View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16140_low_5 (Length: 444)

Name: NF16140_low_5
Description: NF16140
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16140_low_5
NF16140_low_5
[»] scaffold0020 (1 HSPs)
scaffold0020 (24-156)||(174127-174259)
[»] chr4 (20 HSPs)
chr4 (25-156)||(19565933-19566064)
chr4 (22-156)||(33243306-33243440)
chr4 (24-156)||(12623222-12623354)
chr4 (24-156)||(40230212-40230344)
chr4 (24-156)||(44023617-44023749)
chr4 (24-156)||(46741105-46741237)
chr4 (51-156)||(33186808-33186913)
chr4 (62-156)||(12424345-12424439)
chr4 (213-309)||(355687-355784)
chr4 (379-432)||(355494-355547)
chr4 (24-156)||(18462929-18463061)
chr4 (379-435)||(12319050-12319106)
chr4 (25-106)||(14477588-14477668)
chr4 (23-71)||(45314096-45314144)
chr4 (90-156)||(16296777-16296844)
chr4 (24-71)||(26921523-26921570)
chr4 (57-100)||(20150787-20150830)
chr4 (24-106)||(13165089-13165170)
chr4 (57-106)||(2424435-2424483)
chr4 (337-377)||(355562-355602)
[»] scaffold0630 (1 HSPs)
scaffold0630 (24-156)||(8969-9101)
[»] chr7 (9 HSPs)
chr7 (24-156)||(9743093-9743225)
chr7 (28-156)||(14317978-14318106)
chr7 (24-156)||(15119321-15119453)
chr7 (24-156)||(14160870-14161002)
chr7 (65-156)||(43276799-43276890)
chr7 (62-153)||(8513806-8513898)
chr7 (22-84)||(42565845-42565907)
chr7 (62-109)||(8488147-8488194)
chr7 (24-118)||(33060383-33060476)
[»] chr3 (14 HSPs)
chr3 (24-156)||(53646073-53646205)
chr3 (24-156)||(54330321-54330453)
chr3 (56-156)||(14152446-14152546)
chr3 (57-156)||(5215552-5215651)
chr3 (213-347)||(511652-511789)
chr3 (24-115)||(21845666-21845756)
chr3 (24-106)||(48631288-48631369)
chr3 (88-156)||(15566418-15566486)
chr3 (379-432)||(511880-511935)
chr3 (51-99)||(15566706-15566754)
chr3 (337-382)||(511825-511870)
chr3 (22-115)||(3160639-3160731)
chr3 (113-156)||(45803440-45803483)
chr3 (255-295)||(10289882-10289923)
[»] scaffold0063 (1 HSPs)
scaffold0063 (22-156)||(62624-62758)
[»] chr6 (13 HSPs)
chr6 (22-156)||(7217256-7217389)
chr6 (24-156)||(23431461-23431593)
chr6 (24-156)||(31734613-31734745)
chr6 (24-156)||(32259751-32259883)
chr6 (27-156)||(22557154-22557282)
chr6 (24-156)||(25921907-25922039)
chr6 (27-156)||(18455090-18455219)
chr6 (51-156)||(23657994-23658099)
chr6 (22-106)||(1818909-1818992)
chr6 (22-85)||(25601342-25601406)
chr6 (113-156)||(29045170-29045213)
chr6 (37-106)||(18982371-18982439)
chr6 (51-115)||(24506157-24506220)
[»] chr2 (14 HSPs)
chr2 (22-156)||(23968635-23968769)
chr2 (24-156)||(24717925-24718057)
chr2 (24-156)||(14179742-14179874)
chr2 (24-156)||(14183480-14183612)
chr2 (22-89)||(19647206-19647273)
chr2 (24-118)||(20005985-20006078)
chr2 (255-347)||(43938684-43938779)
chr2 (90-156)||(149585-149652)
chr2 (27-106)||(25584280-25584358)
chr2 (24-106)||(28652566-28652648)
chr2 (379-420)||(27609193-27609234)
chr2 (24-84)||(45535903-45535963)
chr2 (113-156)||(12626535-12626578)
chr2 (350-382)||(27609151-27609183)
[»] chr1 (19 HSPs)
chr1 (27-156)||(18121509-18121638)
chr1 (24-156)||(14792577-14792709)
chr1 (25-148)||(38887102-38887225)
chr1 (24-156)||(44892355-44892487)
chr1 (24-156)||(41225468-41225600)
chr1 (24-156)||(41226721-41226853)
chr1 (22-90)||(21243770-21243838)
chr1 (24-108)||(39061275-39061358)
chr1 (114-156)||(21243841-21243883)
chr1 (90-156)||(8306510-8306577)
chr1 (113-156)||(17901905-17901948)
chr1 (57-100)||(40390112-40390155)
chr1 (22-120)||(11808203-11808288)
chr1 (113-157)||(6834074-6834118)
chr1 (24-115)||(21188048-21188138)
chr1 (113-156)||(21239146-21239189)
chr1 (233-309)||(16025342-16025420)
chr1 (51-114)||(12710814-12710877)
chr1 (51-114)||(24719552-24719615)
[»] scaffold0401 (1 HSPs)
scaffold0401 (24-156)||(8727-8859)
[»] chr5 (9 HSPs)
chr5 (24-156)||(8503902-8504034)
chr5 (24-156)||(8833220-8833352)
chr5 (24-156)||(14025821-14025953)
chr5 (24-156)||(26762308-26762440)
chr5 (22-156)||(26749938-26750071)
chr5 (24-109)||(1626932-1627017)
chr5 (24-106)||(21504096-21504177)
chr5 (255-346)||(23374572-23374666)
chr5 (57-100)||(24068191-24068234)
[»] scaffold0439 (1 HSPs)
scaffold0439 (24-156)||(4327-4459)
[»] scaffold0371 (2 HSPs)
scaffold0371 (24-156)||(10460-10592)
scaffold0371 (28-84)||(3853-3908)
[»] chr8 (12 HSPs)
chr8 (24-156)||(21579220-21579352)
chr8 (24-156)||(22474662-22474794)
chr8 (24-156)||(12037178-12037310)
chr8 (24-156)||(41680147-41680279)
chr8 (25-156)||(29762883-29763014)
chr8 (24-156)||(17978430-17978562)
chr8 (51-156)||(22208174-22208279)
chr8 (24-135)||(36405146-36405257)
chr8 (62-156)||(22258359-22258453)
chr8 (24-100)||(20879435-20879510)
chr8 (57-100)||(22966772-22966815)
chr8 (62-100)||(21697512-21697550)
[»] scaffold0385 (1 HSPs)
scaffold0385 (22-156)||(251-385)
[»] scaffold0039 (1 HSPs)
scaffold0039 (24-156)||(9942-10074)
[»] scaffold0011 (1 HSPs)
scaffold0011 (24-156)||(33360-33492)
[»] scaffold0048 (1 HSPs)
scaffold0048 (24-156)||(56882-57011)
[»] scaffold0431 (1 HSPs)
scaffold0431 (62-156)||(5536-5630)
[»] scaffold1437 (1 HSPs)
scaffold1437 (37-156)||(321-440)
[»] scaffold1160 (1 HSPs)
scaffold1160 (63-156)||(590-683)
[»] scaffold0108 (1 HSPs)
scaffold0108 (49-156)||(6322-6430)
[»] scaffold0121 (1 HSPs)
scaffold0121 (62-156)||(20105-20199)
[»] scaffold0021 (1 HSPs)
scaffold0021 (94-156)||(169346-169408)
[»] scaffold0092 (1 HSPs)
scaffold0092 (24-156)||(38456-38588)
[»] scaffold0217 (1 HSPs)
scaffold0217 (24-89)||(28686-28751)
[»] scaffold0103 (1 HSPs)
scaffold0103 (213-309)||(30436-30532)
[»] scaffold0165 (1 HSPs)
scaffold0165 (22-115)||(31877-31969)
[»] scaffold0337 (1 HSPs)
scaffold0337 (24-115)||(3152-3242)
[»] scaffold0017 (1 HSPs)
scaffold0017 (24-115)||(23561-23651)
[»] scaffold1939 (1 HSPs)
scaffold1939 (24-151)||(38-165)
[»] scaffold0058 (1 HSPs)
scaffold0058 (26-115)||(59672-59760)
[»] scaffold1102 (1 HSPs)
scaffold1102 (24-88)||(1965-2029)
[»] scaffold0394 (1 HSPs)
scaffold0394 (24-115)||(7528-7618)
[»] scaffold0145 (1 HSPs)
scaffold0145 (57-100)||(8086-8129)
[»] scaffold0120 (1 HSPs)
scaffold0120 (57-100)||(29273-29316)
[»] scaffold0016 (1 HSPs)
scaffold0016 (255-346)||(17799-17893)
[»] scaffold0300 (1 HSPs)
scaffold0300 (233-309)||(14015-14092)
[»] scaffold0594 (1 HSPs)
scaffold0594 (113-156)||(2146-2189)
[»] scaffold0485 (1 HSPs)
scaffold0485 (319-358)||(4457-4496)
[»] scaffold1800 (1 HSPs)
scaffold1800 (24-118)||(552-645)
[»] scaffold0261 (1 HSPs)
scaffold0261 (24-105)||(6434-6514)
[»] scaffold0213 (1 HSPs)
scaffold0213 (51-112)||(19157-19217)
[»] scaffold0125 (1 HSPs)
scaffold0125 (24-84)||(28528-28589)


