View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16146_low_3 (Length: 487)

Name: NF16146_low_3
Description: NF16146
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16146_low_3
NF16146_low_3
[»] chr1 (37 HSPs)
chr1 (14-479)||(46146169-46146621)
chr1 (77-189)||(51814493-51814605)
chr1 (69-188)||(9165152-9165271)
chr1 (91-193)||(4824966-4825068)
chr1 (69-188)||(952511-952630)
chr1 (69-191)||(40257396-40257518)
chr1 (77-185)||(24730387-24730495)
chr1 (69-188)||(52116738-52116857)
chr1 (95-185)||(15786303-15786393)
chr1 (69-189)||(8177139-8177259)
chr1 (104-188)||(19528319-19528403)
chr1 (74-188)||(15064962-15065079)
chr1 (69-188)||(16893394-16893513)
chr1 (69-188)||(31605805-31605924)
chr1 (117-188)||(51703779-51703850)
chr1 (70-188)||(10526823-10526941)
chr1 (96-186)||(33700757-33700847)
chr1 (71-188)||(18037572-18037689)
chr1 (136-189)||(45235403-45235456)
chr1 (96-188)||(19940856-19940948)
chr1 (69-105)||(39979167-39979203)
chr1 (69-157)||(40810498-40810586)
chr1 (121-189)||(41508830-41508898)
chr1 (69-188)||(2799862-2799981)
chr1 (118-189)||(37046984-37047054)
chr1 (145-188)||(37310009-37310052)
chr1 (69-188)||(44961765-44961884)
chr1 (69-167)||(9643766-9643864)
chr1 (102-188)||(15581132-15581217)
chr1 (69-186)||(17296986-17297104)
chr1 (136-185)||(26232410-26232459)
chr1 (69-189)||(6650594-6650714)
chr1 (91-183)||(17424469-17424561)
chr1 (94-188)||(21694446-21694537)
chr1 (69-189)||(25297771-25297891)
chr1 (117-181)||(27223135-27223199)
chr1 (117-189)||(36371469-36371541)
[»] chr8 (26 HSPs)
chr8 (69-189)||(28783059-28783179)
chr8 (69-186)||(2203494-2203611)
chr8 (69-190)||(16852338-16852459)
chr8 (69-187)||(29858006-29858124)
chr8 (69-189)||(8484998-8485118)
chr8 (69-189)||(11793478-11793598)
chr8 (69-188)||(968362-968481)
chr8 (69-188)||(18540298-18540417)
chr8 (73-167)||(6536541-6536635)
chr8 (117-186)||(3624582-3624651)
chr8 (136-193)||(5801042-5801099)
chr8 (69-189)||(4830486-4830606)
chr8 (69-188)||(20994414-20994534)
chr8 (69-185)||(34966807-34966923)
chr8 (113-188)||(23361650-23361725)
chr8 (113-188)||(30483885-30483960)
chr8 (98-188)||(6530807-6530896)
chr8 (117-190)||(19703492-19703565)
chr8 (116-193)||(26688860-26688937)
chr8 (117-190)||(35641906-35641979)
chr8 (104-185)||(36205198-36205279)
chr8 (91-190)||(3058028-3058127)
chr8 (69-188)||(8059632-8059751)
chr8 (136-190)||(5264542-5264596)
chr8 (70-188)||(29431011-29431129)
chr8 (69-185)||(11492030-11492146)
[»] chr2 (25 HSPs)
chr2 (69-189)||(37480074-37480194)
chr2 (69-188)||(42327352-42327471)
chr2 (69-192)||(42602550-42602673)
chr2 (96-190)||(3697384-3697477)
chr2 (69-188)||(26482093-26482211)
chr2 (69-188)||(41908595-41908714)
chr2 (69-191)||(29503268-29503389)
chr2 (96-188)||(19016031-19016123)
chr2 (69-189)||(21213768-21213888)
chr2 (136-188)||(26545840-26545892)
chr2 (69-188)||(23052480-23052599)
chr2 (72-185)||(14780509-14780622)
chr2 (69-188)||(15825673-15825789)
chr2 (69-190)||(30808604-30808725)
chr2 (136-188)||(4439003-4439055)
chr2 (118-190)||(19322766-19322838)
chr2 (136-187)||(37755995-37756046)
chr2 (69-187)||(16918535-16918653)
chr2 (117-187)||(23465926-23465996)
chr2 (95-188)||(42922414-42922508)
chr2 (95-188)||(19244109-19244202)
chr2 (70-190)||(34041546-34041666)
chr2 (92-188)||(28846691-28846787)
chr2 (117-189)||(39714991-39715063)
chr2 (69-129)||(42222940-42223000)
[»] chr5 (23 HSPs)
chr5 (69-189)||(29692343-29692463)
chr5 (91-191)||(30883177-30883277)
chr5 (69-188)||(8278232-8278351)
chr5 (69-188)||(16457810-16457929)
chr5 (69-188)||(16773807-16773926)
chr5 (69-159)||(84853-84943)
chr5 (69-191)||(30109266-30109387)
chr5 (95-189)||(34984805-34984899)
chr5 (71-188)||(22661214-22661331)
chr5 (136-188)||(14495829-14495881)
chr5 (69-188)||(21589288-21589407)
chr5 (111-189)||(5005749-5005825)
chr5 (117-188)||(21549142-21549213)
chr5 (69-188)||(29075781-29075900)
chr5 (101-188)||(31669014-31669100)
chr5 (118-191)||(87429-87502)
chr5 (69-186)||(18595958-18596075)
chr5 (136-189)||(22020886-22020939)
chr5 (69-189)||(22737081-22737201)
