View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF16140_high_5 (Length: 444)
Name: NF16140_high_5
Description: NF16140
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16140_high_5 |
 | |
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| [»] scaffold0020 (1 HSPs) |
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| [»] scaffold0630 (1 HSPs) |
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| [»] scaffold0063 (1 HSPs) |
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| [»] scaffold0401 (1 HSPs) |
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| [»] scaffold0439 (1 HSPs) |
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| [»] scaffold0371 (2 HSPs) |
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| [»] scaffold0385 (1 HSPs) |
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| [»] scaffold0039 (1 HSPs) |
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| [»] scaffold0011 (1 HSPs) |
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| [»] scaffold0048 (1 HSPs) |
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| [»] scaffold0431 (1 HSPs) |
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| [»] scaffold1437 (1 HSPs) |
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| [»] scaffold1160 (1 HSPs) |
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| [»] scaffold0108 (1 HSPs) |
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| [»] scaffold0121 (1 HSPs) |
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| [»] scaffold0021 (1 HSPs) |
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| [»] scaffold0092 (1 HSPs) |
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| [»] scaffold0217 (1 HSPs) |
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| [»] scaffold0103 (1 HSPs) |
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| [»] scaffold0165 (1 HSPs) |
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| [»] scaffold0337 (1 HSPs) |
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| [»] scaffold0017 (1 HSPs) |
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| [»] scaffold1939 (1 HSPs) |
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| [»] scaffold0058 (1 HSPs) |
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| [»] scaffold1102 (1 HSPs) |
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| [»] scaffold0394 (1 HSPs) |
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| [»] scaffold0145 (1 HSPs) |
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| [»] scaffold0120 (1 HSPs) |
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| [»] scaffold0016 (1 HSPs) |
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| [»] scaffold0300 (1 HSPs) |
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| [»] scaffold0594 (1 HSPs) |
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| [»] scaffold0485 (1 HSPs) |
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| [»] scaffold1800 (1 HSPs) |
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| [»] scaffold0261 (1 HSPs) |
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| [»] scaffold0213 (1 HSPs) |
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| [»] scaffold0125 (1 HSPs) |
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Alignment Details
Target: scaffold0020 (Bit Score: 121; Significance: 8e-62; HSPs: 1)
Name: scaffold0020
Description:
Target: scaffold0020; HSP #1
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 24 - 156
Target Start/End: Complemental strand, 174259 - 174127
Alignment:
| Q |
24 |
gactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaa |
123 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| |
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|
| T |
174259 |
gactaaccttctttaatcataagtatgtaatcctgaaaaagggtttaaccttgtagttgttaataggttttgatgttgtagaattagggtttgaaactaa |
174160 |
T |
|
| Q |
124 |
aattgatcgtagaaagagtagataatccgatga |
156 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |
|
|
| T |
174159 |
aattgatcgtagaaagagtagataatccgatga |
174127 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 120; Significance: 3e-61; HSPs: 20)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 25 - 156
Target Start/End: Original strand, 19565933 - 19566064
Alignment:
| Q |
25 |
actaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaaa |
124 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||| |
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|
| T |
19565933 |
actaaccttctttaatcataagtatgtaatcctgaaaaagggtttaaccttgtagttgttaataggttttgatgttgtagaattagggtttgaaactaaa |
19566032 |
T |
|
| Q |
125 |
attgatcgtagaaagagtagataatccgatga |
156 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |
|
|
| T |
19566033 |
attgatcgtagaaagagtagataatccgatga |
19566064 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 22 - 156
Target Start/End: Original strand, 33243306 - 33243440
Alignment:
| Q |
22 |
gagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaact |
121 |
Q |
| |
|
||||||||| |||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
33243306 |
gagactaacattctttaatcataagtatgtaatcttgaaatagggtttaatcttgtagttgttaataggttttgatgttgtagaattagggtttgaaact |
33243405 |
T |
|
| Q |
122 |
aaaattgatcgtagaaagagtagataatccgatga |
156 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||| |
|
|
| T |
33243406 |
aaaattgattgtagaaagagtagataatccgatga |
33243440 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 24 - 156
Target Start/End: Complemental strand, 12623354 - 12623222
Alignment:
| Q |
24 |
gactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaa |
123 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
12623354 |
gactaaccttctttaatcataggtatgtaatcctgaaaaagggtttaaccttgtagttgttaataggttttgatgttgtagaattagggtttgaaactaa |
12623255 |
T |
|
| Q |
124 |
aattgatcgtagaaagagtagataatccgatga |
156 |
Q |
| |
|
||||||| |||||||||||||||||| |||||| |
|
|
| T |
12623254 |
aattgattgtagaaagagtagataatgcgatga |
12623222 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 24 - 156
Target Start/End: Complemental strand, 40230344 - 40230212
Alignment:
| Q |
24 |
gactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaa |
123 |
Q |
| |
|
||||||| |||||||||||||||||||||||| |||| |||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
40230344 |
gactaactttctttaatcataagtatgtaatcttgaaaaagggtttaacattgtagttgttaataggttttgatgttgtagaattagggtttgaaactaa |
40230245 |
T |
|
| Q |
124 |
aattgatcgtagaaagagtagataatccgatga |
156 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |
|
|
| T |
40230244 |
aattgatcgtagaaagagtagataatccgatga |
40230212 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 24 - 156
Target Start/End: Original strand, 44023617 - 44023749
Alignment:
| Q |
24 |
gactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaa |
123 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||| |||||||||| |||||| |||||| ||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
44023617 |
gactaaccttctttaatcataagtatgtaatcttgaaaaagggtttaaccttgtacttgttagtaggttttgatgttgtagaattagggtttgaaactaa |
44023716 |
T |
|
| Q |
124 |
aattgatcgtagaaagagtagataatccgatga |
156 |
Q |
| |
|
||||||||||||||||||||||||||| ||||| |
|
|
| T |
44023717 |
aattgatcgtagaaagagtagataatctgatga |
44023749 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 24 - 156
Target Start/End: Complemental strand, 46741237 - 46741105
Alignment:
| Q |
24 |
gactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaa |
123 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||||||||| ||||||||||||| |
|
|
| T |
46741237 |
gactaaccttctttaatcataaatatgtaatcctgaaaaagggtttaaccttgtagttgttaattggttttgatgttgtagaattagggtttgaaactaa |
46741138 |
T |
|
| Q |
124 |
aattgatcgtagaaagagtagataatccgatga |
156 |
Q |
| |
|
||||||| ||||||||||| ||||||||||||| |
|
|
| T |
46741137 |
aattgattgtagaaagagtggataatccgatga |
46741105 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 51 - 156
Target Start/End: Complemental strand, 33186913 - 33186808
Alignment:
| Q |
51 |
taatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaaaattgatcgtagaaagagtagataatc |
150 |
Q |
| |
|
|||| ||||| |||||||||| ||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
33186913 |
taattctgaaaaagggtttaaccttgtggttgttaataggttttgatgttgtagaattagggtttgaaactaaaattgattgtagaaagagtagataatc |
33186814 |
T |
|
| Q |
151 |
cgatga |
156 |
Q |
| |
|
|||||| |
|
|
| T |
33186813 |
cgatga |
33186808 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 62 - 156
Target Start/End: Original strand, 12424345 - 12424439
Alignment:
| Q |
62 |
aagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatga |
156 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12424345 |
aagggtttaactttgtagttgttaataggttttgatgttgtagaattagggtttggaactaaaattgatcgtagaaagagtagataatccgatga |
12424439 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 213 - 309
Target Start/End: Complemental strand, 355784 - 355687
Alignment:
| Q |
213 |
aatgatgattgatttggctatgatatgtatacatgaaaagtggattaactaggcgtaaatgattaatc-tctcaaatgctaattgtgctaaatgaagt |
309 |
Q |
| |
|
|||||||||| |||| |||||||||||||||| ||||| |||||||| |||||||||||||||||||| | ||||| |||| || ||||||||||||| |
|
|
| T |
355784 |
aatgatgattaattttgctatgatatgtatacttgaaatgtggattagctaggcgtaaatgattaatcgtttcaaaggctagttttgctaaatgaagt |
355687 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 379 - 432
Target Start/End: Complemental strand, 355547 - 355494
Alignment:
| Q |
379 |
gatgttgactagtgacgatgaaaatatatatgtataaagtgacgatattgatga |
432 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
355547 |
gatgttgactagtgacgatgaaaatatatatgtataaagtgacgatgttgatga |
355494 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 24 - 156
Target Start/End: Complemental strand, 18463061 - 18462929
Alignment:
| Q |
24 |
gactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaacta- |
122 |
Q |
| |
|
|||||||||||||||||||| ||||| |||| ||||| ||||||||||| ||||||||||||||| ||||||||||| || || | |||||| ||| || |
|
|
| T |
18463061 |
gactaaccttctttaatcatgagtatataattctgaaaaagggtttaattttgtagttgttaata-gttttgatgttataaaagttaggttttaaattac |
18462963 |
T |
|
| Q |
