View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16134_low_6 (Length: 426)
Name: NF16134_low_6
Description: NF16134
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16134_low_6 |
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Alignment Details
Target: chr5 (Bit Score: 364; Significance: 0; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 364; E-Value: 0
Query Start/End: Original strand, 5 - 407
Target Start/End: Original strand, 27037981 - 27038380
Alignment:
| Q |
5 |
agaaaacctaggagttgcaaagatgttgagctgggaaagaaaattccacatccaggagcttgctttaaaatgaacttgtgttggagtagcaaacaattga |
104 |
Q |
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| T |
27037981 |
agaaaacctaggagttgcaaagatgttgagctgggaaagaaaattccacagccaggagcttgctttaaaatgaacttgtgttggagtagcaaacaattga |
27038080 |
T |
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| Q |
105 |
ctgagttactgaacaatgaaggtaatgtacaaacgtgtggtcatgagatatagcaacctgccaatgagccttctaaaatgaggaaatgtcagaaaaattg |
204 |
Q |
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| T |
27038081 |
ctgagttactgaacaatgaaggtaatgtacgaacgtgtggtaatgagatatagcaacctgccaatgagccttctaaa-tgaggaaatgtcagaaaaattg |
27038179 |
T |
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| Q |
205 |
gaccactatcttgatggaatttgatagagggataagaagaagtattgataggcttgcaatttagatgttcactatctgataacagatctaagcaatactt |
304 |
Q |
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| T |
27038180 |
gaccactatcttgatggaatttgatagagggataagaagaagtattgataggcttgcaatttagatgttcactatctgataacagatctaagcaatactt |
27038279 |
T |
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| Q |
305 |
gctttgacaaagagaaatgcctttcttagatcttgcaatttctagacctaaaaaatacttaagtgtgccaagatccttgatattgatagcattgtgaaga |
404 |
Q |
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| T |
27038280 |
gcgttgacaaagagaaatgcctttctaagatcttgcaatttctagacctaaaaaatactt--gtgtgccaagatccttgatattgatagcattgtgaaga |
27038377 |
T |
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