View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16146_low_12 (Length: 283)

Name: NF16146_low_12
Description: NF16146
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16146_low_12
NF16146_low_12
[»] chr7 (37 HSPs)
chr7 (11-65)||(12006795-12006849)
chr7 (15-65)||(20458950-20459000)
chr7 (11-65)||(28218418-28218472)
chr7 (11-65)||(41600213-41600267)
chr7 (13-65)||(38879981-38880033)
chr7 (11-65)||(20419791-20419845)
chr7 (11-61)||(23704734-23704784)
chr7 (11-65)||(25772586-25772640)
chr7 (11-65)||(48672534-48672588)
chr7 (11-65)||(1250461-1250515)
chr7 (19-65)||(20458760-20458806)
chr7 (11-65)||(20963750-20963803)
chr7 (11-65)||(23383755-23383809)
chr7 (19-65)||(28218248-28218294)
chr7 (11-65)||(31851494-31851548)
chr7 (11-51)||(6465937-6465977)
chr7 (11-63)||(7658224-7658276)
chr7 (21-65)||(16995268-16995312)
chr7 (19-62)||(44816907-44816950)
chr7 (19-65)||(12006609-12006655)
chr7 (19-65)||(23704924-23704970)
chr7 (19-65)||(38879793-38879839)
chr7 (19-65)||(48648330-48648376)
chr7 (11-65)||(48648484-48648538)
chr7 (93-129)||(20963497-20963533)
chr7 (11-63)||(44817090-44817142)
chr7 (82-129)||(23383828-23383875)
chr7 (79-134)||(25772362-25772417)
chr7 (11-65)||(7658040-7658094)
chr7 (11-65)||(10409443-10409497)
chr7 (19-65)||(10409637-10409683)
chr7 (19-65)||(20419605-20419651)
chr7 (19-65)||(20963564-20963610)
chr7 (20-65)||(24194932-24194978)
chr7 (19-65)||(24195059-24195105)
chr7 (19-65)||(41600027-41600073)
chr7 (19-65)||(48672348-48672394)
[»] chr6 (23 HSPs)
chr6 (11-65)||(19284198-19284252)
chr6 (11-65)||(24732007-24732061)
chr6 (11-65)||(32017759-32017813)
chr6 (11-62)||(30459156-30459207)
chr6 (11-57)||(10321986-10322032)
chr6 (11-64)||(2299564-2299617)
chr6 (11-65)||(9481251-9481305)
chr6 (19-65)||(18500383-18500429)
chr6 (15-65)||(30618031-30618081)
chr6 (20-65)||(9481446-9481491)
chr6 (82-135)||(30617964-30618017)
chr6 (12-65)||(33637628-33637681)
chr6 (13-65)||(9854144-9854196)
chr6 (11-50)||(18500602-18500641)
chr6 (19-65)||(24732201-24732247)
chr6 (19-65)||(26385347-26385393)
chr6 (19-65)||(33714556-33714602)
chr6 (24-65)||(9154949-9154990)
chr6 (81-134)||(30458898-30458951)
chr6 (13-65)||(14680951-14681003)
chr6 (13-65)||(17142746-17142798)
chr6 (13-65)||(30458970-30459022)
chr6 (19-59)||(33637791-33637831)
[»] chr4 (38 HSPs)
chr4 (11-65)||(9619049-9619103)
chr4 (11-65)||(15640784-15640838)
chr4 (11-65)||(26252337-26252391)
chr4 (11-65)||(3018081-3018135)
chr4 (11-65)||(7819083-7819137)
chr4 (11-65)||(9516865-9516919)
chr4 (11-65)||(31090316-31090370)
chr4 (11-65)||(34064237-34064291)
chr4 (11-65)||(38574223-38574277)
chr4 (11-65)||(46046679-46046733)
chr4 (11-64)||(3273692-3273745)
chr4 (11-65)||(4355950-4356004)
chr4 (11-65)||(31944019-31944073)
chr4 (19-65)||(34064051-34064097)
chr4 (11-65)||(35376231-35376285)
chr4 (11-65)||(37012962-37013016)
chr4 (11-65)||(48580121-48580175)
chr4 (20-65)||(37012776-37012821)
chr4 (20-65)||(48579935-48579980)
chr4 (11-65)||(9396768-9396822)
chr4 (11-65)||(13132196-13132250)
chr4 (11-65)||(18713029-18713083)
chr4 (19-65)||(31090130-31090176)
chr4 (19-65)||(38574037-38574083)
chr4 (19-64)||(7819277-7819322)
chr4 (20-65)||(18713224-18713269)
chr4 (84-129)||(48260080-48260125)
chr4 (13-65)||(3273877-3273929)
chr4 (25-65)||(9396968-9397008)
chr4 (13-65)||(15640972-15641024)
chr4 (21-65)||(26252502-26252546)
chr4 (82-129)||(13132267-13132314)
chr4 (20-62)||(4356145-4356187)
chr4 (19-65)||(9516679-9516725)
chr4 (19-61)||(35376391-35376433)
chr4 (12-65)||(41947112-41947165)
chr4 (19-64)||(46046494-46046539)
chr4 (99-135)||(35376472-35376508)
[»] chr3 (42 HSPs)
chr3 (11-65)||(20853951-20854005)
chr3 (11-65)||(43572458-43572512)
chr3 (11-65)||(45969984-45970038)
chr3 (11-64)||(21632966-21633019)
chr3 (11-65)||(33372475-33372529)
chr3 (11-65)||(45003565-45003619)
chr3 (11-65)||(52552943-52552997)
chr3 (11-65)||(9267230-9267284)
chr3 (11-65)||(11003801-11003855)
chr3 (11-65)||(14161940-14161994)
chr3 (11-65)||(14171841-14171895)
chr3 (11-65)||(16722060-16722114)
chr3 (11-61)||(17465622-17465672)
chr3 (11-65)||(19113020-19113074)
chr3 (19-65)||(21633159-21633205)
chr3 (11-65)||(30500296-30500350)
chr3 (19-65)||(35995747-35995793)
chr3 (11-65)||(49986597-49986651)
chr3 (20-65)||(14262105-14262150)
chr3 (165-283)||(47575650-47575759)
chr3 (13-65)||(4204777-4204829)
chr3 (13-65)||(43572648-43572700)
chr3 (11-65)||(5800674-5800728)
chr3 (19-65)||(9267044-9267090)
chr3 (11-65)||(14262291-14262345)
chr3 (11-65)||(35995933-35995987)
chr3 (11-65)||(47575527-47575581)
chr3 (20-65)||(14162135-14162180)
chr3 (20-65)||(15328724-15328769)
chr3 (20-65)||(16722255-16722300)
chr3 (20-65)||(30500110-30500155)
chr3 (21-129)||(33372669-33372779)
chr3 (20-65)||(52552761-52552806)
chr3 (19-65)||(14171655-14171701)
chr3 (15-65)||(17649269-17649319)
chr3 (19-65)||(20853765-20853811)
chr3 (11-65)||(38283805-38283859)
chr3 (20-65)||(5800869-5800914)
chr3 (20-65)||(19112834-19112879)
chr3 (20-65)||(45058755-45058800)
chr3 (24-61)||(45970183-45970220)
chr3 (82-134)||(45970244-45970296)
[»] chr2 (29 HSPs)
chr2 (11-61)||(26236200-26236250)
chr2 (11-65)||(13254566-13254620)
chr2 (11-65)||(17850841-17850895)
chr2 (11-65)||(19251539-19251593)
chr2 (11-65)||(26135886-26135940)
chr2 (19-129)||(15106330-15106440)
chr2 (13-65)||(20499002-20499054)
chr2 (11-63)||(22263446-22263498)
chr2 (11-65)||(15106136-15106190)
chr2 (11-65)||(23854921-23854975)
chr2 (11-64)||(23806022-23806075)
chr2 (11-65)||(17463160-17463214)
chr2 (19-65)||(23806215-23806261)
chr2 (19-65)||(26236358-26236404)
chr2 (19-65)||(30390528-30390574)
chr2 (11-65)||(39878171-39878225)
chr2 (11-65)||(42670974-42671028)
chr2 (20-65)||(22263260-22263305)
chr2 (20-65)||(26560623-26560668)
chr2 (13-52)||(13254693-13254732)
chr2 (13-52)||(39878359-39878398)
chr2 (19-65)||(17850655-17850701)
chr2 (15-65)||(20498815-20498864)
chr2 (11-65)||(26560809-26560863)
chr2 (19-64)||(13284671-13284716)
chr2 (92-129)||(15106070-15106107)
chr2 (82-119)||(34548587-34548624)
chr2 (20-65)||(42670788-42670833)
chr2 (25-65)||(23854757-23854797)
[»] chr1 (32 HSPs)
chr1 (11-65)||(4907217-4907271)
chr1 (11-65)||(24467697-24467751)
chr1 (11-65)||(18462354-18462408)
chr1 (11-65)||(52058263-52058317)
chr1 (13-65)||(24467884-24467936)
chr1 (15-62)||(33628949-33628996)
chr1 (11-65)||(30299300-30299354)
chr1 (19-65)||(33628759-33628805)
chr1 (22-65)||(39826312-39826355)
chr1 (19-65)||(4907031-4907077)
chr1 (19-65)||(8293070-8293116)
chr1 (11-65)||(17606377-17606431)
chr1 (19-65)||(29696821-29696867)
chr1 (19-65)||(30299494-30299540)
chr1 (15-65)||(34749364-34749414)
chr1 (15-65)||(39711141-39711191)
chr1 (19-65)||(39826119-39826165)
chr1 (19-65)||(39970715-39970761)
chr1 (11-65)||(39970900-39970954)
chr1 (11-65)||(43539416-43539470)
chr1 (11-65)||(48072030-48072084)
chr1 (20-65)||(17606572-17606617)
chr1 (20-65)||(20995932-20995977)
chr1 (13-65)||(18462541-18462593)
chr1 (13-65)||(42510083-42510135)
chr1 (13-57)||(52058088-52058132)
chr1 (13-64)||(7473862-7473913)
chr1 (11-65)||(8292873-8292927)
chr1 (11-65)||(29696633-29696687)
chr1 (19-65)||(34749206-34749252)
chr1 (19-65)||(39711335-39711381)
chr1 (11-52)||(20995751-20995792)
[»] scaffold0809 (2 HSPs)
scaffold0809 (11-65)||(1479-1533)
scaffold0809 (19-65)||(1673-1719)
[»] scaffold0117 (1 HSPs)
scaffold0117 (11-65)||(12237-12291)
[»] chr8 (26 HSPs)
chr8 (11-65)||(10108439-10108493)
chr8 (11-65)||(14820363-14820417)
chr8 (19-65)||(10171406-10171452)
chr8 (19-65)||(26136948-26136994)
chr8 (11-65)||(30789762-30789816)
chr8 (20-65)||(21148006-21148051)
chr8 (13-65)||(42113053-42113105)
chr8 (11-65)||(2583389-2583443)
chr8 (11-65)||(17623142-17623196)
chr8 (11-65)||(21148191-21148245)
chr8 (15-65)||(42605822-42605872)
chr8 (19-65)||(43851733-43851779)
chr8 (20-65)||(5555133-5555178)
chr8 (20-65)||(10108634-10108679)
chr8 (20-65)||(14767576-14767621)
chr8 (20-65)||(14820558-14820603)
chr8 (16-61)||(18044089-18044134)
chr8 (11-63)||(5554940-5554992)
chr8 (11-51)||(7689606-7689646)
chr8 (13-65)||(30789576-30789628)
chr8 (13-52)||(22848400-22848439)
chr8 (19-61)||(7689786-7689828)
chr8 (19-65)||(22494647-22494693)
chr8 (11-65)||(26136754-26136808)
chr8 (11-65)||(42113239-42113293)
chr8 (11-60)||(43851919-43851968)
[»] chr5 (36 HSPs)
chr5 (11-65)||(7126172-7126226)
chr5 (11-65)||(24074372-24074426)
chr5 (11-65)||(41001608-41001662)
chr5 (15-65)||(994005-994055)
chr5 (11-65)||(4919245-4919299)
chr5 (11-65)||(6817376-6817430)
chr5 (11-61)||(14411770-14411820)
chr5 (11-65)||(18336537-18336591)
chr5 (82-135)||(30512285-30512338)
chr5 (82-135)||(30552625-30552678)
chr5 (20-65)||(31799709-31799754)
chr5 (13-65)||(23979158-23979210)
chr5 (19-65)||(4919059-4919105)
chr5 (11-65)||(14143970-14144024)
chr5 (15-61)||(17762355-17762401)
chr5 (11-65)||(24837424-24837478)
chr5 (11-65)||(31799895-31799949)
chr5 (20-65)||(7125986-7126031)
chr5 (20-65)||(14144165-14144210)
chr5 (20-65)||(18336720-18336765)
chr5 (11-64)||(24650954-24651007)
chr5 (20-61)||(27159063-27159104)
chr5 (20-65)||(29445070-29445115)
chr5 (13-65)||(6817191-6817243)
chr5 (13-65)||(20709281-20709333)
chr5 (22-65)||(41001422-41001465)
chr5 (19-65)||(14411929-14411975)
chr5 (19-65)||(17762545-17762591)
chr5 (11-65)||(20709467-20709521)
chr5 (19-65)||(24837238-24837284)
chr5 (11-65)||(27159212-27159266)
chr5 (11-65)||(29444875-29444929)
chr5 (19-65)||(30512356-30512402)
chr5 (19-65)||(30552696-30552742)
chr5 (20-65)||(24074566-24074611)
chr5 (13-65)||(22571146-22571198)
[»] scaffold0176 (1 HSPs)
scaffold0176 (11-63)||(15887-15939)
[»] scaffold0185 (1 HSPs)
scaffold0185 (11-51)||(4124-4164)
[»] scaffold0449 (2 HSPs)
scaffold0449 (11-65)||(7454-7508)
scaffold0449 (19-65)||(7295-7341)
[»] scaffold0141 (2 HSPs)
scaffold0141 (19-65)||(8585-8631)
scaffold0141 (11-65)||(8394-8446)
[»] scaffold0477 (1 HSPs)
scaffold0477 (19-65)||(5011-5057)
[»] scaffold0361 (2 HSPs)
scaffold0361 (15-61)||(4636-4682)
scaffold0361 (19-65)||(4826-4872)
[»] scaffold0352 (1 HSPs)
scaffold0352 (20-65)||(4736-4781)


Alignment Details
Target: chr7 (Bit Score: 47; Significance: 7e-18; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 11 - 65
Target Start/End: Original strand, 12006795 - 12006849
Alignment:
Q  11 gatgaaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||||||||||||||||||||| |||||||||||||||||| ||||||||||||    
T  12006795 gatgaaaggagggaccaaaagtggaagaatctgaaattacagggacaaaatctaa 12006849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 15 - 65
Target Start/End: Original strand, 20458950 - 20459000
Alignment:
Q  15 aaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  20458950 aaaggagggaccaaaagtggaagaatctgaaattacagtgacaaaatctaa 20459000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 11 - 65
Target Start/End: Original strand, 28218418 - 28218472
Alignment:
Q  11 gatgaaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||||||||||||||||||||| |||||||||||||||||| ||||||||||||    
T  28218418 gatgaaaggagggaccaaaagtggaagaatctgaaattacagggacaaaatctaa 28218472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 11 - 65
Target Start/End: Original strand, 41600213 - 41600267
Alignment:
Q  11 gatgaaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||||||||||||||||||||| |||||||||||||||||| ||||||||||||    
T  41600213 gatgaaaggagggaccaaaagtggaagaatctgaaattacagggacaaaatctaa 41600267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 13 - 65
Target Start/End: Original strand, 38879981 - 38880033
Alignment:
Q  13 tgaaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||||||||||||||||||| |||||||||||||||||| ||||||||||||    
T  38879981 tgaaaggagggaccaaaagtggaagaatctgaaattacagggacaaaatctaa 38880033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 65
Target Start/End: Original strand, 20419791 - 20419845
Alignment:
Q  11 gatgaaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||||||||||||||||||||  |||||||||||||||||| ||||||||||||    
T  20419791 gatgaaaggagggaccaaaagtagaagaatctgaaattacagggacaaaatctaa 20419845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 61
Target Start/End: Complemental strand, 23704784 - 23704734
Alignment:
Q  11 gatgaaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaat 61  Q
    ||||||||||||||||||||||| |||||||||||||||||| ||||||||    
T  23704784 gatgaaaggagggaccaaaagtggaagaatctgaaattacagggacaaaat 23704734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 65
Target Start/End: Original strand, 25772586 - 25772640
Alignment:
Q  11 gatgaaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||||||||||||||||||||  |||||||||||||||||| ||||||||||||    
T  25772586 gatgaaaggagggaccaaaagtagaagaatctgaaattacagggacaaaatctaa 25772640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 65
Target Start/End: Original strand, 48672534 - 48672588
Alignment:
Q  11 gatgaaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||||||||||||||||||||| |||||||||||||||||| || |||||||||    
T  48672534 gatgaaaggagggaccaaaagtggaagaatctgaaattacagggataaaatctaa 48672588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 65
Target Start/End: Original strand, 1250461 - 1250515
Alignment:
Q  11 gatgaaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||||||||||||||||||||| |||||| |||||||| || ||||||||||||    
T  1250461 gatgaaaggagggaccaaaagtggaagaatatgaaattaaagggacaaaatctaa 1250515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 65
Target Start/End: Complemental strand, 20458806 - 20458760
Alignment:
Q  19 gagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||||||||||||| |||||||||||||||||| ||||||||||||    
T  20458806 gagggaccaaaagtggaagaatctgaaattacagcgacaaaatctaa 20458760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 65
Target Start/End: Original strand, 20963750 - 20963803
Alignment:
Q  11 gatgaaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    |||||||||||| ||||||||||||||||||||||||||||| ||| ||||||||    
T  20963750 gatgaaaggagg-accaaaagtgaaagaatctgaaattacagggactaaatctaa 20963803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 65
Target Start/End: Original strand, 23383755 - 23383809
Alignment:
Q  11 gatgaaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||||||||||||||||| ||| |||||| ||||||||||| ||||||||||||    
T  23383755 gatgaaaggagggaccaaaggtggaagaatatgaaattacagggacaaaatctaa 23383809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 65
Target Start/End: Complemental strand, 28218294 - 28218248
Alignment:
Q  19 gagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||||||||||||| |||||||||||||||||| ||||||||||||    
T  28218294 gagggaccaaaagtggaagaatctgaaattacagggacaaaatctaa 28218248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 65
Target Start/End: Original strand, 31851494 - 31851548
Alignment:
Q  11 gatgaaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||||||||| ||||||||||| |||||| ||||||||||| ||||||||||||    
T  31851494 gatgaaaggagagaccaaaagtggaagaatatgaaattacagggacaaaatctaa 31851548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 11 - 51
Target Start/End: Complemental strand, 6465977 - 6465937
Alignment:
Q  11 gatgaaaggagggaccaaaagtgaaagaatctgaaattaca 51  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  6465977 gatgaaaggagggaccaaaagtggaagaatctgaaattaca 6465937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 11 - 63
Target Start/End: Original strand, 7658224 - 7658276
Alignment:
Q  11 gatgaaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaatct 63  Q
    ||||||||||| ||||||||||| |||||||| ||||||||| ||||||||||    
T  7658224 gatgaaaggagagaccaaaagtggaagaatcttaaattacagggacaaaatct 7658276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 21 - 65
Target Start/End: Complemental strand, 16995312 - 16995268
Alignment:
Q  21 gggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||||||||||| |||||||||||||||||| ||||||||||||    
T  16995312 gggaccaaaagtggaagaatctgaaattacagggacaaaatctaa 16995268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 62
Target Start/End: Complemental strand, 44816950 - 44816907
Alignment:
Q  19 gagggaccaaaagtgaaagaatctgaaattacagtgacaaaatc 62  Q
    ||||||||||||||| |||||||||||||||||| |||||||||    
T  44816950 gagggaccaaaagtggaagaatctgaaattacagggacaaaatc 44816907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 65
Target Start/End: Complemental strand, 12006655 - 12006609
Alignment:
Q  19 gagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    |||||| |||||||| |||||||||||||||||| ||||||||||||    
T  12006655 gagggatcaaaagtggaagaatctgaaattacagggacaaaatctaa 12006609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 65
Target Start/End: Original strand, 23704924 - 23704970
Alignment:
Q  19 gagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||||||||||||| |||||| ||||||||||| ||||||||||||    
T  23704924 gagggaccaaaagtggaagaatatgaaattacagggacaaaatctaa 23704970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 65
Target Start/End: Complemental strand, 38879839 - 38879793
Alignment:
Q  19 gagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||||||||||||| |||||| ||||||||||| ||||||||||||    
T  38879839 gagggaccaaaagtggaagaatatgaaattacagggacaaaatctaa 38879793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 65
Target Start/End: Complemental strand, 48648376 - 48648330
Alignment:
Q  19 gagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    |||||||||||| ||||| ||||||||||||||| ||||||||||||    
T  48648376 gagggaccaaaaatgaaaaaatctgaaattacagggacaaaatctaa 48648330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 65
Target Start/End: Original strand, 48648484 - 48648538
Alignment:
Q  11 gatgaaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||||||||||||||| ||||| |||||||| ||||||||  ||||||||||||    
T  48648484 gatgaaaggagggaccagaagtggaagaatctaaaattacatagacaaaatctaa 48648538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 93 - 129
Target Start/End: Complemental strand, 20963533 - 20963497
Alignment:
Q  93 aattcactaatattacggggacgaaaatagatattta 129  Q
    |||||||||||||||| ||||||||||||||||||||    
T  20963533 aattcactaatattacagggacgaaaatagatattta 20963497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 63
Target Start/End: Original strand, 44817090 - 44817142
Alignment:
Q  11 gatgaaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaatct 63  Q
    ||||||| |||||||||||||||||||||| |||||||| |  ||||||||||    
T  44817090 gatgaaaagagggaccaaaagtgaaagaatatgaaattataaggacaaaatct 44817142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 82 - 129
Target Start/End: Original strand, 23383828 - 23383875
Alignment:
Q  82 actaaaatcaaaattcactaatattacggggacgaaaatagatattta 129  Q
    |||||||||| |||||||||||||||| |||||||||| || ||||||    
T  23383828 actaaaatcagaattcactaatattacagggacgaaaagaggtattta 23383875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 79 - 134
Target Start/End: Complemental strand, 25772417 - 25772362
Alignment:
Q  79 gaaactaaaatcaaaattcactaatattacggggacgaaaatagatatttatcctt 134  Q
    |||||||||||| |||||| |||||||||| |||||||||| || |||||| ||||    
T  25772417 gaaactaaaatcgaaattcgctaatattacagggacgaaaagaggtatttaccctt 25772362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 65
Target Start/End: Complemental strand, 7658094 - 7658040
Alignment:
Q  11 gatgaaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    |||||||||| |||||||||||| |||||| ||||||||||  |||| |||||||    
T  7658094 gatgaaaggatggaccaaaagtgtaagaatttgaaattacatggacataatctaa 7658040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 65
Target Start/End: Complemental strand, 10409497 - 10409443
Alignment:
Q  11 gatgaaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    |||||||| |||||| ||||||  |||||||||||||||||  ||||||||||||    
T  10409497 gatgaaagaagggactaaaagtagaagaatctgaaattacaaggacaaaatctaa 10409443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 65
Target Start/End: Original strand, 10409637 - 10409683
Alignment:
Q  19 gagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    |||||| |||||||| |||||||| ||||||||| ||||||||||||    
T  10409637 gagggatcaaaagtggaagaatctaaaattacagagacaaaatctaa 10409683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 65
Target Start/End: Complemental strand, 20419651 - 20419605
Alignment:
Q  19 gagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    |||||||||||| || |||||| ||||||||||| ||||||||||||    
T  20419651 gagggaccaaaaatggaagaatatgaaattacagggacaaaatctaa 20419605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 65
Target Start/End: Complemental strand, 20963610 - 20963564
Alignment:
Q  19 gagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||||||||||||| |||||||| ||||||||| ||| ||||||||    
T  20963610 gagggaccaaaagtggaagaatctaaaattacagggactaaatctaa 20963564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 65
Target Start/End: Complemental strand, 24194978 - 24194932
Alignment:
Q  20 agggaccaaaagtgaaag-aatctgaaattacagtgacaaaatctaa 65  Q
    ||||||||||||||| || ||||||||||||||| ||||||||||||    
T  24194978 agggaccaaaagtgagaggaatctgaaattacagggacaaaatctaa 24194932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 65
Target Start/End: Original strand, 24195059 - 24195105
Alignment:
Q  19 gagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||||||||||||| |||||| ||||||||||  ||||||||||||    
T  24195059 gagggaccaaaagtggaagaatatgaaattacaaggacaaaatctaa 24195105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 65
Target Start/End: Complemental strand, 41600073 - 41600027
Alignment:
Q  19 gagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    |||||| |||| ||| |||||||||||||||||| ||||||||||||    
T  41600073 gagggatcaaatgtggaagaatctgaaattacagggacaaaatctaa 41600027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 65
Target Start/End: Complemental strand, 48672394 - 48672348
Alignment:
Q  19 gagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    |||||| |||||||| |||||||||||||||||| ||| ||||||||    
T  48672394 gagggatcaaaagtggaagaatctgaaattacagagacgaaatctaa 48672348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 47; Significance: 7e-18; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 11 - 65
Target Start/End: Complemental strand, 19284252 - 19284198
Alignment:
Q  11 gatgaaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||||||||||||||||||||| |||||||||||||||||| ||||||||||||    
T  19284252 gatgaaaggagggaccaaaagtggaagaatctgaaattacagggacaaaatctaa 19284198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 65
Target Start/End: Complemental strand, 24732061 - 24732007
Alignment:
Q  11 gatgaaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||||||||||||||||||||  |||||||||||||||||| ||||||||||||    
T  24732061 gatgaaaggagggaccaaaagtagaagaatctgaaattacagggacaaaatctaa 24732007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 65
Target Start/End: Original strand, 32017759 - 32017813
Alignment:
Q  11 gatgaaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||||||||||||||||||||| |||||| ||||||||||| ||||||||||||    
T  32017759 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatctaa 32017813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 11 - 62
Target Start/End: Original strand, 30459156 - 30459207
Alignment:
Q  11 gatgaaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaatc 62  Q
    ||||||||||| ||||||||||||||||||||||||||||| ||||| ||||    
T  30459156 gatgaaaggagagaccaaaagtgaaagaatctgaaattacaatgacataatc 30459207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 57
Target Start/End: Original strand, 10321986 - 10322032
Alignment:
Q  11 gatgaaaggagggaccaaaagtgaaagaatctgaaattacagtgaca 57  Q
    |||||||||| ||||||||||||||||||||||||||||||| ||||    
T  10321986 gatgaaaggaaggaccaaaagtgaaagaatctgaaattacagggaca 10322032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 64
Target Start/End: Original strand, 2299564 - 2299617
Alignment:
Q  11 gatgaaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaatcta 64  Q
    ||||||||||||||  ||||||| |||||||||||||||||| |||||||||||    
T  2299564 gatgaaaggagggataaaaagtggaagaatctgaaattacagggacaaaatcta 2299617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 65
Target Start/End: Complemental strand, 9481305 - 9481251
Alignment:
Q  11 gatgaaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    |||||||||||||||||||| || |||||| ||||||||||| |||| |||||||    
T  9481305 gatgaaaggagggaccaaaattggaagaatatgaaattacagggacataatctaa 9481251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 65
Target Start/End: Complemental strand, 18500429 - 18500383
Alignment:
Q  19 gagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||||||||||||| |||||| ||||||||||| ||||||||||||    
T  18500429 gagggaccaaaagtggaagaatatgaaattacagggacaaaatctaa 18500383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 65
Target Start/End: Complemental strand, 30618081 - 30618031
Alignment:
Q  15 aaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||||||||||||||||| || ||| ||||||||||| ||||||||||||    
T  30618081 aaaggagggaccaaaagtggaacaatatgaaattacagggacaaaatctaa 30618031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 65