123 |
aaattgatcgtagaaagagtagataatccgatga |
156 |
Q |
| |
|
|| ||||| || ||||| |||| |||||| |||| |
|
|
| T |
18462962 |
aatttgattgttgaaagtgtaggtaatccaatga |
18462929 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 379 - 435
Target Start/End: Original strand, 12319050 - 12319106
Alignment:
| Q |
379 |
gatgttgactagtgacgatgaaaatatatatgtataaagtgacgatattgatgatgt |
435 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
12319050 |
gatgttgactggtgacgatgaaaatatatatgtataaagtgacgatgttgatgatgt |
12319106 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 25 - 106
Target Start/End: Complemental strand, 14477668 - 14477588
Alignment:
| Q |
25 |
actaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaa |
106 |
Q |
| |
|
||||||||||||||||||| ||||| |||| ||||| |||||||| |||||||||| ||| ||| ||||||||||| ||||| |
|
|
| T |
14477668 |
actaaccttctttaatcatgagtatataattctgaaaaagggtttgatcttgtagtcgttgata-gttttgatgttatagaa |
14477588 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 23 - 71
Target Start/End: Original strand, 45314096 - 45314144
Alignment:
| Q |
23 |
agactaaccttctttaatcataagtatgtaatcctgaagaagggtttaa |
71 |
Q |
| |
|
|||||||||||| ||||||||||||||||||| ||||| |||||||||| |
|
|
| T |
45314096 |
agactaaccttcattaatcataagtatgtaattctgaaaaagggtttaa |
45314144 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 90 - 156
Target Start/End: Complemental strand, 16296844 - 16296777
Alignment:
| Q |
90 |
gttttgatgttgtagaa-ttaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatga |
156 |
Q |
| |
|
||||||||||| ||||| ||| ||||||||| |||||||||| || |||||||||| ||||||||||| |
|
|
| T |
16296844 |
gttttgatgttatagaaattagggtttgaaattaaaattgattgttgaaagagtaggtaatccgatga |
16296777 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 24 - 71
Target Start/End: Original strand, 26921523 - 26921570
Alignment:
| Q |
24 |
gactaaccttctttaatcataagtatgtaatcctgaagaagggtttaa |
71 |
Q |
| |
|
||||||||||| ||||||||||||||||||| ||||| |||||||||| |
|
|
| T |
26921523 |
gactaaccttcattaatcataagtatgtaattctgaaaaagggtttaa |
26921570 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 57 - 100
Target Start/End: Complemental strand, 20150830 - 20150787
Alignment:
| Q |
57 |
tgaagaagggtttaatcttgtagttgttaataggttttgatgtt |
100 |
Q |
| |
|
|||| |||| ||||| |||||||||||||||||||||||||||| |
|
|
| T |
20150830 |
tgaaaaaggatttaaccttgtagttgttaataggttttgatgtt |
20150787 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 24 - 106
Target Start/End: Complemental strand, 13165170 - 13165089
Alignment:
| Q |
24 |
gactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaa |
106 |
Q |
| |
|
|||||||||||||||||||| ||||| || |||| ||||| ||||| || |||||||||||| ||||||||||| ||||| |
|
|
| T |
13165170 |
gactaaccttctttaatcatgagtataggattgtgaaaaaggggttaattttatagttgttaata-gttttgatgttatagaa |
13165089 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 57 - 106
Target Start/End: Original strand, 2424435 - 2424483
Alignment:
| Q |
57 |
tgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaa |
106 |
Q |
| |
|
|||| |||||||||||||||||||||||| || ||||||||||| ||||| |
|
|
| T |
2424435 |
tgaaaaagggtttaatcttgtagttgttatta-gttttgatgttatagaa |
2424483 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 337 - 377
Target Start/End: Complemental strand, 355602 - 355562
Alignment:
| Q |
337 |
tgatgatgatttttgatgatgagtatacatatataaagtga |
377 |
Q |
| |
|
||||| |||||||| |||| ||||||||||||||||||||| |
|
|
| T |
355602 |
tgatggtgattttttatgacgagtatacatatataaagtga |
355562 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0630 (Bit Score: 117; Significance: 2e-59; HSPs: 1)
Name: scaffold0630
Description:
Target: scaffold0630; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 24 - 156
Target Start/End: Complemental strand, 9101 - 8969
Alignment:
| Q |
24 |
gactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaa |
123 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
9101 |
gactaaccttctttaatcataagtatgtaatcctgaaaaagggtttaatcttgtagttgttaataggttttgatgttgtagaattagggtttgaaactaa |
9002 |
T |
|
| Q |
124 |
aattgatcgtagaaagagtagataatccgatga |
156 |
Q |
| |
|
|||||||||||||||||||| ||||| |||||| |
|
|
| T |
9001 |
aattgatcgtagaaagagtatataatgcgatga |
8969 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 117; Significance: 2e-59; HSPs: 9)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 24 - 156
Target Start/End: Original strand, 9743093 - 9743225
Alignment:
| Q |
24 |
gactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaa |
123 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| |||||||||||||||||||| ||||||||||||| |
|
|
| T |
9743093 |
gactaaccttctttaatcataagtatgtaatcctgaaaaagggtttaaccttgtagttgttaataagttttgatgttgtagaattagggtttgaaactaa |
9743192 |
T |
|
| Q |
124 |
aattgatcgtagaaagagtagataatccgatga |
156 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |
|
|
| T |
9743193 |
aattgatcgtagaaagagtagataatccgatga |
9743225 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 28 - 156
Target Start/End: Complemental strand, 14318106 - 14317978
Alignment:
| Q |
28 |
aaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaaaatt |
127 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||||||| |||| |||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
14318106 |
aaccttctttaatcataagtatgtaatcctgaaaaagggtttaaccttgcagttgttaataggttttgatgttgtagaattagggtttgaaactaaaatt |
14318007 |
T |
|
| Q |
128 |
gatcgtagaaagagtagataatccgatga |
156 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
14318006 |
gatcgtagaaagagtagataatccgatga |
14317978 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 24 - 156
Target Start/End: Original strand, 15119321 - 15119453
Alignment:
| Q |
24 |
gactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaa |
123 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||| |||||||||| ||||||||||||||||| ||||||||||||||||||| ||||||||||||| |
|
|
| T |
15119321 |
gactaaccttctttaatcataagtatgtaatcttgaaaaagggtttaaccttgtagttgttaatagattttgatgttgtagaattagggtttgaaactaa |
15119420 |
T |
|
| Q |
124 |
aattgatcgtagaaagagtagataatccgatga |
156 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |
|
|
| T |
15119421 |
aattgatcgtagaaagagtagataatccgatga |
15119453 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 24 - 156
Target Start/End: Original strand, 14160870 - 14161002
Alignment:
| Q |
24 |
gactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaa |
123 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| | |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
14160870 |
gactaaccttctttaatcataagtatgtaatcctgaaaaggggtttaaccttgtagttgttaataggttttgatgttgtagaattagggtttgaaactaa |
14160969 |
T |
|
| Q |
124 |
aattgatcgtagaaagagtagataatccgatga |
156 |
Q |
| |
|
||||||| |||||||||||||||||| |||||| |
|
|
| T |
14160970 |
aattgattgtagaaagagtagataattcgatga |
14161002 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 65 - 156
Target Start/End: Original strand, 43276799 - 43276890
Alignment:
| Q |
65 |
ggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatga |
156 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| |||||||||||| |
|
|
| T |
43276799 |
ggtttaaccttgtagttgttaataggttttgatgttgtagaattagggtttgaaactaaaattgattgtagaaagagtaaataatccgatga |
43276890 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 62 - 153
Target Start/End: Original strand, 8513806 - 8513898
Alignment:
| Q |
62 |
aagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaaaattgatcgtag-aaagagtagataatccga |
153 |
Q |
| |
|
|||||||||| |||||||||||| ||||||||||||| |||||||||| ||||||||||||||| | || |||| |||||||||||||||||| |
|
|
| T |
8513806 |
aagggtttaaccttgtagttgtttataggttttgatgctgtagaattagggtttgaaactaaaactaattgtagaaaagagtagataatccga |
8513898 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 22 - 84
Target Start/End: Original strand, 42565845 - 42565907
Alignment:
| Q |
22 |
gagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgtt |
84 |
Q |
| |
|
|||||||| ||||||||||||||| ||| |||| ||||| ||||||||||||||||||||||| |
|
|
| T |
42565845 |
gagactaatcttctttaatcataaatatataattctgaaaaagggtttaatcttgtagttgtt |
42565907 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 62 - 109
Target Start/End: Original strand, 8488147 - 8488194
Alignment:
| Q |
62 |
aagggtttaatcttgtagttgttaataggttttgatgttgtagaatta |
109 |
Q |
| |
|
|||||||||| ||| |||||||| ||||||||||||| |||||||||| |
|
|
| T |
8488147 |
aagggtttaaccttatagttgtttataggttttgatgctgtagaatta |
8488194 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 24 - 118
Target Start/End: Complemental strand, 33060476 - 33060383
Alignment:
| Q |
24 |
gactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaa |
118 |
Q |
| |
|
|||||||||||||||||||| ||| | |||| ||| | ||||||||||| |||| |||||| ||| ||||||||| ||||| | ||||||||| |
|
|
| T |
33060476 |
gactaaccttctttaatcatgagtctataattctggaaaagggtttaattttgttgttgtttata-attttgatgtaatagaagttaggtttgaa |
33060383 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 117; Significance: 2e-59; HSPs: 14)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 24 - 156
Target Start/End: Original strand, 53646073 - 53646205
Alignment:
| Q |
24 |
gactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaa |
123 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
53646073 |
gactaaccttctttaatcataaatatgtaatcctgaaaaagggtttaaccttgtagttgttaataggttttgatgttgtagaattagggtttgaaactaa |
53646172 |
T |
|
| Q |
124 |
aattgatcgtagaaagagtagataatccgatga |
156 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |
|
|
| T |
53646173 |
aattgatcgtagaaagagtagataatccgatga |
53646205 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 24 - 156
Target Start/End: Original strand, 54330321 - 54330453
Alignment:
| Q |
24 |
gactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaa |
123 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
54330321 |
gactaactttctttaatcataagtatgtaatcctgaaaaagggtttaaccttgtagttgttaataggttttgatgttgtagaattagggtttgaaactaa |
54330420 |
T |
|
| Q |
124 |
aattgatcgtagaaagagtagataatccgatga |
156 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |
|
|
| T |
54330421 |
aattgatcgtagaaagagtagataatccgatga |