chr5 (71-132)||(35705042-35705103)
chr5 (136-184)||(12883844-12883892)
chr5 (69-169)||(17761312-17761412)
chr5 (136-188)||(41797836-41797888)
[»] chr6 (13 HSPs)
chr6 (69-188)||(30127400-30127519)
chr6 (69-189)||(33549103-33549223)
chr6 (69-190)||(31622948-31623069)
chr6 (70-188)||(14557962-14558079)
chr6 (69-188)||(24333982-24334101)
chr6 (69-188)||(21418470-21418589)
chr6 (69-167)||(6385883-6385981)
chr6 (71-189)||(12188262-12188380)
chr6 (70-188)||(24641148-24641266)
chr6 (117-190)||(10338179-10338252)
chr6 (117-190)||(12234512-12234585)
chr6 (136-184)||(6776631-6776679)
chr6 (137-185)||(13441053-13441101)
[»] chr7 (33 HSPs)
chr7 (69-191)||(17040969-17041091)
chr7 (69-191)||(11720917-11721039)
chr7 (95-188)||(22760863-22760956)
chr7 (69-189)||(2446307-2446427)
chr7 (69-188)||(25590611-25590730)
chr7 (120-186)||(21854550-21854616)
chr7 (69-189)||(41487361-41487478)
chr7 (69-189)||(30579334-30579454)
chr7 (69-188)||(26459367-26459486)
chr7 (69-188)||(43590907-43591026)
chr7 (69-188)||(48125132-48125250)
chr7 (69-188)||(48771938-48772057)
chr7 (68-188)||(5579190-5579310)
chr7 (96-188)||(31835192-31835284)
chr7 (117-189)||(43215183-43215255)
chr7 (69-189)||(45709665-45709785)
chr7 (117-188)||(7801180-7801251)
chr7 (69-152)||(9183148-9183231)
chr7 (122-188)||(25021345-25021411)
chr7 (69-146)||(21558170-21558247)
chr7 (69-186)||(29385700-29385817)
chr7 (69-186)||(44628141-44628257)
chr7 (96-188)||(27776172-27776264)
chr7 (69-164)||(279911-280005)
chr7 (69-188)||(5273547-5273666)
chr7 (69-188)||(15137553-15137672)
chr7 (110-185)||(20952147-20952222)
chr7 (69-188)||(39631844-39631963)
chr7 (91-189)||(18056754-18056852)
chr7 (91-189)||(38374578-38374676)
chr7 (71-188)||(20335790-20335907)
chr7 (136-188)||(4161288-4161340)
chr7 (70-189)||(33460380-33460500)
[»] chr4 (31 HSPs)
chr4 (69-189)||(51250479-51250599)
chr4 (77-188)||(39509070-39509181)
chr4 (77-188)||(55427165-55427276)
chr4 (69-185)||(7292755-7292871)
chr4 (77-188)||(19238542-19238653)
chr4 (69-188)||(37109308-37109427)
chr4 (74-188)||(46295097-46295211)
chr4 (69-188)||(28635696-28635815)
chr4 (71-167)||(38869789-38869885)
chr4 (69-189)||(7949411-7949531)
chr4 (136-188)||(9241049-9241101)
chr4 (117-185)||(41346968-41347036)
chr4 (113-181)||(43728402-43728470)
chr4 (121-188)||(1730498-1730565)
chr4 (69-192)||(18404840-18404963)
chr4 (91-190)||(21344815-21344913)
chr4 (70-189)||(37720172-37720291)
chr4 (152-190)||(6606056-6606094)
chr4 (69-167)||(16581714-16581812)
chr4 (137-191)||(21660169-21660223)
chr4 (137-191)||(21668933-21668987)
chr4 (139-189)||(27965537-27965587)
chr4 (69-167)||(30938176-30938274)
chr4 (69-159)||(46329193-46329283)
chr4 (69-193)||(2184989-2185114)
chr4 (91-188)||(5795388-5795485)
chr4 (69-186)||(40283943-40284060)
chr4 (137-185)||(3350480-3350528)
chr4 (152-184)||(4911272-4911304)
chr4 (140-188)||(20608922-20608970)
chr4 (69-189)||(25414172-25414291)
[»] scaffold0258 (1 HSPs)
scaffold0258 (70-188)||(15281-15399)
[»] chr3 (36 HSPs)
chr3 (95-189)||(15048044-15048138)
chr3 (72-189)||(44743815-44743926)
chr3 (95-188)||(28703387-28703480)
chr3 (69-190)||(30311304-30311425)
chr3 (73-181)||(4844472-4844580)
chr3 (73-181)||(4870168-4870276)
chr3 (69-189)||(10499066-10499186)
chr3 (95-158)||(8501556-8501619)
chr3 (69-188)||(14339610-14339729)
chr3 (69-188)||(51903835-51903954)
chr3 (69-191)||(30232327-30232449)
chr3 (136-190)||(36720379-36720433)
chr3 (69-187)||(47454574-47454692)
chr3 (69-189)||(40268488-40268607)
chr3 (117-188)||(4222141-4222212)
chr3 (95-185)||(53412948-53413038)
chr3 (96-189)||(5499391-5499484)
chr3 (136-189)||(31520629-31520682)
chr3 (91-176)||(47236950-47237035)
chr3 (69-181)||(2667869-2667981)
chr3 (69-189)||(46518627-46518747)
chr3 (140-188)||(47079701-47079749)
chr3 (91-185)||(17034991-17035083)
chr3 (110-181)||(42465528-42465599)
chr3 (96-186)||(10682928-10683017)
chr3 (69-159)||(54990731-54990821)
chr3 (69-190)||(11642166-11642287)
chr3 (117-158)||(39253727-39253768)
chr3 (91-188)||(47810723-47810820)
chr3 (136-188)||(2597244-2597296)
