View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16145_low_6 (Length: 215)

Name: NF16145_low_6
Description: NF16145
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16145_low_6
NF16145_low_6
[»] chr2 (32 HSPs)
chr2 (1-215)||(19886509-19886723)
chr2 (12-215)||(11231188-11231393)
chr2 (12-215)||(22513035-22513240)
chr2 (12-215)||(24685631-24685836)
chr2 (12-215)||(28775657-28775862)
chr2 (12-160)||(34824676-34824825)
chr2 (12-160)||(12728593-12728742)
chr2 (12-160)||(3798509-3798658)
chr2 (12-160)||(8944047-8944196)
chr2 (12-186)||(42177849-42178024)
chr2 (12-160)||(16935794-16935943)
chr2 (12-160)||(17006454-17006603)
chr2 (12-148)||(23777963-23778100)
chr2 (12-160)||(12635774-12635923)
chr2 (12-148)||(12641560-12641697)
chr2 (45-160)||(23774370-23774486)
chr2 (45-148)||(5888548-5888652)
chr2 (117-215)||(24826548-24826646)
chr2 (14-94)||(21142098-21142178)
chr2 (2-63)||(25265402-25265463)
chr2 (117-161)||(25213372-25213416)
chr2 (2-63)||(8891432-8891493)
chr2 (3-63)||(462929-462989)
chr2 (3-63)||(36982453-36982513)
chr2 (13-60)||(19794719-19794766)
chr2 (13-63)||(14906452-14906502)
chr2 (13-63)||(19689413-19689463)
chr2 (2-60)||(20627328-20627386)
chr2 (13-63)||(23820272-23820322)
chr2 (2-44)||(24341420-24341462)
chr2 (2-63)||(7507856-7507917)
chr2 (2-43)||(43642989-43643030)
[»] chr5 (37 HSPs)
chr5 (1-215)||(12564-12778)
chr5 (1-215)||(21073443-21073657)
chr5 (1-215)||(18777840-18778054)
chr5 (1-215)||(19500089-19500302)
chr5 (2-215)||(4199833-4200046)
chr5 (1-215)||(22366328-22366543)
chr5 (1-162)||(25426818-25426979)
chr5 (2-209)||(43443251-43443456)
chr5 (2-215)||(29188133-29188345)
chr5 (12-215)||(10777820-10778025)
chr5 (12-215)||(27010042-27010244)
chr5 (12-215)||(7425525-7425729)
chr5 (12-185)||(11211946-11212120)
chr5 (12-215)||(21932231-21932436)
chr5 (12-215)||(21938401-21938606)
chr5 (12-215)||(35582237-35582442)
chr5 (12-160)||(35791004-35791153)
chr5 (12-160)||(1219426-1219575)
chr5 (12-160)||(17471494-17471643)
chr5 (12-199)||(22882951-22883139)
chr5 (12-215)||(36989620-36989825)
chr5 (12-160)||(23514762-23514911)
chr5 (45-160)||(23328791-23328907)
chr5 (45-160)||(24616395-24616511)
chr5 (45-160)||(24712771-24712887)
chr5 (45-160)||(24745789-24745905)
chr5 (2-63)||(34939467-34939528)
chr5 (117-215)||(11343008-11343107)
chr5 (2-63)||(18531079-18531140)
chr5 (2-63)||(22053845-22053906)
chr5 (2-63)||(23507155-23507216)
chr5 (2-63)||(25900418-25900479)
chr5 (117-215)||(16105967-16106066)
chr5 (13-63)||(20623170-20623220)
chr5 (13-63)||(21233540-21233590)
chr5 (13-63)||(37052945-37052995)
chr5 (2-63)||(27182559-27182620)
[»] chr8 (26 HSPs)
chr8 (2-215)||(24549172-24549383)
chr8 (12-215)||(21851814-21852016)
chr8 (2-215)||(30120913-30121127)
chr8 (12-215)||(21844421-21844623)
chr8 (2-215)||(6774109-6774319)
chr8 (2-209)||(16674248-16674453)
chr8 (12-215)||(271210-271415)
chr8 (12-215)||(644505-644710)
chr8 (12-215)||(830240-830445)
chr8 (12-160)||(22006164-22006313)
chr8 (38-215)||(15319009-15319188)
chr8 (38-215)||(15499378-15499557)
chr8 (12-160)||(13720834-13720983)
chr8 (12-160)||(16195432-16195581)
chr8 (12-215)||(22088644-22088849)
chr8 (12-160)||(16872957-16873106)
chr8 (37-160)||(13662171-13662295)
chr8 (2-63)||(16404987-16405048)
chr8 (2-59)||(17345759-17345816)
chr8 (2-63)||(16193728-16193789)
chr8 (2-63)||(24928803-24928864)
chr8 (12-69)||(43373474-43373531)
chr8 (13-63)||(5238288-5238338)
chr8 (13-63)||(22907226-22907276)
chr8 (13-63)||(24661260-24661310)
chr8 (13-63)||(43685747-43685797)
[»] chr7 (31 HSPs)
chr7 (2-215)||(10989600-10989814)
chr7 (2-215)||(13910872-13911085)
chr7 (2-215)||(16478812-16479023)
chr7 (2-215)||(2437648-2437862)
chr7 (12-215)||(13572877-13573079)
chr7 (12-215)||(18979872-18980076)
chr7 (12-215)||(7822929-7823134)
chr7 (12-215)||(7830240-7830445)
chr7 (12-215)||(27176634-27176839)
chr7 (12-160)||(15950697-15950846)
chr7 (12-215)||(27101487-27101692)
chr7 (12-215)||(27108835-27109040)
chr7 (12-215)||(38783579-38783784)
chr7 (12-215)||(15927769-15927973)
chr7 (12-160)||(13758571-13758720)
chr7 (12-160)||(15760020-15760169)
chr7 (2-148)||(18253761-18253908)
chr7 (66-148)||(15862174-15862257)
chr7 (12-154)||(14250810-14250953)
chr7 (12-110)||(48622623-48622721)
chr7 (45-148)||(16418731-16418835)
chr7 (45-148)||(10000288-10000392)
chr7 (2-63)||(13321206-13321267)
chr7 (2-63)||(47481043-47481104)
chr7 (2-63)||(13037026-13037087)
chr7 (3-63)||(16211957-16212017)
chr7 (2-63)||(11580751-11580812)
chr7 (117-185)||(15516725-15516793)
chr7 (13-63)||(11516428-11516478)
chr7 (13-63)||(15441576-15441626)
chr7 (13-63)||(30262141-30262191)
[»] scaffold0023 (4 HSPs)
scaffold0023 (2-215)||(36284-36497)
scaffold0023 (24-215)||(169759-169951)
scaffold0023 (12-160)||(153913-154062)
scaffold0023 (2-63)||(48788-48849)
[»] scaffold0420 (1 HSPs)
scaffold0420 (2-215)||(13175-13386)
[»] chr6 (28 HSPs)
chr6 (1-215)||(27653831-27654045)
chr6 (1-208)||(25175753-25175961)
chr6 (3-137)||(16825678-16825812)
chr6 (12-215)||(22251416-22251621)
chr6 (12-215)||(22225588-22225793)
chr6 (12-215)||(16232093-16232297)
chr6 (2-148)||(1650022-1650166)
chr6 (12-215)||(16376223-16376428)
chr6 (12-215)||(16383547-16383752)
chr6 (12-215)||(10488900-10489105)
chr6 (12-215)||(16555989-16556194)
chr6 (12-215)||(16632545-16632750)
chr6 (12-215)||(18086674-18086878)
chr6 (41-199)||(19299467-19299626)
chr6 (12-160)||(1556206-1556355)
chr6 (12-160)||(19610219-19610368)
chr6 (2-215)||(14625978-14626191)
chr6 (12-160)||(23977970-23978119)
chr6 (45-215)||(29869627-29869798)
chr6 (12-148)||(13620712-13620849)
chr6 (2-144)||(29666064-29666208)
chr6 (2-61)||(15862661-15862720)
chr6 (2-63)||(1657760-1657821)
chr6 (2-63)||(35009451-35009512)
chr6 (12-62)||(27751625-27751675)
chr6 (117-161)||(4991396-4991440)
chr6 (2-61)||(23153637-23153696)
chr6 (131-215)||(16814846-16814931)
[»] scaffold0008 (2 HSPs)
scaffold0008 (2-215)||(31523-31736)
scaffold0008 (3-63)||(128181-128241)
[»] chr4 (27 HSPs)
chr4 (2-215)||(10644410-10644621)
chr4 (1-160)||(47357844-47358001)
chr4 (12-215)||(18169171-18169375)
chr4 (12-215)||(15287096-15287300)
chr4 (12-215)||(15294205-15294409)
chr4 (12-160)||(7131971-7132120)
chr4 (12-160)||(20000924-20001073)
chr4 (14-160)||(18248421-18248568)
chr4 (12-160)||(17145563-17145712)
chr4 (12-148)||(19020687-19020824)
chr4 (45-215)||(22351915-22352086)
chr4 (37-139)||(8378377-8378480)
chr4 (45-160)||(26339253-26339369)
chr4 (12-110)||(22738470-22738568)
chr4 (117-215)||(14952085-14952183)
chr4 (2-63)||(15675101-15675162)
chr4 (74-148)||(9795490-9795564)
chr4 (12-63)||(33240900-33240951)
chr4 (2-63)||(10104262-10104323)
chr4 (2-63)||(54118256-54118317)
chr4 (3-63)||(122080-122140)
chr4 (13-63)||(10488763-10488813)
chr4 (13-63)||(16327938-16327988)
chr4 (13-63)||(26680401-26680451)
chr4 (2-44)||(31115819-31115861)
chr4 (107-148)||(8378483-8378524)
chr4 (116-148)||(14996444-14996476)
[»] chr3 (29 HSPs)
chr3 (2-215)||(41270266-41270478)
chr3 (2-215)||(55316410-55316622)
chr3 (12-215)||(49232637-49232842)
chr3 (12-215)||(12264641-12264847)
chr3 (12-215)||(22275410-22275615)
chr3 (2-160)||(16821330-16821486)
chr3 (12-215)||(1467589-1467794)
chr3 (12-185)||(15468221-15468395)
chr3 (3-148)||(15615025-15615168)
chr3 (12-185)||(25058940-25059114)
chr3 (12-160)||(18911194-18911343)
chr3 (12-215)||(12812042-12812247)
chr3 (12-160)||(18896950-18897099)
chr3 (12-148)||(12902008-12902145)
chr3 (2-148)||(15936553-15936700)
chr3 (2-160)||(54651648-54651807)
chr3 (12-160)||(5228514-5228662)
chr3 (2-148)||(15938395-15938542)
chr3 (12-94)||(44229186-44229268)
chr3 (14-185)||(14842451-14842622)
chr3 (2-63)||(13839084-13839145)
chr3 (2-63)||(15859036-15859097)
chr3 (2-63)||(51158030-51158091)
chr3 (3-63)||(12030159-12030219)
chr3 (116-160)||(8268639-8268683)
chr3 (116-160)||(8275739-8275783)
chr3 (13-63)||(2449250-2449300)
chr3 (2-63)||(17912495-17912555)
chr3 (3-63)||(2050001-2050061)
[»] scaffold1711 (1 HSPs)
scaffold1711 (2-215)||(1153-1365)
[»] chr1 (22 HSPs)
chr1 (2-215)||(5072237-5072449)
chr1 (12-215)||(18059608-18059813)
chr1 (2-185)||(22227999-22228183)
chr1 (2-185)||(22232696-22232880)
chr1 (2-148)||(2116445-2116589)
chr1 (2-130)||(18601052-18601179)
chr1 (12-215)||(17148768-17148974)
chr1 (12-215)||(17004839-17005044)
chr1 (2-148)||(45051613-45051757)
chr1 (12-215)||(38054941-38055146)
chr1 (10-160)||(46523588-46523738)
chr1 (41-199)||(19962366-19962525)
chr1 (45-160)||(22035681-22035797)
chr1 (45-160)||(7640840-7640956)
chr1 (117-185)||(15861290-15861358)
chr1 (3-63)||(20913221-20913281)
chr1 (3-63)||(20931536-20931596)
chr1 (2-63)||(20445869-20445930)
chr1 (2-63)||(20893638-20893699)
chr1 (2-63)||(20531634-20531695)
chr1 (2-63)||(37844462-37844523)
chr1 (2-63)||(41394412-41394473)
[»] scaffold0076 (2 HSPs)
scaffold0076 (2-215)||(43188-43400)
scaffold0076 (12-215)||(39304-39509)
[»] scaffold0213 (2 HSPs)
scaffold0213 (37-206)||(29388-29558)
scaffold0213 (178-215)||(29563-29600)
[»] scaffold0139 (2 HSPs)
scaffold0139 (12-215)||(20963-21167)
scaffold0139 (12-215)||(13909-14112)
[»] scaffold0529 (1 HSPs)
scaffold0529 (2-160)||(3153-3311)
[»] scaffold0026 (2 HSPs)
scaffold0026 (16-215)||(64372-64570)
scaffold0026 (2-148)||(107937-108084)
[»] scaffold0215 (2 HSPs)
scaffold0215 (2-148)||(9266-9410)
scaffold0215 (2-148)||(16164-16308)
[»] scaffold0116 (1 HSPs)
scaffold0116 (12-160)||(236-381)
[»] scaffold0107 (2 HSPs)
scaffold0107 (12-215)||(31510-31715)
scaffold0107 (12-100)||(39847-39935)
[»] scaffold0369 (1 HSPs)
scaffold0369 (2-185)||(3913-4097)
[»] scaffold0022 (1 HSPs)
scaffold0022 (2-185)||(5093-5277)
[»] scaffold0092 (1 HSPs)
scaffold0092 (37-185)||(10629-10778)
[»] scaffold0191 (1 HSPs)
scaffold0191 (14-215)||(7306-7509)
[»] scaffold1500 (1 HSPs)
scaffold1500 (12-185)||(1395-1569)
[»] scaffold0383 (1 HSPs)
scaffold0383 (12-160)||(2593-2743)
[»] scaffold0761 (1 HSPs)
scaffold0761 (12-185)||(1456-1630)
[»] scaffold0183 (1 HSPs)
scaffold0183 (45-207)||(6831-6994)
[»] scaffold0467 (1 HSPs)
scaffold0467 (12-160)||(10245-10394)
[»] scaffold0155 (1 HSPs)
scaffold0155 (47-215)||(23600-23769)
[»] scaffold0017 (1 HSPs)
scaffold0017 (12-110)||(54075-54173)
[»] scaffold0892 (1 HSPs)
scaffold0892 (35-110)||(3637-3712)
[»] scaffold0012 (2 HSPs)
scaffold0012 (12-148)||(34076-34213)
scaffold0012 (2-63)||(247454-247515)
[»] scaffold0516 (1 HSPs)
scaffold0516 (45-148)||(12045-12149)
[»] scaffold0066 (2 HSPs)
scaffold0066 (2-148)||(45221-45369)
scaffold0066 (2-148)||(54607-54755)
[»] scaffold0003 (1 HSPs)
scaffold0003 (45-148)||(7443-7547)
[»] scaffold0028 (2 HSPs)
scaffold0028 (117-215)||(130880-130979)
scaffold0028 (2-63)||(89466-89527)
[»] scaffold0075 (1 HSPs)
scaffold0075 (2-63)||(34472-34533)
[»] scaffold0361 (1 HSPs)
scaffold0361 (2-69)||(3380-3447)
[»] scaffold0125 (1 HSPs)
scaffold0125 (2-60)||(41838-41896)
[»] scaffold0413 (1 HSPs)
scaffold0413 (2-148)||(5991-6137)
[»] scaffold0302 (1 HSPs)
scaffold0302 (2-63)||(12303-12364)
[»] scaffold0175 (1 HSPs)
scaffold0175 (2-160)||(871-1029)
[»] scaffold0162 (2 HSPs)
scaffold0162 (2-63)||(8192-8253)
scaffold0162 (3-63)||(26427-26487)
[»] scaffold0132 (1 HSPs)
scaffold0132 (2-63)||(13696-13757)
[»] scaffold0367 (1 HSPs)
scaffold0367 (117-215)||(17142-17241)
[»] scaffold0032 (1 HSPs)
scaffold0032 (74-148)||(13268-13342)
[»] scaffold1542 (1 HSPs)
scaffold1542 (2-63)||(546-607)
[»] scaffold0266 (1 HSPs)
scaffold0266 (2-63)||(3594-3655)
[»] scaffold0025 (2 HSPs)
scaffold0025 (2-63)||(9039-9100)
scaffold0025 (3-44)||(148912-148953)
[»] scaffold0195 (2 HSPs)
scaffold0195 (3-63)||(19397-19457)
scaffold0195 (3-63)||(21481-21541)
[»] scaffold0772 (1 HSPs)
scaffold0772 (12-63)||(5729-5780)
[»] scaffold0106 (1 HSPs)
scaffold0106 (12-63)||(41929-41980)
[»] scaffold0013 (1 HSPs)
scaffold0013 (124-215)||(154282-154373)
[»] scaffold0077 (1 HSPs)
scaffold0077 (3-60)||(36928-36985)
[»] scaffold0049 (1 HSPs)
scaffold0049 (2-63)||(48377-48438)
[»] scaffold0011 (1 HSPs)
scaffold0011 (2-63)||(123176-123237)
[»] scaffold0498 (1 HSPs)
scaffold0498 (3-63)||(9069-9129)
[»] scaffold0018 (1 HSPs)
scaffold0018 (3-63)||(51194-51254)
[»] scaffold0141 (2 HSPs)
scaffold0141 (13-63)||(22741-22791)
scaffold0141 (13-63)||(26996-27046)
[»] scaffold0124 (1 HSPs)
scaffold0124 (13-63)||(1594-1644)
[»] scaffold0078 (1 HSPs)
scaffold0078 (13-63)||(37078-37128)
[»] scaffold0001 (2 HSPs)
scaffold0001 (2-63)||(172095-172156)
scaffold0001 (2-63)||(177798-177859)