Alignment Details
Target: scaffold0020 (Bit Score: 121; Significance: 8e-62; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 24 - 156
Target Start/End: Complemental strand, 174259 - 174127
Alignment:
Q  24 gactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaa 123  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  174259 gactaaccttctttaatcataagtatgtaatcctgaaaaagggtttaaccttgtagttgttaataggttttgatgttgtagaattagggtttgaaactaa 174160  T
Q  124 aattgatcgtagaaagagtagataatccgatga 156  Q
    |||||||||||||||||||||||||||||||||    
T  174159 aattgatcgtagaaagagtagataatccgatga 174127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 120; Significance: 3e-61; HSPs: 20)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 25 - 156
Target Start/End: Original strand, 19565933 - 19566064
Alignment:
Q  25 actaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaaa 124  Q
    |||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  19565933 actaaccttctttaatcataagtatgtaatcctgaaaaagggtttaaccttgtagttgttaataggttttgatgttgtagaattagggtttgaaactaaa 19566032  T
Q  125 attgatcgtagaaagagtagataatccgatga 156  Q
    ||||||||||||||||||||||||||||||||    
T  19566033 attgatcgtagaaagagtagataatccgatga 19566064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 22 - 156
Target Start/End: Original strand, 33243306 - 33243440
Alignment:
Q  22 gagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaact 121  Q
    ||||||||| |||||||||||||||||||||||| ||||  ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  33243306 gagactaacattctttaatcataagtatgtaatcttgaaatagggtttaatcttgtagttgttaataggttttgatgttgtagaattagggtttgaaact 33243405  T
Q  122 aaaattgatcgtagaaagagtagataatccgatga 156  Q
    ||||||||| |||||||||||||||||||||||||    
T  33243406 aaaattgattgtagaaagagtagataatccgatga 33243440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 24 - 156
Target Start/End: Complemental strand, 12623354 - 12623222
Alignment:
Q  24 gactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaa 123  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  12623354 gactaaccttctttaatcataggtatgtaatcctgaaaaagggtttaaccttgtagttgttaataggttttgatgttgtagaattagggtttgaaactaa 12623255  T
Q  124 aattgatcgtagaaagagtagataatccgatga 156  Q
    ||||||| |||||||||||||||||| ||||||    
T  12623254 aattgattgtagaaagagtagataatgcgatga 12623222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 24 - 156
Target Start/End: Complemental strand, 40230344 - 40230212
Alignment:
Q  24 gactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaa 123  Q
    ||||||| |||||||||||||||||||||||| |||| ||||||||||  |||||||||||||||||||||||||||||||||||| |||||||||||||    
T  40230344 gactaactttctttaatcataagtatgtaatcttgaaaaagggtttaacattgtagttgttaataggttttgatgttgtagaattagggtttgaaactaa 40230245  T
Q  124 aattgatcgtagaaagagtagataatccgatga 156  Q
    |||||||||||||||||||||||||||||||||    
T  40230244 aattgatcgtagaaagagtagataatccgatga 40230212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 24 - 156
Target Start/End: Original strand, 44023617 - 44023749
Alignment:
Q  24 gactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaa 123  Q
    |||||||||||||||||||||||||||||||| |||| |||||||||| |||||| |||||| ||||||||||||||||||||||| |||||||||||||    
T  44023617 gactaaccttctttaatcataagtatgtaatcttgaaaaagggtttaaccttgtacttgttagtaggttttgatgttgtagaattagggtttgaaactaa 44023716  T
Q  124 aattgatcgtagaaagagtagataatccgatga 156  Q
    ||||||||||||||||||||||||||| |||||    
T  44023717 aattgatcgtagaaagagtagataatctgatga 44023749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 24 - 156
Target Start/End: Complemental strand, 46741237 - 46741105
Alignment:
Q  24 gactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaa 123  Q
    |||||||||||||||||||||| |||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||||||||| |||||||||||||    
T  46741237 gactaaccttctttaatcataaatatgtaatcctgaaaaagggtttaaccttgtagttgttaattggttttgatgttgtagaattagggtttgaaactaa 46741138  T
Q  124 aattgatcgtagaaagagtagataatccgatga 156  Q
    ||||||| ||||||||||| |||||||||||||    
T  46741137 aattgattgtagaaagagtggataatccgatga 46741105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 51 - 156
Target Start/End: Complemental strand, 33186913 - 33186808
Alignment:
Q  51 taatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaaaattgatcgtagaaagagtagataatc 150  Q
    |||| ||||| |||||||||| ||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  33186913 taattctgaaaaagggtttaaccttgtggttgttaataggttttgatgttgtagaattagggtttgaaactaaaattgattgtagaaagagtagataatc 33186814  T
Q  151 cgatga 156  Q
    ||||||    
T  33186813 cgatga 33186808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 62 - 156
Target Start/End: Original strand, 12424345 - 12424439
Alignment:
Q  62 aagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 156  Q
    ||||||||||  |||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||    
T  12424345 aagggtttaactttgtagttgttaataggttttgatgttgtagaattagggtttggaactaaaattgatcgtagaaagagtagataatccgatga 12424439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 213 - 309
Target Start/End: Complemental strand, 355784 - 355687
Alignment:
Q  213 aatgatgattgatttggctatgatatgtatacatgaaaagtggattaactaggcgtaaatgattaatc-tctcaaatgctaattgtgctaaatgaagt 309  Q
    |||||||||| |||| |||||||||||||||| ||||| |||||||| |||||||||||||||||||| | ||||| |||| || |||||||||||||    
T  355784 aatgatgattaattttgctatgatatgtatacttgaaatgtggattagctaggcgtaaatgattaatcgtttcaaaggctagttttgctaaatgaagt 355687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 379 - 432
Target Start/End: Complemental strand, 355547 - 355494
Alignment:
Q  379 gatgttgactagtgacgatgaaaatatatatgtataaagtgacgatattgatga 432  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  355547 gatgttgactagtgacgatgaaaatatatatgtataaagtgacgatgttgatga 355494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 24 - 156
Target Start/End: Complemental strand, 18463061 - 18462929
Alignment:
Q  24 gactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaacta- 122  Q
    |||||||||||||||||||| ||||| |||| ||||| ||||||||||| ||||||||||||||| ||||||||||| || || | |||||| ||| ||     
T  18463061 gactaaccttctttaatcatgagtatataattctgaaaaagggtttaattttgtagttgttaata-gttttgatgttataaaagttaggttttaaattac 18462963  T
Q  123 aaattgatcgtagaaagagtagataatccgatga 156  Q
    || ||||| || ||||| |||| |||||| ||||    
T  18462962 aatttgattgttgaaagtgtaggtaatccaatga 18462929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 379 - 435
Target Start/End: Original strand, 12319050 - 12319106
Alignment:
Q  379 gatgttgactagtgacgatgaaaatatatatgtataaagtgacgatattgatgatgt 435  Q
    |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  12319050 gatgttgactggtgacgatgaaaatatatatgtataaagtgacgatgttgatgatgt 12319106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 25 - 106
Target Start/End: Complemental strand, 14477668 - 14477588
Alignment:
Q  25 actaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaa 106  Q
    ||||||||||||||||||| ||||| |||| ||||| |||||||| |||||||||| ||| ||| ||||||||||| |||||    
T  14477668 actaaccttctttaatcatgagtatataattctgaaaaagggtttgatcttgtagtcgttgata-gttttgatgttatagaa 14477588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 23 - 71
Target Start/End: Original strand, 45314096 - 45314144
Alignment:
Q  23 agactaaccttctttaatcataagtatgtaatcctgaagaagggtttaa 71  Q
    |||||||||||| ||||||||||||||||||| ||||| ||||||||||    
T  45314096 agactaaccttcattaatcataagtatgtaattctgaaaaagggtttaa 45314144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 90 - 156
Target Start/End: Complemental strand, 16296844 - 16296777
Alignment:
Q  90 gttttgatgttgtagaa-ttaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 156  Q
    ||||||||||| ||||| ||| ||||||||| |||||||||| || |||||||||| |||||||||||    
T  16296844 gttttgatgttatagaaattagggtttgaaattaaaattgattgttgaaagagtaggtaatccgatga 16296777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 24 - 71
Target Start/End: Original strand, 26921523 - 26921570
Alignment:
Q  24 gactaaccttctttaatcataagtatgtaatcctgaagaagggtttaa 71  Q
    ||||||||||| ||||||||||||||||||| ||||| ||||||||||    
T  26921523 gactaaccttcattaatcataagtatgtaattctgaaaaagggtttaa 26921570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 57 - 100
Target Start/End: Complemental strand, 20150830 - 20150787
Alignment:
Q  57 tgaagaagggtttaatcttgtagttgttaataggttttgatgtt 100  Q
    |||| |||| ||||| ||||||||||||||||||||||||||||    
T  20150830 tgaaaaaggatttaaccttgtagttgttaataggttttgatgtt 20150787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 24 - 106
Target Start/End: Complemental strand, 13165170 - 13165089
Alignment:
Q  24 gactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaa 106  Q
    |||||||||||||||||||| |||||   ||  |||| ||||| ||||| || |||||||||||| ||||||||||| |||||    
T  13165170 gactaaccttctttaatcatgagtataggattgtgaaaaaggggttaattttatagttgttaata-gttttgatgttatagaa 13165089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 57 - 106
Target Start/End: Original strand, 2424435 - 2424483
Alignment:
Q  57 tgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaa 106  Q
    |||| |||||||||||||||||||||||| || ||||||||||| |||||    
T  2424435 tgaaaaagggtttaatcttgtagttgttatta-gttttgatgttatagaa 2424483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 337 - 377
Target Start/End: Complemental strand, 355602 - 355562
Alignment:
Q  337 tgatgatgatttttgatgatgagtatacatatataaagtga 377  Q
    ||||| |||||||| |||| |||||||||||||||||||||    
T  355602 tgatggtgattttttatgacgagtatacatatataaagtga 355562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0630 (Bit Score: 117; Significance: 2e-59; HSPs: 1)
Name: scaffold0630
Description:

Target: scaffold0630; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 24 - 156
Target Start/End: Complemental strand, 9101 - 8969
Alignment:
Q  24 gactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaa 123  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  9101 gactaaccttctttaatcataagtatgtaatcctgaaaaagggtttaatcttgtagttgttaataggttttgatgttgtagaattagggtttgaaactaa 9002  T
Q  124 aattgatcgtagaaagagtagataatccgatga 156  Q
    |||||||||||||||||||| ||||| ||||||    
T  9001 aattgatcgtagaaagagtatataatgcgatga 8969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 117; Significance: 2e-59; HSPs: 9)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 24 - 156
Target Start/End: Original strand, 9743093 - 9743225
Alignment:
Q  24 gactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaa 123  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| |||||||||||||||||||| |||||||||||||    
T  9743093 gactaaccttctttaatcataagtatgtaatcctgaaaaagggtttaaccttgtagttgttaataagttttgatgttgtagaattagggtttgaaactaa 9743192  T
Q  124 aattgatcgtagaaagagtagataatccgatga 156  Q
    |||||||||||||||||||||||||||||||||    
T  9743193 aattgatcgtagaaagagtagataatccgatga 9743225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 28 - 156
Target Start/End: Complemental strand, 14318106 - 14317978
Alignment:
Q  28 aaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaaaatt 127  Q
    ||||||||||||||||||||||||||||||||| |||||||||| |||| |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  14318106 aaccttctttaatcataagtatgtaatcctgaaaaagggtttaaccttgcagttgttaataggttttgatgttgtagaattagggtttgaaactaaaatt 14318007  T
Q  128 gatcgtagaaagagtagataatccgatga 156  Q
    |||||||||||||||||||||||||||||    
T  14318006 gatcgtagaaagagtagataatccgatga 14317978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 24 - 156
Target Start/End: Original strand, 15119321 - 15119453
Alignment:
Q  24 gactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaa 123  Q
    |||||||||||||||||||||||||||||||| |||| |||||||||| ||||||||||||||||| ||||||||||||||||||| |||||||||||||    
T  15119321 gactaaccttctttaatcataagtatgtaatcttgaaaaagggtttaaccttgtagttgttaatagattttgatgttgtagaattagggtttgaaactaa 15119420  T
Q  124 aattgatcgtagaaagagtagataatccgatga 156  Q
    |||||||||||||||||||||||||||||||||    
T  15119421 aattgatcgtagaaagagtagataatccgatga 15119453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 24 - 156
Target Start/End: Original strand, 14160870 - 14161002
Alignment:
Q  24 gactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaa 123  Q
    ||||||||||||||||||||||||||||||||||||| | |||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  14160870 gactaaccttctttaatcataagtatgtaatcctgaaaaggggtttaaccttgtagttgttaataggttttgatgttgtagaattagggtttgaaactaa 14160969  T
Q  124 aattgatcgtagaaagagtagataatccgatga 156  Q
    ||||||| |||||||||||||||||| ||||||    
T  14160970 aattgattgtagaaagagtagataattcgatga 14161002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 65 - 156
Target Start/End: Original strand, 43276799 - 43276890
Alignment:
Q  65 ggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 156  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| ||||||||||||    
T  43276799 ggtttaaccttgtagttgttaataggttttgatgttgtagaattagggtttgaaactaaaattgattgtagaaagagtaaataatccgatga 43276890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 62 - 153
Target Start/End: Original strand, 8513806 - 8513898
Alignment:
Q  62 aagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaaaattgatcgtag-aaagagtagataatccga 153  Q
    |||||||||| |||||||||||| ||||||||||||| |||||||||| ||||||||||||||| | || |||| ||||||||||||||||||    
T  8513806 aagggtttaaccttgtagttgtttataggttttgatgctgtagaattagggtttgaaactaaaactaattgtagaaaagagtagataatccga 8513898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 22 - 84
Target Start/End: Original strand, 42565845 - 42565907
Alignment:
Q  22 gagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgtt 84  Q
    |||||||| ||||||||||||||| ||| |||| ||||| |||||||||||||||||||||||    
T  42565845 gagactaatcttctttaatcataaatatataattctgaaaaagggtttaatcttgtagttgtt 42565907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 62 - 109
Target Start/End: Original strand, 8488147 - 8488194
Alignment:
Q  62 aagggtttaatcttgtagttgttaataggttttgatgttgtagaatta 109  Q
    |||||||||| ||| |||||||| ||||||||||||| ||||||||||    
T  8488147 aagggtttaaccttatagttgtttataggttttgatgctgtagaatta 8488194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 24 - 118
Target Start/End: Complemental strand, 33060476 - 33060383
Alignment:
Q  24 gactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaa 118  Q
    |||||||||||||||||||| ||| | |||| ||| | ||||||||||| |||| |||||| |||  |||||||||  ||||| | |||||||||    
T  33060476 gactaaccttctttaatcatgagtctataattctggaaaagggtttaattttgttgttgtttata-attttgatgtaatagaagttaggtttgaa 33060383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 117; Significance: 2e-59; HSPs: 14)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 24 - 156
Target Start/End: Original strand, 53646073 - 53646205
Alignment:
Q  24 gactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaa 123  Q
    |||||||||||||||||||||| |||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  53646073 gactaaccttctttaatcataaatatgtaatcctgaaaaagggtttaaccttgtagttgttaataggttttgatgttgtagaattagggtttgaaactaa 53646172  T
Q  124 aattgatcgtagaaagagtagataatccgatga 156  Q
    |||||||||||||||||||||||||||||||||    
T  53646173 aattgatcgtagaaagagtagataatccgatga 53646205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 24 - 156
Target Start/End: Original strand, 54330321 - 54330453
Alignment:
Q  24 gactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaa 123  Q
    ||||||| ||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  54330321 gactaactttctttaatcataagtatgtaatcctgaaaaagggtttaaccttgtagttgttaataggttttgatgttgtagaattagggtttgaaactaa 54330420  T
Q  124 aattgatcgtagaaagagtagataatccgatga 156  Q
    |||||||||||||||||||||||||||||||||    
T  54330421 aattgatcgtagaaagagtagataatccgatga 54330453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 56 - 156
Target Start/End: Original strand, 14152446 - 14152546
Alignment:
Q  56 ctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatg 155  Q
    ||||| |||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| ||| ||||||||||||||||||||    
T  14152446 ctgaaaaagggtttaaccttgtagttgttagtaggttttgatgttgtagaattagggtttgaaactaaaattgattgtataaagagtagataatccgatg 14152545  T
Q  156 a 156  Q
    |    
T  14152546 a 14152546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 57 - 156
Target Start/End: Complemental strand, 5215651 - 5215552
Alignment:
Q  57 tgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 156  Q
    |||| |||||||||| ||||||||| ||||||||||||||||||||||||||| ||||| |||||||||||||| ||||| |||||||||||||||||||    
T  5215651 tgaaaaagggtttaaccttgtagttattaataggttttgatgttgtagaattagggtttaaaactaaaattgattgtagatagagtagataatccgatga 5215552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 213 - 347
Target Start/End: Original strand, 511652 - 511789
Alignment:
Q  213 aatgatgattgatttggctatgatatgtatacatgaaaagtggattaactaggcgtaaatgattaatc-tctcaaatgctaattgtgctaaatgaagt-- 309  Q
    |||||||||| |||| ||||||||||| |||| ||||| |||||||| |||| ||||||||||||||| | ||||| |||||||||||||||||||||      
T  511652 aatgatgattaatttagctatgatatgcatacttgaaatgtggattagctagacgtaaatgattaatcgtttcaaaggctaattgtgctaaatgaagtga 511751  T
Q  310 tgctacttatttgatgtggtaaatgtttgatgatgatt 347  Q
    || ||| || ||||||  ||| |||||| |||||||||    
T  511752 tgttacctacttgatgaagtatatgttttatgatgatt 511789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 24 - 115
Target Start/End: Original strand, 21845666 - 21845756
Alignment:
Q  24 gactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggttt 115  Q
    |||||||||||||||||||||||||| || | ||||| |||||||||| |||||||||||||||| ||||||||||| ||||| | ||||||    
T  21845666 gactaaccttctttaatcataagtatatagttctgaaaaagggtttaagcttgtagttgttaata-gttttgatgttatagaaattaggttt 21845756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 24 - 106
Target Start/End: Complemental strand, 48631369 - 48631288
Alignment:
Q  24 gactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaa 106  Q
    |||||||||||||||||||||| ||| || | ||||| |||||||||| |||||||||||||||| ||||||||||| |||||    
T  48631369 gactaaccttctttaatcataaatatatagttctgaaaaagggtttaagcttgtagttgttaata-gttttgatgttatagaa 48631288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 88 - 156
Target Start/End: Complemental strand, 15566486 - 15566418
Alignment:
Q  88 aggttttgatgttgtagaattaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 156  Q
    |||||||||||| ||| ||||| ||||| |||||||||||||||||||||| ||||||||||| |||||    
T  15566486 aggttttgatgtggtaaaattagggtttaaaactaaaattgatcgtagaaatagtagataatctgatga 15566418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 379 - 432
Target Start/End: Original strand, 511880 - 511935
Alignment:
Q  379 gatgttgactagtgacgatgaaa--atatatatgtataaagtgacgatattgatga 432  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||| |||||||    
T  511880 gatgttgactagtgacgatgaaaatatatatatgtataaagtgacgatgttgatga 511935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 51 - 99
Target Start/End: Complemental strand, 15566754 - 15566706
Alignment:
Q  51 taatcctgaagaagggtttaatcttgtagttgttaataggttttgatgt 99  Q
    |||| ||||| |||||||||| |||||||||||||||||||||||||||    
T  15566754 taattctgaaaaagggtttaaccttgtagttgttaataggttttgatgt 15566706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 337 - 382
Target Start/End: Original strand, 511825 - 511870
Alignment:
Q  337 tgatgatgatttttgatgatgagtatacatatataaagtgacgatg 382  Q
    ||||| |||||||| |||| ||||||||||||||||||||||||||    
T  511825 tgatggtgattttttatgacgagtatacatatataaagtgacgatg 511870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 22 - 115
Target Start/End: Original strand, 3160639 - 3160731
Alignment:
Q  22 gagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggttt 115  Q
    |||||||||||||||||||||| ||||| |||| || || | ||||||||  ||||||||||| ||| |||||||| || ||||| | ||||||    
T  3160639 gagactaaccttctttaatcatgagtatataattctaaaaatgggtttaactttgtagttgttgata-gttttgatattatagaaattaggttt 3160731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 113 - 156
Target Start/End: Original strand, 45803440 - 45803483
Alignment:
Q  113 tttgaaactaaaattgatcgtagaaagagtagataatccgatga 156  Q
    |||||||||||||||||| || |||||||||| |||||||||||    
T  45803440 tttgaaactaaaattgattgttgaaagagtaggtaatccgatga 45803483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 255 - 295
Target Start/End: Complemental strand, 10289923 - 10289882
Alignment:
Q  255 gattaactaggcgtaaatgattaatc-tctcaaatgctaatt 295  Q
    |||||||||||||||||||||||||| ||||| |||||||||    