54330453 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 56 - 156
Target Start/End: Original strand, 14152446 - 14152546
Alignment:
| Q |
56 |
ctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatg |
155 |
Q |
| |
|
||||| |||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| ||| |||||||||||||||||||| |
|
|
| T |
14152446 |
ctgaaaaagggtttaaccttgtagttgttagtaggttttgatgttgtagaattagggtttgaaactaaaattgattgtataaagagtagataatccgatg |
14152545 |
T |
|
| Q |
156 |
a |
156 |
Q |
| |
|
| |
|
|
| T |
14152546 |
a |
14152546 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 57 - 156
Target Start/End: Complemental strand, 5215651 - 5215552
Alignment:
| Q |
57 |
tgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatga |
156 |
Q |
| |
|
|||| |||||||||| ||||||||| ||||||||||||||||||||||||||| ||||| |||||||||||||| ||||| ||||||||||||||||||| |
|
|
| T |
5215651 |
tgaaaaagggtttaaccttgtagttattaataggttttgatgttgtagaattagggtttaaaactaaaattgattgtagatagagtagataatccgatga |
5215552 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 213 - 347
Target Start/End: Original strand, 511652 - 511789
Alignment:
| Q |
213 |
aatgatgattgatttggctatgatatgtatacatgaaaagtggattaactaggcgtaaatgattaatc-tctcaaatgctaattgtgctaaatgaagt-- |
309 |
Q |
| |
|
|||||||||| |||| ||||||||||| |||| ||||| |||||||| |||| ||||||||||||||| | ||||| ||||||||||||||||||||| |
|
|
| T |
511652 |
aatgatgattaatttagctatgatatgcatacttgaaatgtggattagctagacgtaaatgattaatcgtttcaaaggctaattgtgctaaatgaagtga |
511751 |
T |
|
| Q |
310 |
tgctacttatttgatgtggtaaatgtttgatgatgatt |
347 |
Q |
| |
|
|| ||| || |||||| ||| |||||| ||||||||| |
|
|
| T |
511752 |
tgttacctacttgatgaagtatatgttttatgatgatt |
511789 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 24 - 115
Target Start/End: Original strand, 21845666 - 21845756
Alignment:
| Q |
24 |
gactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggttt |
115 |
Q |
| |
|
|||||||||||||||||||||||||| || | ||||| |||||||||| |||||||||||||||| ||||||||||| ||||| | |||||| |
|
|
| T |
21845666 |
gactaaccttctttaatcataagtatatagttctgaaaaagggtttaagcttgtagttgttaata-gttttgatgttatagaaattaggttt |
21845756 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 24 - 106
Target Start/End: Complemental strand, 48631369 - 48631288
Alignment:
| Q |
24 |
gactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaa |
106 |
Q |
| |
|
|||||||||||||||||||||| ||| || | ||||| |||||||||| |||||||||||||||| ||||||||||| ||||| |
|
|
| T |
48631369 |
gactaaccttctttaatcataaatatatagttctgaaaaagggtttaagcttgtagttgttaata-gttttgatgttatagaa |
48631288 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 88 - 156
Target Start/End: Complemental strand, 15566486 - 15566418
Alignment:
| Q |
88 |
aggttttgatgttgtagaattaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatga |
156 |
Q |
| |
|
|||||||||||| ||| ||||| ||||| |||||||||||||||||||||| ||||||||||| ||||| |
|
|
| T |
15566486 |
aggttttgatgtggtaaaattagggtttaaaactaaaattgatcgtagaaatagtagataatctgatga |
15566418 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 379 - 432
Target Start/End: Original strand, 511880 - 511935
Alignment:
| Q |
379 |
gatgttgactagtgacgatgaaa--atatatatgtataaagtgacgatattgatga |
432 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| |
|
|
| T |
511880 |
gatgttgactagtgacgatgaaaatatatatatgtataaagtgacgatgttgatga |
511935 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 51 - 99
Target Start/End: Complemental strand, 15566754 - 15566706
Alignment:
| Q |
51 |
taatcctgaagaagggtttaatcttgtagttgttaataggttttgatgt |
99 |
Q |
| |
|
|||| ||||| |||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
15566754 |
taattctgaaaaagggtttaaccttgtagttgttaataggttttgatgt |
15566706 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 337 - 382
Target Start/End: Original strand, 511825 - 511870
Alignment:
| Q |
337 |
tgatgatgatttttgatgatgagtatacatatataaagtgacgatg |
382 |
Q |
| |
|
||||| |||||||| |||| |||||||||||||||||||||||||| |
|
|
| T |
511825 |
tgatggtgattttttatgacgagtatacatatataaagtgacgatg |
511870 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 22 - 115
Target Start/End: Original strand, 3160639 - 3160731
Alignment:
| Q |
22 |
gagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggttt |
115 |
Q |
| |
|
|||||||||||||||||||||| ||||| |||| || || | |||||||| ||||||||||| ||| |||||||| || ||||| | |||||| |
|
|
| T |
3160639 |
gagactaaccttctttaatcatgagtatataattctaaaaatgggtttaactttgtagttgttgata-gttttgatattatagaaattaggttt |
3160731 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 113 - 156
Target Start/End: Original strand, 45803440 - 45803483
Alignment:
| Q |
113 |
tttgaaactaaaattgatcgtagaaagagtagataatccgatga |
156 |
Q |
| |
|
|||||||||||||||||| || |||||||||| ||||||||||| |
|
|
| T |
45803440 |
tttgaaactaaaattgattgttgaaagagtaggtaatccgatga |
45803483 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 255 - 295
Target Start/End: Complemental strand, 10289923 - 10289882
Alignment:
| Q |
255 |
gattaactaggcgtaaatgattaatc-tctcaaatgctaatt |
295 |
Q |
| |
|
|||||||||||||||||||||||||| ||||| ||||||||| |
|
|
| T |
10289923 |
gattaactaggcgtaaatgattaatcatctcacatgctaatt |
10289882 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0063 (Bit Score: 115; Significance: 3e-58; HSPs: 1)
Name: scaffold0063
Description:
Target: scaffold0063; HSP #1
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 22 - 156
Target Start/End: Complemental strand, 62758 - 62624
Alignment:
| Q |
22 |
gagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaact |
121 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| ||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
62758 |
gagactaaccttctttaatcataagtatgtaatcctgaaaaagggtttaaccttgtggttgttaataggttttgatgttgtagaattagggtttgaaact |
62659 |
T |
|
| Q |
122 |
aaaattgatcgtagaaagagtagataatccgatga |
156 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||| |
|
|
| T |
62658 |
aaaattgattgtagaaagagtagataatccgatga |
62624 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 115; Significance: 3e-58; HSPs: 13)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 22 - 156
Target Start/End: Original strand, 7217256 - 7217389
Alignment:
| Q |
22 |
gagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaact |
121 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| |||||||||||||||||| ||||||||||| |
|
|
| T |
7217256 |
gagactaaccttctttaatcataagtatgtaatcctgaaaaagggtttaaccttgtagttgttaatagg-tttgatgttgtagaattagggtttgaaact |
7217354 |
T |
|
| Q |
122 |
aaaattgatcgtagaaagagtagataatccgatga |
156 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |
|
|
| T |
7217355 |
aaaattgatcgtagaaagagtagataatccgatga |
7217389 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 24 - 156
Target Start/End: Original strand, 23431461 - 23431593
Alignment:
| Q |
24 |
gactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaa |
123 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| |||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
23431461 |
gactaaccttctttaatcataagtatgtaatcctgaaaaagggtttaaccttgtagttgctaataggttttgatgttgtagaattagggtttgaaactaa |
23431560 |
T |
|
| Q |
124 |
aattgatcgtagaaagagtagataatccgatga |
156 |
Q |
| |
|
||||||| ||||||||||||||||||||||||| |
|
|
| T |
23431561 |
aattgattgtagaaagagtagataatccgatga |
23431593 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 24 - 156
Target Start/End: Complemental strand, 31734745 - 31734613
Alignment:
| Q |
24 |
gactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaa |
123 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||| |||||||||| |||| |||||||||||||||||||||||||| ||||| ||||||||||||| |
|
|
| T |
31734745 |
gactaaccttctttaatcataagtatgtaattctgaaaaagggtttaaccttgcagttgttaataggttttgatgttgtaaaattagggtttgaaactaa |
31734646 |
T |
|
| Q |
124 |
aattgatcgtagaaagagtagataatccgatga |
156 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |
|
|
| T |
31734645 |
aattgatcgtagaaagagtagataatccgatga |
31734613 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 24 - 156
Target Start/End: Complemental strand, 32259883 - 32259751
Alignment:
| Q |
24 |
gactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaa |
123 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| ||| |||||| ||||||||| |||||| |||||||||||||||||||| ||||||||||||| |
|
|
| T |
32259883 |
gactaaccttctttaatcataagtatgtaatcctgaaaaagagtttaaccttgtagtttttaataagttttgatgttgtagaattagggtttgaaactaa |
32259784 |
T |
|
| Q |
124 |
aattgatcgtagaaagagtagataatccgatga |
156 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |
|
|
| T |
32259783 |
aattgatcgtagaaagagtagataatccgatga |
32259751 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 27 - 156
Target Start/End: Complemental strand, 22557282 - 22557154
Alignment:
| Q |
27 |
taaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaaaat |
126 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
22557282 |
taaccttcttta-tcataagtatgtaatcctgaaaaagggtttaaccttgtagttgttaataggttttgatgttgtagaattcgggtttgaaactaaaat |
22557184 |
T |
|
| Q |
127 |
tgatcgtagaaagagtagataatccgatga |
156 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
22557183 |
tgatcgtagaaagagtagataatccgatga |
22557154 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 24 - 156
Target Start/End: Complemental strand, 25922039 - 25921907
Alignment:
| Q |
24 |
gactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaa |
123 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||| || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
25922039 |
gactaaccttatttaatcataagtatgtaatcctaaaaaagggtttaaccttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaa |
25921940 |
T |
|
| Q |
124 |
aattgatcgtagaaagagtagataatccgatga |
156 |
Q |
| |
|
||||||| |||||||||||| |||||| ||||| |
|
|
| T |
25921939 |
aattgattgtagaaagagtaaataatctgatga |
25921907 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 27 - 156
Target Start/End: Original strand, 18455090 - 18455219
Alignment:
| Q |
27 |
taaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaaaat |
126 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||| ||||| ||||||||||||||||||||||||| ||||||||||| |||||||||||| ||| |
|
|
| T |
18455090 |
