcatactcacat 34799  T

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Target: scaffold0010 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 293 - 363
Target Start/End: Complemental strand, 134298 - 134227
Alignment:
Q  293 ctttatcactctattgctttggtttttgtgcaaatacctattttttctttgtaaat-tatagttgtctcata 363  Q
    ||||||| || ||||| ||||||||| |||  |||||||||||||||||||||| | |||||||||| ||||    
T  134298 ctttatctctttattgttttggttttcgtgtcaatacctattttttctttgtaactctatagttgtcccata 134227  T

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Target: scaffold0471 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 230 - 358
Target Start/End: Original strand, 10 - 148
Alignment:
Q  230 aaatgatatttgaacattcatcaa-tgacaatttttgtgacaattttctctctcatactcacat---------ctttatcactctattgctttggttttt 319  Q
    ||||||||||||||||| |||  | ||| || |||||  |||||||||||| ||||||||||||         ||||||| |||||||| | |||||||     
T  10 aaatgatatttgaacatccatttagtgaaaacttttgcaacaattttctctttcatactcacattactttttactttatctctctattgttatggttttc 109  T
Q  320 gtgcaaatacctattttttctttgtaaattatagttgtc 358  Q
    |||| ||||||  ||||||||||||||| ||| ||||||    
T  110 gtgccaataccacttttttctttgtaaaatatggttgtc 148  T

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Target: scaffold0199 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 227 - 289
Target Start/End: Original strand, 8668 - 8730
Alignment:
Q  227 gaaaaatgatatttgaacattcatcaatgacaatttttgtgacaattttctctctcatactca 289  Q
    ||||||||||||||||||| ||||   | |||| ||||||||||| ||||||| |||||||||    
T  8668 gaaaaatgatatttgaacaatcattttttacaacttttgtgacaactttctctttcatactca 8730  T

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Target: scaffold0128 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 254 - 292
Target Start/End: Original strand, 10964 - 11002
Alignment:
Q  254 tgacaatttttgtgacaattttctctctcatactcacat 292  Q
    |||||| ||||||||||| ||||||||||||||||||||    
T  10964 tgacaacttttgtgacaactttctctctcatactcacat 11002  T

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Target: scaffold0045 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 254 - 292
Target Start/End: Original strand, 41783 - 41821
Alignment:
Q  254 tgacaatttttgtgacaattttctctctcatactcacat 292  Q
    |||||||||||||||||| |||||||||||| |||||||    
T  41783 tgacaatttttgtgacaactttctctctcattctcacat 41821  T

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Target: scaffold0034 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 254 - 292
Target Start/End: Complemental strand, 101949 - 101911
Alignment:
Q  254 tgacaatttttgtgacaattttctctctcatactcacat 292  Q
    |||||| ||||||||||| ||||||||||||||||||||    
T  101949 tgacaacttttgtgacaactttctctctcatactcacat 101911  T

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Target: scaffold0276 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0276
Description:

Target: scaffold0276; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 256 - 288
Target Start/End: Original strand, 1674 - 1706
Alignment:
Q  256 acaatttttgtgacaattttctctctcatactc 288  Q
    |||| ||||||||||||||||||||||||||||    
T  1674 acaacttttgtgacaattttctctctcatactc 1706  T

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Target: scaffold0201 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 256 - 292
Target Start/End: Original strand, 8502 - 8538
Alignment:
Q  256 acaatttttgtgacaattttctctctcatactcacat 292  Q
    ||||||||| |||||| ||||||||||||||||||||    
T  8502 acaatttttatgacaactttctctctcatactcacat 8538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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