View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16134_low_7 (Length: 320)
Name: NF16134_low_7
Description: NF16134
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16134_low_7 |
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Alignment Details
Target: chr8 (Bit Score: 259; Significance: 1e-144; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 33 - 307
Target Start/End: Original strand, 12943672 - 12943946
Alignment:
| Q |
33 |
atcgaccaggacaaagaaaagaaaatatgcttctcaaatttcaggacggtgttgactaactgaattataagttgaaaataataacaataatttgaaaacc |
132 |
Q |
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| T |
12943672 |
atcgaccaggacaaagaaaagaaaatatgcttctcaaatttcaggacggtgttgactaaatgaattataagttgaaaataataataataatttgaaaacc |
12943771 |
T |
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| Q |
133 |
gactctcagatgaattgagagggtttgtttacttttgttgtaaactgtgatacatggaatgtgagagattgatacctagatactaaggaaaaattaggat |
232 |
Q |
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| T |
12943772 |
gactcttagatgaattgagagggtttgtttacttttgttgtaaactgtgatacatggaatgtgagagattgatacctagatactaaggaaaaattaggtt |
12943871 |
T |
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| Q |
233 |
agaatataagtaaatttatgaatacatgagtcatgcaagaaaggtatggatgaagattagtttattcctcctaaa |
307 |
Q |
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| T |
12943872 |
agaatataagtaaatttatgaatacatgagtcatgcaagaaaggtatggatgaagattagtttattcctcctaaa |
12943946 |
T |
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