taaccttctttaatcataagtatgtaatcctgaaaaaggttttaaccttgtagttgttaataggttttgatattgtagaattagggtttgaaactagaat |
18455189 |
T |
|
| Q |
127 |
tgatcgtagaaagagtagataatccgatga |
156 |
Q |
| |
|
|||| ||||||||||||||||||||||||| |
|
|
| T |
18455190 |
tgatagtagaaagagtagataatccgatga |
18455219 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 51 - 156
Target Start/End: Complemental strand, 23658099 - 23657994
Alignment:
| Q |
51 |
taatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaaaattgatcgtagaaagagtagataatc |
150 |
Q |
| |
|
|||| ||||| |||||||||| ||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
23658099 |
taattctgaaaaagggtttaaccttgtagttgttaataggttttgatgttgtagaataagggtttgaaactaaaattgattgtagaaagagtagataatc |
23658000 |
T |
|
| Q |
151 |
cgatga |
156 |
Q |
| |
|
|||||| |
|
|
| T |
23657999 |
cgatga |
23657994 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 22 - 106
Target Start/End: Complemental strand, 1818992 - 1818909
Alignment:
| Q |
22 |
gagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaa |
106 |
Q |
| |
|
|||||||||||||||||||||| ||||| || | ||||| |||||||||| |||||||||||||||| ||||||||||| ||||| |
|
|
| T |
1818992 |
gagactaaccttctttaatcatgagtatatagttctgaaaaagggtttaagcttgtagttgttaata-gttttgatgttatagaa |
1818909 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 22 - 85
Target Start/End: Original strand, 25601342 - 25601406
Alignment:
| Q |
22 |
gagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatc-ttgtagttgtta |
85 |
Q |
| |
|
||||||||||||| ||||||||||| ||||||| ||||| |||||||||| | |||||||||||| |
|
|
| T |
25601342 |
gagactaaccttcattaatcataagaatgtaattctgaaaaagggtttaacctttgtagttgtta |
25601406 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 113 - 156
Target Start/End: Complemental strand, 29045213 - 29045170
Alignment:
| Q |
113 |
tttgaaactaaaattgatcgtagaaagagtagataatccgatga |
156 |
Q |
| |
|
|||||||||||||||||| || |||||||||| ||||||||||| |
|
|
| T |
29045213 |
tttgaaactaaaattgattgttgaaagagtaggtaatccgatga |
29045170 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 37 - 106
Target Start/End: Complemental strand, 18982439 - 18982371
Alignment:
| Q |
37 |
taatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaa |
106 |
Q |
| |
|
||||||||||||| | | ||||| ||||||||||| ||||||||||| ||| ||||||||| ||||||| |
|
|
| T |
18982439 |
taatcataagtatatggttctgaaaaagggtttaattttgtagttgttgata-gttttgatgctgtagaa |
18982371 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 51 - 115
Target Start/End: Original strand, 24506157 - 24506220
Alignment:
| Q |
51 |
taatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggttt |
115 |
Q |
| |
|
|||| ||||| ||||||||||| ||||||||||| ||| ||||||||||| ||||| | |||||| |
|
|
| T |
24506157 |
taattctgaaaaagggtttaattttgtagttgttgata-gttttgatgttatagaagttaggttt |
24506220 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 115; Significance: 3e-58; HSPs: 14)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 22 - 156
Target Start/End: Original strand, 23968635 - 23968769
Alignment:
| Q |
22 |
gagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaact |
121 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| || ||||||| |||||||| |||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
23968635 |
gagactaaccttctttaatcataagtatgtaatcctgaaaaaaggtttaaccttgtagtcgttaataggttttgatgttgtagaattagggtttgaaact |
23968734 |
T |
|
| Q |
122 |
aaaattgatcgtagaaagagtagataatccgatga |
156 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |
|
|
| T |
23968735 |
aaaattgatcgtagaaagagtagataatccgatga |
23968769 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 24 - 156
Target Start/End: Complemental strand, 24718057 - 24717925
Alignment:
| Q |
24 |
gactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaa |
123 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||| | |||||||| |||||| |||| ||||||||||||||||| |||||| ||||||||||||| |
|
|
| T |
24718057 |
gactaacattctttaatcataagtatgtaatcctgaaaaggggtttaaccttgtatttgtcaataggttttgatgttgcagaattcgggtttgaaactaa |
24717958 |
T |
|
| Q |
124 |
aattgatcgtagaaagagtagataatccgatga |
156 |
Q |
| |
|
||||||| ||||||||||||||||||||||||| |
|
|
| T |
24717957 |
aattgattgtagaaagagtagataatccgatga |
24717925 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 24 - 156
Target Start/End: Original strand, 14179742 - 14179874
Alignment:
| Q |
24 |
gactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaa |
123 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||| || |||||| ||| || |||||||||| |||||||||||| |||||| ||||||||||||| |
|
|
| T |
14179742 |
gactaaccttctttaatcatgagtatgtaatcctgaaaaaaggtttatccttatacttgttaatagattttgatgttgtggaattagggtttgaaactaa |
14179841 |
T |
|
| Q |
124 |
aattgatcgtagaaagagtagataatccgatga |
156 |
Q |
| |
|
||||||| ||||||||||||||||||| ||||| |
|
|
| T |
14179842 |
aattgattgtagaaagagtagataatctgatga |
14179874 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 24 - 156
Target Start/End: Original strand, 14183480 - 14183612
Alignment:
| Q |
24 |
gactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaa |
123 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||| || | |||| ||| || ||||||||||||||||||||||| |||||| ||||||||||||| |
|
|
| T |
14183480 |
gactaaccttctttaatcatgagtatgtaatcctgaaaaaagatttatccttatacttgttaataggttttgatgttgtggaattagggtttgaaactaa |
14183579 |
T |
|
| Q |
124 |
aattgatcgtagaaagagtagataatccgatga |
156 |
Q |
| |
|
||||||| |||||||| |||||||||||||||| |
|
|
| T |
14183580 |
aattgattgtagaaagggtagataatccgatga |
14183612 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 22 - 89
Target Start/End: Complemental strand, 19647273 - 19647206
Alignment:
| Q |
22 |
gagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaatag |
89 |
Q |
| |
|
|||||||||||||||||||||||||||| |||| ||||| |||||||||||||||||||||||||||| |
|
|
| T |
19647273 |
gagactaaccttctttaatcataagtatataattctgaaaaagggtttaatcttgtagttgttaatag |
19647206 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 24 - 118
Target Start/End: Original strand, 20005985 - 20006078
Alignment:
| Q |
24 |
gactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaa |
118 |
Q |
| |
|
||||| |||||||||||||| ||| | |||| ||||| ||||||||||| |||| |||||||||| |||||||||| ||||| | ||||||||| |
|
|
| T |
20005985 |
gactagccttctttaatcatgagtctataattctgaaaaagggtttaattttgttgttgttaata-attttgatgttatagaagttaggtttgaa |
20006078 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 255 - 347
Target Start/End: Complemental strand, 43938779 - 43938684
Alignment:
| Q |
255 |
gattaactaggcgtaaatgattaatc-tctcaaatgctaattgtgctaaatgaagt--tgctacttatttgatgtggtaaatgtttgatgatgatt |
347 |
Q |
| |
|
|||| |||||| ||||||| |||||| ||| ||||| || || |||||||||||| || ||||| ||||||||||||||||||||||||||||| |
|
|
| T |
43938779 |
gattgactaggtgtaaatggttaatcgtctaaaatgttatttttgctaaatgaagagatgttacttctttgatgtggtaaatgtttgatgatgatt |
43938684 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 90 - 156
Target Start/End: Original strand, 149585 - 149652
Alignment:
| Q |
90 |
gttttgatgttgtagaa-ttaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatga |
156 |
Q |
| |
|
||||||||||| ||||| ||| ||||||||| |||||||||| || |||||||||| ||||||||||| |
|
|
| T |
149585 |
gttttgatgttatagaaattagggtttgaaattaaaattgattgttgaaagagtaggtaatccgatga |
149652 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 27 - 106
Target Start/End: Original strand, 25584280 - 25584358
Alignment:
| Q |
27 |
taaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaa |
106 |
Q |
| |
|
||||||||||||||||| ||||| |||| ||||| |||||||||| ||||| |||| | ||| ||||||||||| ||||| |
|
|
| T |
25584280 |
taaccttctttaatcatgagtatataattctgaaaaagggtttaaccttgtcgttgatgata-gttttgatgttatagaa |
25584358 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 24 - 106
Target Start/End: Original strand, 28652566 - 28652648
Alignment:
| Q |
24 |
gactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatc-ttgtagttgttaataggttttgatgttgtagaa |
106 |
Q |
| |
|
||||||||||| ||||||||||||||||||| ||||| ||||||||| | ||||||||||| || ||||||||||| ||||| |
|
|
| T |
28652566 |
gactaaccttcattaatcataagtatgtaattctgaaaaagggtttagcctttgtagttgttgtta-gttttgatgttatagaa |
28652648 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 379 - 420
Target Start/End: Original strand, 27609193 - 27609234
Alignment:
| Q |
379 |
gatgttgactagtgacgatgaaaatatatatgtataaagtga |
420 |
Q |
| |
|
|||||||||||||||| |||||||||||| |||||||||||| |
|
|
| T |
27609193 |
gatgttgactagtgacaatgaaaatatatttgtataaagtga |
27609234 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 84
Target Start/End: Complemental strand, 45535963 - 45535903
Alignment:
| Q |
24 |
gactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgtt |
84 |
Q |
| |
|
||||||||||||||||||| ||| | |||| ||||| |||||||||||||||| |||||| |
|
|
| T |
45535963 |
gactaaccttctttaatcacgagtctataattctgaaaaagggtttaatcttgttgttgtt |
45535903 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 113 - 156
Target Start/End: Original strand, 12626535 - 12626578
Alignment:
| Q |
113 |
tttgaaactaaaattgatcgtagaaagagtagataatccgatga |
156 |
Q |
| |
|
|||||||||||||||||| || |||||||||| ||||||||||| |
|
|
| T |
12626535 |
tttgaaactaaaattgattgttgaaagagtaggtaatccgatga |
12626578 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 350 - 382
Target Start/End: Original strand, 27609151 - 27609183
Alignment:
| Q |
350 |
tgatgatgagtatacatatataaagtgacgatg |
382 |
Q |
| |
|
||||||||||||||||| ||||||||||||||| |
|
|
| T |
27609151 |
tgatgatgagtatacatttataaagtgacgatg |
27609183 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 114; Significance: 1e-57; HSPs: 19)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 27 - 156
Target Start/End: Complemental strand, 18121638 - 18121509
Alignment:
| Q |
27 |
taaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaaaat |
126 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18121638 |
taaccttctttaatcataagtatgtaatcctgaaaaaggatttaaccttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaaaat |
18121539 |
T |
|
| Q |
127 |
tgatcgtagaaagagtagataatccgatga |
156 |
Q |
| |
|
|||||||| ||||||||||||||||||||| |
|
|
| T |
18121538 |
tgatcgtaaaaagagtagataatccgatga |