Alignment Details
Target: chr2 (Bit Score: 179; Significance: 9e-97; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 179; E-Value: 9e-97
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 19886723 - 19886509
Alignment:
Q  1 tatacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19886723 tatacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgaga 19886624  T
Q  101 atatgcaaaattatacatgattatgataatcactaacccccttacctttgaagatgattatccttaatcctagcttcacttcagcctctaggtcacccac 200  Q
    | ||||||||||| |||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||| |||| ||||||  |||||||||||||    
T  19886623 aaatgcaaaattacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagtttcaattcagctcctaggtcacccac 19886524  T
Q  201 ttgattcctcaagct 215  Q
    ||||||||| |||||    
T  19886523 ttgattcctaaagct 19886509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 12 - 215
Target Start/End: Complemental strand, 11231393 - 11231188
Alignment:
Q  12 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaatatgcaaa-a 110  Q
    |||||||||| ||| |  || ||| |||||||||||||||||||||||| ||  ||||||||| |||||||||||||||||||||||||| ||||||| |    
T  11231393 catcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgagaaaatgcaaaga 11231294  T
Q  111 ttatacatgattatgataatcactaacccccttacctttgaagatgattatccttaatcctagcttcacttcagcctctaggtcaccc-acttgattcct 209  Q
    || ||||||||||||||||| |||||||||||||||||||||| ||||||||  ||| ||| |||||| ||||||  ||||||||||| | ||||||||     
T  11231293 ttgtacatgattatgataataactaacccccttacctttgaagttgattatctctaacccttgcttcaattcagctcctaggtcacccaaattgattccc 11231194  T
Q  210 caagct 215  Q
    ||||||    
T  11231193 caagct 11231188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 12 - 215
Target Start/End: Complemental strand, 22513240 - 22513035
Alignment:
Q  12 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaatatgcaaa-a 110  Q
    |||||||||| ||| |  || ||| |||||||||||||||||||||||| ||  ||||||||| |||||||||||||||||||||||||| ||||||| |    
T  22513240 catcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgagaaaatgcaaaga 22513141  T
Q  111 ttatacatgattatgataatcactaacccccttacctttgaagatgattatccttaatcctagcttcacttcagcctctaggtcaccc-acttgattcct 209  Q
    || ||||||||||||||||| |||||||||||||||||||||| ||||||||  ||| ||| |||||| ||||||  ||||||||||| | ||||||||     
T  22513140 ttgtacatgattatgataataactaacccccttacctttgaagttgattatctctaacccttgcttcaattcagctcctaggtcacccaaattgattccc 22513041  T
Q  210 caagct 215  Q
    ||||||    
T  22513040 caagct 22513035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 12 - 215
Target Start/End: Complemental strand, 24685836 - 24685631
Alignment:
Q  12 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaatatgcaaa-a 110  Q
    |||||||||| ||| |  || ||| |||||||||||||||||||||||| ||  ||||||||| |||||||||||||||||||||||||| ||||||| |    
T  24685836 catcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgagaaaatgcaaaga 24685737  T
Q  111 ttatacatgattatgataatcactaacccccttacctttgaagatgattatccttaatcctagcttcacttcagcctctaggtcaccc-acttgattcct 209  Q
    || ||||||||||||||||| |||||||||||||||||||||| ||||||||  ||| ||| |||||| ||||||  ||||||||||| | ||||||||     
T  24685736 ttgtacatgattatgataataactaacccccttacctttgaagttgattatctctaacccttgcttcaattcagctcctaggtcacccaaattgattccc 24685637  T
Q  210 caagct 215  Q
    ||||||    
T  24685636 caagct 24685631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 12 - 215
Target Start/End: Complemental strand, 28775862 - 28775657
Alignment:
Q  12 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaatatgcaaa-a 110  Q
    |||||||||| ||| |  || ||| |||||||||||||||||||||||| ||  ||||||||| |||||||||||||||||||||||||| ||||||| |    
T  28775862 catcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgagaaaatgcaaaga 28775763  T
Q  111 ttatacatgattatgataatcactaacccccttacctttgaagatgattatccttaatcctagcttcacttcagcctctaggtcaccc-acttgattcct 209  Q
    || ||||||||||||||||| |||||||||||||||||||||| ||||||||  ||| ||| |||||| ||||||  ||||||||||| | ||||||||     
T  28775762 ttgtacatgattatgataataactaacccccttacctttgaagttgattatctctaacccttgcttcaattcagctcctaggtcacccaaattgattccc 28775663  T
Q  210 caagct 215  Q
    ||||||    
T  28775662 caagct 28775657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 12 - 160
Target Start/End: Original strand, 34824676 - 34824825
Alignment:
Q  12 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaatatgc-aaaa 110  Q
    |||||||||||||| |  || ||| |||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||| |||| ||||    
T  34824676 catcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaa 34824775  T
Q  111 ttatacatgattatgataatcactaacccccttacctttgaagatgatta 160  Q
    || ||||||||||||||||||||||||||||||||||| ||||| |||||    
T  34824776 ttgtacatgattatgataatcactaacccccttaccttagaagaagatta 34824825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 12 - 160
Target Start/End: Original strand, 12728593 - 12728742
Alignment:
Q  12 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaatatgc-aaaa 110  Q
    |||||||||||||| |  || ||| |||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||| |||| ||||    
T  12728593 catcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaa 12728692  T
Q  111 ttatacatgattatgataatcactaacccccttacctttgaagatgatta 160  Q
    || ||||||||||||||||| ||||||||||||||||| ||||| |||||    
T  12728693 ttgtacatgattatgataataactaacccccttaccttagaagaagatta 12728742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 12 - 160
Target Start/End: Complemental strand, 3798658 - 3798509
Alignment:
Q  12 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaatatgc-aaaa 110  Q
    |||||||||||||| |  || ||||||| ||| ||||||||||||||||||   |||||||||||||||||||||||||||||||||||| |||| ||||    
T  3798658 catcaattcatgcacaagaaaataacattacaacaagagcacgaatttagccacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaa 3798559  T
Q  111 ttatacatgattatgataatcactaacccccttacctttgaagatgatta 160  Q
    |||||||||||||||||||| ||||||||||||||||| ||||| |||||    
T  3798558 ttatacatgattatgataataactaacccccttaccttagaagaagatta 3798509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 12 - 160
Target Start/End: Original strand, 8944047 - 8944196
Alignment:
Q  12 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaatatgc-aaaa 110  Q
    |||||||||||||| |  || ||| ||||||| |||||||||||||||||||  |||||||||||||||||||||||||||||||||||| |||| ||||    
T  8944047 catcaattcatgcacaagaaaatagcatcacaacaagagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaa 8944146  T
Q  111 ttatacatgattatgataatcactaacccccttacctttgaagatgatta 160  Q
    || ||||||||||||||||| ||||||||||||||||| ||||| |||||    
T  8944147 ttgtacatgattatgataataactaacccccttaccttagaagaagatta 8944196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 12 - 186
Target Start/End: Complemental strand, 42178024 - 42177849
Alignment:
Q  12 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaatatgc-aaaa 110  Q
    |||||||||||||| |  || ||| ||| ||| |||||||||||||||||||  |||||||||||||||||||||||||||||||||||| |||| ||||    
T  42178024 catcaattcatgcacaagaaaatagcattacaacaagagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaa 42177925  T
Q  111 ttatacatgattatgataatcactaacccccttacctttgaagatgattatccttaatcctagcttcacttcagcc 186  Q
    || ||||||||||||||||| ||||||||||||||||| ||||| ||||| ||| ||  || |||||| |||||||    
T  42177924 ttgtacatgattatgataataactaacccccttaccttagaagaagattaacctaaactcttgcttcaattcagcc 42177849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 12 - 160
Target Start/End: Original strand, 16935794 - 16935943
Alignment:
Q  12 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaatatgc-aaaa 110  Q
    |||||||||||||| |  || ||| |||||||||||||||| ||||||| ||  |||||||||||||||||||||||||||||||||||| |||| ||||    
T  16935794 catcaattcatgcacaagaaaatagcatcacagcaagagcatgaatttaacaacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaa 16935893  T
Q  111 ttatacatgattatgataatcactaacccccttacctttgaagatgatta 160  Q
    || ||||||||||||||||| ||||||||||||||||| ||||| |||||    
T  16935894 ttgtacatgattatgataataactaacccccttaccttagaagaagatta 16935943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 12 - 160
Target Start/End: Original strand, 17006454 - 17006603
Alignment:
Q  12 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaatatgc-aaaa 110  Q
    |||||||||||||| |  || ||| |||||||||||||||| ||||||| ||  |||||||||||||||||||||||||||||||||||| |||| ||||    
T  17006454 catcaattcatgcacaagaaaatagcatcacagcaagagcatgaatttaacaacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaa 17006553  T
Q  111 ttatacatgattatgataatcactaacccccttacctttgaagatgatta 160  Q
    || ||||||||||||||||| ||||||||||||||||| ||||| |||||    
T  17006554 ttgtacatgattatgataataactaacccccttaccttagaagaagatta 17006603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 12 - 148
Target Start/End: Complemental strand, 23778100 - 23777963
Alignment:
Q  12 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaatatgc-aaaa 110  Q
    ||||||||||||||||  || ||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||| ||||    
T  23778100 catcaattcatgcataagaaaatagcatcacagcaagagcacgaatttagcaagaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaa 23778001  T
Q  111 ttatacatgattatgataatcactaacccccttacctt 148  Q
    ||  ||||||||||||| || ||||||||| |||||||    
T  23778000 ttgaacatgattatgatgataactaacccctttacctt 23777963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 12 - 160
Target Start/End: Complemental strand, 12635923 - 12635774
Alignment:
Q  12 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaatatgc-aaaa 110  Q
    |||||||||||||| |  || ||| ||||||| |||||||||||||||||||  ||||||||||||||| |||||||||||||||||| | |||| ||||    
T  12635923 catcaattcatgcacaagaaaatagcatcacaacaagagcacgaatttagcaacaattgttcatcaacctattttcatacaacatgaggaaatgcaaaaa 12635824  T
Q  111 ttatacatgattatgataatcactaacccccttacctttgaagatgatta 160  Q
    || ||||||||||||||||| ||||||||||||||||| ||||| |||||    
T  12635823 ttgtacatgattatgataataactaacccccttaccttagaagaagatta 12635774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 12 - 148
Target Start/End: Complemental strand, 12641697 - 12641560
Alignment:
Q  12 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaatatgc-aaaa 110  Q
    |||||||||||||| |  || ||||||| ||| ||||||||||||||||||   |||||||||||||||||||||||||||||||||||| |||| ||||    
T  12641697 catcaattcatgcacaagaaaataacattacaacaagagcacgaatttagccacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaa 12641598  T
Q  111 ttatacatgattatgataatcactaacccccttacctt 148  Q
    || ||||||||||||||||| |||||||||||||||||    
T  12641597 ttgtacatgattatgataataactaacccccttacctt 12641560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 45 - 160
Target Start/End: Original strand, 23774370 - 23774486
Alignment:
Q  45 caagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaatatgcaaaa-ttatacatgattatgataatcactaaccccctt 143  Q
    |||||||||||||||  ||||||||||||||||||||||||||||||||||||| || ||| |||| ||  || ||||||||||||| ||||||||||||    
T  23774370 caagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaaaagatgtaaaatttgaacttgattatgataataactaaccccctt 23774469  T
Q  144 acctttgaagatgatta 160  Q
    ||||| ||||| |||||    
T  23774470 accttagaagaagatta 23774486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 45 - 148
Target Start/End: Complemental strand, 5888652 - 5888548
Alignment:
Q  45 caagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaatatgcaaaattataca-tgattatgataatcactaaccccctt 143  Q
    |||||||||||||||  |||||||||||||||||||||||||||||||||||||||| ||| ||||||  | | |||||||||| |  || |||||||||    
T  5888652 caagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagaagatgtaaaatttgaaattgattatgatgaaaacaaaccccctt 5888553  T
Q  144 acctt 148  Q
    |||||    
T  5888552 acctt 5888548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 117 - 215
Target Start/End: Complemental strand, 24826646 - 24826548
Alignment:
Q  117 atgattatgataatcactaacccccttacctttgaagatgattatccttaatcctagcttcacttcagcctctaggtcacccacttgattcctcaagct 215  Q
    ||||||||||| || ||||||||| |||||||||||| ||||||||  ||| ||| |||||| ||||||  |||||||||||||||||||||| |||||    
T  24826646 atgattatgatgatgactaacccctttacctttgaagttgattatctctaacccttgcttcaattcagctcctaggtcacccacttgattcctaaagct 24826548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 14 - 94
Target Start/End: Original strand, 21142098 - 21142178
Alignment:
Q  14 tcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaac 94  Q
    |||||||||||| |  || ||| ||||||| |||||||||||||||| ||| |||||||||||||||||||||||||||||    
T  21142098 tcaattcatgcacaagaaaatagcatcacaacaagagcacgaatttaacatcaattgttcatcaacccattttcatacaac 21142178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 2 - 63
Target Start/End: Complemental strand, 25265463 - 25265402
Alignment:
Q  2 atacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 63  Q
    |||||| || |||||||||||||||||||||||||||||| ||  |||||||||||||||||    
T  25265463 atacaattatcatcaattcatgcatacaaacataacatcaaagttagagcacgaatttagca 25265402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 117 - 161
Target Start/End: Original strand, 25213372 - 25213416
Alignment:
Q  117 atgattatgataatcactaacccccttacctttgaagatgattat 161  Q
    |||||||||||||  ||||||||||||||||||||||||||||||    
T  25213372 atgattatgataaagactaacccccttacctttgaagatgattat 25213416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 63
Target Start/End: Original strand, 8891432 - 8891493
Alignment:
Q  2 atacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 63  Q
    |||||| || ||||||||||||||||||||||||  |||||||   ||||||||||||||||    
T  8891432 atacaattatcatcaattcatgcatacaaacatattatcacagttggagcacgaatttagca 8891493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 462929 - 462989
Alignment:
Q  3 tacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 63  Q
    ||||| || |||||||||||||||||||| ||| ||||||||   ||||||||||||||||    
T  462929 tacaattatcatcaattcatgcatacaaatatatcatcacagttggagcacgaatttagca 462989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 36982513 - 36982453
Alignment:
Q  3 tacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 63  Q
    ||||| || |||||||||||| ||||||||||| ||||||||   ||||||||||||||||    
T  36982513 tacaattatcatcaattcatgaatacaaacatatcatcacagttggagcacgaatttagca 36982453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 60
Target Start/End: Complemental strand, 19794766 - 19794719
Alignment:
Q  13 atcaattcatgcatacaaacataacatcacagcaagagcacgaattta 60  Q
    ||||||||||||||||||||||| ||||||||   |||||||||||||    
T  19794766 atcaattcatgcatacaaacatatcatcacagttggagcacgaattta 19794719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 63
Target Start/End: Complemental strand, 14906502 - 14906452
Alignment:
Q  13 atcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 63  Q
    ||||||||||||||||||||||| ||||| ||   ||||||||||||||||    
T  14906502 atcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 14906452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 63
Target Start/End: Complemental strand, 19689463 - 19689413
Alignment:
Q  13 atcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 63  Q
    ||||||||||||||||||||||| ||||| ||   ||||||||||||||||    
T  19689463 atcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 19689413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 60
Target Start/End: Complemental strand, 20627386 - 20627328
Alignment:
Q  2 atacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaattta 60  Q
    |||||| || ||||||||| |||||||||||||| ||||||||   |||||||||||||    
T  20627386 atacaattatcatcaattcgtgcatacaaacatatcatcacagttggagcacgaattta 20627328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 63
Target Start/End: Original strand, 23820272 - 23820322
Alignment:
Q  13 atcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 63  Q
    ||||||||||||||||||||||| ||||| ||   ||||||||||||||||    
T  23820272 atcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 23820322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 44
Target Start/End: Complemental strand, 24341462 - 24341420
Alignment:
Q  2 atacaactaacatcaattcatgcatacaaacataacatcacag 44  Q
    |||||| || |||||||||||||||||||||||| ||||||||    
T  24341462 atacaattatcatcaattcatgcatacaaacatatcatcacag 24341420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 2 - 63
Target Start/End: Complemental strand, 7507917 - 7507856
Alignment:
Q  2 atacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 63  Q
    |||||| || |||||||||||||| |  || ||| ||||||| |||||||||||||||||||    
T  7507917 atacaattatcatcaattcatgcacaagaaaatagcatcacaacaagagcacgaatttagca 7507856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 2 - 43
Target Start/End: Complemental strand, 43643030 - 43642989
Alignment:
Q  2 atacaactaacatcaattcatgcatacaaacataacatcaca 43  Q
    |||||| || |||||||||||||||||||||||| |||||||    
T  43643030 atacaattatcatcaattcatgcatacaaacatatcatcaca 43642989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 175; Significance: 2e-94; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 12564 - 12778
Alignment:
Q  1 tatacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12564 tatacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgaga 12663  T
Q  101 atatgcaaaattatacatgattatgataatcactaacccccttacctttgaagatgattatccttaatcctagcttcacttcagcctctaggtcacccac 200  Q
    | || |||||||| |||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| ||||| ||||||  |||||||||||||    
T  12664 aaatacaaaattacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctaacttcaattcagctcctaggtcacccac 12763  T
Q  201 ttgattcctcaagct 215  Q
    ||||||||| |||||    
T  12764 ttgattcctaaagct 12778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 21073657 - 21073443
Alignment:
Q  1 tatacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  21073657 tatacaactaacatccattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcattaacccattttcatacaacatgaga 21073558  T
Q  101 atatgcaaaattatacatgattatgataatcactaacccccttacctttgaagatgattatccttaatcctagcttcacttcagcctctaggtcacccac 200  Q
    | ||||||||||| |||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||| ||||||  |||||||||||||    
T  21073557 aaatgcaaaattacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagcttcaattcagctcctaggtcacccac 21073458  T
Q  201 ttgattcctcaagct 215  Q
    ||||||||| |||||    
T  21073457 ttgattcctaaagct 21073443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 18778054 - 18777840
Alignment:
Q  1 tatacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  18778054 tatacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttaacatgaattgttcatcaacccattttcatacaacatgaga 18777955  T
Q  101 atatgcaaaattatacatgattatgataatcactaacccccttacctttgaagatgattatccttaatcctagcttcacttcagcctctaggtcacccac 200  Q
    | ||||||||||| ||||||||||||||||||||||||||||||||||||||| | ||||||  ||| ||| |||||| ||||||  |||||||||||||    
T  18777954 aaatgcaaaattacacatgattatgataatcactaacccccttacctttgaagttaattatctctaacccttgcttcaattcagctcctaggtcacccac 18777855  T
Q  201 ttgattcctcaagct 215  Q
    |||||||||||||||    
T  18777854 ttgattcctcaagct 18777840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 19500089 - 19500302
Alignment:
Q  1 tatacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  19500089 tatacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaagtgttcatcaacccattttcatacaacatgaga 19500188  T
Q  101 atatgcaaaattatacatgattatgataatcactaacccccttacctttgaagatgattatccttaatcctagcttcacttcagcctctaggtcacccac 200  Q
    | ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||  ||| ||| |||||| ||||||  ||| |||||||||    
T  19500189 aaatgcaaaattacacatgattatgataatcactaacccccttacctttgaagttgattatctctaacccttgcttcaattcagctccta-gtcacccac 19500287  T
Q  201 ttgattcctcaagct 215  Q
    |||||||||||||||    
T  19500288 ttgattcctcaagct 19500302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 2 - 215
Target Start/End: Complemental strand, 4200046 - 4199833
Alignment:
Q  2 atacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaa 101  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  4200046 atacaactaacatcaattcatgcatacaaacataacatcacaacaagagcacgaatttagcatgaattattcatcaactcattttcatacaacatgagaa 4199947  T
Q  102 tatgcaaaattatacatgattatgataatcactaacccccttacctttgaagatgattatccttaatcctagcttcacttcagcctctaggtcacccact 201  Q
    |||||||||||| ||||||||||||||||| ||||||||||||||||||||| ||||||||  ||| ||| |||||| ||||||  ||||||||||||||    
T  4199946 tatgcaaaattacacatgattatgataatccctaacccccttacctttgaagttgattatctctaacccttgcttcaattcagctcctaggtcacccact 4199847  T
Q  202 tgattcctcaagct 215  Q
    |||||||| |||||    
T  4199846 tgattcctaaagct 4199833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 22366543 - 22366328
Alignment:
Q  1 tatacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  22366543 tatacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgctcatcaacccattttcatacaacatgaga 22366444  T
Q  101 atatgcaaaattatacatgattatgataatcactaacccccttacctttgaagatgattatccttaatcctagcttcacttcagcctctaggtca-ccca 199  Q
    | ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||  ||| ||| |||||| |||| |  |||||||| ||||    
T  22366443 aaatgcaaaattacacatgattatgataatcactaacccccttacctttgaagttgattatctctaacccttgcttcaattcaactcctaggtcacccca 22366344  T
Q  200 cttgattcctcaagct 215  Q
    ||||||| || |||||    
T  22366343 cttgattgctaaagct 22366328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 25426818 - 25426979
Alignment:
Q  1 tatacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25426818 tatacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgaga 25426917  T
Q  101 atatgcaaaattatacatgattatgataatcactaacccccttacctttgaagatgattatc 162  Q
    | ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  25426918 aaatgcaaaattacacatgattatgataatcactaacccccttacctttgaagttgattatc 25426979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 149; E-Value: 7e-79
Query Start/End: Original strand, 2 - 209
Target Start/End: Complemental strand, 43443456 - 43443251
Alignment:
Q  2 atacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaa 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||    
T  43443456 atacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttaacatgaattgttcatcaatccattttcatataacatgagaa 43443357  T
Q  102 tatgcaaaattatacatgattatgataatcactaacccccttacctttgaagatgattatccttaatcctagcttcacttcagcctctaggtcacccact 201  Q
    |||||  ||||| ||||||||||||||||||||||||||||||||||||||| ||||||||  ||| ||| |||||| ||||||  ||||||||||||||    
T  43443356 tatgc--aattacacatgattatgataatcactaacccccttacctttgaagttgattatctctaacccttgcttcaattcagctcctaggtcacccact 43443259  T
Q  202 tgattcct 209  Q
    ||||||||    
T  43443258 tgattcct 43443251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 2 - 215
Target Start/End: Complemental strand, 29188345 - 29188133
Alignment:
Q  2 atacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaa 101  Q
    |||||| || ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||| ||||||||||||||||||||||||    
T  29188345 atacaattatcatcaattcatgcatacaaacataacatcacagtaagagcacgaatctagcatgaattgttcatcgacccattttcatacaacatgagaa 29188246  T
Q  102 tatgcaaaattatacatgattatgataatcactaacccccttacctttgaagatgattatccttaatcctagcttcacttcagcctctaggtca-cccac 200  Q
     |||||||||  ||||||||||| |||||||||||||||||||||||||||| ||||||||  ||| ||| |||||| ||||||  |||||||| |||||    
T  29188245 aatgcaaaat--tacatgattataataatcactaacccccttacctttgaagttgattatctctaacccttgcttcaattcagctcctaggtcaccccac 29188148  T
Q  201 ttgattcctcaagct 215  Q
    ||||||||| |||||    
T  29188147 ttgattcctaaagct 29188133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 12 - 215
Target Start/End: Complemental strand, 10778025 - 10777820
Alignment:
Q  12 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaatatgc-aaaa 110  Q
    |||||||||||||| |  || ||| |||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||| |||| ||||    
T  10778025 catcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaa 10777926  T
Q  111 ttatacatgattatgataatcactaacccccttacctttgaagatgattatccttaatcctagcttcacttcagcctctaggtca-cccacttgattcct 209  Q
    || |||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||| |||||| ||||||  |||||||| ||||||||||||||    
T  10777925 ttgtacatgattatgataatcactaccccccttacctttgaagatgattatccttaacccttgcttcaattcagctcctaggtcaccccacttgattcct 10777826  T
Q  210 caagct 215  Q
    ||||||    
T  10777825 caagct 10777820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 12 - 215
Target Start/End: Original strand, 27010042 - 27010244
Alignment:
Q  12 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaatatgcaaaat 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||| | ||||||||     
T  27010042 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaaaaa 27010141  T
Q  112 tatacatgattatgataatcactaacccccttacctttgaagatgattatccttaatcctagcttcacttcagcctctaggtcacccacttgattcctca 211  Q
    | ||||||||| ||||||| ||||||||||||||||| ||||| ||||| ||  ||  || |||||| ||||||  ||| |||||||||||||||||| |    
T  27010142 t-tacatgattgtgataataactaacccccttaccttagaagaagattaacccaaactcttgcttcaattcagctcctaagtcacccacttgattcctaa 27010240  T
Q  212 agct 215  Q
    ||||    
T  27010241 agct 27010244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 12 - 215
Target Start/End: Original strand, 7425525 - 7425729
Alignment:
Q  12 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaatatgc-aaaa 110  Q
    |||| ||||||||| |  || |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||| |||| ||||    
T  7425525 catcgattcatgcacaagaaaataacatcacagcaagagcacgaatttagcaataattgttcatcaacccattttcatacaacatgagaaaatgcaaaaa 7425624  T
Q  111 ttatacatgattatgataatcactaacccccttacctttgaagatgattatccttaatcctagcttcacttcagcctctaggtcacccacttgattcctc 210  Q
    || ||||||||||||||||| ||||||||||||||||| ||||| ||||| ||  ||  || |||||| ||||||  ||| ||||||||||||||||||     
T  7425625 ttgtacatgattatgataataactaacccccttaccttagaagaagattaacccaaactcttgcttcaattcagctcctaagtcacccacttgattccta 7425724  T
Q  211 aagct 215  Q
    |||||    
T  7425725 aagct 7425729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 12 - 185
Target Start/End: Complemental strand, 11212120 - 11211946
Alignment:
Q  12 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaatatgc-aaaa 110  Q
    |||||||||||||| |  || ||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||| ||||    
T  11212120 catcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaagaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaa 11212021  T
Q  111 ttatacatgattatgataatcactaacccccttacctttgaagatgattatccttaatcctagcttcacttcagc 185  Q
    ||  |||||||||||||||| ||||||||||||||||||||||||||||| || |||  || |||||| ||||||    
T  11212020 ttgaacatgattatgataataactaacccccttacctttgaagatgattaaccctaactcttgcttcaattcagc 11211946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 12 - 215
Target Start/End: Complemental strand, 21932436 - 21932231
Alignment:
Q  12 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaatatgcaaa-a 110  Q
    |||||||||| ||| |  || ||| |||||||||||||||||||||||| ||  ||||||||| |||||||||||||||||||||||||| ||||||| |    
T  21932436 catcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgagaaaatgcaaaga 21932337  T
Q  111 ttatacatgattatgataatcactaacccccttacctttgaagatgattatccttaatcctagcttcacttcagcctctaggtcaccc-acttgattcct 209  Q
    || ||||||||||||||||| |||||||||||||||||||||| ||||||||  ||| ||| |||||| ||||||  ||||||||||| | |||||||||    
T  21932336 ttgtacatgattatgataataactaacccccttacctttgaagttgattatctctaacccttgcttcaattcagctcctaggtcacccaaattgattcct 21932237  T
Q  210 caagct 215  Q
    ||||||    
T  21932236 caagct 21932231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 12 - 215
Target Start/End: Complemental strand, 21938606 - 21938401
Alignment:
Q  12 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaatatgcaaa-a 110  Q
    |||||||||| ||| |  || ||| |||||||||||||||||||||||| ||  ||||||||| |||||||||||||||||||||||||| ||||||| |    
T  21938606 catcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgagaaaatgcaaaga 21938507  T
Q  111 ttatacatgattatgataatcactaacccccttacctttgaagatgattatccttaatcctagcttcacttcagcctctaggtcaccc-acttgattcct 209  Q
    || ||||||||||||||||| |||||||||||||||||||||| ||||||||  ||| ||| |||||| ||||||  ||||||||||| | |||||||||    
T  21938506 ttgtacatgattatgataataactaacccccttacctttgaagttgattatctctaacccttgcttcaattcagctcctaggtcacccaaattgattcct 21938407  T
Q  210 caagct 215  Q
    ||||||    
T  21938406 caagct 21938401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 12 - 215
Target Start/End: Original strand, 35582237 - 35582442
Alignment:
Q  12 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaatatgcaaa-a 110  Q
    |||||||||| ||| |  || ||| |||||||||||||||||||||||| ||  ||||||||| |||||||||||||||||||||||||| ||||||| |    
T  35582237 catcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgagaaaatgcaaaga 35582336  T
Q  111 ttatacatgattatgataatcactaacccccttacctttgaagatgattatccttaatcctagcttcacttcagcctctaggtcaccc-acttgattcct 209  Q
    || ||||||||||||||||| |||||||||||||||||||||| ||||||||  ||| ||| |||||| ||||||  ||||||||||| | ||||||||     
T  35582337 ttgtacatgattatgataataactaacccccttacctttgaagttgattatctctaacccttgcttcaattcagctcctaggtcacccaaattgattccc 35582436  T
Q  210 caagct 215  Q
    ||||||    
T  35582437 caagct 35582442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 12 - 160
Target Start/End: Complemental strand, 35791153 - 35791004
Alignment:
Q  12 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaatatgc-aaaa 110  Q
    |||||||||||||| |  || |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||| |||| ||||    
T  35791153 catcaattcatgcacaagaaaataacatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaa 35791054  T
Q  111 ttatacatgattatgataatcactaacccccttacctttgaagatgatta 160  Q
    || ||||||||||||||||| ||||||||||||||||| ||||| |||||    
T  35791053 ttgtacatgattatgataataactaacccccttaccttagaagaagatta 35791004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 12 - 160
Target Start/End: Complemental strand, 1219575 - 1219426
Alignment:
Q  12 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaatatgc-aaaa 110  Q
    |||||||| ||||| |  || ||| |||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||| |||| ||||    
T  1219575 catcaattaatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaa 1219476  T
Q  111 ttatacatgattatgataatcactaacccccttacctttgaagatgatta 160  Q
    || ||||||||||||||||||||||||||||||||||| ||||| |||||    
T  1219475 ttgtacatgattatgataatcactaacccccttaccttagaagaagatta 1219426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 12 - 160
Target Start/End: Complemental strand, 17471643 - 17471494
Alignment:
Q  12 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaatatgcaaaa- 110  Q
    |||||||||||||| |  || ||| |||||||||||||||||||||||| ||  |||||||||||||||||||||||||||||||||||| || |||||     
T  17471643 catcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttatcaacaattgttcatcaacccattttcatacaacatgagaaaatacaaaat 17471544  T
Q  111 ttatacatgattatgataatcactaacccccttacctttgaagatgatta 160  Q
    || ||||||||||||||||| |||||||||||||||||||||||||||||    
T  17471543 ttgtacatgattatgataataactaacccccttacctttgaagatgatta 17471494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 12 - 199
Target Start/End: Complemental strand, 22883139 - 22882951
Alignment:
Q  12 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaatatgcaaa-a 110  Q
    |||||||||| ||| |  || ||| ||||||||||||||||| |||||| ||  ||||||||| |||||||||||||||||||||||||| ||||||| |    
T  22883139 catcaattcaagcacaagaaaatagcatcacagcaagagcacaaatttaacaacaattgttcaccaacccattttcatacaacatgagaaaatgcaaaga 22883040  T
Q  111 ttatacatgattatgataatcactaacccccttacctttgaagatgattatccttaatcctagcttcacttcagcctctaggtcaccca 199  Q
    || ||||||||||||||||| ||||||||||||| |||||||| ||||||||| ||| ||| |||||| ||||||  ||||||||||||    
T  22883039 ttgtacatgattatgataataactaacccccttatctttgaagttgattatccctaacccttgcttcaattcagctcctaggtcaccca 22882951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 12 - 215
Target Start/End: Complemental strand, 36989825 - 36989620
Alignment:
Q  12 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaatatgcaaa-a 110  Q
    |||||||||| ||| |  || ||| ||||||||| |||||||||||||| ||  ||||||||| ||||||||||||||||||||||||||  |||||| |    
T  36989825 catcaattcaagcacaagaaaatagcatcacagctagagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgagaaattgcaaaga 36989726  T
Q  111 ttatacatgattatgataatcactaacccccttacctttgaagatgattatccttaatcctagcttcacttcagcctctaggtcaccc-acttgattcct 209  Q
    || ||||||||||||||||| |||||||||||||||||||||| ||||||||  ||| ||| |||||| ||||||  ||||||||||| | ||||||||     
T  36989725 ttgtacatgattatgataataactaacccccttacctttgaagttgattatctctaacccttgcttcaattcagctcctaggtcacccaaattgattccc 36989626  T
Q  210 caagct 215  Q
    ||||||    
T  36989625 caagct 36989620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 12 - 160
Target Start/End: Original strand, 23514762 - 23514911
Alignment:
Q  12 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaatatgc-aaaa 110  Q
    |||||||||||||| |  || ||| |||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||| |||| ||||    
T  23514762 catcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaa 23514861  T
Q  111 ttatacatgattatgataatcactaacccccttacctttgaagatgatta 160  Q
    ||  ||||||||||||| || ||||||||||||||||| ||||| |||||    
T  23514862 ttgaacatgattatgatgataactaacccccttaccttagaagaagatta 23514911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 45 - 160
Target Start/End: Original strand, 23328791 - 23328907
Alignment:
Q  45 caagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaatatgcaaaattataca-tgattatgataatcactaaccccctt 143  Q
    |||||||||||||||  ||||||||||||||||||||||||||||||||||||| || ||| ||||||  | | ||||||||||||| ||||||||||||    
T  23328791 caagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaaaagatgtaaaatttgaaattgattatgataataactaaccccctt 23328890  T
Q  144 acctttgaagatgatta 160  Q
    ||||| ||||| |||||    
T  23328891 accttagaagaagatta 23328907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 45 - 160
Target Start/End: Original strand, 24616395 - 24616511
Alignment:
Q  45 caagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaatatgcaaaattataca-tgattatgataatcactaaccccctt 143  Q
    |||||||||||||||  ||||||||||||||||||||||||||||||||||||| || ||| ||||||  | | ||||||||||||| ||||||||||||    
T  24616395 caagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaaaagatgtaaaatttgaaattgattatgataataactaaccccctt 24616494  T
Q  144 acctttgaagatgatta 160  Q
    ||||| ||||| |||||    
T  24616495 accttagaagaagatta 24616511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 45 - 160
Target Start/End: Original strand, 24712771 - 24712887
Alignment:
Q  45 caagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaatatgcaaaattataca-tgattatgataatcactaaccccctt 143  Q
    |||||||||||||||  ||||||||||||||||||||||||||||||||||||| || ||| ||||||  | | ||||||||||||| ||||||||||||    
T  24712771 caagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaaaagatgtaaaatttgaaattgattatgataataactaaccccctt 24712870  T
Q  144 acctttgaagatgatta 160  Q
    ||||| ||||| |||||    
T  24712871 accttagaagaagatta 24712887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 45 - 160
Target Start/End: Original strand, 24745789 - 24745905
Alignment:
Q  45 caagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaatatgcaaaattataca-tgattatgataatcactaaccccctt 143  Q
    |||||||||||||||  ||||||||||||||||||||||||||||||||||||| || ||| ||||||  | | ||||||||||||| ||||||||||||    
T  24745789 caagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaaaagatgtaaaatttgaaattgattatgataataactaaccccctt 24745888  T
Q  144 acctttgaagatgatta 160  Q
    ||||| ||||| |||||    
T  24745889 accttagaagaagatta 24745905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 2 - 63
Target Start/End: Original strand, 34939467 - 34939528
Alignment:
Q  2 atacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 63  Q
    |||||| || |||||||||||||||||||||||||||||||||  |||||||||||||||||    
T  34939467 atacaattatcatcaattcatgcatacaaacataacatcacagttagagcacgaatttagca 34939528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 117 - 215
Target Start/End: Original strand, 11343008 - 11343107
Alignment:
Q  117 atgattatgataatcactaacccccttacctttgaagatgattatccttaatcctagcttcacttcagcctctaggtca-cccacttgattcctcaagct 215  Q
    |||||||||||||  ||||||||||||||||||||||| ||||| || ||| |   |||||| ||||||  |||||||| ||||||||||||||||||||    
T  11343008 atgattatgataaaaactaacccccttacctttgaagaagattaaccctaacctctgcttcaattcagctcctaggtcaccccacttgattcctcaagct 11343107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 63
Target Start/End: Complemental strand, 18531140 - 18531079
Alignment:
Q  2 atacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 63  Q
    |||||| || |||||||||||||||||||||||| ||||||||   ||||||||||||||||    
T  18531140 atacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagca 18531079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 63
Target Start/End: Complemental strand, 22053906 - 22053845
Alignment:
Q  2 atacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 63  Q
    ||||||||| ||||||||||| |||||||||||| ||||||||   ||||||||||||||||    
T  22053906 atacaactatcatcaattcatacatacaaacatatcatcacagttggagcacgaatttagca 22053845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 63
Target Start/End: Original strand, 23507155 - 23507216
Alignment:
Q  2 atacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 63  Q
    |||||| || |||||||||||||||||||||||| |||||||    ||||||||||||||||    
T  23507155 atacaattatcatcaattcatgcatacaaacatatcatcacaaatggagcacgaatttagca 23507216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 63
Target Start/End: Complemental strand, 25900479 - 25900418
Alignment:
Q  2 atacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 63  Q
    |||||| || |||||||||||||||||||||||| ||||| ||   ||||||||||||||||    
T  25900479 atacaattatcatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 25900418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 117 - 215
Target Start/End: Original strand, 16105967 - 16106066
Alignment:
Q  117 atgattatgataatcactaacccccttacctttgaagatgattatccttaatcctagcttcacttcagcctctaggtca-cccacttgattcctcaagct 215  Q
    |||||||||||||  ||||||||||||||||| ||||| ||||| ||| ||  || |||||| ||||||  |||| | | |||| |||||||||||||||    
T  16105967 atgattatgataaagactaacccccttaccttagaagaagattaacctaaactcttgcttcaattcagctcctagcttaccccaattgattcctcaagct 16106066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 63
Target Start/End: Original strand, 20623170 - 20623220
Alignment:
Q  13 atcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 63  Q
    ||||||||||||||||||||||| ||||| ||   ||||||||||||||||    
T  20623170 atcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 20623220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 63
Target Start/End: Complemental strand, 21233590 - 21233540
Alignment:
Q  13 atcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 63  Q
    ||||||||||||||||||||||| ||||| ||   ||||||||||||||||    
T  21233590 atcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 21233540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 63
Target Start/End: Original strand, 37052945 - 37052995
Alignment:
Q  13 atcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 63  Q
    ||||||||||||||||||||||| ||||| ||   ||||||||||||||||    
T  37052945 atcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 37052995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 2 - 63
Target Start/End: Complemental strand, 27182620 - 27182559
Alignment:
Q  2 atacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 63  Q
    |||||| || ||||| |||||||||||||||||| ||||||||   ||||| ||||||||||    
T  27182620 atacaattatcatcagttcatgcatacaaacatatcatcacagttggagcatgaatttagca 27182559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 163; Significance: 3e-87; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 2 - 215
Target Start/End: Original strand, 24549172 - 24549383
Alignment:
Q  2 atacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaa 101  Q
    |||||| || ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  24549172 atacaattatcatcaattcatgcatacaaacataacatcacagtaagagcacgaatctagcatgaattgttcatcaacccattttcatacaacatgagaa 24549271  T
Q  102 tatgcaaaattatacatgattatgataatcactaacccccttacctttgaagatgattatccttaatcctagcttcacttcagcctctaggtcacccact 201  Q
     |||||||||  ||||||||||||||||||||||||||||||||||| |||| ||||||||||||| |||||||||||||||||  ||||||||||||||    
T  24549272 aatgcaaaat--tacatgattatgataatcactaacccccttaccttagaagttgattatccttaaccctagcttcacttcagctcctaggtcacccact 24549369  T
Q  202 tgattcctcaagct 215  Q
    ||||||||||||||    
T  24549370 tgattcctcaagct 24549383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 12 - 215
Target Start/End: Complemental strand, 21852016 - 21851814
Alignment:
Q  12 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaatatgcaaaat 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||| |||||||||||||||| | ||||||||     
T  21852016 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccaatttcatacaacatgagcaaatgcaaaaa 21851917  T
Q  112 tatacatgattatgataatcactaacccccttacctttgaagatgattatccttaatcctagcttcacttcagcctctaggtcacccacttgattcctca 211  Q
    | ||||||||| ||||||| |||||||||||||||||||||| ||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||    
T  21851916 t-tacatgattgtgataataactaacccccttacctttgaagttgattatccttaatcctagctccacttcagcttctaggtcacccacttgattcctca 21851818  T
Q  212 agct 215  Q
    ||||    
T  21851817 agct 21851814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 151; E-Value: 4e-80
Query Start/End: Original strand, 2 - 215
Target Start/End: Original strand, 30120913 - 30121127
Alignment:
Q  2 atacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaa 101  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||     
T  30120913 atacaactaacataaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaactcattttcatacaacatgagat 30121012  T
Q  102 tatgc-aaaattatacatgattatgataatcactaacccccttacctttgaagatgattatccttaatcctagcttcacttcagcctctaggtcacccac 200  Q
    ||| | ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||  ||| |||  ||||| ||||||  |||||||||||||    
T  30121013 tatacaaaaattacacatgattatgataatcactaacccccttacctttgaagatgattatctctaacccttacttcaattcagctcctaggtcacccac 30121112  T
Q  201 ttgattcctcaagct 215  Q
    ||||||||| |||||    
T  30121113 ttgattcctaaagct 30121127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 12 - 215
Target Start/End: Complemental strand, 21844623 - 21844421
Alignment:
Q  12 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaatatgcaaaat 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||| |||||||||||||||| | ||||||||     
T  21844623 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccaatttcatacaacatgagcaaatgcaaaaa 21844524  T
Q  112 tatacatgattatgataatcactaacccccttacctttgaagatgattatccttaatcctagcttcacttcagcctctaggtcacccacttgattcctca 211  Q
    | ||||||||| ||||||| ||||||||||||||| |||||| ||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||    
T  21844523 t-tacatgattgtgataataactaacccccttaccgttgaagttgattatccttaatcctagctccacttcagcttctaggtcacccacttgattcctca 21844425  T
Q  212 agct 215  Q
    ||||    
T  21844424 agct 21844421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 139; E-Value: 6e-73
Query Start/End: Original strand, 2 - 215
Target Start/End: Complemental strand, 6774319 - 6774109
Alignment:
Q  2 atacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaa 101  Q
    |||||| || ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||| ||||||||||    
T  6774319 atacaattatcatcaattcatgcatacaaacataacatcacagtaagagcacgaatctagcatgaattgttcatcaacccattttcatataacatgagaa 6774220  T
Q  102 tatgcaaaattatacatgattatgataatcactaacccccttacctttgaagatgattatccttaatcctagcttcacttcagcctctaggtcacccact 201  Q
     |||||||||  |||||||||||||||||||||||||||||||||||||||| ||||||||  ||| ||| |||||| ||||||  ||| ||||||||||    
T  6774219 aatgcaaaat--tacatgattatgataatcactaacccccttacctttgaagttgattatctctaacccttgcttcaattcagctccta-gtcacccact 6774123  T
Q  202 tgattcctcaagct 215  Q
    ||||||||||||||    
T  6774122 tgattcctcaagct 6774109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 2 - 209
Target Start/End: Complemental strand, 16674453 - 16674248
Alignment:
Q  2 atacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaa 101  Q
    ||||||||||||| |||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||| |    
T  16674453 atacaactaacataaattcatgcataaaaacataacatcacagaaagagcacgaatttagcatgaattgttcaacaacccattttcatacaacatgagca 16674354  T
Q  102 tatgcaaaattatacatgattatgataatcactaacccccttacctttgaagatgattatccttaatcctagcttcacttcagcctctaggtcacccact 201  Q
     |||||||| | ||||||||| ||||||| ||||||||||||||||| ||||| |||||  || ||  || |||||| ||||||   || ||||||||||    
T  16674353 aatgcaaaaat-tacatgattgtgataataactaacccccttaccttagaagaagatta-actcaactcttgcttcaattcagctcataagtcacccact 16674256  T
Q  202 tgattcct 209  Q
    ||||||||    
T  16674255 tgattcct 16674248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 12 - 215
Target Start/End: Complemental strand, 271415 - 271210
Alignment:
Q  12 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaatatgcaaa-a 110  Q
    |||||||||| ||| |  || ||| |||||||||||||||||||||||| ||  ||||||||| |||||||||||||||||||||||||| ||||||| |    
T  271415 catcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgagaaaatgcaaaga 271316  T
Q  111 ttatacatgattatgataatcactaacccccttacctttgaagatgattatccttaatcctagcttcacttcagcctctaggtcaccc-acttgattcct 209  Q
    || ||||||||||||||||| |||||||||||||||||||||| ||||||||  ||| ||| |||||| ||||||  ||||||||||| | ||||||||     
T  271315 ttgtacatgattatgataataactaacccccttacctttgaagttgattatctctaacccttgcttcaattcagctcctaggtcacccaaattgattccc 271216  T
Q  210 caagct 215  Q
    ||||||    
T  271215 caagct 271210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 12 - 215
Target Start/End: Original strand, 644505 - 644710
Alignment:
Q  12 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaatatgcaaa-a 110  Q
    |||||||||| ||| |  || ||| |||||||||||||||||||||||| ||  ||||||||| |||||||||||||||||||||||||| ||||||| |    
T  644505 catcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgagaaaatgcaaaga 644604  T
Q  111 ttatacatgattatgataatcactaacccccttacctttgaagatgattatccttaatcctagcttcacttcagcctctaggtcaccc-acttgattcct 209  Q
    || ||||||||||||||||| |||||||||||||||||||||| ||||||||  ||| ||| |||||| ||||||  ||||||||||| | ||||||||     
T  644605 ttgtacatgattatgataataactaacccccttacctttgaagttgattatctctaacccttgcttcaattcagctcctaggtcacccaaattgattccc 644704  T
Q  210 caagct 215  Q
    ||||||    
T  644705 caagct 644710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 12 - 215
Target Start/End: Original strand, 830240 - 830445
Alignment:
Q  12 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaatatgcaaa-a 110  Q
    |||||||||| ||| |  || ||| |||||||||||||||||||||||| ||  ||||||||| |||||||||||||||||||||||||| ||||||| |    
T  830240 catcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgagaaaatgcaaaga 830339  T
Q  111 ttatacatgattatgataatcactaacccccttacctttgaagatgattatccttaatcctagcttcacttcagcctctaggtcaccc-acttgattcct 209  Q
    || ||||||||||||||||| |||||||||||||||||||||| ||||||||  ||| ||| |||||| ||||||  ||||||||||| | ||||||||     
T  830340 ttgtacatgattatgataataactaacccccttacctttgaagttgattatctctaacccttgcttcaattcagctcctaggtcacccaaattgattccc 830439  T
Q  210 caagct 215  Q
    ||||||    
T  830440 caagct 830445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 12 - 160
Target Start/End: Complemental strand, 22006313 - 22006164
Alignment:
Q  12 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaatatgc-aaaa 110  Q
    |||||||||||||| |  || ||| |||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||| |||| ||||    
T  22006313 catcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaa 22006214  T
Q  111 ttatacatgattatgataatcactaacccccttacctttgaagatgatta 160  Q
    || ||||||||||||||||| ||||||||||||||||||||||| |||||    
T  22006213 ttgtacatgattatgataataactaacccccttacctttgaagaagatta 22006164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 38 - 215
Target Start/End: Complemental strand, 15319188 - 15319009
Alignment:
Q  38 atcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaatatgcaaa-attatacatgattatgataatcactaa 136  Q
    ||||||||||||||||||||||| ||  ||||||||| |||||||||||||||||||||||||| ||||||| ||| ||||||||||||||||| |||||    
T  15319188 atcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgagaaaatgcaaagattgtacatgattatgataataactaa 15319089  T
Q  137 cccccttacctttgaagatgattatccttaatcctagcttcacttcagcctctaggtcaccc-acttgattcctcaagct 215  Q
    ||||||||||||||||| ||||||||  ||| ||| |||||| ||||||  ||||||||||| | |||||||| ||||||    
T  15319088 cccccttacctttgaagttgattatctctaacccttgcttcaattcagctcctaggtcacccaaattgattccccaagct 15319009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 38 - 215
Target Start/End: Complemental strand, 15499557 - 15499378
Alignment:
Q  38 atcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaatatgcaaa-attatacatgattatgataatcactaa 136  Q
    ||||||||||||||||||||||| ||  ||||||||| |||||||||||||||||||||||||| ||||||| ||| ||||||||||||||||| |||||    
T  15499557 atcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgagaaaatgcaaagattgtacatgattatgataataactaa 15499458  T
Q  137 cccccttacctttgaagatgattatccttaatcctagcttcacttcagcctctaggtcaccc-acttgattcctcaagct 215  Q
    ||||||||||||||||| ||||||||  ||| ||| |||||| ||||||  ||||||||||| | |||||||| ||||||    
T  15499457 cccccttacctttgaagttgattatctctaacccttgcttcaattcagctcctaggtcacccaaattgattccccaagct 15499378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 12 - 160
Target Start/End: Complemental strand, 13720983 - 13720834
Alignment:
Q  12 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaatatgc-aaaa 110  Q
    |||||||||||||| |  || ||| ||||||| |||||||||||||||||||  |||||||||||||||||||||||||||||||||||| |||| ||||    
T  13720983 catcaattcatgcacaagaaaatagcatcacaacaagagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaa 13720884  T
Q  111 ttatacatgattatgataatcactaacccccttacctttgaagatgatta 160  Q
    || ||||||||||||||||| ||||||||||||||||| ||||| |||||    
T  13720883 ttgtacatgattatgataataactaacccccttaccttagaagaagatta 13720834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 12 - 160
Target Start/End: Original strand, 16195432 - 16195581
Alignment:
Q  12 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaatatgc-aaaa 110  Q
    |||||||||||||| |  |||||| |||||||||| ||| ||||||||||||  |||||||||||||||||||||||||||||||||||| |||| ||||    
T  16195432 catcaattcatgcacaagaacatagcatcacagcacgagaacgaatttagcaacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaa 16195531  T
Q  111 ttatacatgattatgataatcactaacccccttacctttgaagatgatta 160  Q
    || ||||||||||||||||| | ||||||||||||||| |||||||||||    
T  16195532 ttgtacatgattatgataataattaacccccttaccttagaagatgatta 16195581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 12 - 215
Target Start/End: Complemental strand, 22088849 - 22088644
Alignment:
Q  12 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaatatgcaaa-a 110  Q
    |||||||||| ||| |  || ||| |||||||||||||||||||||||| ||  ||||||||| |||| ||||||||||||||||||||| ||||||| |    
T  22088849 catcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacacattttcatacaacatgagaaaatgcaaaga 22088750  T
Q  111 ttatacatgattatgataatcactaacccccttacctttgaagatgattatccttaatcctagcttcacttcagcctctaggtcaccc-acttgattcct 209  Q
    || |||||||||||||| || |||||||||||||||||||||| ||||||||  ||| ||| |||||| ||||||  ||||||||||| | ||||||||     
T  22088749 ttgtacatgattatgatgataactaacccccttacctttgaagttgattatctctaacccttgcttcaattcagctcctaggtcacccaaattgattccc 22088650  T
Q  210 caagct 215  Q
    ||||||    
T  22088649 caagct 22088644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 12 - 160
Target Start/End: Complemental strand, 16873106 - 16872957
Alignment:
Q  12 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaatatgc-aaaa 110  Q
    |||||||||||||| |  || ||||||| ||| ||||||||||||||||||   |||||||||||||||||||||||||||||||||||| |||| ||||    
T  16873106 catcaattcatgcacaagaaaataacattacaacaagagcacgaatttagccacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaa 16873007  T
Q  111 ttatacatgattatgataatcactaacccccttacctttgaagatgatta 160  Q
    || ||||||||||||||||| ||||||||||||||||| ||||| |||||    
T  16873006 ttgtacatgattatgataataactaacccccttaccttagaagaagatta 16872957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 37 - 160
Target Start/End: Complemental strand, 13662295 - 13662171
Alignment:
Q  37 catcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaatatgc-aaaattatacatgattatgataatcacta 135  Q
    |||||||||||||||||||||||||||  ||||||| |||||||||||||||||||||||||||| |||| |||||| ||||||||||||||||| ||||    
T  13662295 catcacagcaagagcacgaatttagcaacaattgtttatcaacccattttcatacaacatgagaaaatgcaaaaattgtacatgattatgataataacta 13662196  T
Q  136 acccccttacctttgaagatgatta 160  Q
    ||||||||||||| ||||| |||||    
T  13662195 acccccttaccttagaagaagatta 13662171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 63
Target Start/End: Complemental strand, 16405048 - 16404987
Alignment:
Q  2 atacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 63  Q
    |||||| || |||||||||||||||||||||||| ||||||||   ||||||||||||||||    
T  16405048 atacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagca 16404987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 59
Target Start/End: Original strand, 17345759 - 17345816
Alignment:
Q  2 atacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaattt 59  Q
    |||||| || |||||||||||||||| ||||||||||||||||  |||||||||||||    
T  17345759 atacaattatcatcaattcatgcatataaacataacatcacagttagagcacgaattt 17345816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 63
Target Start/End: Complemental strand, 16193789 - 16193728
Alignment:
Q  2 atacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 63  Q
    |||||| || |||||||||||||||||||||||| ||||| ||   ||||||||||||||||    
T  16193789 atacaattatcatcaattcatgcatacaaacatatcatcatagttggagcacgaatttagca 16193728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 63
Target Start/End: Complemental strand, 24928864 - 24928803
Alignment:
Q  2 atacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 63  Q
    |||||| || ||||||||||||||||||||||||  |||||||   ||||||||||||||||    
T  24928864 atacaattatcatcaattcatgcatacaaacatataatcacagttggagcacgaatttagca 24928803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 69
Target Start/End: Complemental strand, 43373531 - 43373474
Alignment:
Q  12 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaatt 69  Q
    ||||||||||||||||||||| || ||||||||   ||||||||||||||||| ||||    
T  43373531 catcaattcatgcatacaaacgtatcatcacagttggagcacgaatttagcattaatt 43373474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 63
Target Start/End: Original strand, 5238288 - 5238338
Alignment:
Q  13 atcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 63  Q
    ||||||||||||||||||||||| ||||| ||   ||||||||||||||||    
T  5238288 atcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 5238338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 63
Target Start/End: Complemental strand, 22907276 - 22907226
Alignment:
Q  13 atcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 63  Q
    ||||||||||||||||||||||| ||||| ||   ||||||||||||||||    
T  22907276 atcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 22907226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 63
Target Start/End: Complemental strand, 24661310 - 24661260
Alignment:
Q  13 atcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 63  Q
    ||||||||||||||||||||||| ||||| ||   ||||||||||||||||    
T  24661310 atcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 24661260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 63
Target Start/End: Original strand, 43685747 - 43685797
Alignment:
Q  13 atcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 63  Q
    ||||||||||||||||||||||| ||||| ||   ||||||||||||||||    
T  43685747 atcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 43685797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 163; Significance: 3e-87; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 2 - 215
Target Start/End: Original strand, 10989600 - 10989814
Alignment:
Q  2 atacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaa 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  10989600 atacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgatttgttcatcaacccattttcatacaacatgagaa 10989699  T
Q  102 tatgcaaaattatacatgattatgataatcactaacccccttacctttgaagatgattatccttaatcctagcttcacttcagcctctaggtcacc-cac 200  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| ||| ||| |||||| || |||  ||| |||||| |||    
T  10989700 tatgcaaaattatacatgattatgataatcactaacccccatacctttgaagttgattatccctaacccttgcttcaattaagctcctatgtcacctcac 10989799  T
Q  201 ttgattcctcaagct 215  Q
    |||||||||||||||    
T  10989800 ttgattcctcaagct 10989814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 2 - 215
Target Start/End: Complemental strand, 13911085 - 13910872
Alignment:
Q  2 atacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaa 101  Q
    |||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  13911085 atacaattaacatcaattcatgcatacaaacataacatcacaacaagagcacgaatttagcatgaattgttcatcaactcattttcatacaacatgagaa 13910986  T
Q  102 tatgcaaaattatacatgattatgataatcactaacccccttacctttgaagatgattatccttaatcctagcttcacttcagcctctaggtcacccact 201  Q
    |||||||||||| |||||||||||||||||| |||||||||||||||||||| ||||||||  ||| ||| |||||| ||||||  ||||||||||||||    
T  13910985 tatgcaaaattacacatgattatgataatcaataacccccttacctttgaagttgattatctctaacccttgcttcaattcagctcctaggtcacccact 13910886  T
Q  202 tgattcctcaagct 215  Q
    |||||||| |||||    
T  13910885 tgattcctaaagct 13910872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 2 - 215
Target Start/End: Complemental strand, 16479023 - 16478812
Alignment:
Q  2 atacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaa 101  Q
    |||||| || ||||||||||||||||||||||||||||| ||| |||||||||||| || ||||||||||||||||||||||||||||||||||||||||    
T  16479023 atacaattatcatcaattcatgcatacaaacataacatcgcagtaagagcacgaatctaacatgaattgttcatcaacccattttcatacaacatgagaa 16478924  T
Q  102 tatgcaaaattatacatgattatgataatcactaacccccttacctttgaagatgattatccttaatcctagcttcacttcagcctctaggtcacccact 201  Q
     |||||||||  || ||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||  ||||||||||||||    
T  16478923 aatgcaaaat--taaatgattatgataatcactaacccccttacctttgaagttgattatccttaaccctagcttcacttcagctcctaggtcacccact 16478826  T
Q  202 tgattcctcaagct 215  Q
    ||||||||||||||    
T  16478825 tgattcctcaagct 16478812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 2 - 215
Target Start/End: Original strand, 2437648 - 2437862
Alignment:
Q  2 atacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaa 101  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||| | |||||||||||||||||||||||    
T  2437648 atacaactaacatcaattcatgcatacaaacataacatcacaacaagagcacgaatttagcaagaattgttcattatcccattttcatacaacatgagaa 2437747  T
Q  102 tatgcaaaattatacatgattatgataatcactaacccccttacctttgaagatgattatccttaatcctagcttcacttcagcctctaggtca-cccac 200  Q
     |||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| | ||| ||| |||||| ||||||  |||||||| ||||     
T  2437748 aatgcaaaattgtacatgattatgataataactaacccccttacctttgaagatgattattcctaacccttgcttcaattcagctcctaggtcaccccaa 2437847  T
Q  201 ttgattcctcaagct 215  Q
    |||||||||||||||    
T  2437848 ttgattcctcaagct 2437862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 12 - 215
Target Start/End: Original strand, 13572877 - 13573079
Alignment:
Q  12 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaatatgcaaaat 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||| | ||||||||     
T  13572877 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaaaaa 13572976  T
Q  112 tatacatgattatgataatcactaacccccttacctttgaagatgattatccttaatcctagcttcacttcagcctctaggtcacccacttgattcctca 211  Q
    | ||||||||| ||||||| ||||||||||||||||| ||||| ||||| ||  ||  || |||||| ||||||  ||| |||||||||||||||||| |    
T  13572977 t-tacatgattgtgataataactaacccccttaccttagaagaagattaacccaaactcttgcttcaattcagctcctaagtcacccacttgattcctaa 13573075  T
Q  212 agct 215  Q
    ||||    
T  13573076 agct 13573079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 12 - 215
Target Start/End: Complemental strand, 18980076 - 18979872
Alignment:
Q  12 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaatatgc-aaaa 110  Q
    |||||||||||||| |  || ||| |||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||| |||| ||||    
T  18980076 catcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaa 18979977  T
Q  111 ttatacatgattatgataatcactaacccccttacctttgaagatgattatccttaatcctagcttcacttcagcctctaggtcacccacttgattcctc 210  Q
    || ||||||||||||||||| ||||||||||||||||| ||||| ||||| ||  ||  || |||||| ||||||  ||| ||||||||||||||||||     
T  18979976 ttgtacatgattatgataataactaacccccttaccttagaagaagattaacccaaactcttgcttcaattcagctcctaagtcacccacttgattccta 18979877  T
Q  211 aagct 215  Q
    |||||    
T  18979876 aagct 18979872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 12 - 215
Target Start/End: Original strand, 7822929 - 7823134
Alignment:
Q  12 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaatatgcaaa-a 110  Q
    |||||||||| ||| |  || ||| |||||||||||||||||||||||| ||  ||||||||| |||||||||||||||||||||||||| ||||||| |    
T  7822929 catcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgagaaaatgcaaaga 7823028  T
Q  111 ttatacatgattatgataatcactaacccccttacctttgaagatgattatccttaatcctagcttcacttcagcctctaggtcaccc-acttgattcct 209  Q
    || ||||||||||||||||| |||||||||||||||||||||| ||||||||  ||| ||| |||||| ||||||  ||||||||||| | |||||||||    
T  7823029 ttgtacatgattatgataataactaacccccttacctttgaagttgattatctctaacccttgcttcaattcagctcctaggtcacccaaattgattcct 7823128  T
Q  210 caagct 215  Q
    ||||||    
T  7823129 caagct 7823134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 12 - 215
Target Start/End: Original strand, 7830240 - 7830445
Alignment:
Q  12 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaatatgcaaa-a 110  Q
    |||||||||| ||| |  || ||| |||||||||||||||||||||||| ||  ||||||||| |||||||||||||||||||||||||| ||||||| |    
T  7830240 catcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgagaaaatgcaaaga 7830339  T
Q  111 ttatacatgattatgataatcactaacccccttacctttgaagatgattatccttaatcctagcttcacttcagcctctaggtcaccc-acttgattcct 209  Q
    || ||||||||||||||||| |||||||||||||||||||||| ||||||||  ||| ||| |||||| ||||||  ||||||||||| | |||||||||    
T  7830340 ttgtacatgattatgataataactaacccccttacctttgaagttgattatctctaacccttgcttcaattcagctcctaggtcacccaaattgattcct 7830439  T
Q  210 caagct 215  Q
    ||||||    
T  7830440 caagct 7830445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 12 - 215
Target Start/End: Original strand, 27176634 - 27176839
Alignment:
Q  12 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaatatgcaaa-a 110  Q
    |||||||||| ||| |  || ||| |||||||||||||||||||||||| ||  ||||||||| |||||||||||||||||||||||||| ||||||| |    
T  27176634 catcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgagaaaatgcaaaga 27176733  T
Q  111 ttatacatgattatgataatcactaacccccttacctttgaagatgattatccttaatcctagcttcacttcagcctctaggtcaccc-acttgattcct 209  Q
    || ||||||||||||||||| |||||||||||||||||||||| ||||||||  ||| ||| |||||| ||||||  ||||||||||| | |||||||||    
T  27176734 ttgtacatgattatgataataactaacccccttacctttgaagttgattatctctaacccttgcttcaattcagctcctaggtcacccaaattgattcct 27176833  T
Q  210 caagct 215  Q
    ||||||    
T  27176834 caagct 27176839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 12 - 160
Target Start/End: Complemental strand, 15950846 - 15950697
Alignment:
Q  12 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaatatgc-aaaa 110  Q
    |||||||||||||| |  || ||| |||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||| |||| ||||    
T  15950846 catcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaa 15950747  T
Q  111 ttatacatgattatgataatcactaacccccttacctttgaagatgatta 160  Q
    || ||||||||||||||||| ||||||||||||||||||||||| |||||    
T  15950746 ttgtacatgattatgataataactaacccccttacctttgaagaagatta 15950697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 12 - 215
Target Start/End: Complemental strand, 27101692 - 27101487
Alignment:
Q  12 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaatatgcaaa-a 110  Q
    |||||||||| ||| |  || ||| |||||||||||||||||||||||| ||  ||||||||| |||||||||||||||||||||||||| ||||||| |    
T  27101692 catcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgagaaaatgcaaaga 27101593  T
Q  111 ttatacatgattatgataatcactaacccccttacctttgaagatgattatccttaatcctagcttcacttcagcctctaggtcaccc-acttgattcct 209  Q
    || ||||||||||||||||| |||||||||||||||||||||| ||||||||  ||| ||| |||||| ||||||  ||||||||||| | ||||||||     