chr3 (69-165)||(8853756-8853852)
chr3 (69-188)||(10445096-10445216)
chr3 (96-180)||(11612307-11612391)
chr3 (113-185)||(13808886-13808958)
chr3 (69-185)||(15034348-15034463)
chr3 (136-188)||(31788994-31789046)
[»] scaffold1367 (1 HSPs)
scaffold1367 (117-182)||(845-910)
[»] scaffold0002 (1 HSPs)
scaffold0002 (96-185)||(94955-95044)
[»] scaffold0172 (1 HSPs)
scaffold0172 (69-189)||(15734-15854)
[»] scaffold0417 (1 HSPs)
scaffold0417 (145-189)||(10218-10262)
[»] scaffold0047 (1 HSPs)
scaffold0047 (84-188)||(14944-15047)
[»] scaffold0032 (1 HSPs)
scaffold0032 (68-188)||(112282-112402)
[»] scaffold0291 (1 HSPs)
scaffold0291 (117-188)||(2475-2546)
[»] scaffold0211 (1 HSPs)
scaffold0211 (73-188)||(24053-24168)
[»] scaffold0118 (1 HSPs)
scaffold0118 (69-188)||(41590-41709)
[»] scaffold0070 (1 HSPs)
scaffold0070 (69-188)||(42478-42596)
[»] scaffold0299 (1 HSPs)
scaffold0299 (117-182)||(11534-11599)
[»] scaffold0194 (1 HSPs)
scaffold0194 (91-184)||(13025-13118)


Alignment Details
Target: chr1 (Bit Score: 406; Significance: 0; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 406; E-Value: 0
Query Start/End: Original strand, 14 - 479
Target Start/End: Original strand, 46146169 - 46146621
Alignment:
Q  14 gcaagtaccttaataagaaaaaatattcatcatagacggcagattaaagctctacttttgaagaagctatattaacacacccaaattggcaccgaggata 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  46146169 gcaagtaccttaataagaaaaaatattcatcatagacggcagattaaagctctacttttgaagaagctatattaacacacccaaattggcaccgaggaaa 46146268  T
Q  114 attgaacctgagactttgaaggggagcacattcccagatcccaagctaataccatcagaccaacccaagtgggtttatgttatatatgtttagttaaatt 213  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||              
T  46146269 attgaacctgagactttgaaggggagcacattcccagatcccaagctaataccatcggaccaacccaagtgggtttatgttatatatgtt---------- 46146358  T
Q  214 gtttattcaaacagaactttaatcaacaagatatgttacaacatctagcaggcaagcatcaaagagaaagaggaactattgtagtatagattgtaaaagt 313  Q
       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46146359 ---tattcaaacagaactttaatcaacaagatatgttacaacatctagcaggcaagcatcaaagagaaagaggaactattgtagtatagattgtaaaagt 46146455  T
Q  314 agagaagtgaaatgaaggtatactcacgctaaaccttcagctgcaccaactgttatgctcattcttctaggccaatctagtaaacaatctgaagcaagtt 413  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  46146456 agagaagtgaaatgaaggtatactcacgctaaaccttcagctgcaccaactgttatgctcattcttctaggccaatcaagtaaacaatctgaagcaagtt 46146555  T
Q  414 gaccatgtaaatgagtgagcaagctatgattaggcatgtaatcatacacaattaacctttcatctc 479  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  46146556 gaccatgtaaatgagtgagcaagctatgattagacatgtaatcatacacaattaacctttcatctc 46146621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 77 - 189
Target Start/End: Complemental strand, 51814605 - 51814493
Alignment:
Q  77 aagctatattaacacacccaaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccatcagaccaa 176  Q
    |||||| |||| | |||||||||||||||||  || ||| ||||||||||| |||| | |||||||| || |||||| ||||  ||||||||||| ||||    
T  51814605 aagctaaattagcccacccaaattggcaccggagagaatcgaacctgagaccttgaggaggagcacactctcagatctcaagtcaataccatcaggccaa 51814506  T
Q  177 cccaagtgggttt 189  Q
    |||||||||||||    
T  51814505 cccaagtgggttt 51814493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 69 - 188
Target Start/End: Original strand, 9165152 - 9165271
Alignment:
Q  69 ttttgaagaagctatattaacacacccaaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccat 168  Q
    |||||||||| ||| | |||| | | ||||||||||||   || |||||||||||||||||||| | |||||||| |||||| |||||||| |||||||     
T  9165152 ttttgaagaaactaaagtaaccccctcaaattggcaccagagagaattgaacctgagactttgaggaggagcacactcccaggtcccaagccaataccac 9165251  T
Q  169 cagaccaacccaagtgggtt 188  Q
     || ||||||||||||||||    
T  9165252 taggccaacccaagtgggtt 9165271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 91 - 193
Target Start/End: Complemental strand, 4825068 - 4824966
Alignment:
Q  91 cacccaaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccatcagaccaacccaagtgggttta 190  Q
    |||||||||| |||||  ||| |||  |||||||||| |||||| |||||||| ||| || |||||||| || ||||||||||||||||||||| |||||    