18121509 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 24 - 156
Target Start/End: Original strand, 14792577 - 14792709
Alignment:
| Q |
24 |
gactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaa |
123 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| ||||||||||||||| ||||||||||||| |
|
|
| T |
14792577 |
gactaaccttctttaatcataagtatgtaatcctgaaaaagggtttaaccttgtagttgttaataggtttcgatgttgtagaattagggtttgaaactaa |
14792676 |
T |
|
| Q |
124 |
aattgatcgtagaaagagtagataatccgatga |
156 |
Q |
| |
|
||||||||||||||||||||||||||| ||||| |
|
|
| T |
14792677 |
aattgatcgtagaaagagtagataatctgatga |
14792709 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 25 - 148
Target Start/End: Original strand, 38887102 - 38887225
Alignment:
| Q |
25 |
actaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaaa |
124 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
38887102 |
actaaccttctttaatcataagtatgtaatcctgaaaaagggtttaatcttgtagttgttaataggttttgatgttgtagaattagggtttgaaactaaa |
38887201 |
T |
|
| Q |
125 |
attgatcgtagaaagagtagataa |
148 |
Q |
| |
|
| |||||||||||||||||||||| |
|
|
| T |
38887202 |
agtgatcgtagaaagagtagataa |
38887225 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 24 - 156
Target Start/End: Complemental strand, 44892487 - 44892355
Alignment:
| Q |
24 |
gactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaa |
123 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||| |||| ||||| ||||||||||||||||||||||||| ||||||||||| ||||||||||||| |
|
|
| T |
44892487 |
gactaaccttctttaatcataagtatgtaatcttgaaaaaggatttaaccttgtagttgttaataggttttgatattgtagaattagggtttgaaactaa |
44892388 |
T |
|
| Q |
124 |
aattgatcgtagaaagagtagataatccgatga |
156 |
Q |
| |
|
||||||| ||||||||||||||||||||||||| |
|
|
| T |
44892387 |
aattgattgtagaaagagtagataatccgatga |
44892355 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 24 - 156
Target Start/End: Original strand, 41225468 - 41225600
Alignment:
| Q |
24 |
gactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaa |
123 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||||||| |||| ||||| |||||||||||||||||||||| ||| ||||||||||||| |
|
|
| T |
41225468 |
gactaaccttctttaatcataagtatgtaatcctgaaaaagggtttaaccttgcagttgataataggttttgatgttgtagagttagggtttgaaactaa |
41225567 |
T |
|
| Q |
124 |
aattgatcgtagaaagagtagataatccgatga |
156 |
Q |
| |
|
|||||| ||||||||||||||||||||||||| |
|
|
| T |
41225568 |
aattgaatgtagaaagagtagataatccgatga |
41225600 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 24 - 156
Target Start/End: Original strand, 41226721 - 41226853
Alignment:
| Q |
24 |
gactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaa |
123 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||||||| |||| ||||| |||||||||||||||||||||| ||| ||||||||||||| |
|
|
| T |
41226721 |
gactaaccttctttaatcataagtatgtaatcctgaaaaagggtttaaccttgcagttgataataggttttgatgttgtagagttagggtttgaaactaa |
41226820 |
T |
|
| Q |
124 |
aattgatcgtagaaagagtagataatccgatga |
156 |
Q |
| |
|
|||||| ||||||||||||||||||||||||| |
|
|
| T |
41226821 |
aattgaatgtagaaagagtagataatccgatga |
41226853 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 22 - 90
Target Start/End: Original strand, 21243770 - 21243838
Alignment:
| Q |
22 |
gagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaatagg |
90 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||| |||||||||| |||||||||||||||||| |
|
|
| T |
21243770 |
gagactaaccttctttaatcataaatatgtaatcctgaaaaagggtttaaccttgtagttgttaatagg |
21243838 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 24 - 108
Target Start/End: Complemental strand, 39061358 - 39061275
Alignment:
| Q |
24 |
gactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaatt |
108 |
Q |
| |
|
|||||||||||| ||||||| ||||| |||| ||||| || ||||||| |||||||||||| ||| ||||||||||| ||||||| |
|
|
| T |
39061358 |
gactaaccttctgtaatcatgagtatataattctgaaaaaaggtttaaccttgtagttgttgata-gttttgatgttatagaatt |
39061275 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 114 - 156
Target Start/End: Original strand, 21243841 - 21243883
Alignment:
| Q |
114 |
ttgaaactaaaattgatcgtagaaagagtagataatccgatga |
156 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
21243841 |
ttgaaactaaaattgattgtagaaagagtagataatccgatga |
21243883 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 90 - 156
Target Start/End: Complemental strand, 8306577 - 8306510
Alignment:
| Q |
90 |
gttttgatgttgtagaa-ttaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatga |
156 |
Q |
| |
|
||||||||||| ||||| ||| ||||||||| |||||||||| || |||||||||| ||||||||||| |
|
|
| T |
8306577 |
gttttgatgttatagaaattagggtttgaaattaaaattgattgttgaaagagtaggtaatccgatga |
8306510 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 113 - 156
Target Start/End: Original strand, 17901905 - 17901948
Alignment:
| Q |
113 |
tttgaaactaaaattgatcgtagaaagagtagataatccgatga |
156 |
Q |
| |
|
|||||||||||||||||| || |||||||||||||||||||||| |
|
|
| T |
17901905 |
tttgaaactaaaattgattgttgaaagagtagataatccgatga |
17901948 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 57 - 100
Target Start/End: Complemental strand, 40390155 - 40390112
Alignment:
| Q |
57 |
tgaagaagggtttaatcttgtagttgttaataggttttgatgtt |
100 |
Q |
| |
|
|||| |||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
40390155 |
tgaaaaagggtttaaccttgtagttgttaataggttttgatgtt |
40390112 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 22 - 120
Target Start/End: Original strand, 11808203 - 11808288
Alignment:
| Q |
22 |
gagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaac |
120 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||| ||||||| | |||||||| |
|
|
| T |
11808203 |
gagactaaccttctttaatcataagtatgtaat-------------ttaaccttgtagttgttaataggttttgatgtttcagaattaggatttgaaac |
11808288 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 113 - 157
Target Start/End: Complemental strand, 6834118 - 6834074
Alignment:
| Q |
113 |
tttgaaactaaaattgatcgtagaaagagtagataatccgatgat |
157 |
Q |
| |
|
|||||||||||||||||| || |||||||||| |||||||||||| |
|
|
| T |
6834118 |
tttgaaactaaaattgattgttgaaagagtaggtaatccgatgat |
6834074 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 115
Target Start/End: Original strand, 21188048 - 21188138
Alignment:
| Q |
24 |
gactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggttt |
115 |
Q |
| |
|
|||||||||| ||||||||| ||||| |||| ||| |||| |||||| ||||||||||| ||| ||||||||||| ||||| | |||||| |
|
|
| T |
21188048 |
gactaaccttttttaatcatgagtatataattttgagaaaggatttaattttgtagttgttgata-gttttgatgttatagaagttaggttt |
21188138 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 113 - 156
Target Start/End: Original strand, 21239146 - 21239189
Alignment:
| Q |
113 |
tttgaaactaaaattgatcgtagaaagagtagataatccgatga |
156 |
Q |
| |
|
|||||||||||||||||| || |||||||||| ||||||||||| |
|
|
| T |
21239146 |
tttgaaactaaaattgattgttgaaagagtaggtaatccgatga |
21239189 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 233 - 309
Target Start/End: Complemental strand, 16025420 - 16025342
Alignment:
| Q |
233 |
tgatatgtatacatgaaaagtggattaactaggcgtaaatgattaatc-tctc-aaatgctaattgtgctaaatgaagt |
309 |
Q |
| |
|
||||||||| || ||||| |||||||| |||| |||||||||||||| |||| ||||||||||||| |||||||||| |
|
|
| T |
16025420 |
tgatatgtaaacttgaaatgtggattagttaggtgtaaatgattaatcatctcaaaatgctaattgtattaaatgaagt |
16025342 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 51 - 114
Target Start/End: Complemental strand, 12710877 - 12710814
Alignment:
| Q |
51 |
taatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtag-aattaaggtt |
114 |
Q |
| |
|
|||| ||||| ||||||||||||||||||||||| || ||||||||||| ||| |||||||||| |
|
|
| T |
12710877 |
taattctgaaaaagggtttaatcttgtagttgttgtta-gttttgatgttatagaaattaaggtt |
12710814 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 51 - 114
Target Start/End: Original strand, 24719552 - 24719615
Alignment:
| Q |
51 |
taatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtag-aattaaggtt |
114 |
Q |
| |
|
|||| ||||| |||||||||| ||||||||||||| || ||||||||||| ||| |||||||||| |
|
|
| T |
24719552 |
taattctgaaaaagggtttaaccttgtagttgttatta-gttttgatgttatagaaattaaggtt |
24719615 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0401 (Bit Score: 113; Significance: 5e-57; HSPs: 1)
Name: scaffold0401
Description:
Target: scaffold0401; HSP #1
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 24 - 156
Target Start/End: Complemental strand, 8859 - 8727
Alignment:
| Q |
24 |
gactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaa |
123 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| ||||||| ||||||||||||||||||||| ||||||||||||| |
|
|
| T |
8859 |
gactaaccttctttaatcataagtatgtaatcctgaaaaagggtttaaccttgtagatgttaatcggttttgatgttgtagaattagggtttgaaactaa |
8760 |
T |
|
| Q |
124 |
aattgatcgtagaaagagtagataatccgatga |
156 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |
|
|
| T |
8759 |
aattgatcgtagaaagagtagataatccgatga |
8727 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 113; Significance: 5e-57; HSPs: 9)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 24 - 156
Target Start/End: Original strand, 8503902 - 8504034
Alignment:
| Q |
24 |
gactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaa |
123 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||||| ||| |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
8503902 |
gactaaccttcttcaatcataagtatgtaatcctgaacaagagtttaaccttgtagttgttaataggttttgatgttgtagaattagggtttgaaactaa |
8504001 |
T |
|
| Q |
124 |
aattgatcgtagaaagagtagataatccgatga |
156 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |
|
|
| T |
8504002 |
aattgatcgtagaaagagtagataatccgatga |
8504034 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 24 - 156
Target Start/End: Original strand, 8833220 - 8833352
Alignment:
| Q |
24 |
gactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaa |
123 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||| |||||||||| ||| ||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
8833220 |
gactgaccttctttaatcataagtatgtaatcctgaaaaagggtttaaccttatagttgttaataggttttgatgttgtagaattagggtttgaaactaa |
8833319 |
T |
|
| Q |
124 |
aattgatcgtagaaagagtagataatccgatga |
156 |
Q |
| |
|