Target Start/End: Original strand, 9481446 - 9481491
Alignment:
Q  20 agggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    |||||||||||||| |||||||||||||||||  ||||||||||||    
T  9481446 agggaccaaaagtggaagaatctgaaattacaaggacaaaatctaa 9481491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 82 - 135
Target Start/End: Complemental strand, 30618017 - 30617964
Alignment:
Q  82 actaaaatcaaaattcactaatattacggggacgaaaatagatatttatccttt 135  Q
    |||||||||| |||||||||||||||| |||||||||| || |||||| |||||    
T  30618017 actaaaatcagaattcactaatattacagggacgaaaagaggtatttacccttt 30617964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 12 - 65
Target Start/End: Complemental strand, 33637681 - 33637628
Alignment:
Q  12 atgaaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    |||||||||||||||||||||| |||||||| ||||||||   |||||||||||    
T  33637681 atgaaaggagggaccaaaagtggaagaatctaaaattacaagaacaaaatctaa 33637628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 65
Target Start/End: Original strand, 9854144 - 9854196
Alignment:
Q  13 tgaaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||| ||||||||||||||| |||||| ||||||||||  ||||||||||||    
T  9854144 tgaaatgagggaccaaaagtggaagaatatgaaattacaaggacaaaatctaa 9854196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 11 - 50
Target Start/End: Original strand, 18500602 - 18500641
Alignment:
Q  11 gatgaaaggagggaccaaaagtgaaagaatctgaaattac 50  Q
    ||||||||||||||||||||||| |||||||| |||||||    
T  18500602 gatgaaaggagggaccaaaagtggaagaatctaaaattac 18500641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 65
Target Start/End: Original strand, 24732201 - 24732247
Alignment:
Q  19 gagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||||||||||||| |||||| ||||||||||  ||||||||||||    
T  24732201 gagggaccaaaagtggaagaatatgaaattacatggacaaaatctaa 24732247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 65
Target Start/End: Complemental strand, 26385393 - 26385347
Alignment:
Q  19 gagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||||||||||||| |||||| | ||||||||| ||||||||||||    
T  26385393 gagggaccaaaagtggaagaatataaaattacagggacaaaatctaa 26385347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 65
Target Start/End: Complemental strand, 33714602 - 33714556
Alignment:
Q  19 gagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||||||||||||| |||||| ||||||||||  ||||||||||||    
T  33714602 gagggaccaaaagtggaagaatatgaaattacaaggacaaaatctaa 33714556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 65
Target Start/End: Complemental strand, 9154990 - 9154949
Alignment:
Q  24 accaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||||| || |||||||||||||||||| ||||||||||||    
T  9154990 accaaaactggaagaatctgaaattacagggacaaaatctaa 9154949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 81 - 134
Target Start/End: Complemental strand, 30458951 - 30458898
Alignment:
Q  81 aactaaaatcaaaattcactaatattacggggacgaaaatagatatttatcctt 134  Q
    |||||||| | ||||||||||||||||| |||||||||| |  |||||||||||    
T  30458951 aactaaaaccgaaattcactaatattacagggacgaaaagatgtatttatcctt 30458898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 65
Target Start/End: Complemental strand, 14681003 - 14680951
Alignment:
Q  13 tgaaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||| || |||||||||||| |||||| ||||||||||  ||||||||||||    
T  14681003 tgaaatgaaggaccaaaagtggaagaatatgaaattacaaagacaaaatctaa 14680951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 65
Target Start/End: Complemental strand, 17142798 - 17142746
Alignment:
Q  13 tgaaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||| ||| ||||||||||| |||||| ||||||||||| |||| |||||||    
T  17142798 tgaaacgagagaccaaaagtggaagaatttgaaattacagggacataatctaa 17142746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 65
Target Start/End: Complemental strand, 30459022 - 30458970
Alignment:
Q  13 tgaaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||| ||| ||| ||||||  ||||||||||||||||||||||| |||||||    
T  30459022 tgaaatgagagactaaaagttgaagaatctgaaattacagtgacataatctaa 30458970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 59
Target Start/End: Original strand, 33637791 - 33637831
Alignment:
Q  19 gagggaccaaaagtgaaagaatctgaaattacagtgacaaa 59  Q
    |||||| ||||||||||||||| ||||||||||| ||||||    
T  33637791 gagggatcaaaagtgaaagaatatgaaattacagggacaaa 33637831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 47; Significance: 7e-18; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 11 - 65
Target Start/End: Complemental strand, 9619103 - 9619049
Alignment:
Q  11 gatgaaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||||||||||||||||||||| |||||||||||||||||| ||||||||||||    
T  9619103 gatgaaaggagggaccaaaagtggaagaatctgaaattacagggacaaaatctaa 9619049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 11 - 65
Target Start/End: Complemental strand, 15640838 - 15640784
Alignment:
Q  11 gatgaaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    |||||||||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  15640838 gatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacaaaatctaa 15640784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 11 - 65
Target Start/End: Complemental strand, 26252391 - 26252337
Alignment:
Q  11 gatgaaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||||||||||||||||||||| |||||||||||||||||| ||||||||||||    
T  26252391 gatgaaaggagggaccaaaagtggaagaatctgaaattacagggacaaaatctaa 26252337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 65
Target Start/End: Complemental strand, 3018135 - 3018081
Alignment:
Q  11 gatgaaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||||||||||||||||||||| |||||| ||||||||||| ||||||||||||    
T  3018135 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatctaa 3018081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 65
Target Start/End: Complemental strand, 7819137 - 7819083
Alignment:
Q  11 gatgaaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    |||||||||||| |||||||||| |||||||||||||||||| ||||||||||||    
T  7819137 gatgaaaggaggaaccaaaagtggaagaatctgaaattacagggacaaaatctaa 7819083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 65
Target Start/End: Original strand, 9516865 - 9516919
Alignment:
Q  11 gatgaaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||||||||||||||||||||  |||||||||||||||||| ||||||||||||    
T  9516865 gatgaaaggagggaccaaaagtagaagaatctgaaattacagggacaaaatctaa 9516919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 65
Target Start/End: Original strand, 31090316 - 31090370
Alignment:
Q  11 gatgaaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||||||||||||||||||||  |||||||||||||||||| ||||||||||||    
T  31090316 gatgaaaggagggaccaaaagtagaagaatctgaaattacagggacaaaatctaa 31090370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 65
Target Start/End: Original strand, 34064237 - 34064291
Alignment:
Q  11 gatgaaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    |||||||| |||||||||||||| |||||||||||||||||| ||||||||||||    
T  34064237 gatgaaagaagggaccaaaagtggaagaatctgaaattacagagacaaaatctaa 34064291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 65
Target Start/End: Original strand, 38574223 - 38574277
Alignment:
Q  11 gatgaaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||||||||||||||||||||| |||||| ||||||||||| ||||||||||||    
T  38574223 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatctaa 38574277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 65
Target Start/End: Original strand, 46046679 - 46046733
Alignment:
Q  11 gatgaaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    |||||||||||||| |||||||| |||||||||||||||||| ||||||||||||    
T  46046679 gatgaaaggagggatcaaaagtggaagaatctgaaattacagggacaaaatctaa 46046733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 11 - 64
Target Start/End: Complemental strand, 3273745 - 3273692
Alignment:
Q  11 gatgaaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaatcta 64  Q
    ||||||||||||||||||||||| |||||| ||||||||||| |||||||||||    
T  3273745 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatcta 3273692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 65
Target Start/End: Complemental strand, 4356004 - 4355950
Alignment:
Q  11 gatgaaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||||| |||||||||||||||||||||| ||||||||||  ||||||||||||    
T  4356004 gatgaaatgagggaccaaaagtgaaagaatatgaaattacatagacaaaatctaa 4355950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 65
Target Start/End: Complemental strand, 31944073 - 31944019
Alignment:
Q  11 gatgaaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||||||||| ||||||||||| |||||| ||||||||||| ||||||||||||    
T  31944073 gatgaaaggagagaccaaaagtggaagaatatgaaattacagggacaaaatctaa 31944019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 65
Target Start/End: Complemental strand, 34064097 - 34064051
Alignment:
Q  19 gagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||||||||||||| |||||||||||||||||| ||||||||||||    
T  34064097 gagggaccaaaagtggaagaatctgaaattacagagacaaaatctaa 34064051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 65
Target Start/End: Complemental strand, 35376285 - 35376231
Alignment:
Q  11 gatgaaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||||||||| ||||||||||| |||||||| ||||||||| ||||||||||||    
T  35376285 gatgaaaggagagaccaaaagtggaagaatctaaaattacagagacaaaatctaa 35376231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 65
Target Start/End: Original strand, 37012962 - 37013016
Alignment:
Q  11 gatgaaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||||||||| ||||||||||| |||||| ||||||||||| ||||||||||||    
T  37012962 gatgaaaggagtgaccaaaagtggaagaatatgaaattacagggacaaaatctaa 37013016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 65
Target Start/End: Original strand, 48580121 - 48580175
Alignment:
Q  11 gatgaaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||||||||||||||||||||| || ||| ||||||||||| ||||||||||||    
T  48580121 gatgaaaggagggaccaaaagtggaacaatatgaaattacagggacaaaatctaa 48580175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 65
Target Start/End: Complemental strand, 37012821 - 37012776
Alignment:
Q  20 agggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    |||||||||||||| |||||||||||||||||| ||||||||||||    
T  37012821 agggaccaaaagtggaagaatctgaaattacagggacaaaatctaa 37012776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 65
Target Start/End: Complemental strand, 48579980 - 48579935
Alignment:
Q  20 agggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||||||||| ||||||||||||||||||||| ||||||||||||    
T  48579980 agggaccaaaattgaaagaatctgaaattacagagacaaaatctaa 48579935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 65
Target Start/End: Complemental strand, 9396822 - 9396768
Alignment:
Q  11 gatgaaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||||||||||||||||||||| || ||| |||||||| || ||||||||||||    
T  9396822 gatgaaaggagggaccaaaagtggaaaaatttgaaattatagggacaaaatctaa 9396768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 65
Target Start/End: Original strand, 13132196 - 13132250
Alignment:
Q  11 gatgaaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    |||||||| |||||||||||||| |||||| ||||||||||| |||| |||||||    
T  13132196 gatgaaagaagggaccaaaagtggaagaatatgaaattacagggacagaatctaa 13132250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 65
Target Start/End: Complemental strand, 18713083 - 18713029
Alignment:
Q  11 gatgaaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    |||||||||||||||||||| || || ||| ||||||||||| ||||||||||||    
T  18713083 gatgaaaggagggaccaaaattggaacaatatgaaattacagggacaaaatctaa 18713029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 65
Target Start/End: Complemental strand, 31090176 - 31090130
Alignment:
Q  19 gagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||||||||||||| |||||| ||||||||||| ||||||||||||    
T  31090176 gagggaccaaaagtggaagaatatgaaattacagggacaaaatctaa 31090130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 65
Target Start/End: Complemental strand, 38574083 - 38574037
Alignment:
Q  19 gagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||||||||||||| |||||| ||||||||||| ||||||||||||    
T  38574083 gagggaccaaaagtggaagaatatgaaattacagggacaaaatctaa 38574037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 7819277 - 7819322
Alignment:
Q  19 gagggaccaaaagtgaaagaatctgaaattacagtgacaaaatcta 64  Q
    ||||||||||||||| |||||||||| ||||||| |||||||||||    
T  7819277 gagggaccaaaagtggaagaatctgacattacagggacaaaatcta 7819322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 65
Target Start/End: Original strand, 18713224 - 18713269
Alignment:
Q  20 agggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||||||||| || |||||||||||||||||| ||||||||||||    
T  18713224 agggaccaaaactggaagaatctgaaattacagagacaaaatctaa 18713269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 84 - 129
Target Start/End: Original strand, 48260080 - 48260125
Alignment:
Q  84 taaaatcaaaattcactaatattacggggacgaaaatagatattta 129  Q
    |||||||||||||| |||||||||| |||||||||| |||||||||    
T  48260080 taaaatcaaaattcgctaatattacagggacgaaaagagatattta 48260125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 65
Target Start/End: Original strand, 3273877 - 3273929
Alignment:
Q  13 tgaaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||| |||||| |||||||| |||||||||||||||||| || |||||||||    
T  3273877 tgaaatgagggatcaaaagtggaagaatctgaaattacagggataaaatctaa 3273929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 65
Target Start/End: Original strand, 9396968 - 9397008
Alignment:
Q  25 ccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||||||| |||||||||||||||||| ||||||||||||    
T  9396968 ccaaaagtggaagaatctgaaattacagggacaaaatctaa 9397008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 65
Target Start/End: Original strand, 15640972 - 15641024
Alignment:
Q  13 tgaaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||| |||| |||||||||| |||||||||||||||||| |||| |||||||    
T  15640972 tgaaatgaggaaccaaaagtggaagaatctgaaattacagggacataatctaa 15641024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 65
Target Start/End: Original strand, 26252502 - 26252546
Alignment:
Q  21 gggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||||||||||| |||||| ||||||||||| ||||||||||||    
T  26252502 gggaccaaaagtggaagaatatgaaattacagggacaaaatctaa 26252546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 82 - 129
Target Start/End: Original strand, 13132267 - 13132314
Alignment:
Q  82 actaaaatcaaaattcactaatattacggggacgaaaatagatattta 129  Q
    ||||||||| |||||| |||||||||| ||||||||||||| ||||||    
T  13132267 actaaaatcgaaattcgctaatattacagggacgaaaataggtattta 13132314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 62
Target Start/End: Original strand, 4356145 - 4356187
Alignment:
Q  20 agggaccaaaagtgaaagaatctgaaattacagtgacaaaatc 62  Q
    |||||||||||||| |||||| ||||||||||| |||||||||    
T  4356145 agggaccaaaagtggaagaatttgaaattacagagacaaaatc 4356187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 65
Target Start/End: Complemental strand, 9516725 - 9516679
Alignment:
Q  19 gagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||||||||||||| |||||| ||||||||||  ||||||||||||    
T  9516725 gagggaccaaaagtggaagaatatgaaattacaaggacaaaatctaa 9516679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 61
Target Start/End: Original strand, 35376391 - 35376433
Alignment:
Q  19 gagggaccaaaagtgaaagaatctgaaattacagtgacaaaat 61  Q
    ||||||||||||||| |||| ||||||||||||| ||||||||    
T  35376391 gagggaccaaaagtggaagattctgaaattacagggacaaaat 35376433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 65
Target Start/End: Original strand, 41947112 - 41947165
Alignment:
Q  12 atgaaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||||| |||||||||||||| || ||| ||||||||||  ||||||||||||    
T  41947112 atgaaagcagggaccaaaagtggaaaaatatgaaattacaaggacaaaatctaa 41947165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 46046539 - 46046494
Alignment:
Q  19 gagggaccaaaagtgaaagaatctgaaattacagtgacaaaatcta 64  Q
    |||||| |||||||| |||||| ||||||||||| |||||||||||    
T  46046539 gagggatcaaaagtggaagaatatgaaattacagggacaaaatcta 46046494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 99 - 135
Target Start/End: Original strand, 35376472 - 35376508
Alignment:
Q  99 ctaatattacggggacgaaaatagatatttatccttt 135  Q
    |||||||||| |||||||||| |||||||||||||||    
T  35376472 ctaatattacagggacgaaaagagatatttatccttt 35376508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 47; Significance: 7e-18; HSPs: 42)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 11 - 65
Target Start/End: Original strand, 20853951 - 20854005
Alignment:
Q  11 gatgaaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||||||||||||||||||||| |||||||||||||||||| ||||||||||||    
T  20853951 gatgaaaggagggaccaaaagtggaagaatctgaaattacagggacaaaatctaa 20854005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 11 - 65
Target Start/End: Complemental strand, 43572512 - 43572458
Alignment:
Q  11 gatgaaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||||||||||||||||||||| |||||||||||||||||| ||||||||||||    
T  43572512 gatgaaaggagggaccaaaagtggaagaatctgaaattacagggacaaaatctaa 43572458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 11 - 65
Target Start/End: Complemental strand, 45970038 - 45969984
Alignment:
Q  11 gatgaaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||||||||| |||||||||||||||||||||||||||||| ||||||||||||    
T  45970038 gatgaaaggagagaccaaaagtgaaagaatctgaaattacagggacaaaatctaa 45969984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 11 - 64
Target Start/End: Complemental strand, 21633019 - 21632966
Alignment:
Q  11 gatgaaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaatcta 64  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  21633019 gatgaaaggagggaccaaaagtgaaagaatctgaaattacagggacaacatcta 21632966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 65
Target Start/End: Complemental strand, 33372529 - 33372475
Alignment:
Q  11 gatgaaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||||||||||||||||||||| || ||||||||||||||| ||||||||||||    
T  33372529 gatgaaaggagggaccaaaagtggaataatctgaaattacagggacaaaatctaa 33372475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 65
Target Start/End: Complemental strand, 45003619 - 45003565
Alignment:
Q  11 gatgaaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||||||||||||| ||||||| |||||||||||||||||| ||||||||||||    
T  45003619 gatgaaaggagggacaaaaagtggaagaatctgaaattacagggacaaaatctaa 45003565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 65
Target Start/End: Original strand, 52552943 - 52552997
Alignment:
Q  11 gatgaaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||||||||||||||||||||| |||||| ||||||||||| ||||||||||||    
T  52552943 gatgaaaggagggaccaaaagtggaagaatatgaaattacagagacaaaatctaa 52552997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 65
Target Start/End: Original strand, 9267230 - 9267284
Alignment:
Q  11 gatgaaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||||||||||||||||||||  |||||||||| ||||||| ||||||||||||    
T  9267230 gatgaaaggagggaccaaaagtagaagaatctgatattacagggacaaaatctaa 9267284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 65
Target Start/End: Complemental strand, 11003855 - 11003801
Alignment:
Q  11 gatgaaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    |||||||||| |||||||||||| |||||||||||||||||  ||||||||||||    
T  11003855 gatgaaaggatggaccaaaagtggaagaatctgaaattacaaggacaaaatctaa 11003801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 65
Target Start/End: Complemental strand, 14161994 - 14161940
Alignment:
Q  11 gatgaaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||||||||||||||||||||| |||||| ||||||||||| |||| |||||||    
T  14161994 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacataatctaa 14161940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 65
Target Start/End: Original strand, 14171841 - 14171895
Alignment:
Q  11 gatgaaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    |||||||||| |||||||||||| ||||||| |||||||||| ||||||||||||    
T  14171841 gatgaaaggaaggaccaaaagtggaagaatcagaaattacagggacaaaatctaa 14171895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 65
Target Start/End: Complemental strand, 16722114 - 16722060
Alignment:
Q  11 gatgaaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    |||||||| |||||||||||||| |||||||||||||||||  ||||||||||||    
T  16722114 gatgaaagaagggaccaaaagtggaagaatctgaaattacatggacaaaatctaa 16722060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 61
Target Start/End: Original strand, 17465622 - 17465672
Alignment:
Q  11 gatgaaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaat 61  Q
    |||||||||||||||||||||||||||||||| || |||||| ||||||||    
T  17465622 gatgaaaggagggaccaaaagtgaaagaatctaaagttacagggacaaaat 17465672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 65
Target Start/End: Original strand, 19113020 - 19113074
Alignment:
Q  11 gatgaaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||||||||||||||||||||  |||||||||||||||||| || |||||||||    
T  19113020 gatgaaaggagggaccaaaagtagaagaatctgaaattacagggataaaatctaa 19113074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 65
Target Start/End: Original strand, 21633159 - 21633205
Alignment:
Q  19 gagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||||||||||||| |||||||||||||||||| ||||||||||||    
T  21633159 gagggaccaaaagtggaagaatctgaaattacagggacaaaatctaa 21633205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 65
Target Start/End: Original strand, 30500296 - 30500350
Alignment:
Q  11 gatgaaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||||||||||||||||||||| || ||| ||||||||||| ||||||||||||    
T  30500296 gatgaaaggagggaccaaaagtggaacaatatgaaattacagggacaaaatctaa 30500350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 65
Target Start/End: Complemental strand, 35995793 - 35995747
Alignment:
Q  19 gagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||||||||||||| |||||||||||||||||| ||||||||||||    
T  35995793 gagggaccaaaagtggaagaatctgaaattacagggacaaaatctaa 35995747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 65
Target Start/End: Complemental strand, 49986651 - 49986597
Alignment:
Q  11 gatgaaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||||||||| ||||||||||  |||||||||||||||||| ||||||||||||    
T  49986651 gatgaaaggagagaccaaaagtagaagaatctgaaattacagggacaaaatctaa 49986597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 65
Target Start/End: Complemental strand, 14262150 - 14262105
Alignment:
Q  20 agggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    |||||||||||||| |||||||||||||||||| ||||||||||||    
T  14262150 agggaccaaaagtggaagaatctgaaattacagggacaaaatctaa 14262105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 165 - 283
Target Start/End: Original strand, 47575650 - 47575759
Alignment:
Q  165 ttgttagaaaaggggaatatttgatctcagtcacattaatcacattaatcgtgttgccattaagnnnnnnnncacattaatcgtgattgagnnnnnnngg 264  Q
    ||||||||||||||||||||||||||||||         || ||||||||||||||||||||||        |||||||||||||||||||       ||    
T  47575650 ttgttagaaaaggggaatatttgatctcag---------tcgcattaatcgtgttgccattaagaaaaaaaacacattaatcgtgattgagaaaaaaagg 47575740  T
Q  265 gcacgaattgtagtagtat 283  Q
    |||||||||||||||||||    
T  47575741 gcacgaattgtagtagtat 47575759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 65
Target Start/End: Complemental strand, 4204829 - 4204777
Alignment:
Q  13 tgaaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||| ||||||||||||||| |||||||||||||||||| |||| |||||||    
T  4204829 tgaaatgagggaccaaaagtggaagaatctgaaattacagggacataatctaa 4204777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 65
Target Start/End: Original strand, 43572648 - 43572700
Alignment:
Q  13 tgaaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||| ||||||||||||||| |||||||||||||||||| |||| |||||||    
T  43572648 tgaaatgagggaccaaaagtggaagaatctgaaattacagggacagaatctaa 43572700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 65
Target Start/End: Complemental strand, 5800728 - 5800674
Alignment:
Q  11 gatgaaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    |||||||||||||||||||| || |||||| ||||||||||| |||| |||||||    
T  5800728 gatgaaaggagggaccaaaaatggaagaatatgaaattacagggacataatctaa 5800674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 65
Target Start/End: Complemental strand, 9267090 - 9267044
Alignment:
Q  19 gagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||||||||||||| |||||| ||||||||||| ||||||||||||    
T  9267090 gagggaccaaaagtggaagaatatgaaattacagggacaaaatctaa 9267044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 65
Target Start/End: Original strand, 14262291 - 14262345
Alignment:
Q  11 gatgaaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||||||||||||| ||||||| || ||| ||||||||||| ||||||||||||    
T  14262291 gatgaaaggagggactaaaagtggaacaatatgaaattacagggacaaaatctaa 14262345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 65
Target Start/End: Original strand, 35995933 - 35995987
Alignment:
Q  11 gatgaaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    |||||||| |||||||||||||| |||||||||||||||| | |||||| |||||    
T  35995933 gatgaaagaagggaccaaaagtggaagaatctgaaattactgagacaaattctaa 35995987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 65
Target Start/End: Original strand, 47575527 - 47575581
Alignment:
Q  11 gatgaaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||||||||| ||||||||||  || ||||||||||||||| ||||||||||||    
T  47575527 gatgaaaggagagaccaaaagttgaaaaatctgaaattacagagacaaaatctaa 47575581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 65
Target Start/End: Original strand, 14162135 - 14162180
Alignment:
Q  20 agggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    |||||||||||||| |||||||||||||||||  ||||||||||||    
T  14162135 agggaccaaaagtggaagaatctgaaattacaaggacaaaatctaa 14162180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 65
Target Start/End: Original strand, 15328724 - 15328769
Alignment:
Q  20 agggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    |||||||||||||| || ||||||||||||||| ||||||||||||    
T  15328724 agggaccaaaagtggaaaaatctgaaattacagggacaaaatctaa 15328769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 65
Target Start/End: Original strand, 16722255 - 16722300
Alignment:
Q  20 agggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    |||||||||||||| |||||| ||||||||||| ||||||||||||    
T  16722255 agggaccaaaagtggaagaatatgaaattacagggacaaaatctaa 16722300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 65
Target Start/End: Complemental strand, 30500155 - 30500110
Alignment:
Q  20 agggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    |||||||||||||| |||||| ||||||||||| ||||||||||||    
T  30500155 agggaccaaaagtggaagaatatgaaattacagggacaaaatctaa 30500110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 21 - 129
Target Start/End: Original strand, 33372669 - 33372779
Alignment:
Q  21 gggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa--nnnnnnnnnnactgaaactaaaatcaaaattcactaatattacggggacgaaa 118  Q
    |||| |||||||| |||||||||||||||||| ||||||||||||            || | |||||||||| |||||| ||||||||||||||||||||    
T  33372669 gggatcaaaagtggaagaatctgaaattacagggacaaaatctaaatcttttttttaacaggaactaaaatcgaaattcgctaatattacggggacgaaa 33372768  T
Q  119 atagatattta 129  Q
    | || ||||||    
T  33372769 agaggtattta 33372779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 65
Target Start/End: Complemental strand, 52552806 - 52552761
Alignment:
Q  20 agggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||| |||||||| |||||||||||||||||| ||||||||||||    
T  52552806 agggatcaaaagtggaagaatctgaaattacagggacaaaatctaa 52552761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 65
Target Start/End: Complemental strand, 14171701 - 14171655
Alignment:
Q  19 gagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    |||||| |||||||| |||||| ||||||||||| ||||||||||||    
T  14171701 gagggatcaaaagtggaagaatttgaaattacagggacaaaatctaa 14171655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 65
Target Start/End: Original strand, 17649269 - 17649319
Alignment:
Q  15 aaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||||| ||||||| ||| || ||||||||||||||| ||||||||||||    
T  17649269 aaaggagagaccaaatgtggaataatctgaaattacagggacaaaatctaa 17649319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 65
Target Start/End: Complemental strand, 20853811 - 20853765
Alignment:
Q  19 gagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||||||||||||| |||||| |||||||| || ||||||||||||    
T  20853811 gagggaccaaaagtggaagaatatgaaattatagggacaaaatctaa 20853765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 65
Target Start/End: Original strand, 38283805 - 38283859
Alignment:
Q  11 gatgaaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    |||||||  ||||| |||||||| ||||||||||||||| || ||||||||||||    
T  38283805 gatgaaataagggatcaaaagtggaagaatctgaaattatagggacaaaatctaa 38283859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 65
Target Start/End: Original strand, 5800869 - 5800914
Alignment:
Q  20 agggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    |||||||||||||| |||||| ||||||||||  ||||||||||||    
T  5800869 agggaccaaaagtggaagaatatgaaattacaaggacaaaatctaa 5800914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 65
Target Start/End: Complemental strand, 19112879 - 19112834
Alignment:
Q  20 agggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    |||||||||||||| |||||| ||||||| ||| ||||||||||||    
T  19112879 agggaccaaaagtggaagaatatgaaattccagggacaaaatctaa 19112834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 65
Target Start/End: Original strand, 45058755 - 45058800
Alignment:
Q  20 agggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||| ||||| || |||||||||||||||||| ||||||||||||    
T  45058755 agggatcaaaaatggaagaatctgaaattacagagacaaaatctaa 45058800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 61
Target Start/End: Original strand, 45970183 - 45970220
Alignment:
Q  24 accaaaagtgaaagaatctgaaattacagtgacaaaat 61  Q
    |||||||||| |||||||||||||||||| ||||||||    
T  45970183 accaaaagtggaagaatctgaaattacagggacaaaat 45970220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 82 - 134
Target Start/End: Original strand, 45970244 - 45970296
Alignment:
Q  82 actaaaatcaaaattcactaatattacggggacgaaaatagatatttatcctt 134  Q
    ||||||| | ||||||||||||||||| |||||||||| || |||||| ||||    
T  45970244 actaaaaccgaaattcactaatattacagggacgaaaagaggtatttaccctt 45970296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 47; Significance: 7e-18; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 11 - 61
Target Start/End: Complemental strand, 26236250 - 26236200
Alignment:
Q  11 gatgaaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaat 61  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  26236250 gatgaaaggagggaccaaaagtgaaagaatctgaaattacagggacaaaat 26236200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 65
Target Start/End: Complemental strand, 13254620 - 13254566
Alignment:
Q  11 gatgaaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    |||||||||||| ||||||||||||||||||||||||||||  ||||||||||||    
T  13254620 gatgaaaggaggaaccaaaagtgaaagaatctgaaattacaaggacaaaatctaa 13254566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 65
Target Start/End: Original strand, 17850841 - 17850895
Alignment:
Q  11 gatgaaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||||| ||||||||||||||| |||||||||||||||||| ||||||||||||    
T  17850841 gatgaaaagagggaccaaaagtggaagaatctgaaattacagggacaaaatctaa 17850895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 65
Target Start/End: Complemental strand, 19251593 - 19251539
Alignment:
Q  11 gatgaaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||||||||||||||||||||| |||||| ||||||||||| ||||||||||||    
T  19251593 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatctaa 19251539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 65
Target Start/End: Complemental strand, 26135940 - 26135886
Alignment:
Q  11 gatgaaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||||||||||||||||||||  |||||||||||||||||| ||||||||||||    
T  26135940 gatgaaaggagggaccaaaagtagaagaatctgaaattacagggacaaaatctaa 26135886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 19 - 129
Target Start/End: Original strand, 15106330 - 15106440
Alignment:
Q  19 gagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaannnnnnnnnnactgaaactaaaatcaaaattcactaatattacggggacgaaa 118  Q
    |||||| |||||||| |||||||||||||||||| ||||||||||||          || |  ||||||||| |||||| ||||||||||||||||||||    
T  15106330 gagggatcaaaagtggaagaatctgaaattacagggacaaaatctaaatttttttttacagggactaaaatcgaaattcgctaatattacggggacgaaa 15106429  T
Q  119 atagatattta 129  Q
    | || ||||||    
T  15106430 agaggtattta 15106440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 13 - 65
Target Start/End: Original strand, 20499002 - 20499054
Alignment:
Q  13 tgaaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||| || ||||||||||||||||||||||||||||||| ||||||||||||    
T  20499002 tgaaatgaaggaccaaaagtgaaagaatctgaaattacagggacaaaatctaa 20499054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 63
Target Start/End: Original strand, 22263446 - 22263498
Alignment:
Q  11 gatgaaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaatct 63  Q
    ||||||||||||||||||||||| |||||| ||||||||||| ||||||||||    
T  22263446 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatct 22263498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 65
Target Start/End: Complemental strand, 15106190 - 15106136
Alignment:
Q  11 gatgaaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||||||||||||||||||||| || ||||| ||||||||| ||||||||||||    
T  15106190 gatgaaaggagggaccaaaagtggaataatctaaaattacagggacaaaatctaa 15106136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 65
Target Start/End: Original strand, 23854921 - 23854975
Alignment:
Q  11 gatgaaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||||||||||||||||||||| |||||| | ||||||||| ||||||||||||    
T  23854921 gatgaaaggagggaccaaaagtggaagaatataaaattacagagacaaaatctaa 23854975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 64
Target Start/End: Complemental strand, 23806075 - 23806022
Alignment:
Q  11 gatgaaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaatcta 64  Q
    ||||||||||||||||||||||| |||||||| ||||||||| | |||||||||    
T  23806075 gatgaaaggagggaccaaaagtggaagaatctaaaattacaggggcaaaatcta 23806022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 65
Target Start/End: Complemental strand, 17463214 - 17463160
Alignment:
Q  11 gatgaaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||||| |||||||||||||||  |||| |||||||||||| ||||||||||||    
T  17463214 gatgaaatgagggaccaaaagtgggagaacctgaaattacagggacaaaatctaa 17463160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 65
Target Start/End: Original strand, 23806215 - 23806261
Alignment:
Q  19 gagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||||||||||||| |||||| ||||||||||| ||||||||||||    
T  23806215 gagggaccaaaagtggaagaatatgaaattacagggacaaaatctaa 23806261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 65
Target Start/End: Original strand, 26236358 - 26236404
Alignment:
Q  19 gagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    |||||||||||| || |||||||||||||||||| ||||||||||||    
T  26236358 gagggaccaaaaatggaagaatctgaaattacagggacaaaatctaa 26236404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 65
Target Start/End: Complemental strand, 30390574 - 30390528
Alignment:
Q  19 gagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||||||||||||| |||||| ||||||||||| ||||||||||||    
T  30390574 gagggaccaaaagtggaagaatatgaaattacagggacaaaatctaa 30390528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 65
Target Start/End: Complemental strand, 39878225 - 39878171
Alignment:
Q  11 gatgaaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||||||||| ||||||||||| ||||||||||||||||||  ||| |||||||    
T  39878225 gatgaaaggagtgaccaaaagtggaagaatctgaaattacagatacataatctaa 39878171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 65
Target Start/End: Original strand, 42670974 - 42671028
Alignment:
Q  11 gatgaaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||||||||||||||||||||| || ||| ||||||||||| |||| |||||||    
T  42670974 gatgaaaggagggaccaaaagtggaaaaatatgaaattacagggacataatctaa 42671028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 65
Target Start/End: Complemental strand, 22263305 - 22263260
Alignment:
Q  20 agggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    |||||||||||||| |||||| ||||||||||| ||||||||||||    
T  22263305 agggaccaaaagtggaagaatatgaaattacagggacaaaatctaa 22263260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 65
Target Start/End: Complemental strand, 26560668 - 26560623
Alignment:
Q  20 agggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    |||||||||||||| |||||||||||||||||| ||| ||||||||    
T  26560668 agggaccaaaagtggaagaatctgaaattacagggactaaatctaa 26560623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 13 - 52
Target Start/End: Original strand, 13254693 - 13254732
Alignment:
Q  13 tgaaaggagggaccaaaagtgaaagaatctgaaattacag 52  Q
