View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16141_high_30 (Length: 212)
Name: NF16141_high_30
Description: NF16141
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16141_high_30 |
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Alignment Details
Target: chr8 (Bit Score: 189; Significance: 1e-103; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 189; E-Value: 1e-103
Query Start/End: Original strand, 1 - 197
Target Start/End: Complemental strand, 10714285 - 10714089
Alignment:
| Q |
1 |
tacctttgcacgagatcaatgcagcagcaacacggtccttcgtatacattgtaaagttctccaaacgcaccattgttagatctaacagtaaggatgattg |
100 |
Q |
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| T |
10714285 |
tacctttgcacgagatcaatgcagcagcagcacggtccttcgtatacattgtaaagttctccaaacgcaccattgttagatctaacagtaaggatgattg |
10714186 |
T |
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| Q |
101 |
aaggttgtgatattaggatgaagaaatagaatggggtggttaaaaatagaaagggtttatttttacaataatatagtgccgttaaatatgtttagac |
197 |
Q |
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| T |
10714185 |
aaggttgtgatattaggatgaagaaatagaatggggtggttaaaaatagaaagggtttatttttacaataatacagtgccgttaaatatgtttagac |
10714089 |
T |
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