||||||||||||||||||||||||||| ||||| |
|
|
| T |
8833320 |
aattgatcgtagaaagagtagataatctgatga |
8833352 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 24 - 156
Target Start/End: Original strand, 14025821 - 14025953
Alignment:
| Q |
24 |
gactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaa |
123 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| ||||||||||||| ||||| |||||||||||| |
|
|
| T |
14025821 |
gactaaccttctttaatcataagtatgtaatcctgaaaaagggtttaaccttgtagttgttaatagattttgatgttgtataattagggtttgaaactac |
14025920 |
T |
|
| Q |
124 |
aattgatcgtagaaagagtagataatccgatga |
156 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |
|
|
| T |
14025921 |
aattgatcgtagaaagagtagataatccgatga |
14025953 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 24 - 156
Target Start/End: Complemental strand, 26762440 - 26762308
Alignment:
| Q |
24 |
gactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaa |
123 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
26762440 |
gactaaccttctttaatcataattatgtaatcctgaaaaagggtttaaccttgtagttgttaataggttttgatgttgtagaattagggtttgaaactaa |
26762341 |
T |
|
| Q |
124 |
aattgatcgtagaaagagtagataatccgatga |
156 |
Q |
| |
|
|||||||||||||||||||| ||||| |||||| |
|
|
| T |
26762340 |
aattgatcgtagaaagagtaaataattcgatga |
26762308 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 22 - 156
Target Start/End: Complemental strand, 26750071 - 26749938
Alignment:
| Q |
22 |
gagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaact |
121 |
Q |
| |
|
|||||||||||| ||||||||||||||| |||||||||| | |||||||| |||||||||||||||| ||||||||||||||||||| ||| || ||||| |
|
|
| T |
26750071 |
gagactaaccttttttaatcataagtatataatcctgaaaaggggtttaaccttgtagttgttaataagttttgatgttgtagaatt-agggttaaaact |
26749973 |
T |
|
| Q |
122 |
aaaattgatcgtagaaagagtagataatccgatga |
156 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||| |
|
|
| T |
26749972 |
aaaattgatcatagaaagagtagataatccgatga |
26749938 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 24 - 109
Target Start/End: Original strand, 1626932 - 1627017
Alignment:
| Q |
24 |
gactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaatta |
109 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
1626932 |
gactaaccttctttaatcataagtatgtaatcctgaaaaagggtttaaccttgtagttgttaataggttttgatgttgtaaaatta |
1627017 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 24 - 106
Target Start/End: Complemental strand, 21504177 - 21504096
Alignment:
| Q |
24 |
gactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaa |
106 |
Q |
| |
|
|||||||||||||||||||||||||| | | ||||| |||||||||| |||||||||||| || ||||||||||| ||||| |
|
|
| T |
21504177 |
gactaaccttctttaatcataagtatatggttctgaaaaagggtttaagtttgtagttgttagta-gttttgatgttatagaa |
21504096 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 255 - 346
Target Start/End: Original strand, 23374572 - 23374666
Alignment:
| Q |
255 |
gattaactaggcgtaaatgattaatc-tctcaaatgctaattgtgctaaatga--agttgctacttatttgatgtggtaaatgtttgatgatgat |
346 |
Q |
| |
|
||||||||||| |||||||||||||| ||| |||||||| || |||||||||| | || | || |||||||||||||||||||||||||||| |
|
|
| T |
23374572 |
gattaactaggtgtaaatgattaatcgtctaaaatgctatttttgctaaatgaacatatgttgattctttgatgtggtaaatgtttgatgatgat |
23374666 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 57 - 100
Target Start/End: Complemental strand, 24068234 - 24068191
Alignment:
| Q |
57 |
tgaagaagggtttaatcttgtagttgttaataggttttgatgtt |
100 |
Q |
| |
|
|||| |||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
24068234 |
tgaaaaagggtttaaccttgtagttgttaataggttttgatgtt |
24068191 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0439 (Bit Score: 109; Significance: 1e-54; HSPs: 1)
Name: scaffold0439
Description:
Target: scaffold0439; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 24 - 156
Target Start/End: Complemental strand, 4459 - 4327
Alignment:
| Q |
24 |
gactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaa |
123 |
Q |
| |
|
|||||||||||||||||||||||||| |||||| ||| || ||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
4459 |
gactaaccttctttaatcataagtatataatcccgaaaaaaggtttaaccttgtagttgttaataggttttgatgttgtagaattagggtttgaaactaa |
4360 |
T |
|
| Q |
124 |
aattgatcgtagaaagagtagataatccgatga |
156 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |
|
|
| T |
4359 |
aattgatcgtagaaagagtagataatccgatga |
4327 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0371 (Bit Score: 109; Significance: 1e-54; HSPs: 2)
Name: scaffold0371
Description:
Target: scaffold0371; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 24 - 156
Target Start/End: Original strand, 10460 - 10592
Alignment:
| Q |
24 |
gactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaa |
123 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
10460 |
gactaaccttctttaatcataagtatgtaatcctgaaaaagggtttaacattgtagttgttaataggttttgatgttgtagaattagggtttgaaactaa |
10559 |
T |
|
| Q |
124 |
aattgatcgtagaaagagtagataatccgatga |
156 |
Q |
| |
|
||||||| |||||||||||||||||| |||||| |
|
|
| T |
10560 |
aattgattgtagaaagagtagataatacgatga |
10592 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0371; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 28 - 84
Target Start/End: Complemental strand, 3908 - 3853
Alignment:
| Q |
28 |
aaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgtt |
84 |
Q |
| |
|
|||||||||||| |||||||||||||||||||| |||| ||||| | |||||||||| |
|
|
| T |
3908 |
aaccttctttaaacataagtatgtaatcctgaaaaaggatttaa-catgtagttgtt |
3853 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 109; Significance: 1e-54; HSPs: 12)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 24 - 156
Target Start/End: Original strand, 21579220 - 21579352
Alignment:
| Q |
24 |
gactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaa |
123 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| |||||||||||||||||||| |||| |||||||| |
|
|
| T |
21579220 |
gactaaccttctttaatcataagtatgtaatcctgaaaaagggtttaaccttgtagttgttaatatgttttgatgttgtagaattagggttcgaaactaa |
21579319 |
T |
|
| Q |
124 |
aattgatcgtagaaagagtagataatccgatga |
156 |
Q |
| |
|
||||||| ||||||||||||||||||||||||| |
|
|
| T |
21579320 |
aattgattgtagaaagagtagataatccgatga |
21579352 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 24 - 156
Target Start/End: Complemental strand, 22474794 - 22474662
Alignment:
| Q |
24 |
gactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaa |
123 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
22474794 |
gactaaccttctttaatcataagtatgtaatcctgaaaaagggtttaaccttgtagttgttaataggttttgatgttgtagaattagggtttgaaactaa |
22474695 |
T |
|
| Q |
124 |
aattgatcgtagaaagagtagataatccgatga |
156 |
Q |
| |
|
||||||| || |||||||||||||||| ||||| |
|
|
| T |
22474694 |
aattgattgtcgaaagagtagataatctgatga |
22474662 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 24 - 156
Target Start/End: Original strand, 12037178 - 12037310
Alignment:
| Q |
24 |
gactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaa |
123 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||| |||||||||| ||||||||||||||||| ||||||||||||||||| | ||||||||||||| |
|
|
| T |
12037178 |
gactaaccttgtttaatcataagtatgtaatcctgaaaaagggtttaaccttgtagttgttaatagcttttgatgttgtagaatcagggtttgaaactaa |
12037277 |
T |
|
| Q |
124 |
aattgatcgtagaaagagtagataatccgatga |
156 |
Q |
| |
|
||||||| ||||||||||||||||||||||||| |
|
|
| T |
12037278 |
aattgattgtagaaagagtagataatccgatga |
12037310 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 24 - 156
Target Start/End: Original strand, 41680147 - 41680279
Alignment:
| Q |
24 |
gactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaa |
123 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
41680147 |
gactaaccttctttaatcataagtatgtaatcctgataaagggtttaaccttgtagttgttaataggttttgatgttgtagaattagggtttgaaactaa |
41680246 |
T |
|
| Q |
124 |
aattgatcgtagaaagagtagataatccgatga |
156 |
Q |
| |
|
|||||| |||||| |||||||||||||||||| |
|
|
| T |
41680247 |
aattgactgtagaaggagtagataatccgatga |
41680279 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 25 - 156
Target Start/End: Original strand, 29762883 - 29763014
Alignment:
| Q |
25 |
actaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaaa |
124 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| |||||||||||||||||||| ||||||||||||| |
|
|
| T |
29762883 |
actaaccttctttaatcataagtatgtaatcctgaaaaagggtttaaccttgtagttgttaataagttttgatgttgtagaattagagtttgaaactaaa |
29762982 |
T |
|
| Q |
125 |
attgatcgtagaaagagtagataatccgatga |
156 |
Q |
| |
|
|||||| |||||||||||||||||| |||||| |
|
|
| T |
29762983 |
attgattgtagaaagagtagataatgcgatga |
29763014 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 24 - 156
Target Start/End: Original strand, 17978430 - 17978562
Alignment:
| Q |
24 |
gactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaa |
123 |
Q |
| |
|
|||||| ||||| |||||||||||||||||||||||| |||| ||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
17978430 |
gactaaacttctataatcataagtatgtaatcctgaaaaaggatttaaccttgtagttgttaataggttttgatgttgtagaattagggtttgaaactaa |
17978529 |
T |
|
| Q |
124 |
aattgatcgtagaaagagtagataatccgatga |
156 |
Q |
| |
|
||||||| ||||||||| |||||||||||||| |
|
|
| T |
17978530 |
aattgattatagaaagagcagataatccgatga |
17978562 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 51 - 156
Target Start/End: Complemental strand, 22208279 - 22208174
Alignment:
| Q |
51 |
taatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaaaattgatcgtagaaagagtagataatc |
150 |
Q |
| |
|
|||| ||||| |||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22208279 |
taattctgaaaaagggtttaaccttgtagttgttaataggttttgatgttgtagaattagggtttgaaactaaaattgatcgtagaaagagtagataatc |
22208180 |
T |
|
| Q |
151 |
cgatga |
156 |
Q |
| |
|
|||||| |
|
|
| T |
22208179 |
cgatga |
22208174 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 24 - 135
Target Start/End: Original strand, 36405146 - 36405257
Alignment:
| Q |
24 |
gactaaccttctttaatcataagtatgtaat-cctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaacta |
122 |
Q |
| |
|
||||||| ||||||||||||||||||||||| |||||| |||||||||| ||||||||||||||||||||||||||| ||||||||| |||||||||||| |
|
|
| T |
36405146 |