    ||||| ||||||||||||||| ||||||||||||||||||    
T  13254693 tgaaatgagggaccaaaagtggaagaatctgaaattacag 13254732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 13 - 52
Target Start/End: Original strand, 39878359 - 39878398
Alignment:
Q  13 tgaaaggagggaccaaaagtgaaagaatctgaaattacag 52  Q
    ||||| |||||||||||||||||| |||||||||||||||    
T  39878359 tgaaatgagggaccaaaagtgaaaaaatctgaaattacag 39878398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 65
Target Start/End: Complemental strand, 17850701 - 17850655
Alignment:
Q  19 gagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    |||||| |||||||| |||||||| ||||||||| ||||||||||||    
T  17850701 gagggatcaaaagtggaagaatcttaaattacagagacaaaatctaa 17850655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 65
Target Start/End: Complemental strand, 20498864 - 20498815
Alignment:
Q  15 aaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||||||||||||||||| |||||||||||| ||||| |||| |||||||    
T  20498864 aaaggagggaccaaaagtggaagaatctgaaa-tacagggacataatctaa 20498815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 65
Target Start/End: Original strand, 26560809 - 26560863
Alignment:
Q  11 gatgaaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||||||||| ||||||||||| |||||| |||||||| |  ||||||||||||    
T  26560809 gatgaaaggagagaccaaaagtggaagaatatgaaattatatggacaaaatctaa 26560863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 13284671 - 13284716
Alignment:
Q  19 gagggaccaaaagtgaaagaatctgaaattacagtgacaaaatcta 64  Q
    ||||||||||||||| | |||||||||||||||  |||||||||||    
T  13284671 gagggaccaaaagtggaggaatctgaaattacaaggacaaaatcta 13284716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 129
Target Start/End: Complemental strand, 15106107 - 15106070
Alignment:
Q  92 aaattcactaatattacggggacgaaaatagatattta 129  Q
    |||||| ||||||||||||||||||||| |||||||||    
T  15106107 aaattcgctaatattacggggacgaaaagagatattta 15106070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 82 - 119
Target Start/End: Complemental strand, 34548624 - 34548587
Alignment:
Q  82 actaaaatcaaaattcactaatattacggggacgaaaa 119  Q
    ||||||| ||||||||||||||||||| ||||||||||    
T  34548624 actaaaaccaaaattcactaatattacagggacgaaaa 34548587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 65
Target Start/End: Complemental strand, 42670833 - 42670788
Alignment:
Q  20 agggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    |||||||||||||| |||||| ||||||||||  ||||||||||||    
T  42670833 agggaccaaaagtggaagaatatgaaattacaaggacaaaatctaa 42670788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 25 - 65
Target Start/End: Complemental strand, 23854797 - 23854757
Alignment:
Q  25 ccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||||||| |||||| ||||||||||| ||||||||||||    
T  23854797 ccaaaagtggaagaatatgaaattacagggacaaaatctaa 23854757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 47; Significance: 7e-18; HSPs: 32)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 11 - 65
Target Start/End: Original strand, 4907217 - 4907271
Alignment:
Q  11 gatgaaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||||||||||||||||||||| |||||||||||||||||| ||||||||||||    
T  4907217 gatgaaaggagggaccaaaagtggaagaatctgaaattacagggacaaaatctaa 4907271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 11 - 65
Target Start/End: Complemental strand, 24467751 - 24467697
Alignment:
Q  11 gatgaaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||||||||||||||||||||| |||||||||||||||||| ||||||||||||    
T  24467751 gatgaaaggagggaccaaaagtggaagaatctgaaattacagggacaaaatctaa 24467697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 65
Target Start/End: Complemental strand, 18462408 - 18462354
Alignment:
Q  11 gatgaaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    |||||||||||||||||||| || |||||||||||||||||| ||||||||||||    
T  18462408 gatgaaaggagggaccaaaaatggaagaatctgaaattacagggacaaaatctaa 18462354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 65
Target Start/End: Original strand, 52058263 - 52058317
Alignment:
Q  11 gatgaaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||||||||||||||||||||| |||||||||||||||||| |||| |||||||    
T  52058263 gatgaaaggagggaccaaaagtggaagaatctgaaattacagggacataatctaa 52058317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 13 - 65
Target Start/End: Original strand, 24467884 - 24467936
Alignment:
Q  13 tgaaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||| ||||||||||||||| |||||||||||||||||| ||||||||||||    
T  24467884 tgaaatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaa 24467936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 62
Target Start/End: Original strand, 33628949 - 33628996
Alignment:
Q  15 aaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaatc 62  Q
    ||||||||||||||||||| |||||||||||||||||| |||||||||    
T  33628949 aaaggagggaccaaaagtggaagaatctgaaattacagggacaaaatc 33628996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 65
Target Start/End: Complemental strand, 30299354 - 30299300
Alignment:
Q  11 gatgaaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||||||||| ||||||||||| |||||| ||||||||||| ||||||||||||    
T  30299354 gatgaaaggagagaccaaaagtggaagaatatgaaattacagggacaaaatctaa 30299300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 65
Target Start/End: Complemental strand, 33628805 - 33628759
Alignment:
Q  19 gagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||    
T  33628805 gagggaccaaaagtgaaagaatctgaaattacggggacaaaatctaa 33628759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 65
Target Start/End: Original strand, 39826312 - 39826355
Alignment:
Q  22 ggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    |||||||||||| |||||||||||||||||| ||||||||||||    
T  39826312 ggaccaaaagtggaagaatctgaaattacagggacaaaatctaa 39826355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 65
Target Start/End: Complemental strand, 4907077 - 4907031
Alignment:
Q  19 gagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||||||||||||| |||||| ||||||||||| ||||||||||||    
T  4907077 gagggaccaaaagtggaagaatatgaaattacagggacaaaatctaa 4907031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 65
Target Start/End: Original strand, 8293070 - 8293116
Alignment:
Q  19 gagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||||||||||||| |||||| ||||||||||| ||||||||||||    
T  8293070 gagggaccaaaagtggaagaatatgaaattacagggacaaaatctaa 8293116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 65
Target Start/End: Complemental strand, 17606431 - 17606377
Alignment:
Q  11 gatgaaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||||| ||||||||||||||| |||||| |||||||||||  |||||||||||    
T  17606431 gatgaaatgagggaccaaaagtggaagaatatgaaattacaggaacaaaatctaa 17606377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 65
Target Start/End: Original strand, 29696821 - 29696867
Alignment:
Q  19 gagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||||||||||||| |||||||||||||||||  ||||||||||||    
T  29696821 gagggaccaaaagtggaagaatctgaaattacatggacaaaatctaa 29696867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 65
Target Start/End: Original strand, 30299494 - 30299540
Alignment:
Q  19 gagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||||||||||||| |||||||| ||||||||| ||||||||||||    
T  30299494 gagggaccaaaagtggaagaatctaaaattacagggacaaaatctaa 30299540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 65
Target Start/End: Original strand, 34749364 - 34749414
Alignment:
Q  15 aaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    |||||||| |||||||||| |||||||||||||||||| || |||||||||    
T  34749364 aaaggaggtaccaaaagtggaagaatctgaaattacagggataaaatctaa 34749414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 65
Target Start/End: Complemental strand, 39711191 - 39711141
Alignment:
Q  15 aaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||||||||||||||||| |||||| ||||||||||  ||||||||||||    
T  39711191 aaaggagggaccaaaagtggaagaatatgaaattacaaggacaaaatctaa 39711141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 65
Target Start/End: Complemental strand, 39826165 - 39826119
Alignment:
Q  19 gagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    |||||| |||||||| |||||||||||||||||| ||||||||||||    
T  39826165 gagggatcaaaagtggaagaatctgaaattacagggacaaaatctaa 39826119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 65
Target Start/End: Complemental strand, 39970761 - 39970715
Alignment:
Q  19 gagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||||||||||||| |||||||||||||||||  ||||||||||||    
T  39970761 gagggaccaaaagtggaagaatctgaaattacatagacaaaatctaa 39970715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 65
Target Start/End: Original strand, 39970900 - 39970954
Alignment:
Q  11 gatgaaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    |||||||| |||||||||||||| ||| |||| ||||||||| ||||||||||||    
T  39970900 gatgaaagaagggaccaaaagtggaaggatctaaaattacagggacaaaatctaa 39970954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 65
Target Start/End: Complemental strand, 43539470 - 43539416
Alignment:
Q  11 gatgaaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||||||||||||||||||||| || ||| | ||||||||| ||||||||||||    
T  43539470 gatgaaaggagggaccaaaagtggaacaatataaaattacagggacaaaatctaa 43539416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 65
Target Start/End: Complemental strand, 48072084 - 48072030
Alignment:
Q  11 gatgaaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    |||||||||||||| |||||||| || ||| ||||||||||| ||||||||||||    
T  48072084 gatgaaaggagggagcaaaagtggaataatatgaaattacagggacaaaatctaa 48072030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 65
Target Start/End: Original strand, 17606572 - 17606617
Alignment:
Q  20 agggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    |||||||||||||| |||||||||||||||||  ||||||||||||    
T  17606572 agggaccaaaagtggaagaatctgaaattacaaggacaaaatctaa 17606617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 65
Target Start/End: Original strand, 20995932 - 20995977
Alignment:
Q  20 agggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    |||||||||||||| |||||| ||||||||||| ||||||||||||    
T  20995932 agggaccaaaagtggaagaatatgaaattacagagacaaaatctaa 20995977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 65
Target Start/End: Original strand, 18462541 - 18462593
Alignment:
Q  13 tgaaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||| ||| ||||||||||| |||||||||||||||| | ||||||||||||    
T  18462541 tgaaatgagagaccaaaagtggaagaatctgaaattacggggacaaaatctaa 18462593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 65
Target Start/End: Complemental strand, 42510135 - 42510083
Alignment:
Q  13 tgaaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||| ||||||| ||||||| |||||| ||||||||||| ||||||||||||    
T  42510135 tgaaatgagggactaaaagtggaagaatatgaaattacagggacaaaatctaa 42510083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 52058132 - 52058088
Alignment:
Q  13 tgaaaggagggaccaaaagtgaaagaatctgaaattacagtgaca 57  Q
    ||||| ||||||||||||||| |||||||||||||||||| ||||    
T  52058132 tgaaatgagggaccaaaagtggaagaatctgaaattacagggaca 52058088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 13 - 64
Target Start/End: Complemental strand, 7473913 - 7473862
Alignment:
Q  13 tgaaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaatcta 64  Q
    ||||| ||||||||||||||| |||||| ||||||||||| |||| ||||||    
T  7473913 tgaaatgagggaccaaaagtggaagaatatgaaattacagagacataatcta 7473862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 65
Target Start/End: Complemental strand, 8292927 - 8292873
Alignment:
Q  11 gatgaaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||||| |||| |||||||||| |||||| ||||||| ||| ||||||||||||    
T  8292927 gatgaaaagaggaaccaaaagtggaagaatatgaaatttcagggacaaaatctaa 8292873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 65
Target Start/End: Complemental strand, 29696687 - 29696633
Alignment:
Q  11 gatgaaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||||||||| ||| ||||||| |||||| ||||||||| | ||||||||||||    
T  29696687 gatgaaaggagtgacaaaaagtggaagaatatgaaattacggggacaaaatctaa 29696633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 65
Target Start/End: Complemental strand, 34749252 - 34749206
Alignment:
Q  19 gagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||||||||||||| |||||| ||||||||| | ||||||||||||    
T  34749252 gagggaccaaaagtggaagaatatgaaattacggggacaaaatctaa 34749206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 65