T  4825068 cacccaaattagcaccacggagaatcaaacctgagaccttgaagaggagcacactccaaggtcccaagccaacaccatcagaccaacccaagtgtgttta 4824969  T
Q  191 tgt 193  Q
    |||    
T  4824968 tgt 4824966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 69 - 188
Target Start/End: Complemental strand, 952630 - 952511
Alignment:
Q  69 ttttgaagaagctatattaacacacccaaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccat 168  Q
    |||||| ||||||| |||||| |||| |||||| || || ||| |||  ||||||||||||||| |  ||||||| |||||| |||||||| || ||||     
T  952630 ttttgacgaagctaaattaacccacctaaattgacatcggggagaatctaacctgagactttgaggatgagcacactcccaggtcccaagccaacaccac 952531  T
Q  169 cagaccaacccaagtgggtt 188  Q
    ||||||||| ||||||||||    
T  952530 cagaccaactcaagtgggtt 952511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 69 - 191
Target Start/End: Complemental strand, 40257518 - 40257396
Alignment:
Q  69 ttttgaagaagctatattaacacacccaaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccat 168  Q
    |||||||||||||| | || | ||||||||||| |||||   | |||||||| |||||| | || | |||||||| |||||| || ||||| |||||||     
T  40257518 ttttgaagaagctaaactagcccacccaaattgacaccggatagaattgaacttgagacctcgaggaggagcacactcccaggtctcaagccaataccac 40257419  T
Q  169 cagaccaacccaagtgggtttat 191  Q
    ||| |||||||||||||||||||    
T  40257418 caggccaacccaagtgggtttat 40257396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 77 - 185
Target Start/End: Complemental strand, 24730495 - 24730387
Alignment:
Q  77 aagctatattaacacacccaaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccatcagaccaa 176  Q
    |||||| |||| | |||||||||||||||||||||  ||  |||||| ||| |||||| |||||||| ||||||||| ||||  |||||||  || ||||    
T  24730495 aagctaaattagcccacccaaattggcaccgaggaggatcaaacctgggaccttgaagaggagcacactcccagatctcaagacaataccactaggccaa 24730396  T
Q  177 cccaagtgg 185  Q
    |||||||||    
T  24730395 cccaagtgg 24730387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 69 - 188
Target Start/End: Original strand, 52116738 - 52116857
Alignment:
Q  69 ttttgaagaagctatattaacacacccaaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccat 168  Q
    |||| ||||||||| |||| | ||||  |||||||||   ||| ||||||||||||||| |||| | |||||||| |||||  |||||||| |||||||     
T  52116738 tttttaagaagctaaattagcccaccttaattggcactagggagaattgaacctgagacattgaggaggagcacactcccaagtcccaagccaataccac 52116837  T
Q  169 cagaccaacccaagtgggtt 188  Q
    ||| ||||||||| ||||||    
T  52116838 caggccaacccaactgggtt 52116857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 95 - 185
Target Start/End: Original strand, 15786303 - 15786393
Alignment:
Q  95 caaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccatcagaccaacccaagtgg 185  Q
    ||||||| |||| | || ||| ||||||||||| |||| | |||||||| ||||||||||||||| ||||| |  ||||||||||||||||    
T  15786303 caaattgacaccaaagagaatcgaacctgagaccttgaggaggagcacactcccagatcccaagccaatactactagaccaacccaagtgg 15786393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 69 - 189
Target Start/End: Original strand, 8177139 - 8177259
Alignment:
Q  69 ttttgaagaagctatattaacacacccaaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccat 168  Q
    |||||||||||||| | |||| | | ||||||||||||   || ||| |||||||| || |||| | |||||||| ||||||||||||||| |||||||     
T  8177139 ttttgaagaagctaaactaaccccctcaaattggcaccagagagaatcgaacctgaaaccttgaggaggagcacactcccagatcccaagccaataccac 8177238  T
Q  169 cagaccaacccaagtgggttt 189  Q
     || ||||| ||| |||||||    
T  8177239 taggccaactcaaatgggttt 8177259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 104 - 188
Target Start/End: Original strand, 19528319 - 19528403
Alignment:
Q  104 accgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccatcagaccaacccaagtgggtt 188  Q
    |||| ||| ||| ||||||||||| |||| | |||||||| ||  ||||||||||| ||||||| ||| ||||||||||||||||    
T  19528319 accggggagaatcgaacctgagaccttgaggaggagcacactcatagatcccaagccaataccaccaggccaacccaagtgggtt 19528403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 74 - 188
Target Start/End: Complemental strand, 15065079 - 15064962