gactaactttctttaatcataagtatgtaatccctgaa-aagggtttaaccttgtagttgttaataggttttgatgtcgtagaattatggtttgaaacta |
36405244 |
T |
|
| Q |
123 |
aaattgatcgtag |
135 |
Q |
| |
|
|||||||| |||| |
|
|
| T |
36405245 |
aaattgattgtag |
36405257 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 62 - 156
Target Start/End: Original strand, 22258359 - 22258453
Alignment:
| Q |
62 |
aagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatga |
156 |
Q |
| |
|
|||||||||| |||| ||||||| |||||||||||||||||||||||| | ||||||||||||| |||| ||||||||||||||||||||||||| |
|
|
| T |
22258359 |
aagggtttaaccttgcagttgttgataggttttgatgttgtagaattaggttttgaaactaaaactgattgtagaaagagtagataatccgatga |
22258453 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 100
Target Start/End: Complemental strand, 20879510 - 20879435
Alignment:
| Q |
24 |
gactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgtt |
100 |
Q |
| |
|
|||||||||||||||||||||||||| | | || || |||||||||| ||||||||| ||||| |||||||||||| |
|
|
| T |
20879510 |
gactaaccttctttaatcataagtatatggttctaaaaaagggtttaagcttgtagttattaat-ggttttgatgtt |
20879435 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 57 - 100
Target Start/End: Complemental strand, 22966815 - 22966772
Alignment:
| Q |
57 |
tgaagaagggtttaatcttgtagttgttaataggttttgatgtt |
100 |
Q |
| |
|
|||| |||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
22966815 |
tgaaaaagggtttaaccttgtagttgttaataggttttgatgtt |
22966772 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 62 - 100
Target Start/End: Original strand, 21697512 - 21697550
Alignment:
| Q |
62 |
aagggtttaatcttgtagttgttaataggttttgatgtt |
100 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
21697512 |
aagggtttaacattgtagttgttaataggttttgatgtt |
21697550 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0385 (Bit Score: 107; Significance: 2e-53; HSPs: 1)
Name: scaffold0385
Description:
Target: scaffold0385; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 22 - 156
Target Start/End: Complemental strand, 385 - 251
Alignment:
| Q |
22 |
gagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaact |
121 |
Q |
| |
|
|||| ||| |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
385 |
gagattaatcttctttaatcataagtatgtaatcctgaaaaagggtttaaccttgtagttgttaataggttttgatgttgtagaattagggtttgaaact |
286 |
T |
|
| Q |
122 |
aaaattgatcgtagaaagagtagataatccgatga |
156 |
Q |
| |
|
|||||| || ||||||||||||||||||||||||| |
|
|
| T |
285 |
aaaatttatagtagaaagagtagataatccgatga |
251 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0039 (Bit Score: 105; Significance: 3e-52; HSPs: 1)
Name: scaffold0039
Description:
Target: scaffold0039; HSP #1
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 24 - 156
Target Start/End: Original strand, 9942 - 10074
Alignment:
| Q |
24 |
gactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaa |
123 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||| ||||||||| ||||||||| |||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
9942 |
gactaaccttctttaatcataagtatgtaattctgaaaaagggtttagccttgtagtttctaataggttttgatgttgtagaattagggtttgaaactaa |
10041 |
T |
|
| Q |
124 |
aattgatcgtagaaagagtagataatccgatga |
156 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |
|
|
| T |
10042 |
aattgatcgtagaaagagtagataatccgatga |
10074 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0011 (Bit Score: 101; Significance: 7e-50; HSPs: 1)
Name: scaffold0011
Description:
Target: scaffold0011; HSP #1
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 24 - 156
Target Start/End: Complemental strand, 33492 - 33360
Alignment:
| Q |
24 |
gactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaa |
123 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||| |||||||||| | ||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
33492 |
gactaaccttctttaatcataagtatttaatcctgaaaaagggtttaaacgtgtagttgttaataggttttgatgttgtagaattagggtttgaaactaa |
33393 |
T |
|
| Q |
124 |
aattgatcgtagaaagagtagataatccgatga |
156 |
Q |
| |
|
||||||| || |||| ||||||||||||||||| |
|
|
| T |
33392 |
aattgattgttgaaatagtagataatccgatga |
33360 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0048 (Bit Score: 95; Significance: 3e-46; HSPs: 1)
Name: scaffold0048
Description:
Target: scaffold0048; HSP #1
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 24 - 156
Target Start/End: Complemental strand, 57011 - 56882
Alignment:
| Q |
24 |
gactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaa |
123 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||| ||| ||||||| ||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
57011 |
gactaaccttctttaatcataagtatgtaatcctgaaaaagg---taaccttgtagatgttaataggttttgatgttgtagaattagggtttgaaactaa |
56915 |
T |
|
| Q |
124 |
aattgatcgtagaaagagtagataatccgatga |
156 |
Q |
| |
|
||||||| |||||||||||||||||| |||||| |
|
|
| T |
56914 |
aattgattgtagaaagagtagataattcgatga |
56882 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0431 (Bit Score: 79; Significance: 9e-37; HSPs: 1)
Name: scaffold0431
Description:
Target: scaffold0431; HSP #1
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 62 - 156
Target Start/End: Complemental strand, 5630 - 5536
Alignment:
| Q |
62 |
aagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatga |
156 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5630 |
aagggtttaactttgtagttgttaataggttttgatgttgtagaattagggtttggaactaaaattgatcgtagaaagagtagataatccgatga |
5536 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1437 (Bit Score: 76; Significance: 6e-35; HSPs: 1)
Name: scaffold1437
Description:
Target: scaffold1437; HSP #1
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 37 - 156
Target Start/End: Original strand, 321 - 440
Alignment:
| Q |
37 |
taatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaaaattgatcgtaga |
136 |
Q |
| |
|
||||||||||||||| |||| || |||||||||| |||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| || | |
|
|
| T |
321 |
taatcataagtatgtcatccaaaaaaagggtttaacattgtagttgttaataggttttgatgttgtaaaattaaggttggaaactaaaattgatcataaa |
420 |
T |
|
| Q |
137 |
aagagtagataatccgatga |
156 |
Q |
| |
|
|||| ||||||||||||||| |
|
|
| T |
421 |
aagattagataatccgatga |
440 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1160 (Bit Score: 74; Significance: 9e-34; HSPs: 1)
Name: scaffold1160
Description:
Target: scaffold1160; HSP #1
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 63 - 156
Target Start/End: Complemental strand, 683 - 590
Alignment:
| Q |
63 |
agggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatga |
156 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |||||||||||| |
|
|
| T |
683 |
agggtttaacattgtagttgttaataggttttgatgttgtagaattagggtttgaaactaaaattgatcatagaaagagtatataatccgatga |
590 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0108 (Bit Score: 73; Significance: 3e-33; HSPs: 1)
Name: scaffold0108
Description:
Target: scaffold0108; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 49 - 156
Target Start/End: Complemental strand, 6430 - 6322
Alignment:
| Q |
49 |
tgtaatcctgaagaagggtttaatcttgtagttgttaataggttttga-tgttgtagaattaaggtttgaaactaaaattgatcgtagaaagagtagata |
147 |
Q |
| |
|
|||||| ||||| ||||| ||||||||||||||||| ||||||||| | ||||||||||||| |||||||||||||||||||| |||||||||||||||| |
|
|
| T |
6430 |
tgtaattctgaaaaagggattaatcttgtagttgtttataggtttttaatgttgtagaattagggtttgaaactaaaattgattgtagaaagagtagata |
6331 |
T |
|
| Q |
148 |
atccgatga |
156 |
Q |
| |
|
||||||||| |
|
|
| T |
6330 |
atccgatga |
6322 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0121 (Bit Score: 71; Significance: 5e-32; HSPs: 1)
Name: scaffold0121
Description:
Target: scaffold0121; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 62 - 156
Target Start/End: Complemental strand, 20199 - 20105
Alignment:
| Q |
62 |
aagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatga |
156 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||| |||||||| ||||||||| |||||||||| ||||||||| ||||||||||||||| |
|
|
| T |
20199 |
aagggtttaaccttgtagttgttaataggttttgatgttttagaattagggtttgaaattaaaattgattgtagaaagaatagataatccgatga |
20105 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0021 (Bit Score: 59; Significance: 8e-25; HSPs: 1)
Name: scaffold0021
Description:
Target: scaffold0021; HSP #1
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 94 - 156
Target Start/End: Complemental strand, 169408 - 169346
Alignment:
| Q |
94 |
tgatgttgtagaattaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatga |
156 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
169408 |
tgatgttgtagaattagggtttgaaactaaaattgatcgtagaaagagtagataatccgatga |
169346 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0092 (Bit Score: 54; Significance: 7e-22; HSPs: 1)
Name: scaffold0092
Description:
Target: scaffold0092; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 24 - 156
Target Start/End: Original strand, 38456 - 38588
Alignment:
| Q |
24 |
gactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaacta- |
122 |
Q |
| |
|
|||||||||||||||||||| ||||| |||| ||||| ||||||||||| ||||||||||||||| ||||||||||| ||||| | |||||| ||| || |
|
|
| T |
38456 |
gactaaccttctttaatcatgagtatataattctgaaaaagggtttaattttgtagttgttaata-gttttgatgttatagaagttaggttttaaattac |
38554 |
T |
|
| Q |
123 |
aaattgatcgtagaaagagtagataatccgatga |
156 |
Q |
| |
|
|| ||||| || ||||| |||| |||||| |||| |
|
|
| T |
38555 |
aatttgattgttgaaagtgtaggtaatccaatga |
38588 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0217 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0217
Description:
Target: scaffold0217; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 24 - 89
Target Start/End: Complemental strand, 28751 - 28686
Alignment:
| Q |
24 |
gactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaatag |
89 |
Q |
| |
|
|||||||||||||||||||||||||| |||| ||||| ||| |||||||||||||||||||||||| |
|
|
| T |
28751 |
gactaaccttctttaatcataagtatataattctgaaaaagcgtttaatcttgtagttgttaatag |
28686 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0103 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0103
Description:
Target: scaffold0103; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 213 - 309