Target Start/End: Original strand, 39711335 - 39711381
Alignment:
Q  19 gagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||||||||||||| |||||| ||||||||| | ||||||||||||    
T  39711335 gagggaccaaaagtggaagaatatgaaattacggggacaaaatctaa 39711381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 52
Target Start/End: Complemental strand, 20995792 - 20995751
Alignment:
Q  11 gatgaaaggagggaccaaaagtgaaagaatctgaaattacag 52  Q
    |||||||| ||||||||||||||||||||| | |||||||||    
T  20995792 gatgaaagaagggaccaaaagtgaaagaatataaaattacag 20995751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0809
Description:

Target: scaffold0809; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 65
Target Start/End: Complemental strand, 1533 - 1479
Alignment:
Q  11 gatgaaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||||||||||||||||||||| |||||||||||||||||| |||| |||||||    
T  1533 gatgaaaggagggaccaaaagtggaagaatctgaaattacagggacataatctaa 1479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 65
Target Start/End: Original strand, 1673 - 1719
Alignment:
Q  19 gagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||||||||||||| |||||||||||||||||  |||| |||||||    
T  1673 gagggaccaaaagtggaagaatctgaaattacaaggacataatctaa 1719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 65
Target Start/End: Original strand, 12237 - 12291
Alignment:
Q  11 gatgaaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    |||||||||| |||||||||||| |||||||||||||||||| ||||||||||||    
T  12237 gatgaaaggatggaccaaaagtggaagaatctgaaattacagggacaaaatctaa 12291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 65
Target Start/End: Complemental strand, 10108493 - 10108439
Alignment:
Q  11 gatgaaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||||||||||||||||||||| |||||| ||||||||||| ||||||||||||    
T  10108493 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatctaa 10108439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 65
Target Start/End: Complemental strand, 14820417 - 14820363
Alignment:
Q  11 gatgaaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||||||||||||||||||||| |||||| ||||||||||| ||||||||||||    
T  14820417 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatctaa 14820363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 65
Target Start/End: Original strand, 10171406 - 10171452
Alignment:
Q  19 gagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||||    
T  10171406 gagggaccaaaagtgaaagaatctaaaattacagggacaaaatctaa 10171452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 65
Target Start/End: Original strand, 26136948 - 26136994
Alignment:
Q  19 gagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||||||||||||| |||||||||||||||||| ||||||||||||    
T  26136948 gagggaccaaaagtggaagaatctgaaattacagggacaaaatctaa 26136994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 65
Target Start/End: Original strand, 30789762 - 30789816
Alignment:
Q  11 gatgaaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||||| || |||||||||||| |||||||||||||||||| ||||||||||||    
T  30789762 gatgaaacgatggaccaaaagtggaagaatctgaaattacagggacaaaatctaa 30789816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 65
Target Start/End: Complemental strand, 21148051 - 21148006
Alignment:
Q  20 agggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    |||||||||||||| |||||||||||||||||| ||||||||||||    
T  21148051 agggaccaaaagtggaagaatctgaaattacagggacaaaatctaa 21148006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 65
Target Start/End: Complemental strand, 42113105 - 42113053
Alignment:
Q  13 tgaaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||| |||||||||||||||||||||||| ||||||||| |||| |||||||    
T  42113105 tgaaatgagggaccaaaagtgaaagaatcttaaattacagggacataatctaa 42113053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 65
Target Start/End: Complemental strand, 2583443 - 2583389
Alignment:
Q  11 gatgaaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    |||||||||||||| |||||||  ||||||| |||||||||| ||||||||||||    
T  2583443 gatgaaaggagggatcaaaagtagaagaatccgaaattacagggacaaaatctaa 2583389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 65
Target Start/End: Original strand, 17623142 - 17623196
Alignment:
Q  11 gatgaaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||||||||| ||||||||||| |||||| ||||||||||  ||||||||||||    
T  17623142 gatgaaaggagtgaccaaaagtggaagaatttgaaattacaaggacaaaatctaa 17623196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 65
Target Start/End: Original strand, 21148191 - 21148245
Alignment:
Q  11 gatgaaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||||||||||||| ||||||| |||||| ||||||||||  ||||||||||||    
T  21148191 gatgaaaggagggactaaaagtggaagaatatgaaattacaaggacaaaatctaa 21148245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 65
Target Start/End: Complemental strand, 42605872 - 42605822
Alignment:
Q  15 aaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||||||||||||||||| |||||| ||||||||||| || |||||||||    
T  42605872 aaaggagggaccaaaagtggaagaatatgaaattacagggataaaatctaa 42605822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 65
Target Start/End: Complemental strand, 43851779 - 43851733
Alignment:
Q  19 gagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    |||||| |||||||| |||||||||||||||||| ||||||||||||    
T  43851779 gagggatcaaaagtggaagaatctgaaattacagggacaaaatctaa 43851733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 65
Target Start/End: Original strand, 5555133 - 5555178
Alignment:
Q  20 agggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    |||||||||||||| |||||| ||||||||||| ||||||||||||    
T  5555133 agggaccaaaagtggaagaatatgaaattacagggacaaaatctaa 5555178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 65
Target Start/End: Original strand, 10108634 - 10108679
Alignment:
Q  20 agggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    |||||||||||||| |||||| ||||||||||| ||||||||||||    
T  10108634 agggaccaaaagtggaagaatatgaaattacagggacaaaatctaa 10108679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 65
Target Start/End: Complemental strand, 14767621 - 14767576
Alignment:
Q  20 agggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    |||||||||||||| || ||||||||||||||| ||||||||||||    
T  14767621 agggaccaaaagtggaaaaatctgaaattacagggacaaaatctaa 14767576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 65
Target Start/End: Original strand, 14820558 - 14820603
Alignment:
Q  20 agggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    |||||||||||||| |||||| ||||||||||| ||||||||||||    
T  14820558 agggaccaaaagtggaagaatatgaaattacagggacaaaatctaa 14820603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 61
Target Start/End: Original strand, 18044089 - 18044134
Alignment:
Q  16 aaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaat 61  Q
    ||||||||| |||||| |||||||||||||||||||| ||||||||    
T  18044089 aaggagggatcaaaagcgaaagaatctgaaattacagggacaaaat 18044134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 63
Target Start/End: Complemental strand, 5554992 - 5554940
Alignment:
Q  11 gatgaaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaatct 63  Q
    |||||||| |||||||||||||| |||||| |||||||| || ||||||||||    
T  5554992 gatgaaagaagggaccaaaagtggaagaatatgaaattatagggacaaaatct 5554940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 51
Target Start/End: Complemental strand, 7689646 - 7689606
Alignment:
Q  11 gatgaaaggagggaccaaaagtgaaagaatctgaaattaca 51  Q
    ||||||| ||||||||||||||| |||||||||||||||||    
T  7689646 gatgaaaagagggaccaaaagtggaagaatctgaaattaca 7689606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 65
Target Start/End: Complemental strand, 30789628 - 30789576
Alignment:
Q  13 tgaaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||| |||||| |||||||| | |||||||||||||||| ||||||||||||    
T  30789628 tgaaatgagggatcaaaagtggaggaatctgaaattacagagacaaaatctaa 30789576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 13 - 52
Target Start/End: Complemental strand, 22848439 - 22848400
Alignment:
Q  13 tgaaaggagggaccaaaagtgaaagaatctgaaattacag 52  Q
    ||||| |||||||||||| |||||||||||||||||||||    
T  22848439 tgaaacgagggaccaaaaatgaaagaatctgaaattacag 22848400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 61
Target Start/End: Original strand, 7689786 - 7689828
Alignment:
Q  19 gagggaccaaaagtgaaagaatctgaaattacagtgacaaaat 61  Q
    |||||| |||||||| |||||||||||||||||| ||||||||    
T  7689786 gagggatcaaaagtggaagaatctgaaattacagggacaaaat 7689828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 65
Target Start/End: Original strand, 22494647 - 22494693
Alignment:
Q  19 gagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||||||||||||| |||||| ||||||||||| |||||| |||||    
T  22494647 gagggaccaaaagtggaagaatttgaaattacagggacaaattctaa 22494693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 65
Target Start/End: Complemental strand, 26136808 - 26136754
Alignment:
Q  11 gatgaaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    |||||||||||| | ||||| || |||||||||||||||||  ||||||||||||    
T  26136808 gatgaaaggaggaatcaaaattggaagaatctgaaattacaaggacaaaatctaa 26136754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 65
Target Start/End: Original strand, 42113239 - 42113293
Alignment:
Q  11 gatgaaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    |||||||||||||| |||||||| |||||| |||||||| || |||| |||||||    
T  42113239 gatgaaaggagggatcaaaagtggaagaatttgaaattaaagggacataatctaa 42113293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 60
Target Start/End: Original strand, 43851919 - 43851968
Alignment:
Q  11 gatgaaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaa 60  Q
    ||||||||||||||| ||||||| ||||||||  |||||||| |||||||    
T  43851919 gatgaaaggagggacaaaaagtggaagaatcttgaattacagagacaaaa 43851968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 65
Target Start/End: Original strand, 7126172 - 7126226
Alignment:
Q  11 gatgaaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||||||||||||||||||||| |||||| ||||||||||| ||||||||||||    
T  7126172 gatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatctaa 7126226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 65
Target Start/End: Complemental strand, 24074426 - 24074372
Alignment:
Q  11 gatgaaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||||||||||||||||||||| |||||| ||||||||||| ||||||||||||    
T  24074426 gatgaaaggagggaccaaaagtggaagaatatgaaattacagagacaaaatctaa 24074372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 65
Target Start/End: Original strand, 41001608 - 41001662
Alignment:
Q  11 gatgaaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||||||||||||||||||||| ||||||||||||||| || ||||||||||||    
T  41001608 gatgaaaggagggaccaaaagtggaagaatctgaaattatagggacaaaatctaa 41001662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 15 - 65
Target Start/End: Original strand, 994005 - 994055
Alignment:
Q  15 aaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||||||||||||||||| ||||||||| |||||||| ||||||||||||    
T  994005 aaaggagggaccaaaagtggaagaatctgcaattacagggacaaaatctaa 994055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 65
Target Start/End: Original strand, 4919245 - 4919299
Alignment:
Q  11 gatgaaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    |||||||||||||| |||||||  |||||||||||||||||| ||||||||||||    
T  4919245 gatgaaaggagggatcaaaagtagaagaatctgaaattacagggacaaaatctaa 4919299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 65
Target Start/End: Original strand, 6817376 - 6817430
Alignment:
Q  11 gatgaaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||||||||| ||||||||||| |||||| ||||||||||| ||||||||||||    
T  6817376 gatgaaaggagtgaccaaaagtggaagaatatgaaattacagggacaaaatctaa 6817430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 61
Target Start/End: Complemental strand, 14411820 - 14411770
Alignment:
Q  11 gatgaaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaat 61  Q
    ||||||||||||||||||||||| |||||||||||||||||  ||||||||    
T  14411820 gatgaaaggagggaccaaaagtggaagaatctgaaattacatagacaaaat 14411770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 65
Target Start/End: Complemental strand, 18336591 - 18336537
Alignment:
Q  11 gatgaaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    |||||||||||||| |||||| | |||||||||||||||||| ||||||||||||    