Alignment:
Q  74 aagaagctatattaacacacccaaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcc---caagctaataccatca 170  Q
    ||||||||| |||| | ||||||||||| ||||| ||| ||||||||||||||| |||| |  ||||||| || ||| |||    |||| |||| |||||    
T  15065079 aagaagctaaattagcccacccaaattgacaccggggaaaattgaacctgagaccttgaggatgagcacactctcaggtcctaagaagccaatatcatca 15064980  T
Q  171 gaccaacccaagtgggtt 188  Q
    | ||||||||||||||||    
T  15064979 ggccaacccaagtgggtt 15064962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 69 - 188
Target Start/End: Complemental strand, 16893513 - 16893394
Alignment:
Q  69 ttttgaagaagctatattaacacacccaaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccat 168  Q
    |||||||||||||| |||| | ||| ||||||| |||||  || ||| ||||||||||| | || | |||| ||| ||||| ||| ||||| |||||||     
T  16893513 ttttgaagaagctaaattagcccactcaaattgacaccggagaaaatcgaacctgagacctcgaggaggagtacactcccaaatctcaagccaataccaa 16893414  T
Q  169 cagaccaacccaagtgggtt 188  Q
    |||  |||||||||||||||    
T  16893413 caggtcaacccaagtgggtt 16893394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 69 - 188
Target Start/End: Original strand, 31605805 - 31605924
Alignment:
Q  69 ttttgaagaagctatattaacacacccaaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccat 168  Q
    ||||||||| |||| | || | ||||||||||||||||| ||| ||| |||| |||||| |||| | |||||||| | | || |||||||| || |||||    
T  31605805 ttttgaagaggctaaactagcccacccaaattggcaccggggagaatcgaacttgagaccttgaggaggagcacacttcaaggtcccaagccaacaccat 31605904  T
Q  169 cagaccaacccaagtgggtt 188  Q
    ||| |||||  |||||||||    
T  31605905 caggccaacataagtgggtt 31605924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 117 - 188
Target Start/End: Complemental strand, 51703850 - 51703779
Alignment:
Q  117 gaacctgagactttgaaggggagcacattcccagatcccaagctaataccatcagaccaacccaagtgggtt 188  Q
    |||||||| ||||||| | |||||||| |||||||| |||||| |||||||  |||||||||||| ||||||    
T  51703850 gaacctgaaactttgaggaggagcacactcccagattccaagccaataccactagaccaacccaaatgggtt 51703779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 70 - 188
Target Start/End: Complemental strand, 10526941 - 10526823
Alignment:
Q  70 tttgaagaagctatattaacacacccaaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccatc 169  Q
    ||||||||||||| |||||| ||||||||||| | ||   || ||| ||| ||||||| |||| | |||||| | |||||| |||||||| |||||||      
T  10526941 tttgaagaagctaaattaacccacccaaattgactccagagagaatcgaatctgagaccttgaggaggagcaaactcccaggtcccaagccaataccact 10526842  T
Q  170 agaccaacccaagtgggtt 188  Q
     ||||||||||| ||||||    
T  10526841 ggaccaacccaaatgggtt 10526823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 96 - 186
Target Start/End: Original strand, 33700757 - 33700847
Alignment:
Q  96 aaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccatcagaccaacccaagtggg 186  Q
    |||||||||||   || ||| ||||||||||| |||| | |||||||| |||||||| |||||| |||||||  || ||||||||||||||    
T  33700757 aaattggcaccagagagaatcgaacctgagaccttgaggaggagcacactcccagattccaagccaataccactaggccaacccaagtggg 33700847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 71 - 188
Target Start/End: Original strand, 18037572 - 18037689
Alignment:
Q  71 ttgaagaagctatattaacacacccaaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccatca 170  Q
    |||||||||||| |||| | |||| |||| |||||||  || ||| |||| |||||  | |||  |||||||| |||||  |||||| | |||| |||||    
T  18037572 ttgaagaagctaaattagcccacctaaatcggcaccggagagaatcgaacttgagatctcgaaaaggagcacactcccaagtcccaaaccaatatcatca 18037671  T
Q  171 gaccaacccaagtgggtt 188  Q
    ||||||||||||||||||    
T  18037672 gaccaacccaagtgggtt 18037689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 136 - 189
Target Start/End: Original strand, 45235403 - 45235456
Alignment:
Q  136 ggagcacattcccagatcccaagctaataccatcagaccaacccaagtgggttt 189  Q
    |||||||| |||||  |||||| | |||||||||||||||||||||||||||||    
T  45235403 ggagcacactcccaagtcccaaaccaataccatcagaccaacccaagtgggttt 45235456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 96 - 188
Target Start/End: Original strand, 19940856 - 19940948