T  10289923 gattaactaggcgtaaatgattaatcatctcacatgctaatt 10289882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 115; Significance: 3e-58; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 22 - 156
Target Start/End: Complemental strand, 62758 - 62624
Alignment:
Q  22 gagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaact 121  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| ||||||||||||||||||||||||||||||| |||||||||||    
T  62758 gagactaaccttctttaatcataagtatgtaatcctgaaaaagggtttaaccttgtggttgttaataggttttgatgttgtagaattagggtttgaaact 62659  T
Q  122 aaaattgatcgtagaaagagtagataatccgatga 156  Q
    ||||||||| |||||||||||||||||||||||||    
T  62658 aaaattgattgtagaaagagtagataatccgatga 62624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 115; Significance: 3e-58; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 22 - 156
Target Start/End: Original strand, 7217256 - 7217389
Alignment:
Q  22 gagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaact 121  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| |||||||||||||||||| |||||||||||    
T  7217256 gagactaaccttctttaatcataagtatgtaatcctgaaaaagggtttaaccttgtagttgttaatagg-tttgatgttgtagaattagggtttgaaact 7217354  T
Q  122 aaaattgatcgtagaaagagtagataatccgatga 156  Q
    |||||||||||||||||||||||||||||||||||    
T  7217355 aaaattgatcgtagaaagagtagataatccgatga 7217389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 24 - 156
Target Start/End: Original strand, 23431461 - 23431593
Alignment:
Q  24 gactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaa 123  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| |||||||||||||||||||||||||| |||||||||||||    
T  23431461 gactaaccttctttaatcataagtatgtaatcctgaaaaagggtttaaccttgtagttgctaataggttttgatgttgtagaattagggtttgaaactaa 23431560  T
Q  124 aattgatcgtagaaagagtagataatccgatga 156  Q
    ||||||| |||||||||||||||||||||||||    
T  23431561 aattgattgtagaaagagtagataatccgatga 23431593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 24 - 156
Target Start/End: Complemental strand, 31734745 - 31734613
Alignment:
Q  24 gactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaa 123  Q
    ||||||||||||||||||||||||||||||| ||||| |||||||||| |||| |||||||||||||||||||||||||| ||||| |||||||||||||    
T  31734745 gactaaccttctttaatcataagtatgtaattctgaaaaagggtttaaccttgcagttgttaataggttttgatgttgtaaaattagggtttgaaactaa 31734646  T
Q  124 aattgatcgtagaaagagtagataatccgatga 156  Q
    |||||||||||||||||||||||||||||||||    
T  31734645 aattgatcgtagaaagagtagataatccgatga 31734613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 24 - 156
Target Start/End: Complemental strand, 32259883 - 32259751
Alignment:
Q  24 gactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaa 123  Q
    ||||||||||||||||||||||||||||||||||||| ||| |||||| ||||||||| |||||| |||||||||||||||||||| |||||||||||||    
T  32259883 gactaaccttctttaatcataagtatgtaatcctgaaaaagagtttaaccttgtagtttttaataagttttgatgttgtagaattagggtttgaaactaa 32259784  T
Q  124 aattgatcgtagaaagagtagataatccgatga 156  Q
    |||||||||||||||||||||||||||||||||    
T  32259783 aattgatcgtagaaagagtagataatccgatga 32259751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 27 - 156
Target Start/End: Complemental strand, 22557282 - 22557154
Alignment:
Q  27 taaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaaaat 126  Q
    |||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  22557282 taaccttcttta-tcataagtatgtaatcctgaaaaagggtttaaccttgtagttgttaataggttttgatgttgtagaattcgggtttgaaactaaaat 22557184  T
Q  127 tgatcgtagaaagagtagataatccgatga 156  Q
    ||||||||||||||||||||||||||||||    
T  22557183 tgatcgtagaaagagtagataatccgatga 22557154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 24 - 156
Target Start/End: Complemental strand, 25922039 - 25921907
Alignment:
Q  24 gactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaa 123  Q
    |||||||||| ||||||||||||||||||||||| || |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25922039 gactaaccttatttaatcataagtatgtaatcctaaaaaagggtttaaccttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaa 25921940  T
Q  124 aattgatcgtagaaagagtagataatccgatga 156  Q
    ||||||| |||||||||||| |||||| |||||    
T  25921939 aattgattgtagaaagagtaaataatctgatga 25921907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 27 - 156
Target Start/End: Original strand, 18455090 - 18455219
Alignment:
Q  27 taaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaaaat 126  Q
    |||||||||||||||||||||||||||||||||| |||| ||||| ||||||||||||||||||||||||| ||||||||||| |||||||||||| |||    
T  18455090 taaccttctttaatcataagtatgtaatcctgaaaaaggttttaaccttgtagttgttaataggttttgatattgtagaattagggtttgaaactagaat 18455189  T
Q  127 tgatcgtagaaagagtagataatccgatga 156  Q
    |||| |||||||||||||||||||||||||    
T  18455190 tgatagtagaaagagtagataatccgatga 18455219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 51 - 156
Target Start/End: Complemental strand, 23658099 - 23657994
Alignment:
Q  51 taatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaaaattgatcgtagaaagagtagataatc 150  Q
    |||| ||||| |||||||||| ||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| |||||||||||||||||||    
T  23658099 taattctgaaaaagggtttaaccttgtagttgttaataggttttgatgttgtagaataagggtttgaaactaaaattgattgtagaaagagtagataatc 23658000  T
Q  151 cgatga 156  Q
    ||||||    
T  23657999 cgatga 23657994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 22 - 106
Target Start/End: Complemental strand, 1818992 - 1818909
Alignment:
Q  22 gagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaa 106  Q
    |||||||||||||||||||||| ||||| || | ||||| |||||||||| |||||||||||||||| ||||||||||| |||||    
T  1818992 gagactaaccttctttaatcatgagtatatagttctgaaaaagggtttaagcttgtagttgttaata-gttttgatgttatagaa 1818909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 22 - 85
Target Start/End: Original strand, 25601342 - 25601406
Alignment:
Q  22 gagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatc-ttgtagttgtta 85  Q
    ||||||||||||| ||||||||||| ||||||| ||||| |||||||||| | ||||||||||||    
T  25601342 gagactaaccttcattaatcataagaatgtaattctgaaaaagggtttaacctttgtagttgtta 25601406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 113 - 156
Target Start/End: Complemental strand, 29045213 - 29045170
Alignment:
Q  113 tttgaaactaaaattgatcgtagaaagagtagataatccgatga 156  Q
    |||||||||||||||||| || |||||||||| |||||||||||    
T  29045213 tttgaaactaaaattgattgttgaaagagtaggtaatccgatga 29045170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 37 - 106
Target Start/End: Complemental strand, 18982439 - 18982371
Alignment:
Q  37 taatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaa 106  Q
    ||||||||||||| |  | ||||| ||||||||||| ||||||||||| ||| ||||||||| |||||||    
T  18982439 taatcataagtatatggttctgaaaaagggtttaattttgtagttgttgata-gttttgatgctgtagaa 18982371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 51 - 115
Target Start/End: Original strand, 24506157 - 24506220
Alignment:
Q  51 taatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggttt 115  Q
    |||| ||||| ||||||||||| ||||||||||| ||| ||||||||||| ||||| | ||||||    
T  24506157 taattctgaaaaagggtttaattttgtagttgttgata-gttttgatgttatagaagttaggttt 24506220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 115; Significance: 3e-58; HSPs: 14)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 22 - 156
Target Start/End: Original strand, 23968635 - 23968769
Alignment:
Q  22 gagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaact 121  Q
    ||||||||||||||||||||||||||||||||||||||| || ||||||| |||||||| |||||||||||||||||||||||||||| |||||||||||    
T  23968635 gagactaaccttctttaatcataagtatgtaatcctgaaaaaaggtttaaccttgtagtcgttaataggttttgatgttgtagaattagggtttgaaact 23968734  T
Q  122 aaaattgatcgtagaaagagtagataatccgatga 156  Q
    |||||||||||||||||||||||||||||||||||    
T  23968735 aaaattgatcgtagaaagagtagataatccgatga 23968769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 24 - 156
Target Start/End: Complemental strand, 24718057 - 24717925
Alignment:
Q  24 gactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaa 123  Q
    ||||||| ||||||||||||||||||||||||||||| | |||||||| |||||| |||| ||||||||||||||||| ||||||  |||||||||||||    
T  24718057 gactaacattctttaatcataagtatgtaatcctgaaaaggggtttaaccttgtatttgtcaataggttttgatgttgcagaattcgggtttgaaactaa 24717958  T
Q  124 aattgatcgtagaaagagtagataatccgatga 156  Q
    ||||||| |||||||||||||||||||||||||    
T  24717957 aattgattgtagaaagagtagataatccgatga 24717925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 24 - 156
Target Start/End: Original strand, 14179742 - 14179874
Alignment:
Q  24 gactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaa 123  Q
    |||||||||||||||||||| |||||||||||||||| || ||||||  ||| || |||||||||| |||||||||||| |||||| |||||||||||||    
T  14179742 gactaaccttctttaatcatgagtatgtaatcctgaaaaaaggtttatccttatacttgttaatagattttgatgttgtggaattagggtttgaaactaa 14179841  T
Q  124 aattgatcgtagaaagagtagataatccgatga 156  Q
    ||||||| ||||||||||||||||||| |||||    
T  14179842 aattgattgtagaaagagtagataatctgatga 14179874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 24 - 156
Target Start/End: Original strand, 14183480 - 14183612
Alignment:
Q  24 gactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaa 123  Q
    |||||||||||||||||||| |||||||||||||||| || | ||||  ||| || ||||||||||||||||||||||| |||||| |||||||||||||    
T  14183480 gactaaccttctttaatcatgagtatgtaatcctgaaaaaagatttatccttatacttgttaataggttttgatgttgtggaattagggtttgaaactaa 14183579  T
Q  124 aattgatcgtagaaagagtagataatccgatga 156  Q
    ||||||| |||||||| ||||||||||||||||    
T  14183580 aattgattgtagaaagggtagataatccgatga 14183612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 22 - 89
Target Start/End: Complemental strand, 19647273 - 19647206
Alignment:
Q  22 gagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaatag 89  Q
    |||||||||||||||||||||||||||| |||| ||||| ||||||||||||||||||||||||||||    
T  19647273 gagactaaccttctttaatcataagtatataattctgaaaaagggtttaatcttgtagttgttaatag 19647206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 24 - 118
Target Start/End: Original strand, 20005985 - 20006078
Alignment:
Q  24 gactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaa 118  Q
    ||||| |||||||||||||| ||| | |||| ||||| ||||||||||| |||| ||||||||||  |||||||||| ||||| | |||||||||    
T  20005985 gactagccttctttaatcatgagtctataattctgaaaaagggtttaattttgttgttgttaata-attttgatgttatagaagttaggtttgaa 20006078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 255 - 347
Target Start/End: Complemental strand, 43938779 - 43938684
Alignment:
Q  255 gattaactaggcgtaaatgattaatc-tctcaaatgctaattgtgctaaatgaagt--tgctacttatttgatgtggtaaatgtttgatgatgatt 347  Q
    |||| |||||| ||||||| |||||| ||| ||||| || || ||||||||||||   || ||||| |||||||||||||||||||||||||||||    
T  43938779 gattgactaggtgtaaatggttaatcgtctaaaatgttatttttgctaaatgaagagatgttacttctttgatgtggtaaatgtttgatgatgatt 43938684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 90 - 156