Target Start/End: Complemental strand, 30532 - 30436
Alignment:
| Q |
213 |
aatgatgattgatttggctatgatatgtatacatgaaaagtggattaactaggcgtaaatgattaatc-tctcaaatgctaattgtgctaaatgaagt |
309 |
Q |
| |
|
||||||| || ||||||||| ||||||||||| | ||| ||||||||||||||||||||||||||||| | ||||||||||||||| |||||||||| |
|
|
| T |
30532 |
aatgatggttaatttggctacgatatgtatactt-aaatgtggattaactaggcgtaaatgattaatcgtttcaaatgctaattgtaataaatgaagt |
30436 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0165 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0165
Description:
Target: scaffold0165; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 22 - 115
Target Start/End: Complemental strand, 31969 - 31877
Alignment:
| Q |
22 |
gagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggttt |
115 |
Q |
| |
|
|||||||||| ||||||||||| ||||| | || ||||| ||||||||||| || |||||||||||| ||||||||||||||||| | |||||| |
|
|
| T |
31969 |
gagactaaccatctttaatcatgagtatatgattctgaaaaagggtttaattttatagttgttaata-gttttgatgttgtagaagttaggttt |
31877 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0337 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0337
Description:
Target: scaffold0337; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 24 - 115
Target Start/End: Complemental strand, 3242 - 3152
Alignment:
| Q |
24 |
gactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggttt |
115 |
Q |
| |
|
|||||||||||||||||||| ||||| |||| |||| ||||||||||| ||||||||||| ||| ||||||||||| ||||| | |||||| |
|
|
| T |
3242 |
gactaaccttctttaatcatgagtatataattatgaaaaagggtttaattttgtagttgttgata-gttttgatgttatagaagttaggttt |
3152 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0017 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0017
Description:
Target: scaffold0017; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 24 - 115
Target Start/End: Complemental strand, 23651 - 23561
Alignment:
| Q |
24 |
gactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggttt |
115 |
Q |
| |
|
|||| ||||||||||||||| ||||| |||| || || ||||||||||| ||||||||||||||| ||||||||||| ||||| | |||||| |
|
|
| T |
23651 |
gactgaccttctttaatcatgagtatataattctaaaaaagggtttaattttgtagttgttaata-gttttgatgttatagaagttaggttt |
23561 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1939 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold1939
Description:
Target: scaffold1939; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 24 - 151
Target Start/End: Complemental strand, 165 - 38
Alignment:
| Q |
24 |
gactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaact-a |
122 |
Q |
| |
|
|||||||||||||||||||| ||||| | | ||||| |||||||| | ||||||||||||||| ||||||||||| ||||| | ||| || ||| | | |
|
|
| T |
165 |
gactaaccttctttaatcattagtatatggttctgaaaaagggttttaatttgtagttgttaata-gttttgatgttatagaagttagggttaaaattga |
67 |
T |
|
| Q |
123 |
aaattgatcgtagaaagagtagataatcc |
151 |
Q |
| |
|
|||||||| || |||||||||| |||||| |
|
|
| T |
66 |
aaattgattgttgaaagagtaggtaatcc |
38 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0058 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0058
Description:
Target: scaffold0058; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 26 - 115
Target Start/End: Original strand, 59672 - 59760
Alignment:
| Q |
26 |
ctaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggttt |
115 |
Q |
| |
|
|||||||||||||||||| ||||| |||| ||||| |||||||||| ||||||||||| ||| |||||||| || ||||| | |||||| |
|
|
| T |
59672 |
ctaaccttctttaatcatgagtatataattctgaaaaagggtttaactttgtagttgttgata-gttttgatattatagaaattaggttt |
59760 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1102 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold1102
Description:
Target: scaffold1102; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 88
Target Start/End: Original strand, 1965 - 2029
Alignment:
| Q |
24 |
gactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaata |
88 |
Q |
| |
|
|||||||||||||||||||| ||| | |||| ||||| ||||||||||| |||| |||||||||| |
|
|
| T |
1965 |
gactaaccttctttaatcatgagtctataattctgaaaaagggtttaattttgttgttgttaata |
2029 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0394 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0394
Description:
Target: scaffold0394; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 24 - 115
Target Start/End: Original strand, 7528 - 7618
Alignment:
| Q |
24 |
gactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggttt |
115 |
Q |
| |
|
||||||||||||||||| || ||||| | || ||||| ||||||||||| || |||||||| ||| ||||||||||| ||||| | |||||| |
|
|
| T |
7528 |
gactaaccttctttaattatgagtatatgattctgaaaaagggtttaattttatagttgttgata-gttttgatgttatagaagttaggttt |
7618 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0145 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0145
Description:
Target: scaffold0145; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 57 - 100
Target Start/End: Complemental strand, 8129 - 8086
Alignment:
| Q |
57 |
tgaagaagggtttaatcttgtagttgttaataggttttgatgtt |
100 |
Q |
| |
|
|||| |||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
8129 |
tgaaaaagggtttaaccttgtagttgttaataggttttgatgtt |
8086 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0120 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0120
Description:
Target: scaffold0120; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 57 - 100
Target Start/End: Complemental strand, 29316 - 29273
Alignment:
| Q |
57 |
tgaagaagggtttaatcttgtagttgttaataggttttgatgtt |
100 |
Q |
| |
|
|||| |||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
29316 |
tgaaaaagggtttaaccttgtagttgttaataggttttgatgtt |
29273 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0016 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0016
Description:
Target: scaffold0016; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 255 - 346
Target Start/End: Complemental strand, 17893 - 17799
Alignment:
| Q |
255 |
gattaactaggcgtaaatgattaatc-tctcaaatgctaattgtgctaaatga--agttgctacttatttgatgtggtaaatgtttgatgatgat |
346 |
Q |
| |
|
||||||||||| |||||||||||||| ||| |||||||| || |||||||||| | || | || |||||||||||||||||||||||||||| |
|
|
| T |
17893 |
gattaactaggtgtaaatgattaatcgtctaaaatgctatttttgctaaatgaacatatgttgattctttgatgtggtaaatgtttgatgatgat |
17799 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0300 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0300
Description:
Target: scaffold0300; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 233 - 309
Target Start/End: Original strand, 14015 - 14092
Alignment:
| Q |
233 |
tgatatgtatacatgaaaagtggattaactaggcgtaaatgattaatc-tctcaaatgctaattgtgctaaatgaagt |
309 |
Q |
| |
|
||||||| | || ||||| ||||||||||||||| ||||||||||||| ||| |||||||||| || |||||||||| |
|
|
| T |
14015 |
tgatatgcaaacctgaaatgtggattaactaggcataaatgattaatcgtctttaatgctaattttgttaaatgaagt |
14092 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0594 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0594
Description:
Target: scaffold0594; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 113 - 156
Target Start/End: Complemental strand, 2189 - 2146
Alignment:
| Q |
113 |
tttgaaactaaaattgatcgtagaaagagtagataatccgatga |
156 |
Q |
| |
|
|||||||||||||||||| || |||||||||| ||||||||||| |
|
|
| T |
2189 |
tttgaaactaaaattgattgttgaaagagtaggtaatccgatga |
2146 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0485 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0485
Description:
Target: scaffold0485; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 319 - 358
Target Start/End: Complemental strand, 4496 - 4457
Alignment:
| Q |
319 |
tttgatgtggtaaatgtttgatgatgatttttgatgatga |
358 |
Q |
| |
|
||||||||||||| ||||||||||||||| |||||||||| |
|
|
| T |
4496 |
tttgatgtggtaattgtttgatgatgattattgatgatga |
4457 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1800 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold1800
Description:
Target: scaffold1800; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 24 - 118
Target Start/End: Complemental strand, 645 - 552
Alignment:
| Q |
24 |
gactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaa |
118 |
Q |
| |
|
|||||||||||||||||||| ||| | |||| || || || |||||||| |||| |||||| ||| |||||||||| ||||| | ||||||||| |
|
|
| T |
645 |
gactaaccttctttaatcatgagtctataattcttaaaaatggtttaattttgttgttgttgata-attttgatgttatagaagttaggtttgaa |
552 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0261 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0261
Description:
Target: scaffold0261; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 24 - 105
Target Start/End: Original strand, 6434 - 6514
Alignment:
| Q |
24 |
gactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatc-ttgtagttgttaataggttttgatgttgtaga |
105 |
Q |
| |
|
||||||||||| ||||||||||||||||||| || || |||||||||| | ||||||||||| || ||||||||||| |||| |
|
|
| T |
6434 |
gactaaccttcattaatcataagtatgtaattct-aaaaagggtttaacctttgtagttgttgtta-gttttgatgttataga |
6514 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0213 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0213
Description:
Target: scaffold0213; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 112
Target Start/End: Complemental strand, 19217 - 19157
Alignment:
| Q |
51 |
taatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaagg |
112 |
Q |
| |
|
|||| ||||| |||||||||| ||||||||||||| || ||||||||||| ||||| ||||| |
|
|
| T |
19217 |
taattctgaaaaagggtttaaccttgtagttgttatta-gttttgatgttatagaaataagg |
19157 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0125 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0125
Description:
Target: scaffold0125; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 24 - 84
Target Start/End: Complemental strand, 28589 - 28528
Alignment:
| Q |
24 |
gactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatc-ttgtagttgtt |
84 |
Q |
| |
|
||||||||||| |||||||| ||||| |||| ||||| |||||||||| | ||||||||||| |
|
|
| T |
28589 |
gactaaccttccttaatcatgagtatataattctgaaaaagggtttaacctttgtagttgtt |
28528 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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