Alignment:
Q  96 aaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccatcagaccaacccaagtgggtt 188  Q
    ||||||||||||  || |||  |||||||||| || | | |||||||| ||| ||  |||||||||| |||| ||||||||||||||||||||    
T  19940856 aaattggcaccggagagaatcaaacctgagaccttaaggaggagcacactccaaggacccaagctaacaccaccagaccaacccaagtgggtt 19940948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 69 - 105
Target Start/End: Complemental strand, 39979203 - 39979167
Alignment:
Q  69 ttttgaagaagctatattaacacacccaaattggcac 105  Q
    |||||||||||||| ||||||||||||||||||||||    
T  39979203 ttttgaagaagctaaattaacacacccaaattggcac 39979167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 69 - 157
Target Start/End: Complemental strand, 40810586 - 40810498
Alignment:
Q  69 ttttgaagaagctatattaacacacccaaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaa 157  Q
    |||||||||||||| | |||| | | ||||||||||||   || ||| ||||||||||| |||||| ||| |||| |||||||||||||    
T  40810586 ttttgaagaagctaaactaaccctctcaaattggcaccagagagaatcgaacctgagaccttgaagaggaacacactcccagatcccaa 40810498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 121 - 189
Target Start/End: Complemental strand, 41508898 - 41508830
Alignment:
Q  121 ctgagactttgaaggggagcacattcccagatcccaagctaataccatcagaccaacccaagtgggttt 189  Q
    ||||||| |||| | |||||||| ||||||||||||| | | ||||| ||| |||||||||||||||||    
T  41508898 ctgagaccttgaggaggagcacactcccagatcccaaaccagtaccaccaggccaacccaagtgggttt 41508830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 69 - 188
Target Start/End: Complemental strand, 2799981 - 2799862
Alignment:
Q  69 ttttgaagaagctatattaacacacccaaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccat 168  Q
    |||||||||||||| | |||| | | ||||||||||||   || ||| ||||||||||| |||| | |||||||| ||||||||| |||||  ||||||     
T  2799981 ttttgaagaagctaaactaaccccctcaaattggcaccagagagaatcgaacctgagaccttgaggaggagcacactcccagatctcaagcctataccac 2799882  T
Q  169 cagaccaacccaagtgggtt 188  Q
     || |||| | |||||||||    
T  2799881 taggccaagcgaagtgggtt 2799862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 118 - 189
Target Start/End: Complemental strand, 37047054 - 37046984
Alignment:
Q  118 aacctgagactttgaaggggagcacattcccagatcccaagctaataccatcagaccaacccaagtgggttt 189  Q
    |||||||||| |||| | |||||||| ||| || |||||||| || |||| |||||||||||||||||||||    
T  37047054 aacctgagaccttga-gaggagcacactccaaggtcccaagccaacaccaccagaccaacccaagtgggttt 37046984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 145 - 188
Target Start/End: Original strand, 37310009 - 37310052
Alignment:
Q  145 tcccagatcccaagctaataccatcagaccaacccaagtgggtt 188  Q
    |||||||||| |||||||||||| ||| ||||||||||||||||    
T  37310009 tcccagatccgaagctaataccaccaggccaacccaagtgggtt 37310052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 69 - 188
Target Start/End: Complemental strand, 44961884 - 44961765
Alignment:
Q  69 ttttgaagaagctatattaacacacccaaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccat 168  Q
    |||| ||||||||| |||| | ||||||||||| |||    || ||| |||||||||||  ||| | |||||||| ||  | ||| |||||||||||||     
T  44961884 tttttaagaagctaaattagcccacccaaattgacactagagagaatcgaacctgagaccctgaggaggagcacactcttaaatctcaagctaataccac 44961785  T
Q  169 cagaccaacccaagtgggtt 188  Q
    | ||||||||||||||||||    
T  44961784 ctgaccaacccaagtgggtt 44961765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 69 - 167
Target Start/End: Original strand, 9643766 - 9643864
Alignment:
Q  69 ttttgaagaagctatattaacacacccaaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaatacca 167  Q
    ||||||||||| || ||||||  ||  |||||| |||||  |||||||||| ||||||| |||| |  || |||| ||||||||||||||| |||||||    
T  9643766 ttttgaagaagttaaattaacctacaaaaattgacaccggagataattgaatctgagaccttgaggatgaacacactcccagatcccaagccaatacca 9643864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 102 - 188
Target Start/End: Original strand, 15581132 - 15581217
Alignment:
Q  102 gcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccatcagaccaacccaagtgggtt 188  Q