Target Start/End: Original strand, 149585 - 149652
Alignment:
Q  90 gttttgatgttgtagaa-ttaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 156  Q
    ||||||||||| ||||| ||| ||||||||| |||||||||| || |||||||||| |||||||||||    
T  149585 gttttgatgttatagaaattagggtttgaaattaaaattgattgttgaaagagtaggtaatccgatga 149652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 27 - 106
Target Start/End: Original strand, 25584280 - 25584358
Alignment:
Q  27 taaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaa 106  Q
    ||||||||||||||||| ||||| |||| ||||| |||||||||| ||||| |||| | ||| ||||||||||| |||||    
T  25584280 taaccttctttaatcatgagtatataattctgaaaaagggtttaaccttgtcgttgatgata-gttttgatgttatagaa 25584358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 24 - 106
Target Start/End: Original strand, 28652566 - 28652648
Alignment:
Q  24 gactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatc-ttgtagttgttaataggttttgatgttgtagaa 106  Q
    ||||||||||| ||||||||||||||||||| ||||| |||||||||  | |||||||||||  || ||||||||||| |||||    
T  28652566 gactaaccttcattaatcataagtatgtaattctgaaaaagggtttagcctttgtagttgttgtta-gttttgatgttatagaa 28652648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 379 - 420
Target Start/End: Original strand, 27609193 - 27609234
Alignment:
Q  379 gatgttgactagtgacgatgaaaatatatatgtataaagtga 420  Q
    |||||||||||||||| |||||||||||| ||||||||||||    
T  27609193 gatgttgactagtgacaatgaaaatatatttgtataaagtga 27609234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 84
Target Start/End: Complemental strand, 45535963 - 45535903
Alignment:
Q  24 gactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgtt 84  Q
    |||||||||||||||||||  ||| | |||| ||||| |||||||||||||||| ||||||    
T  45535963 gactaaccttctttaatcacgagtctataattctgaaaaagggtttaatcttgttgttgtt 45535903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 113 - 156
Target Start/End: Original strand, 12626535 - 12626578
Alignment:
Q  113 tttgaaactaaaattgatcgtagaaagagtagataatccgatga 156  Q
    |||||||||||||||||| || |||||||||| |||||||||||    
T  12626535 tttgaaactaaaattgattgttgaaagagtaggtaatccgatga 12626578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 350 - 382
Target Start/End: Original strand, 27609151 - 27609183
Alignment:
Q  350 tgatgatgagtatacatatataaagtgacgatg 382  Q
    ||||||||||||||||| |||||||||||||||    
T  27609151 tgatgatgagtatacatttataaagtgacgatg 27609183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 114; Significance: 1e-57; HSPs: 19)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 27 - 156
Target Start/End: Complemental strand, 18121638 - 18121509
Alignment:
Q  27 taaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaaaat 126  Q
    |||||||||||||||||||||||||||||||||| |||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18121638 taaccttctttaatcataagtatgtaatcctgaaaaaggatttaaccttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaaaat 18121539  T
Q  127 tgatcgtagaaagagtagataatccgatga 156  Q
    |||||||| |||||||||||||||||||||    
T  18121538 tgatcgtaaaaagagtagataatccgatga 18121509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 24 - 156
Target Start/End: Original strand, 14792577 - 14792709
Alignment:
Q  24 gactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaa 123  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  14792577 gactaaccttctttaatcataagtatgtaatcctgaaaaagggtttaaccttgtagttgttaataggtttcgatgttgtagaattagggtttgaaactaa 14792676  T
Q  124 aattgatcgtagaaagagtagataatccgatga 156  Q
    ||||||||||||||||||||||||||| |||||    
T  14792677 aattgatcgtagaaagagtagataatctgatga 14792709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 25 - 148
Target Start/End: Original strand, 38887102 - 38887225
Alignment:
Q  25 actaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaaa 124  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  38887102 actaaccttctttaatcataagtatgtaatcctgaaaaagggtttaatcttgtagttgttaataggttttgatgttgtagaattagggtttgaaactaaa 38887201  T
Q  125 attgatcgtagaaagagtagataa 148  Q
    | ||||||||||||||||||||||    
T  38887202 agtgatcgtagaaagagtagataa 38887225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 24 - 156
Target Start/End: Complemental strand, 44892487 - 44892355
Alignment:
Q  24 gactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaa 123  Q
    |||||||||||||||||||||||||||||||| |||| |||| ||||| ||||||||||||||||||||||||| ||||||||||| |||||||||||||    
T  44892487 gactaaccttctttaatcataagtatgtaatcttgaaaaaggatttaaccttgtagttgttaataggttttgatattgtagaattagggtttgaaactaa 44892388  T
Q  124 aattgatcgtagaaagagtagataatccgatga 156  Q
    ||||||| |||||||||||||||||||||||||    
T  44892387 aattgattgtagaaagagtagataatccgatga 44892355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 24 - 156
Target Start/End: Original strand, 41225468 - 41225600
Alignment:
Q  24 gactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaa 123  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||| |||| ||||| |||||||||||||||||||||| ||| |||||||||||||    
T  41225468 gactaaccttctttaatcataagtatgtaatcctgaaaaagggtttaaccttgcagttgataataggttttgatgttgtagagttagggtttgaaactaa 41225567  T
Q  124 aattgatcgtagaaagagtagataatccgatga 156  Q
    ||||||  |||||||||||||||||||||||||    
T  41225568 aattgaatgtagaaagagtagataatccgatga 41225600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 24 - 156
Target Start/End: Original strand, 41226721 - 41226853
Alignment:
Q  24 gactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaa 123  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||| |||| ||||| |||||||||||||||||||||| ||| |||||||||||||    
T  41226721 gactaaccttctttaatcataagtatgtaatcctgaaaaagggtttaaccttgcagttgataataggttttgatgttgtagagttagggtttgaaactaa 41226820  T
Q  124 aattgatcgtagaaagagtagataatccgatga 156  Q
    ||||||  |||||||||||||||||||||||||    
T  41226821 aattgaatgtagaaagagtagataatccgatga 41226853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 22 - 90
Target Start/End: Original strand, 21243770 - 21243838
Alignment:
Q  22 gagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaatagg 90  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||| ||||||||||||||||||    
T  21243770 gagactaaccttctttaatcataaatatgtaatcctgaaaaagggtttaaccttgtagttgttaatagg 21243838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 24 - 108
Target Start/End: Complemental strand, 39061358 - 39061275
Alignment:
Q  24 gactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaatt 108  Q
    |||||||||||| ||||||| ||||| |||| ||||| || ||||||| |||||||||||| ||| ||||||||||| |||||||    
T  39061358 gactaaccttctgtaatcatgagtatataattctgaaaaaaggtttaaccttgtagttgttgata-gttttgatgttatagaatt 39061275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 114 - 156
Target Start/End: Original strand, 21243841 - 21243883
Alignment:
Q  114 ttgaaactaaaattgatcgtagaaagagtagataatccgatga 156  Q
    ||||||||||||||||| |||||||||||||||||||||||||    
T  21243841 ttgaaactaaaattgattgtagaaagagtagataatccgatga 21243883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 90 - 156
Target Start/End: Complemental strand, 8306577 - 8306510
Alignment:
Q  90 gttttgatgttgtagaa-ttaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 156  Q
    ||||||||||| ||||| ||| ||||||||| |||||||||| || |||||||||| |||||||||||    
T  8306577 gttttgatgttatagaaattagggtttgaaattaaaattgattgttgaaagagtaggtaatccgatga 8306510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 113 - 156
Target Start/End: Original strand, 17901905 - 17901948
Alignment:
Q  113 tttgaaactaaaattgatcgtagaaagagtagataatccgatga 156  Q
    |||||||||||||||||| || ||||||||||||||||||||||    
T  17901905 tttgaaactaaaattgattgttgaaagagtagataatccgatga 17901948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 57 - 100
Target Start/End: Complemental strand, 40390155 - 40390112
Alignment:
Q  57 tgaagaagggtttaatcttgtagttgttaataggttttgatgtt 100  Q
    |||| |||||||||| ||||||||||||||||||||||||||||    
T  40390155 tgaaaaagggtttaaccttgtagttgttaataggttttgatgtt 40390112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 22 - 120
Target Start/End: Original strand, 11808203 - 11808288
Alignment:
Q  22 gagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaac 120  Q
    |||||||||||||||||||||||||||||||||             |||| ||||||||||||||||||||||||||||  ||||||| | ||||||||    
T  11808203 gagactaaccttctttaatcataagtatgtaat-------------ttaaccttgtagttgttaataggttttgatgtttcagaattaggatttgaaac 11808288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 113 - 157
Target Start/End: Complemental strand, 6834118 - 6834074
Alignment:
Q  113 tttgaaactaaaattgatcgtagaaagagtagataatccgatgat 157  Q
    |||||||||||||||||| || |||||||||| ||||||||||||    
T  6834118 tttgaaactaaaattgattgttgaaagagtaggtaatccgatgat 6834074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 115
Target Start/End: Original strand, 21188048 - 21188138
Alignment:
Q  24 gactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggttt 115  Q
    |||||||||| ||||||||| ||||| ||||  |||  |||| |||||| ||||||||||| ||| ||||||||||| ||||| | ||||||    
T  21188048 gactaaccttttttaatcatgagtatataattttgagaaaggatttaattttgtagttgttgata-gttttgatgttatagaagttaggttt 21188138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 113 - 156
Target Start/End: Original strand, 21239146 - 21239189
Alignment:
Q  113 tttgaaactaaaattgatcgtagaaagagtagataatccgatga 156  Q
    |||||||||||||||||| || |||||||||| |||||||||||    
T  21239146 tttgaaactaaaattgattgttgaaagagtaggtaatccgatga 21239189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 233 - 309
Target Start/End: Complemental strand, 16025420 - 16025342
Alignment:
Q  233 tgatatgtatacatgaaaagtggattaactaggcgtaaatgattaatc-tctc-aaatgctaattgtgctaaatgaagt 309  Q
    ||||||||| || ||||| ||||||||  |||| |||||||||||||| |||| |||||||||||||  ||||||||||    
T  16025420 tgatatgtaaacttgaaatgtggattagttaggtgtaaatgattaatcatctcaaaatgctaattgtattaaatgaagt 16025342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 51 - 114
Target Start/End: Complemental strand, 12710877 - 12710814
Alignment:
Q  51 taatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtag-aattaaggtt 114  Q
    |||| ||||| |||||||||||||||||||||||  || ||||||||||| ||| ||||||||||    
T  12710877 taattctgaaaaagggtttaatcttgtagttgttgtta-gttttgatgttatagaaattaaggtt 12710814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 51 - 114
Target Start/End: Original strand, 24719552 - 24719615
Alignment:
Q  51 taatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtag-aattaaggtt 114  Q
    |||| ||||| |||||||||| ||||||||||||| || ||||||||||| ||| ||||||||||    
T  24719552 taattctgaaaaagggtttaaccttgtagttgttatta-gttttgatgttatagaaattaaggtt 24719615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0401 (Bit Score: 113; Significance: 5e-57; HSPs: 1)
Name: scaffold0401
Description:

Target: scaffold0401; HSP #1
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 24 - 156
Target Start/End: Complemental strand, 8859 - 8727
Alignment:
Q  24 gactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaa 123  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| ||||||| ||||||||||||||||||||| |||||||||||||    
T  8859 gactaaccttctttaatcataagtatgtaatcctgaaaaagggtttaaccttgtagatgttaatcggttttgatgttgtagaattagggtttgaaactaa 8760  T
Q  124 aattgatcgtagaaagagtagataatccgatga 156  Q
    |||||||||||||||||||||||||||||||||    
T  8759 aattgatcgtagaaagagtagataatccgatga 8727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 113; Significance: 5e-57; HSPs: 9)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 24 - 156
Target Start/End: Original strand, 8503902 - 8504034
Alignment:
Q  24 gactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaa 123  Q
    ||||||||||||| ||||||||||||||||||||||| ||| |||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  8503902 gactaaccttcttcaatcataagtatgtaatcctgaacaagagtttaaccttgtagttgttaataggttttgatgttgtagaattagggtttgaaactaa 8504001  T
Q  124 aattgatcgtagaaagagtagataatccgatga 156  Q
    |||||||||||||||||||||||||||||||||    
T  8504002 aattgatcgtagaaagagtagataatccgatga 8504034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 24 - 156
Target Start/End: Original strand, 8833220 - 8833352
Alignment:
Q  24 gactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaa 123  Q
    |||| |||||||||||||||||||||||||||||||| |||||||||| ||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  8833220 gactgaccttctttaatcataagtatgtaatcctgaaaaagggtttaaccttatagttgttaataggttttgatgttgtagaattagggtttgaaactaa 8833319  T
Q  124 aattgatcgtagaaagagtagataatccgatga 156  Q
    ||||||||||||||||||||||||||| |||||    
T  8833320 aattgatcgtagaaagagtagataatctgatga 8833352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 24 - 156
Target Start/End: Original strand, 14025821 - 14025953
Alignment:
Q  24 gactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaa 123  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| ||||||||||||| ||||| ||||||||||||     
T  14025821 gactaaccttctttaatcataagtatgtaatcctgaaaaagggtttaaccttgtagttgttaatagattttgatgttgtataattagggtttgaaactac 14025920  T
Q  124 aattgatcgtagaaagagtagataatccgatga 156  Q
    |||||||||||||||||||||||||||||||||    
T  14025921 aattgatcgtagaaagagtagataatccgatga 14025953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 24 - 156
Target Start/End: Complemental strand, 26762440 - 26762308
Alignment:
Q  24 gactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaa 123  Q
    |||||||||||||||||||||| |||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  26762440 gactaaccttctttaatcataattatgtaatcctgaaaaagggtttaaccttgtagttgttaataggttttgatgttgtagaattagggtttgaaactaa 26762341  T
Q  124 aattgatcgtagaaagagtagataatccgatga 156  Q
    |||||||||||||||||||| ||||| ||||||    
T  26762340 aattgatcgtagaaagagtaaataattcgatga 26762308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 22 - 156
Target Start/End: Complemental strand, 26750071 - 26749938
Alignment:
Q  22 gagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaact 121  Q
    |||||||||||| ||||||||||||||| |||||||||| | |||||||| |||||||||||||||| ||||||||||||||||||| ||| || |||||    
T  26750071 gagactaaccttttttaatcataagtatataatcctgaaaaggggtttaaccttgtagttgttaataagttttgatgttgtagaatt-agggttaaaact 26749973  T
Q  122 aaaattgatcgtagaaagagtagataatccgatga 156  Q
    |||||||||| ||||||||||||||||||||||||    
T  26749972 aaaattgatcatagaaagagtagataatccgatga 26749938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 24 - 109
Target Start/End: Original strand, 1626932 - 1627017
Alignment:
Q  24 gactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaatta 109  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||| |||||    
T  1626932 gactaaccttctttaatcataagtatgtaatcctgaaaaagggtttaaccttgtagttgttaataggttttgatgttgtaaaatta 1627017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 24 - 106
Target Start/End: Complemental strand, 21504177 - 21504096
Alignment:
Q  24 gactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaa 106  Q
    |||||||||||||||||||||||||| |  | ||||| ||||||||||  |||||||||||| || ||||||||||| |||||    
T  21504177 gactaaccttctttaatcataagtatatggttctgaaaaagggtttaagtttgtagttgttagta-gttttgatgttatagaa 21504096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 255 - 346
Target Start/End: Original strand, 23374572 - 23374666
Alignment:
Q  255 gattaactaggcgtaaatgattaatc-tctcaaatgctaattgtgctaaatga--agttgctacttatttgatgtggtaaatgtttgatgatgat 346  Q
    ||||||||||| |||||||||||||| ||| |||||||| || ||||||||||  |  || |  || ||||||||||||||||||||||||||||    
T  23374572 gattaactaggtgtaaatgattaatcgtctaaaatgctatttttgctaaatgaacatatgttgattctttgatgtggtaaatgtttgatgatgat 23374666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 57 - 100
Target Start/End: Complemental strand, 24068234 - 24068191
Alignment:
Q  57 tgaagaagggtttaatcttgtagttgttaataggttttgatgtt 100  Q
    |||| |||||||||| ||||||||||||||||||||||||||||    
T  24068234 tgaaaaagggtttaaccttgtagttgttaataggttttgatgtt 24068191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439 (Bit Score: 109; Significance: 1e-54; HSPs: 1)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 24 - 156
Target Start/End: Complemental strand, 4459 - 4327
Alignment:
Q  24 gactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaa 123  Q
    |||||||||||||||||||||||||| |||||| ||| || ||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  4459 gactaaccttctttaatcataagtatataatcccgaaaaaaggtttaaccttgtagttgttaataggttttgatgttgtagaattagggtttgaaactaa 4360  T
Q  124 aattgatcgtagaaagagtagataatccgatga 156  Q
    |||||||||||||||||||||||||||||||||    
T  4359 aattgatcgtagaaagagtagataatccgatga 4327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371 (Bit Score: 109; Significance: 1e-54; HSPs: 2)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 24 - 156
Target Start/End: Original strand, 10460 - 10592
Alignment:
Q  24 gactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaa 123  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||||||||||||||||||||||||||||| |||||||||||||    
T  10460 gactaaccttctttaatcataagtatgtaatcctgaaaaagggtttaacattgtagttgttaataggttttgatgttgtagaattagggtttgaaactaa 10559  T
Q  124 aattgatcgtagaaagagtagataatccgatga 156  Q
    ||||||| |||||||||||||||||| ||||||    
T  10560 aattgattgtagaaagagtagataatacgatga 10592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 28 - 84
Target Start/End: Complemental strand, 3908 - 3853
Alignment:
Q  28 aaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgtt 84  Q
    |||||||||||| |||||||||||||||||||| |||| ||||| | ||||||||||    
T  3908 aaccttctttaaacataagtatgtaatcctgaaaaaggatttaa-catgtagttgtt 3853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 109; Significance: 1e-54; HSPs: 12)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 24 - 156
Target Start/End: Original strand, 21579220 - 21579352
Alignment:
Q  24 gactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaa 123  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| |||||||||||||||||||| |||| ||||||||    
T  21579220 gactaaccttctttaatcataagtatgtaatcctgaaaaagggtttaaccttgtagttgttaatatgttttgatgttgtagaattagggttcgaaactaa 21579319  T
Q  124 aattgatcgtagaaagagtagataatccgatga 156  Q
    ||||||| |||||||||||||||||||||||||    
T  21579320 aattgattgtagaaagagtagataatccgatga 21579352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 24 - 156
Target Start/End: Complemental strand, 22474794 - 22474662
Alignment:
Q  24 gactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaa 123  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  22474794 gactaaccttctttaatcataagtatgtaatcctgaaaaagggtttaaccttgtagttgttaataggttttgatgttgtagaattagggtttgaaactaa 22474695  T
Q  124 aattgatcgtagaaagagtagataatccgatga 156  Q
    ||||||| || |||||||||||||||| |||||    
T  22474694 aattgattgtcgaaagagtagataatctgatga 22474662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 24 - 156
Target Start/End: Original strand, 12037178 - 12037310
Alignment:
Q  24 gactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaa 123  Q
    |||||||||| |||||||||||||||||||||||||| |||||||||| ||||||||||||||||| ||||||||||||||||| | |||||||||||||    
T  12037178 gactaaccttgtttaatcataagtatgtaatcctgaaaaagggtttaaccttgtagttgttaatagcttttgatgttgtagaatcagggtttgaaactaa 12037277  T
Q  124 aattgatcgtagaaagagtagataatccgatga 156  Q
    ||||||| |||||||||||||||||||||||||    
T  12037278 aattgattgtagaaagagtagataatccgatga 12037310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 24 - 156
Target Start/End: Original strand, 41680147 - 41680279
Alignment:
Q  24 gactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaa 123  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  41680147 gactaaccttctttaatcataagtatgtaatcctgataaagggtttaaccttgtagttgttaataggttttgatgttgtagaattagggtttgaaactaa 41680246  T
Q  124 aattgatcgtagaaagagtagataatccgatga 156  Q
    ||||||  |||||| ||||||||||||||||||    
T  41680247 aattgactgtagaaggagtagataatccgatga 41680279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 25 - 156
Target Start/End: Original strand, 29762883 - 29763014
Alignment:
Q  25 actaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaaa 124  Q
    |||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| ||||||||||||||||||||  |||||||||||||    
T  29762883 actaaccttctttaatcataagtatgtaatcctgaaaaagggtttaaccttgtagttgttaataagttttgatgttgtagaattagagtttgaaactaaa 29762982  T
Q  125 attgatcgtagaaagagtagataatccgatga 156  Q
    |||||| |||||||||||||||||| ||||||    
T  29762983 attgattgtagaaagagtagataatgcgatga 29763014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 24 - 156
Target Start/End: Original strand, 17978430 - 17978562
Alignment:
Q  24 gactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaa 123  Q
    |||||| ||||| |||||||||||||||||||||||| |||| ||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  17978430 gactaaacttctataatcataagtatgtaatcctgaaaaaggatttaaccttgtagttgttaataggttttgatgttgtagaattagggtttgaaactaa 17978529  T
Q  124 aattgatcgtagaaagagtagataatccgatga 156  Q
    |||||||  ||||||||| ||||||||||||||    
T  17978530 aattgattatagaaagagcagataatccgatga 17978562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 51 - 156
Target Start/End: Complemental strand, 22208279 - 22208174
Alignment:
Q  51 taatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaaaattgatcgtagaaagagtagataatc 150  Q
    |||| ||||| |||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  22208279 taattctgaaaaagggtttaaccttgtagttgttaataggttttgatgttgtagaattagggtttgaaactaaaattgatcgtagaaagagtagataatc 22208180  T
Q  151 cgatga 156  Q
    ||||||    
T  22208179 cgatga 22208174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 24 - 135
Target Start/End: Original strand, 36405146 - 36405257
Alignment:
Q  24 gactaaccttctttaatcataagtatgtaat-cctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaacta 122  Q
    ||||||| ||||||||||||||||||||||| |||||| |||||||||| ||||||||||||||||||||||||||| ||||||||| ||||||||||||    
T  36405146 gactaactttctttaatcataagtatgtaatccctgaa-aagggtttaaccttgtagttgttaataggttttgatgtcgtagaattatggtttgaaacta 36405244  T
Q  123 aaattgatcgtag 135  Q
    |||||||| ||||    
T  36405245 aaattgattgtag 36405257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 62 - 156
Target Start/End: Original strand, 22258359 - 22258453
Alignment:
Q  62 aagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 156  Q
    |||||||||| |||| ||||||| |||||||||||||||||||||||| | ||||||||||||| |||| |||||||||||||||||||||||||    
T  22258359 aagggtttaaccttgcagttgttgataggttttgatgttgtagaattaggttttgaaactaaaactgattgtagaaagagtagataatccgatga 22258453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 100
Target Start/End: Complemental strand, 20879510 - 20879435
Alignment:
Q  24 gactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgtt 100  Q
    |||||||||||||||||||||||||| |  | || || |||||||||| ||||||||| ||||| ||||||||||||    
T  20879510 gactaaccttctttaatcataagtatatggttctaaaaaagggtttaagcttgtagttattaat-ggttttgatgtt 20879435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 57 - 100
Target Start/End: Complemental strand, 22966815 - 22966772
Alignment:
Q  57 tgaagaagggtttaatcttgtagttgttaataggttttgatgtt 100  Q
    |||| |||||||||| ||||||||||||||||||||||||||||    
T  22966815 tgaaaaagggtttaaccttgtagttgttaataggttttgatgtt 22966772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 62 - 100
Target Start/End: Original strand, 21697512 - 21697550
Alignment:
Q  62 aagggtttaatcttgtagttgttaataggttttgatgtt 100  Q
    ||||||||||  |||||||||||||||||||||||||||    
T  21697512 aagggtttaacattgtagttgttaataggttttgatgtt 21697550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0385 (Bit Score: 107; Significance: 2e-53; HSPs: 1)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 22 - 156
Target Start/End: Complemental strand, 385 - 251
Alignment:
Q  22 gagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaact 121  Q
    |||| ||| |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||    
T  385 gagattaatcttctttaatcataagtatgtaatcctgaaaaagggtttaaccttgtagttgttaataggttttgatgttgtagaattagggtttgaaact 286  T
Q  122 aaaattgatcgtagaaagagtagataatccgatga 156  Q
    |||||| || |||||||||||||||||||||||||    
T  285 aaaatttatagtagaaagagtagataatccgatga 251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 105; Significance: 3e-52; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 24 - 156
Target Start/End: Original strand, 9942 - 10074
Alignment:
Q  24 gactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaa 123  Q
    ||||||||||||||||||||||||||||||| ||||| |||||||||  |||||||||  |||||||||||||||||||||||||| |||||||||||||    
T  9942 gactaaccttctttaatcataagtatgtaattctgaaaaagggtttagccttgtagtttctaataggttttgatgttgtagaattagggtttgaaactaa 10041  T
Q  124 aattgatcgtagaaagagtagataatccgatga 156  Q
    |||||||||||||||||||||||||||||||||    
T  10042 aattgatcgtagaaagagtagataatccgatga 10074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 101; Significance: 7e-50; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 24 - 156
Target Start/End: Complemental strand, 33492 - 33360
Alignment:
Q  24 gactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaa 123  Q
    |||||||||||||||||||||||||| |||||||||| |||||||||| | ||||||||||||||||||||||||||||||||||| |||||||||||||    
T  33492 gactaaccttctttaatcataagtatttaatcctgaaaaagggtttaaacgtgtagttgttaataggttttgatgttgtagaattagggtttgaaactaa 33393  T
Q  124 aattgatcgtagaaagagtagataatccgatga 156  Q
    ||||||| || |||| |||||||||||||||||    
T  33392 aattgattgttgaaatagtagataatccgatga 33360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 95; Significance: 3e-46; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 24 - 156
Target Start/End: Complemental strand, 57011 - 56882
Alignment:
Q  24 gactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaa 123  Q
    ||||||||||||||||||||||||||||||||||||| ||||   ||| ||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  57011 gactaaccttctttaatcataagtatgtaatcctgaaaaagg---taaccttgtagatgttaataggttttgatgttgtagaattagggtttgaaactaa 56915  T
Q  124 aattgatcgtagaaagagtagataatccgatga 156  Q
    ||||||| |||||||||||||||||| ||||||    
T  56914 aattgattgtagaaagagtagataattcgatga 56882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0431 (Bit Score: 79; Significance: 9e-37; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 62 - 156
Target Start/End: Complemental strand, 5630 - 5536
Alignment:
Q  62 aagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 156  Q
    ||||||||||  |||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||    
T  5630 aagggtttaactttgtagttgttaataggttttgatgttgtagaattagggtttggaactaaaattgatcgtagaaagagtagataatccgatga 5536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1437 (Bit Score: 76; Significance: 6e-35; HSPs: 1)
Name: scaffold1437
Description:

Target: scaffold1437; HSP #1
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 37 - 156
Target Start/End: Original strand, 321 - 440
Alignment:
Q  37 taatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaaaattgatcgtaga 136  Q
    ||||||||||||||| ||||  || ||||||||||  |||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| || |    
T  321 taatcataagtatgtcatccaaaaaaagggtttaacattgtagttgttaataggttttgatgttgtaaaattaaggttggaaactaaaattgatcataaa 420  T
Q  137 aagagtagataatccgatga 156  Q
    |||| |||||||||||||||    
T  421 aagattagataatccgatga 440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1160 (Bit Score: 74; Significance: 9e-34; HSPs: 1)
Name: scaffold1160
Description:

Target: scaffold1160; HSP #1
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 63 - 156
Target Start/End: Complemental strand, 683 - 590
Alignment:
Q  63 agggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 156  Q
    |||||||||  |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||||||||||    
T  683 agggtttaacattgtagttgttaataggttttgatgttgtagaattagggtttgaaactaaaattgatcatagaaagagtatataatccgatga 590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 73; Significance: 3e-33; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 49 - 156
Target Start/End: Complemental strand, 6430 - 6322
Alignment:
Q  49 tgtaatcctgaagaagggtttaatcttgtagttgttaataggttttga-tgttgtagaattaaggtttgaaactaaaattgatcgtagaaagagtagata 147  Q
    |||||| ||||| ||||| ||||||||||||||||| ||||||||| | ||||||||||||| |||||||||||||||||||| ||||||||||||||||    
T  6430 tgtaattctgaaaaagggattaatcttgtagttgtttataggtttttaatgttgtagaattagggtttgaaactaaaattgattgtagaaagagtagata 6331  T
Q  148 atccgatga 156  Q
    |||||||||    
T  6330 atccgatga 6322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 71; Significance: 5e-32; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 62 - 156
Target Start/End: Complemental strand, 20199 - 20105
Alignment:
Q  62 aagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 156  Q
    |||||||||| |||||||||||||||||||||||||||| |||||||| ||||||||| |||||||||| ||||||||| |||||||||||||||    
T  20199 aagggtttaaccttgtagttgttaataggttttgatgttttagaattagggtttgaaattaaaattgattgtagaaagaatagataatccgatga 20105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 59; Significance: 8e-25; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 94 - 156
Target Start/End: Complemental strand, 169408 - 169346
Alignment:
Q  94 tgatgttgtagaattaaggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 156  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  169408 tgatgttgtagaattagggtttgaaactaaaattgatcgtagaaagagtagataatccgatga 169346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 54; Significance: 7e-22; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 24 - 156
Target Start/End: Original strand, 38456 - 38588
Alignment:
Q  24 gactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaacta- 122  Q
    |||||||||||||||||||| ||||| |||| ||||| ||||||||||| ||||||||||||||| ||||||||||| ||||| | |||||| ||| ||     
T  38456 gactaaccttctttaatcatgagtatataattctgaaaaagggtttaattttgtagttgttaata-gttttgatgttatagaagttaggttttaaattac 38554  T
Q  123 aaattgatcgtagaaagagtagataatccgatga 156  Q
    || ||||| || ||||| |||| |||||| ||||    
T  38555 aatttgattgttgaaagtgtaggtaatccaatga 38588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 24 - 89
Target Start/End: Complemental strand, 28751 - 28686
Alignment:
Q  24 gactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaatag 89  Q
    |||||||||||||||||||||||||| |||| ||||| ||| ||||||||||||||||||||||||    
T  28751 gactaaccttctttaatcataagtatataattctgaaaaagcgtttaatcttgtagttgttaatag 28686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 213 - 309
Target Start/End: Complemental strand, 30532 - 30436
Alignment:
Q  213 aatgatgattgatttggctatgatatgtatacatgaaaagtggattaactaggcgtaaatgattaatc-tctcaaatgctaattgtgctaaatgaagt 309  Q
    ||||||| || ||||||||| ||||||||||| | ||| ||||||||||||||||||||||||||||| | |||||||||||||||  ||||||||||    
T  30532 aatgatggttaatttggctacgatatgtatactt-aaatgtggattaactaggcgtaaatgattaatcgtttcaaatgctaattgtaataaatgaagt 30436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 22 - 115
Target Start/End: Complemental strand, 31969 - 31877
Alignment:
Q  22 gagactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggttt 115  Q
    |||||||||| ||||||||||| ||||| | || ||||| ||||||||||| || |||||||||||| ||||||||||||||||| | ||||||    
T  31969 gagactaaccatctttaatcatgagtatatgattctgaaaaagggtttaattttatagttgttaata-gttttgatgttgtagaagttaggttt 31877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 24 - 115
Target Start/End: Complemental strand, 3242 - 3152
Alignment:
Q  24 gactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggttt 115  Q
    |||||||||||||||||||| ||||| ||||  |||| ||||||||||| ||||||||||| ||| ||||||||||| ||||| | ||||||    
T  3242 gactaaccttctttaatcatgagtatataattatgaaaaagggtttaattttgtagttgttgata-gttttgatgttatagaagttaggttt 3152  T

