View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16146_high_7 (Length: 336)
Name: NF16146_high_7
Description: NF16146
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16146_high_7 |
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Alignment Details
Target: chr8 (Bit Score: 282; Significance: 1e-158; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 7 - 317
Target Start/End: Complemental strand, 13214072 - 13213764
Alignment:
| Q |
7 |
ctgaaaagaaggtgcatatagctgagagaaagaggcagtagtaaagaccaaggtttaagaattaagatagtgagtaaggttttttaccctattagtgaaa |
106 |
Q |
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| T |
13214072 |
ctgaaaagaaggtgcatatagctgagagaaagaggcagtagtaaagaccaaggtttaagaattaagatagtgagtaaggttttttaccctattagtgtaa |
13213973 |
T |
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| Q |
107 |
gacatatattaatgtgttcttatttgcagcttttccaatatagaagaagaaacttacacatacacaaacatttacaaagacactagttataag-gagaga |
205 |
Q |
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| T |
13213972 |
gacatatattaatgtgttcttatttgcagcttttccaatatagaagaagaaacttacacatacacaaacatttacaaagacactagttataagagagaga |
13213873 |
T |
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| Q |
206 |
gaaatttcaagcatggtagtagtcttgaataaatgggacccactttgtaggtcccacaacaccgcccatgcgcacgctgtctttcttaccaatatcaaac |
305 |
Q |
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| T |
13213872 |
gaaatttcaagcatggtagta---ttgaatatatgggacccactttgtaggtcccacaacaccgcccatgcgcacgctgtctttcttaccaatatcaaac |
13213776 |
T |
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| Q |
306 |
ccatcatcgatc |
317 |
Q |
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| T |
13213775 |
ccatcatcgatc |
13213764 |
T |
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