T  27101592 ttgtacatgattatgataataactaacccccttacctttgaagttgattatctctaacccttgcttcaattcagctcctaggtcacccaaattgattccc 27101493  T
Q  210 caagct 215  Q
    ||||||    
T  27101492 caagct 27101487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 12 - 215
Target Start/End: Complemental strand, 27109040 - 27108835
Alignment:
Q  12 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaatatgcaaa-a 110  Q
    |||||||||| ||| |  || ||| |||||||||||||||||||||||| ||  ||||||||| |||||||||||||||||||||||||| ||||||| |    
T  27109040 catcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgagaaaatgcaaaga 27108941  T
Q  111 ttatacatgattatgataatcactaacccccttacctttgaagatgattatccttaatcctagcttcacttcagcctctaggtcaccc-acttgattcct 209  Q
    || ||||||||||||||||| |||||||||||||||||||||| ||||||||  ||| ||| |||||| ||||||  ||||||||||| | ||||||||     
T  27108940 ttgtacatgattatgataataactaacccccttacctttgaagttgattatctctaacccttgcttcaattcagctcctaggtcacccaaattgattccc 27108841  T
Q  210 caagct 215  Q
    ||||||    
T  27108840 caagct 27108835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 12 - 215
Target Start/End: Complemental strand, 38783784 - 38783579
Alignment:
Q  12 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaatatgcaaa-a 110  Q
    |||||||||| ||| |  || ||| |||||||||||||||||||||||| ||  ||||||||| |||||||||||||||||||||||||| ||||||| |    
T  38783784 catcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgagaaaatgcaaaga 38783685  T
Q  111 ttatacatgattatgataatcactaacccccttacctttgaagatgattatccttaatcctagcttcacttcagcctctaggtcaccc-acttgattcct 209  Q
    || ||||||||||||||||| |||||||||||||||||||||| ||||||||  ||| ||| |||||| ||||||  ||||||||||| | ||||||||     
T  38783684 ttgtacatgattatgataataactaacccccttacctttgaagttgattatctctaacccttgcttcaattcagctcctaggtcacccaaattgattccc 38783585  T
Q  210 caagct 215  Q
    ||||||    
T  38783584 caagct 38783579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 12 - 215
Target Start/End: Original strand, 15927769 - 15927973
Alignment:
Q  12 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaatatgc-aaaa 110  Q
    |||||||||||||| |  || ||| ||||||| |||||||||||||||||||  ||||| ||||||| |||||||||||||||||||||| |||| ||||    
T  15927769 catcaattcatgcacaagaaaatagcatcacaacaagagcacgaatttagcaacaattgatcatcaatccattttcatacaacatgagaaaatgcaaaaa 15927868  T
Q  111 ttatacatgattatgataatcactaacccccttacctttgaagatgattatccttaatcctagcttcacttcagcctctaggtcacccacttgattcctc 210  Q
    || ||||||||||||||||| ||||||||||||||||| ||||| ||||| ||  ||  || |||||| ||||||  ||| ||||||||||||||||||     
T  15927869 ttgtacatgattatgataataactaacccccttaccttagaagaagattaacccaaactcttgcttcaattcagctcctaagtcacccacttgattccta 15927968  T
Q  211 aagct 215  Q
    |||||    
T  15927969 aagct 15927973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 12 - 160
Target Start/End: Original strand, 13758571 - 13758720
Alignment:
Q  12 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaatatgc-aaaa 110  Q
    |||||||||||||| |  || ||||||| ||| ||||||||||||||||||   |||||||||||||||||||||||||||||||||||| |||| ||||    
T  13758571 catcaattcatgcacaagaaaataacattacaacaagagcacgaatttagccacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaa 13758670  T
Q  111 ttatacatgattatgataatcactaacccccttacctttgaagatgatta 160  Q
    || ||||||||||||||||| ||||||||||||||||| ||||| |||||    
T  13758671 ttgtacatgattatgataataactaacccccttaccttagaagaagatta 13758720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 12 - 160
Target Start/End: Complemental strand, 15760169 - 15760020
Alignment:
Q  12 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaatatgc-aaaa 110  Q
    |||||||||||||| |  || ||| |||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||| |||| ||||    
T  15760169 catcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaataattgttcatcaacccattttcatacaacatgagaaaatgcaaaaa 15760070  T
Q  111 ttatacatgattatgataatcactaacccccttacctttgaagatgatta 160  Q
    ||  ||||||||||||| || ||||||||||||||||| ||||| |||||    
T  15760069 ttgaacatgattatgatgataactaacccccttaccttagaagaagatta 15760020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 2 - 148
Target Start/End: Complemental strand, 18253908 - 18253761
Alignment:
Q  2 atacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaa 101  Q
    |||||| || |||||||||||||||||||||||| ||| ||||   |||||||||||||| |  ||||||||||||||||||||||||||||||||||||    
T  18253908 atacaattatcatcaattcatgcatacaaacatatcattacagttggagcacgaatttagtaacaattgttcatcaacccattttcatacaacatgagaa 18253809  T
Q  102 tatgc-aaaattatacatgattatgataatcactaacccccttacctt 148  Q
     |||| ||||||  |||||||||| || || |||||||||||||||||    
T  18253808 aatgcaaaaattgaacatgattataatgataactaacccccttacctt 18253761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 66 - 148
Target Start/End: Original strand, 15862174 - 15862257
Alignment:
Q  66 aattgttcatcaacccattttcatacaacatgagaatatgc-aaaattatacatgattatgataatcactaacccccttacctt 148  Q
    |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| |||||||||||||||||    
T  15862174 aattgttcatcaacccattttcatacaacatgagaaaatgcaaaaattatacatgattatgataataactaacccccttacctt 15862257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 12 - 154
Target Start/End: Complemental strand, 14250953 - 14250810
Alignment:
Q  12 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaatatgc-aaaa 110  Q
    |||||||||||||| |  || ||| ||| ||| |||||||||||||||| ||  |||||||||||||||||||||||||||||||||||| |||| ||||    
T  14250953 catcaattcatgcacaagaaaatagcattacaacaagagcacgaatttaacaacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaa 14250854  T
Q  111 ttatacatgattatgataatcactaacccccttacctttgaaga 154  Q
     |  ||||||||| ||| || ||||||||||||||||| |||||    
T  14250853 atgaacatgattacgatgataactaacccccttaccttagaaga 14250810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 12 - 110
Target Start/End: Complemental strand, 48622721 - 48622623
Alignment:
Q  12 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaatatgcaaaa 110  Q
    |||||||||||||| |  || ||| |||||||| ||||||||||||||||||| |||||||||||||||||||||| || |||||||||| ||||||||    
T  48622721 catcaattcatgcacaagaaaatatcatcacagtaagagcacgaatttagcatcaattgttcatcaacccattttcgtaaaacatgagaaaatgcaaaa 48622623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 45 - 148
Target Start/End: Original strand, 16418731 - 16418835
Alignment:
Q  45 caagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaatatgcaaaattataca-tgattatgataatcactaaccccctt 143  Q
    |||||||||||||||  |||||||||||||||||||||||||||||||||||||||| ||| ||||||  | | |||||||||| |  || |||||||||    
T  16418731 caagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagaagatgtaaaatttgaaattgattatgatgaaaacaaaccccctt 16418830  T
Q  144 acctt 148  Q
    |||||    
T  16418831 acctt 16418835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 45 - 148
Target Start/End: Complemental strand, 10000392 - 10000288
Alignment:
Q  45 caagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaatatgcaaaattataca-tgattatgataatcactaaccccctt 143  Q
    |||||||||||||||  ||| ||||||||||||||||||||| |||||||||||||| ||||||||||  | | |||||||||| |  || |||||||||    
T  10000392 caagagcacgaatttgacataaattgttcatcaacccatttttatacaacatgagaagatgcaaaatttgaaattgattatgatgaagacaaaccccctt 10000293  T
Q  144 acctt 148  Q
    |||||    
T  10000292 acctt 10000288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 2 - 63
Target Start/End: Original strand, 13321206 - 13321267
Alignment:
Q  2 atacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 63  Q
    |||||| || |||||||||||||||||||||||||||||||||  |||||||||||||||||    
T  13321206 atacaattatcatcaattcatgcatacaaacataacatcacagttagagcacgaatttagca 13321267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 2 - 63
Target Start/End: Complemental strand, 47481104 - 47481043
Alignment:
Q  2 atacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 63  Q
    |||||| || |||||||||||||||||||||||||||||||||  |||||||||||||||||    
T  47481104 atacaattatcatcaattcatgcatacaaacataacatcacagttagagcacgaatttagca 47481043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 63
Target Start/End: Complemental strand, 13037087 - 13037026
Alignment:
Q  2 atacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 63  Q
    |||||| || |||||||||||||||||||||||| ||||||||   ||||||||||||||||    
T  13037087 atacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagca 13037026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 16211957 - 16212017
Alignment:
Q  3 tacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 63  Q
    ||||| || |||||||||||||||||||||||| ||||||||   ||||||||||||||||    
T  16211957 tacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagca 16212017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 63
Target Start/End: Complemental strand, 11580812 - 11580751
Alignment:
Q  2 atacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 63  Q
    |||||| || ||||||||||||||||||||||||  |||||||   ||||||||||||||||    
T  11580812 atacaattatcatcaattcatgcatacaaacatattatcacagttggagcacgaatttagca 11580751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 117 - 185
Target Start/End: Complemental strand, 15516793 - 15516725
Alignment:
Q  117 atgattatgataatcactaacccccttacctttgaagatgattatccttaatcctagcttcacttcagc 185  Q
    |||||||||||||  |||||||||||||| |||||||||||||| || |||  || |||||| ||||||    
T  15516793 atgattatgataaagactaacccccttacatttgaagatgattaaccctaactcttgcttcaattcagc 15516725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 63
Target Start/End: Original strand, 11516428 - 11516478
Alignment:
Q  13 atcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 63  Q
    ||||||||||||||||||||||| ||||| ||   ||||||||||||||||    
T  11516428 atcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 11516478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 63
Target Start/End: Complemental strand, 15441626 - 15441576
Alignment:
Q  13 atcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 63  Q
    ||||||||||||||||||||||| ||||| ||   ||||||||||||||||    
T  15441626 atcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 15441576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 63
Target Start/End: Complemental strand, 30262191 - 30262141
Alignment:
Q  13 atcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 63  Q
    ||||||||||||||||||||||| ||||| ||   ||||||||||||||||    
T  30262191 atcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 30262141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 158; Significance: 3e-84; HSPs: 4)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 2 - 215
Target Start/End: Original strand, 36284 - 36497
Alignment:
Q  2 atacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaa 101  Q
    ||||||||||||||||||||| |||||||||||||||||||  |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  36284 atacaactaacatcaattcatacatacaaacataacatcactacaagagcacgaatttagcatgaattgttcatcaacccagtttcatacaacatgagaa 36383  T
Q  102 tatgcaaaattatacatgattatgataatcactaacccccttacctttgaagatgattatccttaatcctagcttcacttcagcctctaggtcacccact 201  Q
    |||||||||||| |||||||||||||||||| |||||||||||||||||||| ||||||||| ||| ||| |||||| ||||||  ||||||||||||||    
T  36384 tatgcaaaattacacatgattatgataatcattaacccccttacctttgaagttgattatccctaacccttgcttcaattcagctcctaggtcacccact 36483  T
Q  202 tgattcctcaagct 215  Q
    |||||||| |||||    
T  36484 tgattcctaaagct 36497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 24 - 215
Target Start/End: Complemental strand, 169951 - 169759
Alignment:
Q  24 catacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaatatgcaaaattatacatgatta 123  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  169951 catacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaaaatgcaaaattatacatgatta 169852  T
Q  124 tgataatcactaacccccttacctttgaagatgattatccttaatcctagcttcacttcagcctctaggtca-cccacttgattcctcaagct 215  Q
    |||||||||||||||||||||| ||||||||||||||||  ||| ||| |||||| ||||||   || |||| ||||||||||||||||||||    
T  169851 tgataatcactaacccccttacttttgaagatgattatcactaacccttgcttcaattcagctcttatgtcaccccacttgattcctcaagct 169759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 12 - 160
Target Start/End: Complemental strand, 154062 - 153913
Alignment:
Q  12 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaatatgc-aaaa 110  Q
    |||||||||||||| |  || ||| |||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||| |||| ||||    
T  154062 catcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaa 153963  T
Q  111 ttatacatgattatgataatcactaacccccttacctttgaagatgatta 160  Q
    || ||||||||||||||||| ||||||||||||||||| ||||| |||||    
T  153962 ttgtacatgattatgataataactaacccccttaccttagaagaagatta 153913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 63
Target Start/End: Original strand, 48788 - 48849
Alignment:
Q  2 atacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 63  Q
    |||||| || |||||||||||||||||||||||| ||||||||   ||||||||||||||||    
T  48788 atacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagca 48849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420 (Bit Score: 155; Significance: 2e-82; HSPs: 1)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 2 - 215
Target Start/End: Complemental strand, 13386 - 13175
Alignment:
Q  2 atacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaa 101  Q
    |||||| || ||||||||||||||||||||||||||||||||  |||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  13386 atacaattatcatcaattcatgcatacaaacataacatcacactaagagcacgaatctagcatgaattgttcatcaacccattttcatacaacatgagaa 13287  T
Q  102 tatgcaaaattatacatgattatgataatcactaacccccttacctttgaagatgattatccttaatcctagcttcacttcagcctctaggtcacccact 201  Q
     ||| |||||  |||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||   ||||||||||||||    
T  13286 aatgaaaaat--tacatgattatgataatcactaacccccttacctttgaagttgattatccttaaccctagcttcacttcagttcctaggtcacccact 13189  T
Q  202 tgattcctcaagct 215  Q
    ||||||||||||||    
T  13188 tgattcctcaagct 13175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 155; Significance: 2e-82; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 27654045 - 27653831
Alignment:
Q  1 tatacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  27654045 tatacaactaacatcaattcatgcatacaagcataacatcacagcaagagcacgaatttagcatgatttgttcatcaatccattttcatacaacatgaga 27653946  T
Q  101 atatgcaaaattatacatgattatgataatcactaacccccttacctttgaagatgattatccttaatcctagcttcacttcagcctctaggtcacccac 200  Q
    | ||||||||||| |||||||||||||||||||||||||||| |||||||||| ||||||||  ||| ||| |||||| ||||||  |||||||||||||    
T  27653945 aaatgcaaaattacacatgattatgataatcactaaccccctcacctttgaagttgattatctctaacccttgcttcaattcagctcctaggtcacccac 27653846  T
Q  201 ttgattcctcaagct 215  Q
    ||||||||| |||||    
T  27653845 ttgattcctaaagct 27653831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 25175753 - 25175961
Alignment:
Q  1 tatacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgag- 99  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||     
T  25175753 tatacaactaacatcaattcatgcatacaaacataacaacacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgaga 25175852  T
Q  100 aatatgcaaaattatacatgattatgataatcactaacccccttacctttgaagatgattatc-cttaatcctagcttcacttcagcctctaggtcaccc 198  Q
    || ||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||| || |  ||| |||||| ||||||  ||| |||||||    
T  25175853 aaaatgcaaaattatacatgattatggtaatcactaacccccttacctttgaagttgattatctctaaccccttgcttcaattcagctccta-gtcaccc 25175951  T
Q  199 acttgattcc 208  Q
    ||||||||||    
T  25175952 acttgattcc 25175961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 3 - 137
Target Start/End: Complemental strand, 16825812 - 16825678
Alignment:
Q  3 tacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaat 102  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  16825812 tacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaaa 16825713  T
Q  103 atgcaaaattatacatgattatgataatcactaac 137  Q
    ||||||||||| |||||||||||||||||||||||    
T  16825712 atgcaaaattacacatgattatgataatcactaac 16825678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 12 - 215
Target Start/End: Complemental strand, 22251621 - 22251416
Alignment:
Q  12 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaatatgcaaa-a 110  Q
    |||||||||||||| |  || ||| |||||||||||||||||||||||| ||  |||||||||||||||||||||||||||||||||||| ||||||| |    
T  22251621 catcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaga 22251522  T
Q  111 ttatacatgattatgataatcactaacccccttacctttgaagatgattatccttaatcctagcttcacttcagcctctaggtcaccc-acttgattcct 209  Q
    || ||||||||||||||||| |||||||||| ||||||||||||||||||| | ||| ||| |||||| ||||||  ||||||||||| | |||||||||    
T  22251521 ttgtacatgattatgataataactaacccccatacctttgaagatgattattcctaacccttgcttcaattcagctcctaggtcacccaaattgattcct 22251422  T
Q  210 caagct 215  Q
    ||||||    
T  22251421 caagct 22251416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 12 - 215
Target Start/End: Complemental strand, 22225793 - 22225588
Alignment:
Q  12 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaatatgcaaa-a 110  Q
    |||||||||||||| |  || ||| |||||||| ||||||||||||||| ||  |||||||||||||||||||||||||||||||||||| ||||||| |    
T  22225793 catcaattcatgcacaagaaaatagcatcacagaaagagcacgaatttaacaacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaga 22225694  T
Q  111 ttatacatgattatgataatcactaacccccttacctttgaagatgattatccttaatcctagcttcacttcagcctctaggtcaccc-acttgattcct 209  Q
    || ||||||||||||||||| |||||||||| ||||||||||||||||||| | ||| ||| |||||| ||||||  ||||||||||| | |||||||||    
T  22225693 ttgtacatgattatgataataactaacccccatacctttgaagatgattattcctaacccttgcttcaattcagctcctaggtcacccaaattgattcct 22225594  T
Q  210 caagct 215  Q
    ||||||    
T  22225593 caagct 22225588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 12 - 215
Target Start/End: Original strand, 16232093 - 16232297
Alignment:
Q  12 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaatatgc-aaaa 110  Q
    |||||||||||||| |  || ||| |||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||| |||| ||||    
T  16232093 catcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaa 16232192  T
Q  111 ttatacatgattatgataatcactaacccccttacctttgaagatgattatccttaatcctagcttcacttcagcctctaggtcacccacttgattcctc 210  Q
    || ||||||||||||||||| ||||||||||||||||| ||||| ||||| ||  ||  || |||||| ||||||  ||| ||||||||||||||||||     
T  16232193 ttgtacatgattatgataataactaacccccttaccttagaagaagattaacccaaactcttgcttcaattcagctcctaagtcacccacttgattccta 16232292  T
Q  211 aagct 215  Q
    |||||    
T  16232293 aagct 16232297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 2 - 148
Target Start/End: Complemental strand, 1650166 - 1650022
Alignment:
Q  2 atacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaa 101  Q
    |||||| || ||||||||||||||||||||| ||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  1650166 atacaattatcatcaattcatgcatacaaacgtaacatcacagtaagagcacgaatctagcatgaattgttcatcaacccattttcatacaacatgagaa 1650067  T
Q  102 tatgcaaaattatacatgattatgataatcactaacccccttacctt 148  Q
     |||||||||  ||||||||||||||||  |||||||||||||||||    
T  1650066 aatgcaaaat--tacatgattatgataaagactaacccccttacctt 1650022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 12 - 215
Target Start/End: Complemental strand, 16376428 - 16376223
Alignment:
Q  12 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaatatgcaaa-a 110  Q
    |||||||||| ||| |  || ||| |||||||||||||||||||||||| ||  ||||||||| |||||||||||||||||||||||||| ||||||| |    
T  16376428 catcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgagaaaatgcaaaga 16376329  T
Q  111 ttatacatgattatgataatcactaacccccttacctttgaagatgattatccttaatcctagcttcacttcagcctctaggtcaccc-acttgattcct 209  Q
    || ||||||||||||||||| |||||||||||||||||||||| ||||||||  ||| ||| |||||| ||||||  ||||||||||| | |||||||||    
T  16376328 ttgtacatgattatgataataactaacccccttacctttgaagttgattatctctaacccttgcttcaattcagctcctaggtcacccaaattgattcct 16376229  T
Q  210 caagct 215  Q
    ||||||    
T  16376228 caagct 16376223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 12 - 215
Target Start/End: Complemental strand, 16383752 - 16383547
Alignment:
Q  12 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaatatgcaaa-a 110  Q
    |||||||||| ||| |  || ||| |||||||||||||||||||||||| ||  ||||||||| |||||||||||||||||||||||||| ||||||| |    
T  16383752 catcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgagaaaatgcaaaga 16383653  T
Q  111 ttatacatgattatgataatcactaacccccttacctttgaagatgattatccttaatcctagcttcacttcagcctctaggtcaccc-acttgattcct 209  Q
    || ||||||||||||||||| |||||||||||||||||||||| ||||||||  ||| ||| |||||| ||||||  ||||||||||| | |||||||||    
T  16383652 ttgtacatgattatgataataactaacccccttacctttgaagttgattatctctaacccttgcttcaattcagctcctaggtcacccaaattgattcct 16383553  T
Q  210 caagct 215  Q
    ||||||    
T  16383552 caagct 16383547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 12 - 215
Target Start/End: Original strand, 10488900 - 10489105
Alignment:
Q  12 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaatatgcaaa-a 110  Q
    |||||||||| ||| |  || ||| |||||||||||||||||||||||| ||  ||||||||| |||||||||||||||||||||||||| ||||||| |    
T  10488900 catcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgagaaaatgcaaaga 10488999  T
Q  111 ttatacatgattatgataatcactaacccccttacctttgaagatgattatccttaatcctagcttcacttcagcctctaggtcaccc-acttgattcct 209  Q
    || ||||||||||||||||| |||||||||||||||||||||| ||||||||  ||| ||| |||||| ||||||  ||||||||||| | ||||||||     
T  10489000 ttgtacatgattatgataataactaacccccttacctttgaagttgattatctctaacccttgcttcaattcagctcctaggtcacccaaattgattccc 10489099  T
Q  210 caagct 215  Q
    ||||||    
T  10489100 caagct 10489105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 12 - 215
Target Start/End: Complemental strand, 16556194 - 16555989
Alignment:
Q  12 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaatatgcaaa-a 110  Q
    |||||||||| ||| |  || ||| |||||||||| ||||||||||||| ||  ||||||||| |||||||||||||||||||||||||| ||||||| |    
T  16556194 catcaattcaagcacaagaaaatagcatcacagcaggagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgagaaaatgcaaaga 16556095  T
Q  111 ttatacatgattatgataatcactaacccccttacctttgaagatgattatccttaatcctagcttcacttcagcctctaggtcaccc-acttgattcct 209  Q
    || ||||||||||||||||| |||||||||||||||||||||| ||||||||  ||| ||| |||||| ||||||  ||||||||||| | ||||||||     
T  16556094 ttgtacatgattatgataataactaacccccttacctttgaagttgattatctctaacccttgcttcaattcagctcctaggtcacccaaattgattccc 16555995  T
Q  210 caagct 215  Q
    ||||||    
T  16555994 caagct 16555989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 12 - 215
Target Start/End: Complemental strand, 16632750 - 16632545
Alignment:
Q  12 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaatatgcaaa-a 110  Q
    |||||||||| ||| |  || ||| |||||||||| ||||||||||||| ||  ||||||||| |||||||||||||||||||||||||| ||||||| |    
T  16632750 catcaattcaagcacaagaaaatagcatcacagcaggagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgagaaaatgcaaaga 16632651  T
Q  111 ttatacatgattatgataatcactaacccccttacctttgaagatgattatccttaatcctagcttcacttcagcctctaggtcaccc-acttgattcct 209  Q
    || ||||||||||||||||| |||||||||||||||||||||| ||||||||  ||| ||| |||||| ||||||  ||||||||||| | ||||||||     
T  16632650 ttgtacatgattatgataataactaacccccttacctttgaagttgattatctctaacccttgcttcaattcagctcctaggtcacccaaattgattccc 16632551  T
Q  210 caagct 215  Q
    ||||||    
T  16632550 caagct 16632545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 12 - 215
Target Start/End: Complemental strand, 18086878 - 18086674
Alignment:
Q  12 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaatatgc-aaaa 110  Q
    |||||||||||||| |  || ||| ||||||| |||||||||||||||||||  |||||||||||||||||||||||||||||||||||| |||| ||||    
T  18086878 catcaattcatgcacaagaaaatagcatcacaacaagagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaa 18086779  T
Q  111 ttatacatgattatgataatcactaacccccttacctttgaagatgattatccttaatcctagcttcacttcagcctctaggtcacccacttgattcctc 210  Q
    || |||||||||||  |||| ||||||||||||||||| ||||| ||||| ||  ||  || |||||| ||||||  ||| ||||||||||||||| ||     
T  18086778 ttgtacatgattatactaataactaacccccttaccttagaagaagattaacccaaactcttgcttcaattcagctcctaagtcacccacttgatttcta 18086679  T
Q  211 aagct 215  Q
    |||||    
T  18086678 aagct 18086674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 41 - 199
Target Start/End: Original strand, 19299467 - 19299626
Alignment:
Q  41 acagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaatatgcaaa-attatacatgattatgataatcactaaccc 139  Q
    |||||||||||||||||||| ||  |||||| ||||||||||||||||||||||||||||| ||||||| ||| ||||||||||||||||| ||||||||    
T  19299467 acagcaagagcacgaatttaacaacaattgtccatcaacccattttcatacaacatgagaaaatgcaaagattgtacatgattatgataataactaaccc 19299566  T
Q  140 ccttacctttgaagatgattatccttaatcctagcttcacttcagcctctaggtcaccca 199  Q
    |||||||||||||| ||||||||  ||| ||| |||||| ||||||  ||||||| ||||    
T  19299567 ccttacctttgaagttgattatctctaacccttgcttcaattcagctcctaggtcgccca 19299626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 12 - 160
Target Start/End: Original strand, 1556206 - 1556355
Alignment:
Q  12 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaatatgc-aaaa 110  Q
    |||||||||||||| |  || ||| |||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||| |||| ||||    
T  1556206 catcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaa 1556305  T
Q  111 ttatacatgattatgataatcactaacccccttacctttgaagatgatta 160  Q
    ||  ||||||||||||| || ||||||||||||||||| ||||| |||||    
T  1556306 ttgaacatgattatgatgataactaacccccttaccttagaagaagatta 1556355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 12 - 160
Target Start/End: Original strand, 19610219 - 19610368
Alignment:
Q  12 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaatatgc-aaaa 110  Q
    |||| ||||||||| |  || ||| |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| |||| |||| ||||    
T  19610219 catcgattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaataattgttcatcaacccattttcatacaacatcagaaaatgcaaaaa 19610318  T
Q  111 ttatacatgattatgataatcactaacccccttacctttgaagatgatta 160  Q
    || ||||||||||||||||| ||||||||||||||||| ||||| |||||    
T  19610319 ttgtacatgattatgataataactaacccccttaccttagaagaagatta 19610368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 2 - 215
Target Start/End: Complemental strand, 14626191 - 14625978
Alignment:
Q  2 atacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacat--gag 99  Q
    |||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||  |||| | ||| | | || || || |||||||  |||    
T  14626191 atacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcaataattatccataatcacaatt-caaacaacatttgag 14626093  T
Q  100 aatatgcaaaattatacatgattatgataatcactaacccccttacctttgaagatgattatccttaatcctagcttcacttcagcctctaggtcaccca 199  Q
    ||| || ||| | | | |||||| ||||||| |||||||||||||||||||||| ||||||||  ||| ||| |||||| ||||||  ||||||||||||    
T  14626092 aatttgtaaagtga-agatgattgtgataataactaacccccttacctttgaagttgattatctctaacccttgcttcaattcagctcctaggtcaccca 14625994  T
Q  200 cttgattcctcaagct 215  Q
    ||||||||||||||||    
T  14625993 cttgattcctcaagct 14625978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 12 - 160
Target Start/End: Original strand, 23977970 - 23978119
Alignment:
Q  12 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaatatgc-aaaa 110  Q
    |||||||||||||| |  || ||||||| ||| ||||||||||||||||||   |||||||||||||||||||||||||||||||||||| |||| ||||    
T  23977970 catcaattcatgcacaagaaaataacattacaacaagagcacgaatttagccacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaa 23978069  T
Q  111 ttatacatgattatgataatcactaacccccttacctttgaagatgatta 160  Q
    || ||||||||||||||||| |||||| |||||||||| ||||| |||||    
T  23978070 ttgtacatgattatgataataactaacgcccttaccttagaagaagatta 23978119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 45 - 215
Target Start/End: Complemental strand, 29869798 - 29869627
Alignment:
Q  45 caagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaatatgcaaaattataca-tgattatgataatcactaaccccctt 143  Q
    |||||||||||||||  |||||||||||||||||||||||||||||||||||||||| ||| |||||| || | ||||||||||||| ||||||||||||    
T  29869798 caagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagaagatgtaaaattttaaattgattatgataataactaaccccctt 29869699  T
Q  144 acctttgaagatgattatccttaatcctagcttcacttcagcctctaggtcacccacttgattcctcaagct 215  Q
    ||||| ||||| ||| | ||  ||  || |||||| ||||||  ||| |||||||||||||||||| |||||    
T  29869698 accttagaagaagatcaacccaaactcttgcttcaattcagctcctaagtcacccacttgattcctaaagct 29869627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 12 - 148
Target Start/End: Complemental strand, 13620849 - 13620712
Alignment:
Q  12 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaatatgc-aaaa 110  Q
    |||||||||||||| |  || ||| ||| ||| |||||||||||||||||||  |||||||||||||||||||||||||||||||||||| |||| ||||    
T  13620849 catcaattcatgcacaagaaaatagcattacaacaagagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaa 13620750  T
Q  111 ttatacatgattatgataatcactaacccccttacctt 148  Q
    || |||||||||||||  |  |||||||||||||||||    
T  13620749 ttgtacatgattatgaagaagactaacccccttacctt 13620712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 2 - 144
Target Start/End: Original strand, 29666064 - 29666208
Alignment:
Q  2 atacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaac-atgaga 100  Q
    |||||| || ||||||||||| ||||  || ||||||||||||| |||||||||||||| ||  |||| | ||||| |||||||||||||||| ||||||    
T  29666064 atacaattatcatcaattcatacataagaaaataacatcacagctagagcacgaatttaacaacaattatccatcaccccattttcatacaacaatgaga 29666163  T
Q  101 atatgcaa-aattatacatgattatgataatcactaaccccctta 144  Q
    |  ||||| ||||  ||||||||||||| |  |||||||| ||||    
T  29666164 aattgcaataattgaacatgattatgatgaagactaacccactta 29666208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 2 - 61
Target Start/End: Original strand, 15862661 - 15862720
Alignment:
Q  2 atacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttag 61  Q
    |||||| || |||||||||||||||||||||||||||||||||  |||||||||||||||    
T  15862661 atacaattatcatcaattcatgcatacaaacataacatcacagttagagcacgaatttag 15862720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 2 - 63
Target Start/End: Complemental strand, 1657821 - 1657760
Alignment:
Q  2 atacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 63  Q
    |||||| || ||||||||||||||| |||||||||||||||||  |||||||||||||||||    
T  1657821 atacaattatcatcaattcatgcatccaaacataacatcacagttagagcacgaatttagca 1657760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 2 - 63
Target Start/End: Complemental strand, 35009512 - 35009451
Alignment:
Q  2 atacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 63  Q
    |||||| || ||||||||||||||||||||| |||||||||||  |||||||||||||||||    
T  35009512 atacaattatcatcaattcatgcatacaaacttaacatcacagttagagcacgaatttagca 35009451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 12 - 62
Target Start/End: Original strand, 27751625 - 27751675
Alignment:
Q  12 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagc 62  Q
    ||||||||||||||||||||||||||||||||   ||||||||||||||||    
T  27751625 catcaattcatgcatacaaacataacatcacaattagagcacgaatttagc 27751675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 117 - 161
Target Start/End: Original strand, 4991396 - 4991440
Alignment:
Q  117 atgattatgataatcactaacccccttacctttgaagatgattat 161  Q
    |||||||||||||  ||||||||||||||||||||||||||||||    
T  4991396 atgattatgataaagactaacccccttacctttgaagatgattat 4991440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 61
Target Start/End: Original strand, 23153637 - 23153696
Alignment:
Q  2 atacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttag 61  Q
    |||||| || |||||||||||||||||||||||| ||||||||   ||||||||||||||    
T  23153637 atacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttag 23153696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 131 - 215
Target Start/End: Complemental strand, 16814931 - 16814846
Alignment:
Q  131 cactaacccccttacctttgaagatgattatccttaatcctagcttcacttcagcctctaggtca-cccacttgattcctcaagct 215  Q
    ||||||||| ||||||||||||| ||||||||  ||| ||| |||||| ||||||  |||||||| ||||||||||| || |||||    
T  16814931 cactaaccctcttacctttgaagttgattatctctaacccttgcttcaattcagctcctaggtcaccccacttgattgctaaagct 16814846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 154; Significance: 7e-82; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 154; E-Value: 7e-82
Query Start/End: Original strand, 2 - 215
Target Start/End: Complemental strand, 31736 - 31523
Alignment:
Q  2 atacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaa 101  Q
    ||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  31736 atacaactaacatcaattcatgcattcaaacataacatcaccacaagagcacgaatttagcatgaattgttcatcaactcattttcatacaacatgagaa 31637  T
Q  102 tatgcaaaattatacatgattatgataatcactaacccccttacctttgaagatgattatccttaatcctagcttcacttcagcctctaggtcacccact 201  Q
    |||||||||||| ||||||||||||||||||||||||||||||| ||||||| ||||||||  ||| ||| |||||| ||||||  ||||||||||||||    
T  31636 tatgcaaaattacacatgattatgataatcactaacccccttacatttgaagttgattatctctaacccttgcttcaattcagctcctaggtcacccact 31537  T
Q  202 tgattcctcaagct 215  Q
    |||||||| |||||    
T  31536 tgattcctaaagct 31523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 128241 - 128181
Alignment:
Q  3 tacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 63  Q
    ||||| || |||||||||||||||||||||||| ||||||||    |||||||||||||||    
T  128241 tacaattatcatcaattcatgcatacaaacatatcatcacagttgaagcacgaatttagca 128181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 151; Significance: 4e-80; HSPs: 27)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 151; E-Value: 4e-80
Query Start/End: Original strand, 2 - 215
Target Start/End: Original strand, 10644410 - 10644621
Alignment:
Q  2 atacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaa 101  Q
    |||||| || ||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||| |    
T  10644410 atacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagca 10644509  T
Q  102 tatgcaaaattatacatgattatgataatcactaacccccttacctttgaagatgattatccttaatcctagcttcacttcagcctctaggtcacccact 201  Q
     |||||||||  ||||||||| ||||||| |||||||||||||||||||||| |||||||||||||||||| ||||||||||||  |||| |||||||||    
T  10644510 aatgcaaaat--tacatgattgtgataataactaacccccttacctttgaagttgattatccttaatcctaacttcacttcagctcctagatcacccact 10644607  T
Q  202 tgattcctcaagct 215  Q
    ||||||||||||||    
T  10644608 tgattcctcaagct 10644621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 47357844 - 47358001
Alignment:
Q  1 tatacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  47357844 tatacaactaacatcaatccatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagg 47357943  T
Q  101 atatgcaaaattatacatgattatgataatcactaacccccttacctttgaagatgatta 160  Q
    | |||||||||  ||||||||| ||||||| ||||||||||||||||| ||||| |||||    
T  47357944 aaatgcaaaat--tacatgattgtgataataactaacccccttaccttagaagaagatta 47358001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 12 - 215
Target Start/End: Original strand, 18169171 - 18169375
Alignment:
Q  12 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaatatgc-aaaa 110  Q
    |||||||||||||| |  || ||| |||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||| |||| ||||    
T  18169171 catcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaa 18169270  T
Q  111 ttatacatgattatgataatcactaacccccttacctttgaagatgattatccttaatcctagcttcacttcagcctctaggtca-cccacttgattcct 209  Q
    || ||||||||||||||||| ||||||||||||||| ||||||| ||||| || |||| || |||||| ||||||  |||| | | |||| |||||||||    
T  18169271 ttgtacatgattatgataataactaacccccttacc-ttgaagaagattaaccctaattcttgcttcaattcagctcctagcttaccccaattgattcct 18169369  T
Q  210 caagct 215  Q
    ||||||    
T  18169370 caagct 18169375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 12 - 215
Target Start/End: Complemental strand, 15287300 - 15287096
Alignment:
Q  12 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaatatgc-aaaa 110  Q
    |||| ||||||||| |  || ||| ||||||||||||||||||||||||||   |||||||||||| ||||||||||||||||||||||| |||| ||||    
T  15287300 catcgattcatgcacaagaaaatagcatcacagcaagagcacgaatttagctataattgttcatcatcccattttcatacaacatgagaaaatgcaaaaa 15287201  T
Q  111 ttatacatgattatgataatcactaacccccttacctttgaagatgattatccttaatcctagcttcacttcagcctctaggtcacccacttgattcctc 210  Q
    || ||||||||||||||||| ||||||||||||||||| ||||| ||||| ||  ||  || |||||| ||||||  ||| ||||||||||||||||||     
T  15287200 ttgtacatgattatgataataactaacccccttaccttagaagaagattaacccaaactcttgcttcaattcagctcctaagtcacccacttgattccta 15287101  T
Q  211 aagct 215  Q
    |||||    
T  15287100 aagct 15287096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 12 - 215
Target Start/End: Complemental strand, 15294409 - 15294205
Alignment:
Q  12 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaatatgc-aaaa 110  Q
    |||| ||||||||| |  || ||| ||||||||||||||||||||||||||   |||||||||||| ||||||||||||||||||||||| |||| ||||    
T  15294409 catcgattcatgcacaagaaaatagcatcacagcaagagcacgaatttagctataattgttcatcatcccattttcatacaacatgagaaaatgcaaaaa 15294310  T
Q  111 ttatacatgattatgataatcactaacccccttacctttgaagatgattatccttaatcctagcttcacttcagcctctaggtcacccacttgattcctc 210  Q
    || ||||||||||||||||| ||||||||||||||||| ||||| ||||| ||  ||  || |||||| ||||||  ||| ||||||||||| ||||||     
T  15294309 ttgtacatgattatgataataactaacccccttaccttagaagaagattaacccaaactcttgcttcaattcagctcctaagtcacccacttcattccta 15294210  T
Q  211 aagct 215  Q
    |||||    
T  15294209 aagct 15294205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 12 - 160
Target Start/End: Complemental strand, 7132120 - 7131971
Alignment:
Q  12 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaatatgc-aaaa 110  Q
    |||||||||||||| |  || ||| ||||||| |||||||||||||||||||  ||||||||||||||||||||||||| |||||||||| |||| ||||    
T  7132120 catcaattcatgcacaagaaaatagcatcacaacaagagcacgaatttagcaacaattgttcatcaacccattttcatataacatgagaaaatgcaaaaa 7132021  T
Q  111 ttatacatgattatgataatcactaacccccttacctttgaagatgatta 160  Q
    || ||||||||||||||||| ||||||||||||||||| ||||| |||||    
T  7132020 ttgtacatgattatgataataactaacccccttaccttagaagaagatta 7131971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 12 - 160
Target Start/End: Original strand, 20000924 - 20001073
Alignment:
Q  12 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaatatgc-aaaa 110  Q
    |||||||||||||| |  || ||||||| ||| ||||||||||||||||||   |||||||||||||||||||||||||||||||||||| |||| ||||    
T  20000924 catcaattcatgcacaagaaaataacattacaacaagagcacgaatttagccacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaa 20001023  T
Q  111 ttatacatgattatgataatcactaacccccttacctttgaagatgatta 160  Q
    || ||||||||||||||||| ||||||||||||||||| ||||| |||||    
T  20001024 ttgtacatgattatgataataactaacccccttaccttagaagaagatta 20001073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 14 - 160
Target Start/End: Original strand, 18248421 - 18248568
Alignment:
Q  14 tcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaatatg-caaaatt 112  Q
    |||||||||||| |  || ||| |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| |||  ||||||    
T  18248421 tcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaacccattttcatacaacatgagaaaatgtaaaaatt 18248520  T
Q  113 atacatgattatgataatcactaacccccttacctttgaagatgatta 160  Q
     |||| |||||||||||| ||||||||||||||||| || ||||||||    
T  18248521 gtacaagattatgataataactaacccccttaccttagatgatgatta 18248568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 12 - 160
Target Start/End: Complemental strand, 17145712 - 17145563
Alignment:
Q  12 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaatatgc-aaaa 110  Q
    |||||||||||| | |  || ||| |||||||| ||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||| |||| ||||    
T  17145712 catcaattcatgtacaagaaaatagcatcacagtaagagcacgaatttaacatcaattgttcatcaactcattttcatacaacatgagaaaatgcaaaaa 17145613  T
Q  111 ttatacatgattatgataatcactaacccccttacctttgaagatgatta 160  Q
    ||  |||||||||||||||| ||||||||||||||||| ||||| |||||    
T  17145612 ttgaacatgattatgataataactaacccccttaccttagaagaagatta 17145563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 12 - 148
Target Start/End: Original strand, 19020687 - 19020824
Alignment:
Q  12 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaatatgc-aaaa 110  Q
    |||||||||||||| |  || ||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| || |||| ||||    
T  19020687 catcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaagaattgttcatcaacccattttcatacaacatgacaaaatgcaaaaa 19020786  T
Q  111 ttatacatgattatgataatcactaacccccttacctt 148  Q
    ||  |||||||||||||  | |||||||||||||||||    
T  19020787 ttgaacatgattatgatggtaactaacccccttacctt 19020824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 45 - 215
Target Start/End: Complemental strand, 22352086 - 22351915
Alignment:
Q  45 caagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaatatgcaaaattataca-tgattatgataatcactaaccccctt 143  Q
    |||||||| ||||||  |||||||||||||||||||||||||||||||||||||||| ||| ||||||  | | ||||||||||||| ||||||||||||    
T  22352086 caagagcatgaatttgacatgaattgttcatcaacccattttcatacaacatgagaagatgtaaaatttgaaattgattatgataataactaaccccctt 22351987  T
Q  144 acctttgaagatgattatccttaatcctagcttcacttcagcctctaggtcacccacttgattcctcaagct 215  Q
    ||||| ||||| ||||| ||  ||  || |||||| ||||||  ||| |||||||||||||||||| |||||    
T  22351986 accttagaagaagattaacccaaactcttgcttcaattcagctcctaagtcacccacttgattcctaaagct 22351915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 37 - 139
Target Start/End: Original strand, 8378377 - 8378480
Alignment:
Q  37 catcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaatatg-caaaattatacatgattatgataatcacta 135  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||| |||  |||||| ||||||||||||||||| ||||    
T  8378377 catcacagcaagagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgagaaaatgtaaaaattgtacatgattatgataataacta 8378476  T
Q  136 accc 139  Q
    ||||    
T  8378477 accc 8378480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 45 - 160
Target Start/End: Original strand, 26339253 - 26339369
Alignment:
Q  45 caagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaatatgcaaaattataca-tgattatgataatcactaaccccctt 143  Q
    |||||||||||||||  ||||||||||||||||||||||||||||||||||||| || ||| ||||||  | | ||||||||||||| ||||||||||||    
T  26339253 caagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaaaagatgtaaaatttgaaattgattatgataataactaaccccctt 26339352  T
Q  144 acctttgaagatgatta 160  Q
    ||||| ||||| |||||    
T  26339353 accttagaagaagatta 26339369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 12 - 110
Target Start/End: Original strand, 22738470 - 22738568
Alignment:
Q  12 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaatatgcaaaa 110  Q
    |||||||||||||| |  || ||| ||||||||||||| |||||||||| ||| |||||||| ||| ||||||||||||||||||||||| ||||||||    
T  22738470 catcaattcatgcacaagaaaatagcatcacagcaagaacacgaatttaacatcaattgttcctcagcccattttcatacaacatgagaaaatgcaaaa 22738568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 117 - 215
Target Start/End: Original strand, 14952085 - 14952183
Alignment:
Q  117 atgattatgataatcactaacccccttacctttgaagatgattatccttaatcctagcttcacttcagcctctaggtcacccacttgattcctcaagct 215  Q
    |||||||||||||  ||||||||||||||||| ||||| ||||| ||  ||  || |||||| ||||||  ||| |||||||||||||||||| |||||    
T  14952085 atgattatgataaagactaacccccttaccttagaagaagattaacccaaactcttgcttcaattcagctcctaagtcacccacttgattcctaaagct 14952183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 63
Target Start/End: Complemental strand, 15675162 - 15675101
Alignment:
Q  2 atacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 63  Q
    |||||| || |||||||||||||||||||||||| ||||||||   ||||||||||||||||    
T  15675162 atacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagca 15675101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 74 - 148
Target Start/End: Original strand, 9795490 - 9795564
Alignment:
Q  74 atcaacccattttcatacaacatgagaatatgcaaaa-ttatacatgattatgataatcactaacccccttacctt 148  Q
    |||||||||||| ||||||||||||||| ||| |||| ||  ||||||||||||| || |||||||||||||||||    
T  9795490 atcaacccattt-catacaacatgagaaaatgaaaaaattgaacatgattatgatgataactaacccccttacctt 9795564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 63
Target Start/End: Original strand, 33240900 - 33240951
Alignment:
Q  12 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 63  Q
    |||||||||||||||||||||||| ||||||||   ||||||||||||||||    
T  33240900 catcaattcatgcatacaaacatatcatcacagttggagcacgaatttagca 33240951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 63
Target Start/End: Complemental strand, 10104323 - 10104262
Alignment:
Q  2 atacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 63  Q
    |||||| || |||||||||||||||||||||||| ||||||||   ||||||| ||||||||    
T  10104323 atacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacggatttagca 10104262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 63
Target Start/End: Complemental strand, 54118317 - 54118256
Alignment:
Q  2 atacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 63  Q
    |||||| || |||||||||||||||||||||||| |||||||    ||||||||||||||||    
T  54118317 atacaattatcatcaattcatgcatacaaacatatcatcacaattggagcacgaatttagca 54118256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 122080 - 122140
Alignment:
Q  3 tacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 63  Q
    ||||| || |||||||||||||||||||||||| ||||||||   |||||| |||||||||    
T  122080 tacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacaaatttagca 122140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 63
Target Start/End: Original strand, 10488763 - 10488813
Alignment:
Q  13 atcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 63  Q
    ||||||||||||||||||||||| ||||| ||   ||||||||||||||||    
T  10488763 atcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 10488813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 63
Target Start/End: Complemental strand, 16327988 - 16327938
Alignment:
Q  13 atcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 63  Q
    ||||||||||||||||||||||| ||||| ||   ||||||||||||||||    
T  16327988 atcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 16327938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 63
Target Start/End: Original strand, 26680401 - 26680451
Alignment:
Q  13 atcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 63  Q
    ||||||||||||||||||||||| ||||| ||   ||||||||||||||||    
T  26680401 atcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 26680451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 31115819 - 31115861
Alignment:
Q  2 atacaactaacatcaattcatgcatacaaacataacatcacag 44  Q
    |||||| || |||||||||||||||||||||||| ||||||||    
T  31115819 atacaattatcatcaattcatgcatacaaacatatcatcacag 31115861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 107 - 148
Target Start/End: Original strand, 8378483 - 8378524
Alignment:
Q  107 aaaattatacatgattatgataatcactaacccccttacctt 148  Q
    |||||| ||||||||||||||||| ||||| |||||||||||    
T  8378483 aaaattgtacatgattatgataataactaatccccttacctt 8378524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 148
Target Start/End: Original strand, 14996444 - 14996476
Alignment:
Q  116 catgattatgataatcactaacccccttacctt 148  Q
    ||||||||||||||| |||||||||||||||||    
T  14996444 catgattatgataataactaacccccttacctt 14996476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 150; Significance: 2e-79; HSPs: 29)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 2 - 215
Target Start/End: Original strand, 41270266 - 41270478
Alignment:
Q  2 atacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaa 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  41270266 atacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagta 41270365  T
Q  102 tatgcaaaattatacatgattatgataatcactaacccccttacctttgaagatgattatccttaatcctagcttcacttcagcctctaggtcacccact 201  Q
     |||||||| | ||||||||| ||||||| ||||||||||||||||||||||| ||||| || ||||||| |||||| ||||||  ||| ||||||||||    
T  41270366 gatgcaaaaat-tacatgattgtgataataactaacccccttacctttgaagaagattaaccctaatccttgcttcaattcagctcctaagtcacccact 41270464  T
Q  202 tgattcctcaagct 215  Q
    |||||||| |||||    
T  41270465 tgattcctaaagct 41270478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 146; E-Value: 4e-77
Query Start/End: Original strand, 2 - 215
Target Start/End: Original strand, 55316410 - 55316622
Alignment:
Q  2 atacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaa 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  55316410 atacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagca 55316509  T
Q  102 tatgcaaaattatacatgattatgataatcactaacccccttacctttgaagatgattatccttaatcctagcttcacttcagcctctaggtcacccact 201  Q
     |||||||| | ||||||||| ||||||| ||||||||| ||||||||||||| ||||| || ||||||| |||||| ||||||  ||| ||||||||||    
T  55316510 aatgcaaaaat-tacatgattgtgataataactaacccctttacctttgaagaagattaaccctaatccttgcttcaattcagctcctaagtcacccact 55316608  T
Q  202 tgattcctcaagct 215  Q
    |||||||| |||||    
T  55316609 tgattcctaaagct 55316622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 12 - 215
Target Start/End: Original strand, 49232637 - 49232842
Alignment:
Q  12 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaatatgcaaa-a 110  Q
    |||||||||||||| |  || ||| |||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||| ||||||| |    
T  49232637 catcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaga 49232736  T
Q  111 ttatacatgattatgataatcactaacccccttacctttgaagatgattatccttaatcctagcttcacttcagcctctaggtcaccc-acttgattcct 209  Q
    || ||||||||||||||||| |||||||||||||||||||||| ||||||||  ||| ||| |||||| ||||||   |||||||||| | ||||||||     
T  49232737 ttgtacatgattatgataataactaacccccttacctttgaagttgattatctctaacccttgcttcaattcagctcataggtcacccaaattgattccc 49232836  T
Q  210 caagct 215  Q
    ||||||    
T  49232837 caagct 49232842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 12 - 215
Target Start/End: Complemental strand, 12264847 - 12264641
Alignment:
Q  12 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaatatgc-aaaa 110  Q
    |||||||||||||| |  || ||| |||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||| |||| ||||    
T  12264847 catcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaa 12264748  T
Q  111 ttatacatgattatgataatcactaacccccttacctttgaagatgattatccttaatcctagcttcacttcagcctctaggtcaccc--acttgattcc 208  Q
    || ||||||||||||||||| |||||||||||||||||||||||||||||  |  || | | |||||| ||||||  |||||||||||  | ||||||||    
T  12264747 ttgtacatgattatgataataactaacccccttacctttgaagatgattaatcccaacctttgcttcaattcagctcctaggtcaccccaaattgattcc 12264648  T
Q  209 tcaagct 215  Q
    |||||||    
T  12264647 tcaagct 12264641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 12 - 215
Target Start/End: Original strand, 22275410 - 22275615
Alignment:
Q  12 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaatatgcaaaa- 110  Q
    |||||||||||||| |  || ||  |||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||| ||||||||     
T  22275410 catcaattcatgcacaagaaaatggcatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaat 22275509  T
Q  111 ttatacatgattatgataatcactaacccccttacctttgaagatgattatccttaatcctagcttcacttcagcctctaggtca-cccacttgattcct 209  Q
    || ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||   | |||||| ||||||  |||| | | |||| |||||||||    
T  22275510 ttgtacatgattatgataataactaacccccttacctttgaagatgattaaccttaacttttgcttcaattcagctcctagcttaccccaattgattcct 22275609  T
Q  210 caagct 215  Q
    ||||||    
T  22275610 caagct 22275615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 2 - 160
Target Start/End: Original strand, 16821330 - 16821486
Alignment:
Q  2 atacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaa 101  Q
    |||||| || |||||||| |||||||||||||||||||||||||||||||||| ||||  ||| |||||||||||||||||||||||||||||||||| |    
T  16821330 atacaattatcatcaatttatgcatacaaacataacatcacagcaagagcacggatttgacataaattgttcatcaacccattttcatacaacatgagca 16821429  T
Q  102 tatgcaaaattatacatgattatgataatcactaacccccttacctttgaagatgatta 160  Q
     |||||||||  ||||||||| ||||||| ||||||||||||||||||||||| |||||    
T  16821430 aatgcaaaat--tacatgattgtgataataactaacccccttacctttgaagaagatta 16821486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 12 - 215
Target Start/End: Complemental strand, 1467794 - 1467589
Alignment:
Q  12 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaatatgcaaa-a 110  Q
    |||||||||| ||| |  || ||| |||||||||||||||||||||||| ||  ||||||||| |||||||||||||||||||||||||| ||||||| |    
T  1467794 catcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgagaaaatgcaaaga 1467695  T
Q  111 ttatacatgattatgataatcactaacccccttacctttgaagatgattatccttaatcctagcttcacttcagcctctaggtcaccc-acttgattcct 209  Q
    || ||||||||||||||||| |||||||||||||||||||||| ||||||||  ||| ||| |||||| ||||||  ||||||||||| | ||||||||     
T  1467694 ttgtacatgattatgataataactaacccccttacctttgaagttgattatctctaacccttgcttcaattcagctcctaggtcacccaaattgattccc 1467595  T
Q  210 caagct 215  Q
    ||||||    
T  1467594 caagct 1467589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 12 - 185
Target Start/End: Complemental strand, 15468395 - 15468221
Alignment:
Q  12 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaatatgcaaaa- 110  Q
    |||||||||||||| |  || ||| ||||| |||||||||||||||||||||  |||||||| ||||||||||||||||||||||||||| ||||||||     
T  15468395 catcaattcatgcacaagaaaatagcatcatagcaagagcacgaatttagcaacaattgttcctcaacccattttcatacaacatgagaaaatgcaaaat 15468296  T
Q  111 ttatacatgattatgataatcactaacccccttacctttgaagatgattatccttaatcctagcttcacttcagc 185  Q
    || ||||||||||||||||| ||||||||||||||||||||||| ||||| || |||| || |||||| ||||||    
T  15468295 ttgtacatgattatgataataactaacccccttacctttgaagaagattaaccctaattcttgcttcaattcagc 15468221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 3 - 148
Target Start/End: Original strand, 15615025 - 15615168
Alignment:
Q  3 tacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaat 102  Q
    ||||| || |||||||||||||||||||| |||||| ||||| |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||     
T  15615025 tacaattatcatcaattcatgcatacaaatataacaccacagtaagagcacaaatctagcatgaattgttcatcaacccattttcatacaacatgagaaa 15615124  T
Q  103 atgcaaaattatacatgattatgataatcactaacccccttacctt 148  Q
    |||||||||  ||||||||||||||||  |||||||||||||||||    
T  15615125 atgcaaaat--tacatgattatgataaagactaacccccttacctt 15615168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 12 - 185
Target Start/End: Original strand, 25058940 - 25059114
Alignment:
Q  12 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaatatgc-aaaa 110  Q
    |||||||||||||| |  || ||| |||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||| |||| ||||    
T  25058940 catcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaa 25059039  T
Q  111 ttatacatgattatgataatcactaacccccttacctttgaagatgattatccttaatcctagcttcacttcagc 185  Q
    || | ||||||||||||||| ||||||||||||||||||||||| ||||| || ||||  | |||||| ||||||    
T  25059040 ttgtgcatgattatgataataactaacccccttacctttgaagaagattaaccctaatttttgcttcaattcagc 25059114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 12 - 160
Target Start/End: Original strand, 18911194 - 18911343
Alignment:
Q  12 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaatatgc-aaaa 110  Q
    |||||||||||||| |  || ||| ||||||| |||||||||||||||||||  |||||||||||||||||||||||||||||||||||| |||| ||||    
T  18911194 catcaattcatgcacaagaaaatagcatcacaacaagagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaa 18911293  T
Q  111 ttatacatgattatgataatcactaacccccttacctttgaagatgatta 160  Q
    || ||||||||||||||||| ||||||||||||||||| ||||| |||||    
T  18911294 ttgtacatgattatgataataactaacccccttaccttagaagaagatta 18911343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 12 - 215
Target Start/End: Original strand, 12812042 - 12812247
Alignment:
Q  12 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaatatgcaaa-a 110  Q
    |||||||||| ||| |  || ||| ||| |||||||||||||||||||| ||  |||||| ||||||||||||||||||||| ||||||| ||||||| |    
T  12812042 catcaattcaagcacaagaaaatagcattacagcaagagcacgaatttaacaacaattgtccatcaacccattttcatacaatatgagaaaatgcaaaga 12812141  T
Q  111 ttatacatgattatgataatcactaacccccttacctttgaagatgattatccttaatcctagcttcacttcagcctctaggtcaccc-acttgattcct 209  Q
    || ||||||||||||||||| |||||||||||||||||| ||| ||||||||  ||| ||| |||||| ||||||  ||||||||||| | ||||||||     
T  12812142 ttgtacatgattatgataataactaacccccttacctttaaagttgattatctctaacccttgcttcaattcagctcctaggtcacccaaattgattccc 12812241  T
Q  210 caagct 215  Q
    ||||||    
T  12812242 caagct 12812247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 12 - 160
Target Start/End: Complemental strand, 18897099 - 18896950
Alignment:
Q  12 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaatatgcaaaa- 110  Q
    |||||||||||||| |  || ||| |||||||||||||||||||||||| ||  |||||||||||||||||||||||||||||||||||| || |||||     
T  18897099 catcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttatcaacaattgttcatcaacccattttcatacaacatgagaaaatacaaaac 18897000  T
Q  111 ttatacatgattatgataatcactaacccccttacctttgaagatgatta 160  Q
    || ||||||||||||||||| ||||||||||||||||| ||||| |||||    
T  18896999 ttgtacatgattatgataataactaacccccttaccttggaagaagatta 18896950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 12 - 148
Target Start/End: Complemental strand, 12902145 - 12902008
Alignment:
Q  12 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaatatgc-aaaa 110  Q
    |||||||||||||| |  || |||||||||||||||||||||||||||||||  |||| ||||||||||||||||||||||||||||||| |||| ||||    
T  12902145 catcaattcatgcacaagaaaataacatcacagcaagagcacgaatttagcaaaaattattcatcaacccattttcatacaacatgagaaaatgcaaaaa 12902046  T
Q  111 ttatacatgattatgataatcactaacccccttacctt 148  Q
    ||  ||||||||||||| || |||||||||||||||||    
T  12902045 ttgaacatgattatgatgataactaacccccttacctt 12902008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 2 - 148
Target Start/End: Complemental strand, 15936700 - 15936553
Alignment:
Q  2 atacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaa 101  Q
    |||||| || |||||||||||||||||||||||| ||| ||||   |||||||||||||| |  ||||||||||||||||||||||||||||||||||||    
T  15936700 atacaattatcatcaattcatgcatacaaacatatcattacagttggagcacgaatttagtaacaattgttcatcaacccattttcatacaacatgagaa 15936601  T
Q  102 tatgc-aaaattatacatgattatgataatcactaacccccttacctt 148  Q
     |||| ||||||  |||||||||| || || |||||||||| ||||||    
T  15936600 aatgcaaaaattgaacatgattataatgataactaacccccatacctt 15936553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 2 - 160
Target Start/End: Original strand, 54651648 - 54651807
Alignment:
Q  2 atacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaa 101  Q
    |||||| || |||||||||||||| |  || ||| |||||||||||||||||||||||||||  |||| |||||||||||||||||||||||||||||||    
T  54651648 atacaattatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattattcatcaacccattttcatacaacatgagaa 54651747  T
Q  102 tatgc-aaaattatacatgattatgataatcactaacccccttacctttgaagatgatta 160  Q
      ||| ||||||  ||||||||||||| |  || |||||||||||||| || ||||||||    
T  54651748 attgcaaaaattgaacatgattatgatgaagacaaacccccttaccttagatgatgatta 54651807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 12 - 160
Target Start/End: Original strand, 5228514 - 5228662
Alignment:
Q  12 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaatatgc-aaaa 110  Q
    |||||||||||||| |   | |||||||||||||||||||||||||||||||  || ||||||||||||||||||||||  ||||||||| |||| ||||    
T  5228514 catcaattcatgcacaaggaaataacatcacagcaagagcacgaatttagcaacaa-tgttcatcaacccattttcataacacatgagaaaatgcaaaaa 5228612  T
Q  111 ttatacatgattatgataatcactaacccccttacctttgaagatgatta 160  Q
    ||  ||||||||||||| || ||||||||||||||||| ||||| |||||    
T  5228613 ttgaacatgattatgatgataactaacccccttaccttagaagaagatta 5228662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 2 - 148
Target Start/End: Complemental strand, 15938542 - 15938395
Alignment:
Q  2 atacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaa 101  Q
    |||||| || ||||||||||||  |||||||||| ||| ||||   ||||||| |||||| |  ||||||||||||||||||||||||||||||||||||    
T  15938542 atacaattatcatcaattcatgattacaaacatatcattacagttggagcacgtatttagtaacaattgttcatcaacccattttcatacaacatgagaa 15938443  T
Q  102 tatgc-aaaattatacatgattatgataatcactaacccccttacctt 148  Q
     |||| ||||||  |||||||||| || || |||||||||||||||||    
T  15938442 aatgcaaaaattgaacatgattataatgataactaacccccttacctt 15938395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 12 - 94
Target Start/End: Original strand, 44229186 - 44229268
Alignment:
Q  12 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaac 94  Q
    |||||||||||||| |  || ||| ||||||| |||||||||| ||||| ||| |||||||||||||||||||||||||||||    
T  44229186 catcaattcatgcacaagaaaatagcatcacaacaagagcacggatttaacatcaattgttcatcaacccattttcatacaac 44229268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 14 - 185
Target Start/End: Complemental strand, 14842622 - 14842451
Alignment:
Q  14 tcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaaca--tgagaatatgcaaaat 111  Q
    |||||||||||||||||||||| ||||||||   ||||||||||||||||  |||| | ||| | | ||  |||||||||||  ||||||| |||||| |    
T  14842622 tcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccataatcaca-attcatacaacatttgagaatttgcaaagt 14842524  T
Q  112 tatacatgattatgataatcactaacccccttacctttgaagatgattatccttaatcctagcttcacttcagc 185  Q
     | | |||||||||||||  ||||||||||||||||| ||||| ||||| || |||  || |||||| ||||||    
T  14842523 ga-agatgattatgataaagactaacccccttaccttagaagaagattaaccctaactcttgcttcaattcagc 14842451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 63
Target Start/End: Original strand, 13839084 - 13839145
Alignment:
Q  2 atacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 63  Q
    |||||| || |||||||||||||||||||||||| ||||||||   ||||||||||||||||    
T  13839084 atacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagca 13839145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 63
Target Start/End: Complemental strand, 15859097 - 15859036
Alignment:
Q  2 atacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 63  Q
    |||||| || |||||||||||||||||||||||| ||||||||   ||||||||||||||||    
T  15859097 atacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagca 15859036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 63
Target Start/End: Complemental strand, 51158091 - 51158030
Alignment:
Q  2 atacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 63  Q
    |||||| || |||||||||||||||||||||||| ||||||||   ||||||||||||||||    
T  51158091 atacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagca 51158030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 12030219 - 12030159
Alignment:
Q  3 tacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 63  Q
    ||||| || |||||||||||||||||||||||| ||||||||   ||||||||||||||||    
T  12030219 tacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagca 12030159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 160
Target Start/End: Complemental strand, 8268683 - 8268639
Alignment:
Q  116 catgattatgataatcactaacccccttacctttgaagatgatta 160  Q
    ||||||||||||||| ||||||||||||||||| ||||| |||||    
T  8268683 catgattatgataataactaacccccttaccttagaagaagatta 8268639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 160
Target Start/End: Complemental strand, 8275783 - 8275739
Alignment:
Q  116 catgattatgataatcactaacccccttacctttgaagatgatta 160  Q
    ||||||||||||||| ||||||||||||||||| ||||| |||||    
T  8275783 catgattatgataataactaacccccttaccttagaagaagatta 8275739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 63
Target Start/End: Complemental strand, 2449300 - 2449250
Alignment:
Q  13 atcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 63  Q
    ||||||||||||||||||||||| ||||| ||   ||||||||||||||||    
T  2449300 atcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 2449250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 2 - 63
Target Start/End: Complemental strand, 17912555 - 17912495
Alignment:
Q  2 atacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 63  Q
    |||||| || |||||||||||||||||||||||| ||||| ||   ||||||||||||||||    
T  17912555 atacaattatcatcaattcatgcatacaaacatatcatca-agttggagcacgaatttagca 17912495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 2050001 - 2050061
Alignment:
Q  3 tacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 63  Q
    ||||| || |||||||||| ||||||||||||| | ||||||   ||||||||||||||||    
T  2050001 tacaattatcatcaattcaggcatacaaacatatcgtcacagttggagcacgaatttagca 2050061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1711 (Bit Score: 142; Significance: 1e-74; HSPs: 1)
Name: scaffold1711
Description:

Target: scaffold1711; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 2 - 215
Target Start/End: Complemental strand, 1365 - 1153
Alignment:
Q  2 atacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaa 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  1365 atacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagta 1266  T
Q  102 tatgcaaaattatacatgattatgataatcactaacccccttacctttgaagatgattatccttaatcctagcttcacttcagcctctaggtcacccact 201  Q
     |||||||| | ||||||||| ||||||| |||||||||| |||||||||||| ||||| || ||||||| |||||| ||||||  ||| |||||| |||    
T  1265 aatgcaaaaat-tacatgattgtgataataactaacccccctacctttgaagaagattaaccctaatccttgcttcaattcagctcctaagtcaccaact 1167  T
Q  202 tgattcctcaagct 215  Q
    |||||||| |||||    
T  1166 tgattcctaaagct 1153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 138; Significance: 3e-72; HSPs: 22)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 2 - 215
Target Start/End: Complemental strand, 5072449 - 5072237
Alignment:
Q  2 atacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaa 101  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |    
T  5072449 atacaactaacatcaattcatgcatataaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacttgagta 5072350  T
Q  102 tatgcaaaattatacatgattatgataatcactaacccccttacctttgaagatgattatccttaatcctagcttcacttcagcctctaggtcacccact 201  Q
     |||||||| | ||||||||| ||||||| ||||||||||||||||||||||| ||||| || ||||| | |||||| ||||||  ||| ||||||||||    
T  5072349 aatgcaaaaat-tacatgattgtgataataactaacccccttacctttgaagaagattaaccctaatctttgcttcaattcagctcctaagtcacccact 5072251  T
Q  202 tgattcctcaagct 215  Q
    |||||||| |||||    
T  5072250 tgattcctaaagct 5072237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 12 - 215
Target Start/End: Complemental strand, 18059813 - 18059608
Alignment:
Q  12 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaatatgcaaa-a 110  Q
    |||||||||||||| |  || ||| |||||||||||||||||||||||| ||  |||||||||||||||||||||||||||||||||||| ||||||| |    
T  18059813 catcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaga 18059714  T
Q  111 ttatacatgattatgataatcactaacccccttacctttgaagatgattatccttaatcctagcttcacttcagcctctaggtca-cccacttgattcct 209  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||| | ||| ||| |||||| ||||||  |||||||| |||| |||||||||    
T  18059713 ttatacatgattatgataataactaacccccttacctttgaagatgattattcctaacccttgcttcaattcagctcctaggtcaccccaattgattcct 18059614  T
Q  210 caagct 215  Q
    ||||||    
T  18059613 caagct 18059608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 2 - 185
Target Start/End: Original strand, 22227999 - 22228183
Alignment:
Q  2 atacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaa 101  Q
    |||||| || |||||||||||||| |  || ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  22227999 atacaattatcatcaattcatgcacaagaaaataacatcacagcaagagcacgaatttagcaagaattgttcatcaacccattttcatacaacatgagaa 22228098  T
Q  102 tatgc-aaaattatacatgattatgataatcactaacccccttacctttgaagatgattatccttaatcctagcttcacttcagc 185  Q
     |||| |||||| ||||||||||||||||| ||||||||||||||||||||||||||||| || |||  || |||||| ||||||    
T  22228099 aatgcaaaaattgtacatgattatgataataactaacccccttacctttgaagatgattaaccctaactcttgcttcaattcagc 22228183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 2 - 185
Target Start/End: Original strand, 22232696 - 22232880
Alignment:
Q  2 atacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaa 101  Q
    |||||| || |||||||||||||| |  || ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  22232696 atacaattatcatcaattcatgcacaagaaaataacatcacagcaagagcacgaatttagcaagaattgttcatcaacccattttcatacaacatgagaa 22232795  T
Q  102 tatgc-aaaattatacatgattatgataatcactaacccccttacctttgaagatgattatccttaatcctagcttcacttcagc 185  Q
     |||| |||||| ||||||||||||||||| ||||||||||||||||||||||||||||| || |||  || |||||| ||||||    
T  22232796 aatgcaaaaattgtacatgattatgataataactaacccccttacctttgaagatgattaaccctaactcttgcttcaattcagc 22232880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 2 - 148
Target Start/End: Original strand, 2116445 - 2116589
Alignment:
Q  2 atacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaa 101  Q
    |||||| || ||||||||||||||||||||||||||||||||| || ||||||||| |||||||||||||||||||||||||||| ||||||||||||||    
T  2116445 atacaattatcatcaattcatgcatacaaacataacatcacagtaaaagcacgaatctagcatgaattgttcatcaacccatttttatacaacatgagaa 2116544  T
Q  102 tatgcaaaattatacatgattatgataatcactaacccccttacctt 148  Q
     |||||||||  ||||||||||||||||||||||||||| |||||||    
T  2116545 aatgcaaaat--tacatgattatgataatcactaacccctttacctt 2116589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 2 - 130
Target Start/End: Complemental strand, 18601179 - 18601052
Alignment:
Q  2 atacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaa 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |    
T  18601179 atacaactaacatcaattcatgcatacaaacataacatcacagcaagagcatgaatttagcatgaattgttcatcaacccattttcatacaacatgagca 18601080  T
Q  102 tatgcaaaattatacatgattatgataat 130  Q
     |||||||| | ||||||||| |||||||    
T  18601079 aatgcaaaaat-tacatgattgtgataat 18601052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 12 - 215
Target Start/End: Original strand, 17148768 - 17148974
Alignment:
Q  12 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaatatgc-aaaa 110  Q
    |||||||||||||| |  || ||||||| ||| ||||||||||||||||||   |||||||||||||||||||||||||||||||||||| |||| ||||    
T  17148768 catcaattcatgcacaagaaaataacattacaacaagagcacgaatttagccacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaa 17148867  T
Q  111 ttatacatgattatgataatcactaa-cccccttacctttgaagatgattatccttaatcctagcttcacttcagcctctaggtca-cccacttgattcc 208  Q
    || ||||||||||||||||| ||||| ||||||||||||||||| |||||||||  || ||| |||||| ||||||  ||| |||| |||||||||||||    
T  17148868 ttgtacatgattatgataataactaaccccccttacctttgaagttgattatccccaacccttgcttcaattcagctcctatgtcaccccacttgattcc 17148967  T
Q  209 tcaagct 215  Q
    |||||||    
T  17148968 tcaagct 17148974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 12 - 215
Target Start/End: Original strand, 17004839 - 17005044
Alignment:
Q  12 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaatatgcaaa-a 110  Q
    |||||||||| ||| |  || ||| |||||||||||||||||||||||| ||  ||||||||| |||||||||||||||||||||||||| ||||||| |    
T  17004839 catcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgagaaaatgcaaaga 17004938  T
Q  111 ttatacatgattatgataatcactaacccccttacctttgaagatgattatccttaatcctagcttcacttcagcctctaggtcaccc-acttgattcct 209  Q
    || ||||||||||||||||| |||||||||||||||||||||| ||||||||  ||| ||| |||||| ||||||  ||||||||||| | ||||||||     
T  17004939 ttgtacatgattatgataataactaacccccttacctttgaagttgattatctctaacccttgcttcaattcagctcctaggtcacccaaattgattccc 17005038  T
Q  210 caagct 215  Q
    ||||||    
T  17005039 caagct 17005044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 2 - 148
Target Start/End: Original strand, 45051613 - 45051757
Alignment:
Q  2 atacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaa 101  Q
    |||||| || ||||||||||||||||||||| ||||||||||| |||| ||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  45051613 atacaattatcatcaattcatgcatacaaacgtaacatcacagtaagaacacgaatctagcatgaattgttcatcaacccattttcatacaacatgagaa 45051712  T
Q  102 tatgcaaaattatacatgattatgataatcactaacccccttacctt 148  Q
     |||||||||   |||||||||||||||  |||||||||||||||||    
T  45051713 aatgcaaaat--cacatgattatgataaagactaacccccttacctt 45051757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 12 - 215
Target Start/End: Complemental strand, 38055146 - 38054941
Alignment:
Q  12 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaatatgcaaa-a 110  Q
    |||||||||| ||| |  || |||||||||||| || |||||||||||| ||  ||||||||| |||||||||||||||||||||||||| ||||||| |    
T  38055146 catcaattcaagcacaagaaaataacatcacagtaaaagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgagaagatgcaaaga 38055047  T
Q  111 ttatacatgattatgataatcactaacccccttacctttgaagatgattatccttaatcctagcttcacttcagcctctaggtcaccc-acttgattcct 209  Q
    || ||||||||||||||||| |||||||||||||||||||||| ||||||||  ||| ||| |||||| ||||||  ||||||||||| | ||||||||     
T  38055046 ttgtacatgattatgataataactaacccccttacctttgaagttgattatctctaacccttgcttcaattcagctcctaggtcacccaaattgattccc 38054947  T
Q  210 caagct 215  Q
    ||||||    
T  38054946 caagct 38054941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 10 - 160
Target Start/End: Original strand, 46523588 - 46523738
Alignment:
Q  10 aacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaatatgcaaa 109  Q
    |||||||||||||||| |  || ||| ||||||| |||||||||||||||||||  |||||||||||||||||||||||||||||||||||| |||||||    
T  46523588 aacatcaattcatgcacaagaaaatagcatcacaacaagagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgagaaaatgcaaa 46523687  T
Q  110 attatacatgattatgataatcactaacccccttacctttgaagatgatta 160  Q
    ||   |||||||||||||||| ||||||||||||||||| ||||| |||||    
T  46523688 atggaacatgattatgataataactaacccccttaccttagaagaagatta 46523738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 41 - 199
Target Start/End: Complemental strand, 19962525 - 19962366
Alignment:
Q  41 acagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaatatgcaaa-attatacatgattatgataatcactaaccc 139  Q
    |||||||||||||||||||| ||  |||||| ||||||||||||||||||||||||||||| ||||||| ||| ||||||||||||||||| ||||||||    
T  19962525 acagcaagagcacgaatttaacaacaattgtccatcaacccattttcatacaacatgagaaaatgcaaagattgtacatgattatgataataactaaccc 19962426  T
Q  140 ccttacctttgaagatgattatccttaatcctagcttcacttcagcctctaggtcaccca 199  Q
    |||||||||||||| ||||||||  ||| ||| |||||| ||||||  ||||||| ||||    
T  19962425 ccttacctttgaagttgattatctctaacccttgcttcaattcagctcctaggtcgccca 19962366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 45 - 160
Target Start/End: Original strand, 22035681 - 22035797
Alignment:
Q  45 caagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaatatgcaaaattataca-tgattatgataatcactaaccccctt 143  Q
    |||||||||||||||  |||||||||||||||||||||||||||||||||||||||| ||| ||||||  | | ||||||||||||| ||||||||||||    
T  22035681 caagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagaagatgtaaaatttgaaattgattatgataataactaaccccctt 22035780  T
Q  144 acctttgaagatgatta 160  Q
    ||||| ||||| |||||    
T  22035781 accttagaagaagatta 22035797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 45 - 160
Target Start/End: Complemental strand, 7640956 - 7640840
Alignment:
Q  45 caagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaatatgcaaaattataca-tgattatgataatcactaaccccctt 143  Q
    |||||||||||||||  ||||||||||||||||||||||||||||||||||||| || ||| ||||||  | | ||||||||||||| ||||||||||||    
T  7640956 caagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaaaagatgtaaaatttgaaattgattatgataataactaaccccctt 7640857  T
Q  144 acctttgaagatgatta 160  Q
    ||||| ||||| |||||    
T  7640856 accttagaagaagatta 7640840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 117 - 185
Target Start/End: Complemental strand, 15861358 - 15861290
Alignment:
Q  117 atgattatgataatcactaacccccttacctttgaagatgattatccttaatcctagcttcacttcagc 185  Q
    |||||||||||||  ||||||||||||||||||||||||||||| || |||  || |||||| ||||||    
T  15861358 atgattatgataaagactaacccccttacctttgaagatgattaaccctaactcttgcttcaattcagc 15861290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 20913221 - 20913281
Alignment:
Q  3 tacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 63  Q
    ||||| || |||||||||||||||||||||||| ||||||||   ||||||||||||||||    
T  20913221 tacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagca 20913281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 20931536 - 20931596
Alignment:
Q  3 tacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 63  Q
    ||||| || |||||||||||||||||||||||| ||||||||   ||||||||||||||||    
T  20931536 tacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagca 20931596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 63
Target Start/End: Original strand, 20445869 - 20445930
Alignment:
Q  2 atacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 63  Q
    |||||| || |||||||||||||||||||||||| |||||||    ||||||||||||||||    
T  20445869 atacaattatcatcaattcatgcatacaaacatatcatcacaattggagcacgaatttagca 20445930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 63
Target Start/End: Complemental strand, 20893699 - 20893638
Alignment:
Q  2 atacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 63  Q
    |||||| || |||||||||||||||||||||||| ||||||||   ||||| ||||||||||    
T  20893699 atacaattatcatcaattcatgcatacaaacatatcatcacagttggagcaagaatttagca 20893638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 2 - 63
Target Start/End: Original strand, 20531634 - 20531695
Alignment:
Q  2 atacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 63  Q
    |||||| || ||||||||||||||||||||||||  ||||||    ||||||||||||||||    
T  20531634 atacaattatcatcaattcatgcatacaaacatattatcacatttggagcacgaatttagca 20531695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 2 - 63
Target Start/End: Complemental strand, 37844523 - 37844462
Alignment:
Q  2 atacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 63  Q
    |||||| || |||||||||||||||||||||||| ||||| ||   ||||| ||||||||||    
T  37844523 atacaattatcatcaattcatgcatacaaacatatcatcatagttggagcatgaatttagca 37844462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 2 - 63
Target Start/End: Original strand, 41394412 - 41394473
Alignment:
Q  2 atacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 63  Q
    |||||| || |||||||| ||||||||||||||| ||||| ||   ||||||||||||||||    
T  41394412 atacaattatcatcaatttatgcatacaaacatatcatcatagttggagcacgaatttagca 41394473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 132; Significance: 1e-68; HSPs: 2)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 2 - 215
Target Start/End: Original strand, 43188 - 43400
Alignment:
Q  2 atacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgag-a 100  Q
    |||||| || |||||||||||||||| |||||||||||| ||||||||||||||||||  ||||||||| |||||||||||||||||||||||||||| |    
T  43188 atacaattatcatcaattcatgcatagaaacataacatcccagcaagagcacgaatttgacatgaattgctcatcaacccattttcatacaacatgagaa 43287  T
Q  101 atatgcaaaattatacatgattatgataatcactaacccccttacctttgaagatgattatccttaatcctagcttcacttcagcctctaggtcacccac 200  Q
    | |||||||||  |||||| || ||||| | |||||||||||||||||||||| |||||||||||||||||||||||||||||||  |||| ||||||||    
T  43288 aaatgcaaaat--tacatgtttgtgatagtaactaacccccttacctttgaagttgattatccttaatcctagcttcacttcagctcctagatcacccac 43385  T
Q  201 ttgattcctcaagct 215  Q
    |||||||||||||||    
T  43386 ttgattcctcaagct 43400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076; HSP #2
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 12 - 215
Target Start/End: Original strand, 39304 - 39509
Alignment:
Q  12 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaatatgcaaa-a 110  Q
    |||||||||| ||| |  || ||| |||||||||||||||||||||||| ||  ||||||||| |||||||||||||||||||||||||| ||||||| |    
T  39304 catcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgagaaaatgcaaaga 39403  T
Q  111 ttatacatgattatgataatcactaacccccttacctttgaagatgattatccttaatcctagcttcacttcagcctctaggtcaccc-acttgattcct 209  Q
    || ||||||||||||||||| |||||||||||||||||||||| ||||||||  ||| ||| |||||| ||||||  ||||||||||| | ||||||||     
T  39404 ttgtacatgattatgataataactaacccccttacctttgaagttgattatctctaacccttgcttcaattcagctcctaggtcacccaaattgattccc 39503  T
Q  210 caagct 215  Q
    ||||||    
T  39504 caagct 39509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 127; Significance: 9e-66; HSPs: 2)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 37 - 206
Target Start/End: Original strand, 29388 - 29558
Alignment:
Q  37 catcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaatatgcaaa-attatacatgattatgataatcacta 135  Q
    |||||||||||||||||||||||| ||  |||||||||||||||||||||||||||||||||||| ||||||| ||| ||||||||||||||||| ||||    
T  29388 catcacagcaagagcacgaatttaacaacaattgttcatcaacccattttcatacaacatgagaaaatgcaaagattgtacatgattatgataataacta 29487  T
Q  136 acccccttacctttgaagatgattatccttaatcctagcttcacttcagcctctaggtcacccacttgatt 206  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  29488 acccccttacctttgaagttgattatccttaatcctagcttcacttcagctcctaggtcacccacttgatt 29558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 178 - 215
Target Start/End: Original strand, 29563 - 29600
Alignment:
Q  178 acttcagcctctaggtcacccacttgattcctcaagct 215  Q
    ||||||||  ||||||||||||||||||||||||||||    
T  29563 acttcagctcctaggtcacccacttgattcctcaagct 29600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 125; Significance: 1e-64; HSPs: 2)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 125; E-Value: 1e-64
Query Start/End: Original strand, 12 - 215
Target Start/End: Complemental strand, 21167 - 20963
Alignment:
Q  12 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaatatgcaaaat 111  Q
    |||||||| ||| ||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||    
T  21167 catcaattaatggatacaaacataacatcacaacaagagcacgaatttagcaagaattgttcatcaacccattttcatacaacatgagaaaatgcaaaat 21068  T
Q  112 tatacatgattatgataatcactaacccccttacctttgaagatgattatccttaatcctagcttcacttcagcctctaggtca-cccacttgattcctc 210  Q
    | ||||||||||||||||| |||||||||||||||||||||||||||||  | ||| ||| |||||| ||||||  |||| | | |||| ||||||||||    
T  21067 tgtacatgattatgataataactaacccccttacctttgaagatgattaatcctaacccttgcttcaattcagctcctagcttaccccaattgattcctc 20968  T
Q  211 aagct 215  Q
    |||||    
T  20967 aagct 20963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139; HSP #2
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 12 - 215
Target Start/End: Complemental strand, 14112 - 13909
Alignment:
Q  12 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaatatgcaaaat 111  Q
    |||||||||||||||||| ||||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||||||||||||||||| |||||||||    
T  14112 catcaattcatgcatacagacataacatcacagcaagagcacga-tttagcaagaattgtgcatcaacccattttcatacaacatgagaaaatgcaaaat 14014  T
Q  112 tatacatgattatgataatcactaacccccttacctttgaagatgattatccttaatcctagcttcacttcagcctctaggtca-cccacttgattcctc 210  Q
    | ||||||||||||||||| |||||||||||||||||||||||||||||  | ||| ||| |||||| ||||||  |||| | | |||| ||||||||||    
T  14013 tgtacatgattatgataataactaacccccttacctttgaagatgattaatcctaacccttgcttcaattcagctcctagcttaccccaattgattcctc 13914  T
Q  211 aagct 215  Q
    |||||    
T  13913 aagct 13909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0529 (Bit Score: 115; Significance: 1e-58; HSPs: 1)
Name: scaffold0529
Description:

Target: scaffold0529; HSP #1
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 2 - 160
Target Start/End: Original strand, 3153 - 3311
Alignment:
Q  2 atacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaa 101  Q
    |||||| || |||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  3153 atacaattatcatcaattcatggatacaaacataacatcacagcaagagcacgaatttagcaagaattgttcatcaacccattttcatacaacatgagaa 3252  T
Q  102 tatgcaaaattatacatgattatgataatcactaacccccttacctttgaagatgatta 160  Q
     |||||||||| ||||| ||||||||||| | ||||||||||||||| ||||| |||||    
T  3253 aatgcaaaattgtacataattatgataataattaacccccttaccttagaagaagatta 3311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 108; Significance: 2e-54; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 16 - 215
Target Start/End: Complemental strand, 64570 - 64372
Alignment:
Q  16 aattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaatatgcaaaattata 115  Q
    |||||||||||| |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||| | |||||||| | ||    
T  64570 aattcatgcatataaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaaaaat-ta 64472  T
Q  116 catgattatgataatcactaacccccttacctttgaagatgattatccttaatcctagcttcacttcagcctctaggtcacccacttgattcctcaagct 215  Q
    ||||||| ||||||| ||||||||||||||||| ||||| ||||| ||  ||  || |||||| ||||||  ||| |||||||||||||||||| |||||    
T  64471 catgattgtgataataactaacccccttaccttagaagaagattaacccaaactcttgcttcaattcagctcctaagtcacccacttgattccttaagct 64372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 2 - 148
Target Start/End: Original strand, 107937 - 108084
Alignment:
Q  2 atacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaa 101  Q
    |||||| || |||||||||||||||||||||||| ||| ||||   |||||||||||||| |  ||||||||||||||||||||||||||||||||||||    
T  107937 atacaattatcatcaattcatgcatacaaacatatcattacagttggagcacgaatttagtaacaattgttcatcaacccattttcatacaacatgagaa 108036  T
Q  102 tatgc-aaaattatacatgattatgataatcactaacccccttacctt 148  Q
     |||| ||||||  |||||||||| || || |||||||||||||||||    
T  108037 aatgcaaaaattgaacatgattataatgataactaacccccttacctt 108084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215 (Bit Score: 100; Significance: 1e-49; HSPs: 2)
Name: scaffold0215
Description:

Target: scaffold0215; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 2 - 148
Target Start/End: Complemental strand, 9410 - 9266
Alignment:
Q  2 atacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaa 101  Q
    |||||| || |||||||||||||||||||||||||||||||||||| |||||||||||  |||||||||||||||||||||||||||||||||||||| |    
T  9410 atacaattatcatcaattcatgcatacaaacataacatcacagcaaaagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagca 9311  T
Q  102 tatgcaaaattatacatgattatgataatcactaacccccttacctt 148  Q
     |||||||||  ||||||||| ||||||| |||||||||||||||||    
T  9310 aatgcaaaat--tacatgattgtgataataactaacccccttacctt 9266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215; HSP #2
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 2 - 148
Target Start/End: Complemental strand, 16308 - 16164
Alignment:
Q  2 atacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaa 101  Q
    |||||| || |||||||||||||||||||||||||||||||||||| |||||||||||  |||||||||||||||||||||||||||||||||||||| |    
T  16308 atacaattatcatcaattcatgcatacaaacataacatcacagcaaaagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagca 16209  T
Q  102 tatgcaaaattatacatgattatgataatcactaacccccttacctt 148  Q
     |||||||||  ||||||||| ||||||| |||||||||||||||||    
T  16208 aatgcaaaat--tacatgattgtgataataactaacccccttacctt 16164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 98; Significance: 2e-48; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 12 - 160
Target Start/End: Original strand, 236 - 381
Alignment:
Q  12 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaatatgcaaaat 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||| |||||||| | |||||||||    
T  236 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatataacatgagca-atgcaaaat 334  T
Q  112 tatacatgattatgataatcactaacccccttacctttgaagatgatta 160  Q
      ||||||||| ||||||| ||||||||||||||||| ||||| |||||    
T  335 --tacatgattttgataataactaacccccttaccttagaagaagatta 381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 98; Significance: 2e-48; HSPs: 2)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 12 - 215
Target Start/End: Original strand, 31510 - 31715
Alignment:
Q  12 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaatatgcaaa-a 110  Q
    |||||||||| ||| |  || ||| |||||||||||||||||||||||| ||  ||||||||| |||||||||||||||||||||||||| ||||||| |    
T  31510 catcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgagaaaatgcaaaga 31609  T
Q  111 ttatacatgattatgataatcactaacccccttacctttgaagatgattatccttaatcctagcttcacttcagcctctaggtcaccc-acttgattcct 209  Q
    || ||||||||||||||||| |||||||||||||||||||||| ||||||||  ||| ||| |||||| ||||||  ||||||||||| | ||||||||     
T  31610 ttgtacatgattatgataataactaacccccttacctttgaagttgattatctctaacccttgcttcaattcagctcctaggtcacccaaattgattccc 31709  T
Q  210 caagct 215  Q
    ||||||    
T  31710 caagct 31715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 12 - 100
Target Start/End: Original strand, 39847 - 39935
Alignment:
Q  12 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    |||||||||||||| |  || |||  ||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  39847 catcaattcatgcacaggaaaatagaatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgaga 39935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 97; Significance: 8e-48; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 2 - 185
Target Start/End: Original strand, 3913 - 4097
Alignment:
Q  2 atacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaa 101  Q
    |||||| || |||||||||||||| |  || ||| ||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  3913 atacaattatcatcaattcatgcacaagaaaatagcatcacaacaagagcacgaatttagcaagaattgttcatcaacccattttcatacaacatgagaa 4012  T
Q  102 tatgc-aaaattatacatgattatgataatcactaacccccttacctttgaagatgattatccttaatcctagcttcacttcagc 185  Q
     |||| |||||| ||||||||||||||||| ||||| ||||||||||| ||||||||||| || |||  || |||||| ||||||    
T  4013 aatgcaaaaattgtacatgattatgataataactaaaccccttaccttagaagatgattaaccctaactcttgcttcaattcagc 4097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 97; Significance: 8e-48; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 2 - 185
Target Start/End: Complemental strand, 5277 - 5093
Alignment:
Q  2 atacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaa 101  Q
    |||||| || |||||||||||||| |  || ||| |||||||||||||||||||||||| || |||||||||||||||||||||||||||||| ||||||    
T  5277 atacaattatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacaagaattgttcatcaacccattttcatacaacgtgagaa 5178  T
Q  102 tatgc-aaaattatacatgattatgataatcactaacccccttacctttgaagatgattatccttaatcctagcttcacttcagc 185  Q
     |||| |||||| ||||||||||||||||| |||||| |||||||||||||||||||||| || |||  || |||||| ||||||    
T  5177 aatgcaaaaattgtacatgattatgataataactaactcccttacctttgaagatgattaaccctaactcttgcttcaattcagc 5093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 94; Significance: 5e-46; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 37 - 185
Target Start/End: Complemental strand, 10778 - 10629
Alignment:
Q  37 catcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaatatgc-aaaattatacatgattatgataatcacta 135  Q
    ||||||| |||||||||||||||||||  |||||||||||||||||||||||||||||||||||| |||| |||||| ||||||||||||||||| ||||    
T  10778 catcacaacaagagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaattgtacatgattatgataataacta 10679  T
Q  136 acccccttacctttgaagatgattatccttaatcctagcttcacttcagc 185  Q
    ||||||||||||||||||||||||| || |||  || |||||| ||||||    
T  10678 acccccttacctttgaagatgattaaccctaactcttgcttcaattcagc 10629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0191 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0191
Description:

Target: scaffold0191; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 14 - 215
Target Start/End: Complemental strand, 7509 - 7306
Alignment:
Q  14 tcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaatatgc-aaaatt 112  Q
    |||||||||||| |  || ||| ||||||| ||||||||||||||||| |  |||||||||||||||||||||||||||||||||||| |||| |||||     
T  7509 tcaattcatgcacaagaaaatagcatcacaacaagagcacgaatttagtaataattgttcatcaacccattttcatacaacatgagaaaatgcaaaaatg 7410  T
Q  113 atacatgattatgataatcactaacccccttacctttgaagatgattatccttaatcctagcttcacttcagcctctaggtca-cccacttgattcctca 211  Q
      |||||||||||||||| ||||||||||||||||||||||| ||||| || |||| || |||||| ||||||  |||| | | |||| |||||||||||    
T  7409 gaacatgattatgataataactaacccccttacctttgaagaagattaaccctaattcttgcttcaattcagctcctagcttaccccaattgattcctca 7310  T
Q  212 agct 215  Q
    ||||    
T  7309 agct 7306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1500 (Bit Score: 87; Significance: 7e-42; HSPs: 1)
Name: scaffold1500
Description:

Target: scaffold1500; HSP #1
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 12 - 185
Target Start/End: Complemental strand, 1569 - 1395
Alignment:
Q  12 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaatatgc-aaaa 110  Q
    |||||||||||||| |  || ||| ||| ||| |||||||||||||||||||  |||||||||||||||||||||||||||||||||||| |||| ||||    
T  1569 catcaattcatgcacaagaaaatagcattacaacaagagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaa 1470  T
Q  111 ttatacatgattatgataatcactaacccccttacctttgaagatgattatccttaatcctagcttcacttcagc 185  Q
    || ||||||||||||||||| ||||||||||||||||| ||||| ||||| ||| ||  || |||||| ||||||    
T  1469 ttgtacatgattatgataataactaacccccttaccttagaagaagattaacctaaactcttgcttcaattcagc 1395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383 (Bit Score: 84; Significance: 4e-40; HSPs: 1)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 12 - 160
Target Start/End: Original strand, 2593 - 2743
Alignment:
Q  12 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaatatgcaaaa- 110  Q
    |||||||||||||| |  || ||| |||||| ||||||||||||||| ||||  |||||||||||||||||||||||||||||||||||| ||||||||     
T  2593 catcaattcatgcacaagaaaatagcatcacggcaagagcacgaattgagcaacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaa 2692  T
Q  111 -ttatacatgattatgataatcactaacccccttacctttgaagatgatta 160  Q
     || ||||||||||||||||| ||||||||||||||||| ||||| |||||    
T  2693 tttgtacatgattatgataataactaacccccttaccttagaagaagatta 2743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0761 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0761
Description:

Target: scaffold0761; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 12 - 185
Target Start/End: Complemental strand, 1630 - 1456
Alignment:
Q  12 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaatatgc-aaaa 110  Q
    |||||||||||||| |  || ||| |||||||||||| |||||| |||||||  |||||||||||||||||||||||||||||||||||| |||| ||||    
T  1630 catcaattcatgcacaagaaaatagcatcacagcaagtgcacgattttagcaacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaa 1531  T
Q  111 ttatacatgattatgataatcactaacccccttacctttgaagatgattatccttaatcctagcttcacttcagc 185  Q
    ||  |||||||||||||||| ||||||||||||||||| ||||| ||||| ||  || ||| |||||| ||||||    
T  1530 ttgaacatgattatgataataactaacccccttaccttagaagaagattaacccaaacccttgcttcaattcagc 1456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0183 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0183
Description:

Target: scaffold0183; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 45 - 207
Target Start/End: Original strand, 6831 - 6994
Alignment:
Q  45 caagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaatatgcaaaattataca-tgattatgataatcactaaccccctt 143  Q
    |||||||||||||||  |||||||||||||||||||||||||||||||||||||||| ||| ||||||  | | ||||||||||||| ||||||||||||    
T  6831 caagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagaagatgtaaaatttgaaattgattatgataataactaaccccctt 6930  T
Q  144 acctttgaagatgattatccttaatcctagcttcacttcagcctctaggtcacccacttgattc 207  Q
    ||||| ||||| ||||| ||  ||  || |||||| ||||||  ||| ||||||||||||||||    
T  6931 accttagaagaagattaacccaaactcttgcttcaattcagctcctaagtcacccacttgattc 6994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0467 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0467
Description:

Target: scaffold0467; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 12 - 160
Target Start/End: Complemental strand, 10394 - 10245
Alignment:
Q  12 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaatatgc-aaaa 110  Q
    |||||||||||||| |  || ||| |||||||||||||||||||||||||||  |||| ||||||||||||||||||||||||||||||| |||| ||||    
T  10394 catcaattcatgcacaagaaaatatcatcacagcaagagcacgaatttagcaacaattattcatcaacccattttcatacaacatgagaaaatgcaaaaa 10295  T
Q  111 ttatacatgattatgataatcactaacccccttacctttgaagatgatta 160  Q
    ||  ||||||||||||  |  || |||||||||||||| || ||||||||    
T  10294 ttgaacatgattatgaagaagacaaacccccttaccttagatgatgatta 10245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 62; Significance: 6e-27; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 47 - 215
Target Start/End: Complemental strand, 23769 - 23600
Alignment:
Q  47 agagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaatatgcaaaattataca-tgattatgataatcactaacccccttac 145  Q
    |||||||||||||  ||||| |||||||||||||||||||||||||||||||||| ||| ||||||  | | ||| ||||||||| |||||||||||||     
T  23769 agagcacgaatttgacatgagttgttcatcaacccattttcatacaacatgagaagatgtaaaatttgaaattgaatatgataataactaacccccttaa 23670  T
Q  146 ctttgaagatgattatccttaatcctagcttcacttcagcctctaggtcacccacttgattcctcaagct 215  Q
    ||| ||||| ||||| ||  ||  || |||||| |||||   ||| |||||||||||||||||| |||||    
T  23669 cttagaagaagattaacccaaactcttgcttcaattcagttcctaagtcacccacttgattcctaaagct 23600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 12 - 110
Target Start/End: Original strand, 54075 - 54173
Alignment:
Q  12 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaatatgcaaaa 110  Q
    |||||||||||||| |  || | | |||||||| ||||||||||||||||||| ||||||||||||||||||||||||| |||||||||| ||||||||    
T  54075 catcaattcatgcacaagaaaacagcatcacagtaagagcacgaatttagcatcaattgttcatcaacccattttcataaaacatgagaaaatgcaaaa 54173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0892 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0892
Description:

Target: scaffold0892; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 35 - 110
Target Start/End: Original strand, 3637 - 3712
Alignment:
Q  35 aacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaatatgcaaaa 110  Q
    |||||||||| |||||||| |||||||||| ||||||||||||||||||||||||| |||||||||| ||||||||    
T  3637 aacatcacagtaagagcactaatttagcatcaattgttcatcaacccattttcataaaacatgagaaaatgcaaaa 3712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 55; Significance: 9e-23; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 12 - 148
Target Start/End: Complemental strand, 34213 - 34076
Alignment:
Q  12 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaac-atgagaatatgc-aaa 109  Q
    |||||||||||||| |  || ||| | |||||||||||||||||||||||||  |||| |||||||||||| ||||||||||| ||||||| |||| |||    
T  34213 catcaattcatgcacaagaaaatagcttcacagcaagagcacgaatttagcaacaatttttcatcaaccca-tttcatacaacaatgagaaaatgcaaaa 34115  T
Q  110 attatacatgattatgataatcactaacccccttacctt 148  Q
    |||  ||||||||||||| |  |||||||||||||||||    
T  34114 attgaacatgattatgatgaagactaacccccttacctt 34076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 63
Target Start/End: Complemental strand, 247515 - 247454
Alignment:
Q  2 atacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 63  Q
    |||||| || |||||||||||||||||||||||| ||| ||||   ||||||||||||||||    
T  247515 atacaattatcatcaattcatgcatacaaacatatcattacagttggagcacgaatttagca 247454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516 (Bit Score: 54; Significance: 3e-22; HSPs: 1)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 45 - 148
Target Start/End: Complemental strand, 12149 - 12045
Alignment:
Q  45 caagagcacgaatttagcatgaattgttcatcaacccattttcatacaa-catgagaatatgcaaaattataca-tgattatgataatcactaaccccct 142  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||||| |||||||| ||| ||||||  | | ||||||||||||| |||||||||||    
T  12149 caagagcacgaatttaacatcaattgttcatcaacccattttcatacaaccatgagaa-atgaaaaatttgaaattgattatgataataactaaccccct 12051  T
Q  143 tacctt 148  Q
    ||||||    
T  12050 tacctt 12045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 53; Significance: 1e-21; HSPs: 2)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 2 - 148
Target Start/End: Original strand, 45221 - 45369
Alignment:
Q  2 atacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaac-atgaga 100  Q
    |||||| || |||||||||||||| |  || ||| ||||||| |||| ||||||||||| ||  |||| |||||||||||||||||||||||| ||||||    
T  45221 atacaattatcatcaattcatgcacatcaaaatagcatcacaacaagggcacgaatttaacaacaattattcatcaacccattttcatacaacaatgaga 45320  T
Q  101 atatgcaa-aattatacatgattatgataatcactaacccccttacctt 148  Q
    |  ||||| ||||  ||||||||||||| |  |||||||||||||||||    
T  45321 aattgcaataattgaacatgattatgatgaagactaacccccttacctt 45369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066; HSP #2
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 2 - 148
Target Start/End: Original strand, 54607 - 54755
Alignment:
Q  2 atacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaac-atgaga 100  Q
    |||||| || |||||||||||||| |  || ||| ||||||||||||  |||||||||| ||  |||| |||||||||||||||||||||||| ||||||    
T  54607 atacaattatcatcaattcatgcacaagaaaatagcatcacagcaaggacacgaatttaacaacaattattcatcaacccattttcatacaacaatgaga 54706  T
Q  101 atatgcaa-aattatacatgattatgataatcactaacccccttacctt 148  Q
    |  ||||| ||||  ||||||||||||| |  ||||||| |||||||||    
T  54707 aattgcaataattgaacatgattatgatgaagactaaccaccttacctt 54755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 45 - 148
Target Start/End: Original strand, 7443 - 7547
Alignment:
Q  45 caagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaatatgcaaaattataca-tgattatgataatcactaaccccctt 143  Q
    |||||||||||||||  |||||||||||||||||||||||||||||||||||||||| ||| ||||||  | | |||||||||| |  || |||||||||    
T  7443 caagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagaagatgtaaaatttgaaattgattatgatgaaaacaaaccccctt 7542  T
Q  144 acctt 148  Q
    |||||    
T  7543 acctt 7547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 52; Significance: 5e-21; HSPs: 2)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 117 - 215
Target Start/End: Original strand, 130880 - 130979
Alignment:
Q  117 atgattatgataatcactaacccccttacctttgaagatgattatccttaatcctagcttcacttcagcctctaggtca-cccacttgattcctcaagct 215  Q
    |||||||||||||  |||||||||||||||||||||||||||||| | ||| ||| |||||| ||||||  |||||||| |||| |||||||||||||||    
T  130880 atgattatgataaagactaacccccttacctttgaagatgattatgcctaacccttgcttcaattcagctcctaggtcaccccaattgattcctcaagct 130979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 63
Target Start/End: Complemental strand, 89527 - 89466
Alignment:
Q  2 atacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 63  Q
    |||||| || |||||||||||||||||||| ||| ||||||||   ||||||||||||||||    
T  89527 atacaattatcatcaattcatgcatacaaatatatcatcacagttggagcacgaatttagca 89466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 2 - 63
Target Start/End: Complemental strand, 34533 - 34472
Alignment:
Q  2 atacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 63  Q
    |||||| || |||||||||||||||||||||||||||||||||  |||||||||||||||||    
T  34533 atacaattatcatcaattcatgcatacaaacataacatcacagttagagcacgaatttagca 34472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 2 - 69
Target Start/End: Original strand, 3380 - 3447
Alignment:
Q  2 atacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaatt 69  Q
    |||||| || ||| ||||||||||||||||| |||||||||||| |||||||||||||||||| ||||    
T  3380 atacaaatatcattaattcatgcatacaaacttaacatcacagctagagcacgaatttagcatcaatt 3447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 60
Target Start/End: Original strand, 41838 - 41896
Alignment:
Q  2 atacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaattta 60  Q
    |||||| || |||||||||||||||||||||||||||||||||  ||||||||||||||    
T  41838 atacaattatcatcaattcatgcatacaaacataacatcacagttagagcacgaattta 41896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 2 - 148
Target Start/End: Complemental strand, 6137 - 5991
Alignment:
Q  2 atacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaaca--tgag 99  Q
    |||||| || |||||||||||||||||||||||| ||||||||   ||||||||||||||||  |||| | ||| | | ||  |||||||||||  ||||    
T  6137 atacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccataatcaca-attcatacaacatttgag 6039  T
Q  100 aatatgcaaaattatacatgattatgataatcactaacccccttacctt 148  Q
    ||| |||||| | | | |||||||||||||  |||||||||||||||||    
T  6038 aatttgcaaagtga-aaatgattatgataaagactaacccccttacctt 5991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 2 - 63
Target Start/End: Original strand, 12303 - 12364
Alignment:
Q  2 atacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 63  Q
    |||||| || |||||||||||||||||||||||| ||||||||  |||||||||||||||||    
T  12303 atacaattatcatcaattcatgcatacaaacatatcatcacagttagagcacgaatttagca 12364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 2 - 160
Target Start/End: Complemental strand, 1029 - 871
Alignment:
Q  2 atacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaaca--tgag 99  Q
    |||||| || |||||||||||||||||||||||| ||||||||   ||||||||||||||||  |||| | ||| | | ||  |||||||||||  ||||    
T  1029 atacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccataatcaca-attcatacaacatttgag 931  T
Q  100 aatatgcaaaattatacatgattatgataatcactaacccccttacctttgaagatgatta 160  Q
    ||| || ||| | | | |||||||||||||  ||||||||||||||||| ||||| |||||    
T  930 aatttgtaaagtga-agatgattatgataaagactaacccccttaccttagaagaagatta 871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 2)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 2 - 63
Target Start/End: Complemental strand, 8253 - 8192
Alignment:
Q  2 atacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 63  Q
    |||||| || || ||||||||||||||||||||||||||||||  |||||||||||||||||    
T  8253 atacaattatcaccaattcatgcatacaaacataacatcacagttagagcacgaatttagca 8192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 26487 - 26427
Alignment:
Q  3 tacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 63  Q
    ||||| || |||||||||| ||||||||||||| ||||| ||   ||||||||||||||||    
T  26487 tacaattatcatcaattcacgcatacaaacatatcatcaaagttggagcacgaatttagca 26427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 2 - 63
Target Start/End: Original strand, 13696 - 13757
Alignment:
Q  2 atacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 63  Q
    |||||| || |||||||||||||||||||||||||||||| ||  |||||||||||||||||    
T  13696 atacaattatcatcaattcatgcatacaaacataacatcaaagttagagcacgaatttagca 13757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0367 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0367
Description:

Target: scaffold0367; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 117 - 215
Target Start/End: Complemental strand, 17241 - 17142
Alignment:
Q  117 atgattatgataatcactaacccccttacctttgaagatgattatccttaatcctagcttcacttcagcctctaggtca-cccacttgattcctcaagct 215  Q
    ||||||||||| |  ||||||||||||||||| |||||| ||||| | ||| ||| |||||| ||||||  |||||||| |||| |||||||||||||||    
T  17241 atgattatgatgaagactaacccccttaccttagaagattattattcctaacccttgcttcaattcagctcctaggtcaccccaattgattcctcaagct 17142  T

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Target: scaffold0032 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 74 - 148
Target Start/End: Complemental strand, 13342 - 13268
Alignment:
Q  74 atcaacccattttcatacaacatgagaatatgcaaaa-ttatacatgattatgataatcactaacccccttacctt 148  Q
    |||||||||||| ||||||||||||||| |||||||| ||  ||||||||||||| || |||||||||||||||||    
T  13342 atcaacccattt-catacaacatgagaaaatgcaaaaattgaacatgattatgatgataactaacccccttacctt 13268  T

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Target: scaffold1542 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold1542
Description:

Target: scaffold1542; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 63
Target Start/End: Complemental strand, 607 - 546
Alignment:
Q  2 atacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 63  Q
    |||||| || |||||||||||||||||||||||| ||||||||   ||||||||||||||||    
T  607 atacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagca 546  T

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Target: scaffold0266 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 63
Target Start/End: Complemental strand, 3655 - 3594
Alignment:
Q  2 atacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 63  Q
    |||||| || |||||||||||||||||||||||| ||||||||   ||||||||||||||||    
T  3655 atacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagca 3594  T

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Target: scaffold0025 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 63
Target Start/End: Original strand, 9039 - 9100
Alignment:
Q  2 atacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 63  Q
    |||||| || |||||||||||||||||||||||| ||||||||   ||||||||||||||||    
T  9039 atacaattatcatcaattcatgcatacaaacatatcatcacagatggagcacgaatttagca 9100  T

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Target: scaffold0025; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 44
Target Start/End: Original strand, 148912 - 148953
Alignment:
Q  3 tacaactaacatcaattcatgcatacaaacataacatcacag 44  Q
    ||||| || |||||||||||||||||||||||| ||||||||    
T  148912 tacaattatcatcaattcatgcatacaaacatatcatcacag 148953  T

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Target: scaffold0195 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0195
Description:

Target: scaffold0195; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 19397 - 19457
Alignment:
Q  3 tacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 63  Q
    ||||| || |||||||||||||||||||||||| ||||||||   ||||||||||||||||    
T  19397 tacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagca 19457  T

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Target: scaffold0195; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 21481 - 21541
Alignment:
Q  3 tacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 63  Q
    ||||| || |||||||||||||||||||||||| ||||||||   ||||||||||||||||    
T  21481 tacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagca 21541  T

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Target: scaffold0772 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0772
Description:

Target: scaffold0772; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 63
Target Start/End: Original strand, 5729 - 5780
Alignment:
Q  12 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 63  Q
    |||||||||||||||||||||||||||||| ||   ||||||||||||||||    
T  5729 catcaattcatgcatacaaacataacatcaaagttggagcacgaatttagca 5780  T

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Target: scaffold0106 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 63
Target Start/End: Original strand, 41929 - 41980
Alignment:
Q  12 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 63  Q
    |||||||||||||||||||||||| ||||||||   ||||||||||||||||    
T  41929 catcaattcatgcatacaaacatatcatcacagttggagcacgaatttagca 41980  T

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Target: scaffold0013 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 124 - 215
Target Start/End: Complemental strand, 154373 - 154282
Alignment:
Q  124 tgataatcactaacccccttacctttgaagatgattatccttaatcctagcttcacttcagcctctaggtcacccacttgattcctcaagct 215  Q
    ||||||| ||||||||||||||||| ||||| ||||| ||  ||  || |||||| ||||||  ||| |||||||||||||||||| |||||    
T  154373 tgataataactaacccccttaccttagaagaagattaacccaaactcttgcttcaattcagctcctaagtcacccacttgattcctaaagct 154282  T

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Target: scaffold0077 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 60
Target Start/End: Complemental strand, 36985 - 36928
Alignment:
Q  3 tacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaattta 60  Q
    ||||| || |||||||||||||||||||||||| ||||||||   |||||||||||||    
T  36985 tacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacgaattta 36928  T

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Target: scaffold0049 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 63
Target Start/End: Original strand, 48377 - 48438
Alignment:
Q  2 atacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 63  Q
    |||||| || |||||||||||||||||||||||| ||| ||||   ||||||||||||||||    
T  48377 atacaattatcatcaattcatgcatacaaacatatcattacagttggagcacgaatttagca 48438  T

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Target: scaffold0011 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 63
Target Start/End: Complemental strand, 123237 - 123176
Alignment:
Q  2 atacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 63  Q
    |||||| || |||||||||||||||||||||||| |||||||    ||||||||||||||||    
T  123237 atacaattatcatcaattcatgcatacaaacatatcatcacaattggagcacgaatttagca 123176  T

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Target: scaffold0498 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0498
Description:

Target: scaffold0498; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 9069 - 9129
Alignment:
Q  3 tacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 63  Q
    ||||| || |||| |||||||||||||||||||||||||||    ||||||||||||||||    
T  9069 tacaattatcatcgattcatgcatacaaacataacatcacaaatggagcacgaatttagca 9129  T

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Target: scaffold0018 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 51254 - 51194
Alignment:
Q  3 tacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 63  Q
    ||||| || |||||||||||||||||||| ||| ||||||||   ||||||||||||||||    
T  51254 tacaattatcatcaattcatgcatacaaatatatcatcacagttggagcacgaatttagca 51194  T

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Target: scaffold0141 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 63
Target Start/End: Original strand, 22741 - 22791
Alignment:
Q  13 atcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 63  Q
    ||||||||||||||||||||||| ||||| ||   ||||||||||||||||    
T  22741 atcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 22791  T

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Target: scaffold0141; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 63
Target Start/End: Original strand, 26996 - 27046
Alignment:
Q  13 atcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 63  Q
    ||||||||||||||||||||||| ||||| ||   ||||||||||||||||    
T  26996 atcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 27046  T

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Target: scaffold0124 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 63
Target Start/End: Complemental strand, 1644 - 1594
Alignment:
Q  13 atcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 63  Q
    ||||||||||||||||||||||| ||||| ||   ||||||||||||||||    
T  1644 atcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 1594  T

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Target: scaffold0078 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 63
Target Start/End: Complemental strand, 37128 - 37078
Alignment:
Q  13 atcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 63  Q
    ||||||||||||||||||||||| ||||| ||   ||||||||||||||||    
T  37128 atcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 37078  T

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Target: scaffold0001 (Bit Score: 30; Significance: 0.00000007; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 2 - 63
Target Start/End: Original strand, 172095 - 172156
Alignment:
Q  2 atacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 63  Q
    |||||| || ||||||||||| |||||||||||| ||||||||   ||||||| ||||||||    
T  172095 atacaattatcatcaattcatccatacaaacatatcatcacagttggagcacgtatttagca 172156  T

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Target: scaffold0001; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 2 - 63
Target Start/End: Original strand, 177798 - 177859
Alignment:
Q  2 atacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 63  Q
    |||||| || ||||||||||| |||||||||||| ||||||||   ||||||| ||||||||    
T  177798 atacaattatcatcaattcatccatacaaacatatcatcacagttggagcacgtatttagca 177859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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