    |||||| ||| ||||||||||||||| || | | |||||||| ||| || |||||||| || |||| ||| ||||||||||||||||    
T  15581132 gcaccggggagaattgaacctgagaccttta-gaggagcacactccaaggtcccaagccaacaccaccaggccaacccaagtgggtt 15581217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 69 - 186
Target Start/End: Complemental strand, 17297104 - 17296986
Alignment:
Q  69 ttttgaagaagctatattaacacacccaaattggcacc-gaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaatacca 167  Q
    |||| ||||||||| |||| | |||||||||||||||| | ||| |||  ||| |||||| |||| | |||||||| ||| || ||||||||||  ||||    
T  17297104 ttttaaagaagctaaattagcccacccaaattggcaccgggggagaatcaaacatgagaccttgaggaggagcacactccaaggtcccaagctaccacca 17297005  T
Q  168 tcagaccaacccaagtggg 186  Q
      || ||||||||||||||    
T  17297004 caagcccaacccaagtggg 17296986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 136 - 185
Target Start/End: Original strand, 26232410 - 26232459
Alignment:
Q  136 ggagcacattcccagatcccaagctaataccatcagaccaacccaagtgg 185  Q
    |||||||| ||||||||| ||||| |||||||  ||||||||||||||||    
T  26232410 ggagcacactcccagatctcaagccaataccactagaccaacccaagtgg 26232459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 69 - 189
Target Start/End: Complemental strand, 6650714 - 6650594
Alignment:
Q  69 ttttgaagaagctatattaacacacccaaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccat 168  Q
    |||||||||||||| | |||  |||| |||||| ||||   || ||| ||||||||||| |||| | |||||| | |||| |||||||||| |||||||     
T  6650714 ttttgaagaagctaaactaatccacctaaattgacaccagagagaatcgaacctgagacattgaggaggagcatactccccgatcccaagccaataccac 6650615  T
Q  169 cagaccaacccaagtgggttt 189  Q
     || |||||| || |||||||    
T  6650614 taggccaacctaattgggttt 6650594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 91 - 183
Target Start/End: Original strand, 17424469 - 17424561
Alignment:
Q  91 cacccaaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccatcagaccaacccaagt 183  Q
    |||||||||||||||||| |||||| ||| ||| ||| || | | |||||| | ||| || || || | ||| ||||||||||||||||||||    
T  17424469 cacccaaattggcaccgaagataatcgaaactgggaccttaacgaggagcatactccaaggtctcacgttaacaccatcagaccaacccaagt 17424561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 94 - 188
Target Start/End: Complemental strand, 21694537 - 21694446
Alignment:
Q  94 ccaaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccatcagaccaacccaagtgggtt 188  Q
    |||||||||||| ||| | ||| ||||||||||| ||||   |||||||| |||||  || ||||| ||||||| |||  |||||||||||||||    
T  21694537 ccaaattggcactgagaagaatcgaacctgagaccttga---ggagcacactcccaagtctcaagccaataccaccaggtcaacccaagtgggtt 21694446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 69 - 189
Target Start/End: Complemental strand, 25297891 - 25297771
Alignment:
Q  69 ttttgaagaagctatattaacacacccaaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccat 168  Q
    |||||||||||||| |||| | |||| |||||| | |||  || |||  ||||| |||| | || | |||||||| || ||||||| |||  |||||||     
T  25297891 ttttgaagaagctaaattatcccacctaaattgacgccggtgagaatcaaacctcagacctcgaggaggagcacactctcagatcctaagtcaataccac 25297792  T
Q  169 cagaccaacccaagtgggttt 189  Q
     ||||||||||||||||||||    
T  25297791 tagaccaacccaagtgggttt 25297771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 117 - 181
Target Start/End: Original strand, 27223135 - 27223199
Alignment:
Q  117 gaacctgagactttgaaggggagcacattcccagatcccaagctaataccatcagaccaacccaa 181  Q
    ||||||||||| ||||||  ||||||| |||||||||| |||  |||||||||| || |||||||    
T  27223135 gaacctgagaccttgaagaagagcacactcccagatcctaagtcaataccatcaaacaaacccaa 27223199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 117 - 189
Target Start/End: Complemental strand, 36371541 - 36371469
Alignment:
Q  117 gaacctgagactttgaaggggagcacattcccagatcccaagctaataccatcagaccaacccaagtgggttt 189  Q
    |||||| |||| |||| | |||||||| |||||| | |||||| |||||||  || |||||||||||||||||    
T  36371541 gaacctcagaccttgaggaggagcacactcccaggttccaagccaataccactaggccaacccaagtgggttt 36371469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 57; Significance: 1e-23; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 69 - 189