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Target: scaffold0017 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 24 - 115
Target Start/End: Complemental strand, 23651 - 23561
Alignment:
Q  24 gactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggttt 115  Q
    |||| ||||||||||||||| ||||| |||| || || ||||||||||| ||||||||||||||| ||||||||||| ||||| | ||||||    
T  23651 gactgaccttctttaatcatgagtatataattctaaaaaagggtttaattttgtagttgttaata-gttttgatgttatagaagttaggttt 23561  T

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Target: scaffold1939 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold1939
Description:

Target: scaffold1939; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 24 - 151
Target Start/End: Complemental strand, 165 - 38
Alignment:
Q  24 gactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaaact-a 122  Q
    |||||||||||||||||||| ||||| |  | ||||| |||||||| |  ||||||||||||||| ||||||||||| ||||| | ||| || ||| | |    
T  165 gactaaccttctttaatcattagtatatggttctgaaaaagggttttaatttgtagttgttaata-gttttgatgttatagaagttagggttaaaattga 67  T
Q  123 aaattgatcgtagaaagagtagataatcc 151  Q
    |||||||| || |||||||||| ||||||    
T  66 aaattgattgttgaaagagtaggtaatcc 38  T

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Target: scaffold0058 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 26 - 115
Target Start/End: Original strand, 59672 - 59760
Alignment:
Q  26 ctaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggttt 115  Q
    |||||||||||||||||| ||||| |||| ||||| ||||||||||  ||||||||||| ||| |||||||| || ||||| | ||||||    
T  59672 ctaaccttctttaatcatgagtatataattctgaaaaagggtttaactttgtagttgttgata-gttttgatattatagaaattaggttt 59760  T

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Target: scaffold1102 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold1102
Description:

Target: scaffold1102; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 88
Target Start/End: Original strand, 1965 - 2029
Alignment:
Q  24 gactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaata 88  Q
    |||||||||||||||||||| ||| | |||| ||||| ||||||||||| |||| ||||||||||    
T  1965 gactaaccttctttaatcatgagtctataattctgaaaaagggtttaattttgttgttgttaata 2029  T

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Target: scaffold0394 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0394
Description:

Target: scaffold0394; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 24 - 115
Target Start/End: Original strand, 7528 - 7618
Alignment:
Q  24 gactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggttt 115  Q
    ||||||||||||||||| || ||||| | || ||||| ||||||||||| || |||||||| ||| ||||||||||| ||||| | ||||||    
T  7528 gactaaccttctttaattatgagtatatgattctgaaaaagggtttaattttatagttgttgata-gttttgatgttatagaagttaggttt 7618  T

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Target: scaffold0145 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0145
Description:

Target: scaffold0145; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 57 - 100
Target Start/End: Complemental strand, 8129 - 8086
Alignment:
Q  57 tgaagaagggtttaatcttgtagttgttaataggttttgatgtt 100  Q
    |||| |||||||||| ||||||||||||||||||||||||||||    
T  8129 tgaaaaagggtttaaccttgtagttgttaataggttttgatgtt 8086  T

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Target: scaffold0120 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 57 - 100
Target Start/End: Complemental strand, 29316 - 29273
Alignment:
Q  57 tgaagaagggtttaatcttgtagttgttaataggttttgatgtt 100  Q
    |||| |||||||||| ||||||||||||||||||||||||||||    
T  29316 tgaaaaagggtttaaccttgtagttgttaataggttttgatgtt 29273  T

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Target: scaffold0016 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 255 - 346
Target Start/End: Complemental strand, 17893 - 17799
Alignment:
Q  255 gattaactaggcgtaaatgattaatc-tctcaaatgctaattgtgctaaatga--agttgctacttatttgatgtggtaaatgtttgatgatgat 346  Q
    ||||||||||| |||||||||||||| ||| |||||||| || ||||||||||  |  || |  || ||||||||||||||||||||||||||||    
T  17893 gattaactaggtgtaaatgattaatcgtctaaaatgctatttttgctaaatgaacatatgttgattctttgatgtggtaaatgtttgatgatgat 17799  T

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Target: scaffold0300 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0300
Description:

Target: scaffold0300; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 233 - 309
Target Start/End: Original strand, 14015 - 14092
Alignment:
Q  233 tgatatgtatacatgaaaagtggattaactaggcgtaaatgattaatc-tctcaaatgctaattgtgctaaatgaagt 309  Q
    ||||||| | || ||||| ||||||||||||||| ||||||||||||| |||  |||||||||| || ||||||||||    
T  14015 tgatatgcaaacctgaaatgtggattaactaggcataaatgattaatcgtctttaatgctaattttgttaaatgaagt 14092  T

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Target: scaffold0594 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0594
Description:

Target: scaffold0594; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 113 - 156
Target Start/End: Complemental strand, 2189 - 2146
Alignment:
Q  113 tttgaaactaaaattgatcgtagaaagagtagataatccgatga 156  Q
    |||||||||||||||||| || |||||||||| |||||||||||    
T  2189 tttgaaactaaaattgattgttgaaagagtaggtaatccgatga 2146  T

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Target: scaffold0485 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0485
Description:

Target: scaffold0485; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 319 - 358
Target Start/End: Complemental strand, 4496 - 4457
Alignment:
Q  319 tttgatgtggtaaatgtttgatgatgatttttgatgatga 358  Q
    ||||||||||||| ||||||||||||||| ||||||||||    
T  4496 tttgatgtggtaattgtttgatgatgattattgatgatga 4457  T

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Target: scaffold1800 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold1800
Description:

Target: scaffold1800; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 24 - 118
Target Start/End: Complemental strand, 645 - 552
Alignment:
Q  24 gactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaaggtttgaa 118  Q
    |||||||||||||||||||| ||| | |||| || || || |||||||| |||| |||||| |||  |||||||||| ||||| | |||||||||    
T  645 gactaaccttctttaatcatgagtctataattcttaaaaatggtttaattttgttgttgttgata-attttgatgttatagaagttaggtttgaa 552  T

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Target: scaffold0261 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 24 - 105
Target Start/End: Original strand, 6434 - 6514
Alignment:
Q  24 gactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatc-ttgtagttgttaataggttttgatgttgtaga 105  Q
    ||||||||||| ||||||||||||||||||| || || |||||||||| | |||||||||||  || ||||||||||| ||||    
T  6434 gactaaccttcattaatcataagtatgtaattct-aaaaagggtttaacctttgtagttgttgtta-gttttgatgttataga 6514  T

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Target: scaffold0213 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 112
Target Start/End: Complemental strand, 19217 - 19157
Alignment:
Q  51 taatcctgaagaagggtttaatcttgtagttgttaataggttttgatgttgtagaattaagg 112  Q
    |||| ||||| |||||||||| ||||||||||||| || ||||||||||| ||||| |||||    
T  19217 taattctgaaaaagggtttaaccttgtagttgttatta-gttttgatgttatagaaataagg 19157  T

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Target: scaffold0125 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 24 - 84
Target Start/End: Complemental strand, 28589 - 28528
Alignment:
Q  24 gactaaccttctttaatcataagtatgtaatcctgaagaagggtttaatc-ttgtagttgtt 84  Q
    ||||||||||| |||||||| ||||| |||| ||||| |||||||||| | |||||||||||    
T  28589 gactaaccttccttaatcatgagtatataattctgaaaaagggtttaacctttgtagttgtt 28528  T

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