T  18336591 gatgaaaggagggatcaaaagcggaagaatctgaaattacagggacaaaatctaa 18336537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 82 - 135
Target Start/End: Complemental strand, 30512338 - 30512285
Alignment:
Q  82 actaaaatcaaaattcactaatattacggggacgaaaatagatatttatccttt 135  Q
    ||||||| ||||||||||||||||||| |||||||||| ||||||||| |||||    
T  30512338 actaaaaccaaaattcactaatattacagggacgaaaagagatatttacccttt 30512285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 82 - 135
Target Start/End: Complemental strand, 30552678 - 30552625
Alignment:
Q  82 actaaaatcaaaattcactaatattacggggacgaaaatagatatttatccttt 135  Q
    ||||||| ||||||||||||||||||| |||||||||| ||||||||| |||||    
T  30552678 actaaaaccaaaattcactaatattacagggacgaaaagagatatttacccttt 30552625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 65
Target Start/End: Complemental strand, 31799754 - 31799709
Alignment:
Q  20 agggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    |||||||||||||| |||||||||||||||||| ||||||||||||    
T  31799754 agggaccaaaagtggaagaatctgaaattacagggacaaaatctaa 31799709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 65
Target Start/End: Original strand, 23979158 - 23979210
Alignment:
Q  13 tgaaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||| ||||||||||||||| |||||| ||||||||||| ||||||||||||    
T  23979158 tgaaatgagggaccaaaagtggaagaatttgaaattacagggacaaaatctaa 23979210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 65
Target Start/End: Complemental strand, 4919105 - 4919059
Alignment:
Q  19 gagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||||||||||||| |||||| ||||||||||| ||||||||||||    
T  4919105 gagggaccaaaagtggaagaatatgaaattacagggacaaaatctaa 4919059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 65
Target Start/End: Complemental strand, 14144024 - 14143970
Alignment:
Q  11 gatgaaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||||| |||| |||||||||| |||||| ||||||||||| ||||||||||||    
T  14144024 gatgaaatgaggtaccaaaagtggaagaatatgaaattacagggacaaaatctaa 14143970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 61
Target Start/End: Complemental strand, 17762401 - 17762355
Alignment:
Q  15 aaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaat 61  Q
    ||||||||||||||||||| ||||||||||||||||||  |||||||    
T  17762401 aaaggagggaccaaaagtggaagaatctgaaattacaggaacaaaat 17762355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 65
Target Start/End: Original strand, 24837424 - 24837478
Alignment:
Q  11 gatgaaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    |||||||||||||| |||||||  |||||| ||||||||||| ||||||||||||    
T  24837424 gatgaaaggagggagcaaaagtagaagaatttgaaattacagggacaaaatctaa 24837478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 65
Target Start/End: Original strand, 31799895 - 31799949
Alignment:
Q  11 gatgaaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    |||||||||||||| |||||| | |||||||||||||||||  ||||||||||||    
T  31799895 gatgaaaggagggatcaaaagaggaagaatctgaaattacatggacaaaatctaa 31799949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 65
Target Start/End: Complemental strand, 7126031 - 7125986
Alignment:
Q  20 agggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    |||||||||||||| ||||||||||||||| || ||||||||||||    
T  7126031 agggaccaaaagtggaagaatctgaaattatagggacaaaatctaa 7125986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 65
Target Start/End: Original strand, 14144165 - 14144210
Alignment:
Q  20 agggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    |||||||||||||| |||||| ||||||||||| ||||||||||||    
T  14144165 agggaccaaaagtggaagaatttgaaattacagggacaaaatctaa 14144210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 65
Target Start/End: Original strand, 18336720 - 18336765
Alignment:
Q  20 agggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||| |||||||| |||||||||||||||||| ||||||||||||    
T  18336720 agggatcaaaagtggaagaatctgaaattacagggacaaaatctaa 18336765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 64
Target Start/End: Original strand, 24650954 - 24651007
Alignment:
Q  11 gatgaaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaatcta 64  Q
    |||||||||||||| |||||||| |||||||| ||||||||| || ||||||||    
T  24650954 gatgaaaggagggatcaaaagtggaagaatctaaaattacagggataaaatcta 24651007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 27159104 - 27159063
Alignment:
Q  20 agggaccaaaagtgaaagaatctgaaattacagtgacaaaat 61  Q
    |||||||||||||| |||||||||||||||||| ||||||||    
T  27159104 agggaccaaaagtggaagaatctgaaattacagggacaaaat 27159063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 65
Target Start/End: Original strand, 29445070 - 29445115
Alignment:
Q  20 agggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    |||||||||||||| |||||||||||||||||  ||||||||||||    
T  29445070 agggaccaaaagtggaagaatctgaaattacaaggacaaaatctaa 29445115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 65
Target Start/End: Complemental strand, 6817243 - 6817191
Alignment:
Q  13 tgaaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||| ||||||||||||||| |||||||||||||||||  |||| |||||||    
T  6817243 tgaaatgagggaccaaaagtggaagaatctgaaattacatggacataatctaa 6817191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 65
Target Start/End: Complemental strand, 20709333 - 20709281
Alignment:
Q  13 tgaaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||| ||||||||||||||| |||||| ||||||||||| |||| |||||||    
T  20709333 tgaaatgagggaccaaaagtggaagaatttgaaattacagggacagaatctaa 20709281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 65
Target Start/End: Complemental strand, 41001465 - 41001422
Alignment:
Q  22 ggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    |||||||||||| |||||| ||||||||||| ||||||||||||    
T  41001465 ggaccaaaagtggaagaatatgaaattacagggacaaaatctaa 41001422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 65
Target Start/End: Original strand, 14411929 - 14411975
Alignment:
Q  19 gagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||||||||| ||| |||||||||||||||||  ||||||||||||    
T  14411929 gagggaccaaacgtggaagaatctgaaattacaaggacaaaatctaa 14411975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 65
Target Start/End: Original strand, 17762545 - 17762591
Alignment:
Q  19 gagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||||||||||||| |||||||||||||||  | ||||||||||||    
T  17762545 gagggaccaaaagtggaagaatctgaaattatggggacaaaatctaa 17762591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 65
Target Start/End: Original strand, 20709467 - 20709521
Alignment:
Q  11 gatgaaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    |||||||||| |||| ||||||| |||||| ||||||||||  ||||||||||||    
T  20709467 gatgaaaggaaggacaaaaagtggaagaatatgaaattacatggacaaaatctaa 20709521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 65
Target Start/End: Complemental strand, 24837284 - 24837238
Alignment:
Q  19 gagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||||||||||||| |||||| ||||||||||  ||||||||||||    
T  24837284 gagggaccaaaagtggaagaatatgaaattacaaggacaaaatctaa 24837238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 65
Target Start/End: Original strand, 27159212 - 27159266
Alignment:
Q  11 gatgaaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    |||||||| ||||||||||| || |||||| | ||||||||| ||||||||||||    
T  27159212 gatgaaagaagggaccaaaaatggaagaatataaaattacagggacaaaatctaa 27159266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 65
Target Start/End: Complemental strand, 29444929 - 29444875
Alignment:
Q  11 gatgaaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||||||||||||||||||||  |||||| ||||||||||  |||| |||||||    
T  29444929 gatgaaaggagggaccaaaagtagaagaatatgaaattacaaggacataatctaa 29444875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 65
Target Start/End: Complemental strand, 30512402 - 30512356
Alignment:
Q  19 gagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||||||||||||| || ||||||||||||||| ||| ||||||||    
T  30512402 gagggaccaaaagtggaaaaatctgaaattacagggaccaaatctaa 30512356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 65
Target Start/End: Complemental strand, 30552742 - 30552696
Alignment:
Q  19 gagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||||||||||||| || ||||||||||||||| ||| ||||||||    
T  30552742 gagggaccaaaagtggaaaaatctgaaattacagggaccaaatctaa 30552696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 65
Target Start/End: Original strand, 24074566 - 24074611
Alignment:
Q  20 agggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    |||||||||||||| |||||| ||||||||||  ||||||||||||    
T  24074566 agggaccaaaagtggaagaatatgaaattacaaggacaaaatctaa 24074611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 65
Target Start/End: Complemental strand, 22571198 - 22571146
Alignment:
Q  13 tgaaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||| ||||||||||||||| |||||| ||||||||||| || | |||||||    
T  22571198 tgaaatgagggaccaaaagtggaagaatatgaaattacagagatataatctaa 22571146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 63
Target Start/End: Original strand, 15887 - 15939
Alignment:
Q  11 gatgaaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaatct 63  Q
    ||||||||||| |||||||||||||||||| ||||||||||| ||||||||||    
T  15887 gatgaaaggagagaccaaaagtgaaagaatatgaaattacagggacaaaatct 15939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0185 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 11 - 51
Target Start/End: Original strand, 4124 - 4164
Alignment:
Q  11 gatgaaaggagggaccaaaagtgaaagaatctgaaattaca 51  Q
    |||||||||||||||||||| ||||||||||||||||||||    
T  4124 gatgaaaggagggaccaaaaatgaaagaatctgaaattaca 4164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0449 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0449
Description:

Target: scaffold0449; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 65
Target Start/End: Original strand, 7454 - 7508
Alignment:
Q  11 gatgaaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||||||||  ||||||||||  |||||||||||||||||| ||||||||||||    
T  7454 gatgaaaggatagaccaaaagtagaagaatctgaaattacagggacaaaatctaa 7508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0449; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 65
Target Start/End: Complemental strand, 7341 - 7295
Alignment:
Q  19 gagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    |||||||| |||||| |||||| ||||||||||| ||||||||||||    
T  7341 gagggaccgaaagtggaagaatatgaaattacagggacaaaatctaa 7295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 65
Target Start/End: Original strand, 8585 - 8631
Alignment:
Q  19 gagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||||||||||||| |||||||| ||||||||| ||||||||||||    
T  8585 gagggaccaaaagtggaagaatctaaaattacagggacaaaatctaa 8631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 11 - 65
Target Start/End: Complemental strand, 8446 - 8394
Alignment:
Q  11 gatgaaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||||||||| |||||||||||||||||||||  ||||| | ||||||||||||    
T  8446 gatgaaaggagagaccaaaagtgaaagaatctg--attactgggacaaaatctaa 8394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0477 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0477
Description:

Target: scaffold0477; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 65
Target Start/End: Original strand, 5011 - 5057
Alignment:
Q  19 gagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||||||||||||| |||||||| ||||||||| ||| ||||||||    
T  5011 gagggaccaaaagtggaagaatctaaaattacagggactaaatctaa 5057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 61
Target Start/End: Complemental strand, 4682 - 4636
Alignment:
Q  15 aaaggagggaccaaaagtgaaagaatctgaaattacagtgacaaaat 61  Q
    ||||||||||||||||||  |||||||| ||||||||| ||||||||    
T  4682 aaaggagggaccaaaagtagaagaatctcaaattacagggacaaaat 4636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 65
Target Start/End: Original strand, 4826 - 4872
Alignment:
Q  19 gagggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    ||||||||||||||| |||||| ||||||||||  ||||||||||||    
T  4826 gagggaccaaaagtggaagaatatgaaattacaaggacaaaatctaa 4872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 65
Target Start/End: Complemental strand, 4781 - 4736
Alignment:
Q  20 agggaccaaaagtgaaagaatctgaaattacagtgacaaaatctaa 65  Q
    |||||||||||||| | |||||||||||||||| |||| |||||||    
T  4781 agggaccaaaagtggaggaatctgaaattacagggacagaatctaa 4736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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