Target Start/End: Complemental strand, 28783179 - 28783059
Alignment:
Q  69 ttttgaagaagctatattaacacacccaaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccat 168  Q
    |||||||||||||| |||| | ||||||||||||||||||||| ||| |||| |||||| |||| | |||||||| |||||| || ||||| |||||||     
T  28783179 ttttgaagaagctaaattagcccacccaaattggcaccgaggagaatcgaacatgagaccttgaggaggagcacactcccaggtctcaagccaataccac 28783080  T
Q  169 cagaccaacccaagtgggttt 189  Q
    ||  |||||||||||||||||    
T  28783079 caagccaacccaagtgggttt 28783059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 69 - 186
Target Start/End: Complemental strand, 2203611 - 2203494
Alignment:
Q  69 ttttgaagaagctatattaacacacccaaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccat 168  Q
    ||||||| |||||| |||| | ||||||||||||||||| ||| |||||| |||||||| |||| | |||||||| |||||| |||||||| |||||||     
T  2203611 ttttgaataagctaaattagcccacccaaattggcaccggggagaattgaccctgagaccttgaggaggagcacactcccaggtcccaagccaataccac 2203512  T
Q  169 cagaccaacccaagtggg 186  Q
     || ||||||||||||||    
T  2203511 taggccaacccaagtggg 2203494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 69 - 190
Target Start/End: Complemental strand, 16852459 - 16852338
Alignment:
Q  69 ttttgaagaagctatattaacacacccaaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccat 168  Q
    |||||||||||||| | || | |||| ||||||||||  |||| ||| ||||||||||| | || | |||||||| |||||| |||||||| |||||||     
T  16852459 ttttgaagaagctaaaatagcccacctaaattggcactaaggagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaataccac 16852360  T
Q  169 cagaccaacccaagtgggttta 190  Q
     || ||||||||||||||||||    
T  16852359 taggccaacccaagtgggttta 16852338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 69 - 187
Target Start/End: Original strand, 29858006 - 29858124
Alignment:
Q  69 ttttgaagaagctatattaacacacccaaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccat 168  Q
    ||||||| |||||| |||| | |||| |||||||||||||||  ||| ||||||||||| | || | |||||||| |||| | |||||||| |||||||     
T  29858006 ttttgaaaaagctaaattagcccacctaaattggcaccgaggggaatcgaacctgagacctcgaggaggagcacactccctggtcccaagccaataccac 29858105  T
Q  169 cagaccaacccaagtgggt 187  Q
    ||| |||| ||||||||||    
T  29858106 caggccaatccaagtgggt 29858124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 69 - 189
Target Start/End: Complemental strand, 8485118 - 8484998
Alignment:
Q  69 ttttgaagaagctatattaacacacccaaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccat 168  Q
    |||||||||||||| |||| | |||| ||||||||||||  || ||| |||  |||||| |  ||| |||||||| || ||| |||||||| |||||||     
T  8485118 ttttgaagaagctaaattagcccacctaaattggcaccggagagaatcgaaaatgagacctcaaagaggagcacactcacaggtcccaagcaaataccac 8485019  T
Q  169 cagaccaacccaagtgggttt 189  Q
    ||| |||||||||||||||||    
T  8485018 caggccaacccaagtgggttt 8484998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 69 - 189
Target Start/End: Original strand, 11793478 - 11793598
Alignment:
Q  69 ttttgaagaagctatattaacacacccaaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccat 168  Q
    |||||||||||||| | || | ||||||||||||||||| | | |||  ||||| |||| |||| | |||||||| ||| || |||||||| || ||||     
T  11793478 ttttgaagaagctaaactagcccacccaaattggcaccgggaagaatcaaacctaagaccttgaggaggagcacactccaaggtcccaagcgaacaccac 11793577  T
Q  169 cagaccaacccaagtgggttt 189  Q
     ||||||||||||||||||||    
T  11793578 aagaccaacccaagtgggttt 11793598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 69 - 188
Target Start/End: Complemental strand, 968481 - 968362
Alignment:
Q  69 ttttgaagaagctatattaacacacccaaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccat 168  Q
    |||| ||||||||| |||| | |||| ||||||||| ||  || ||| ||||||||||| | || | |||||||| |||||| |||||||| |||||||     
T  968481 tttttaagaagctaaattagcccacctaaattggcatcggagagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaataccac 968382  T
Q  169 cagaccaacccaagtgggtt 188  Q
    ||| ||||| ||||||||||    
T  968381 caggccaactcaagtgggtt 968362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 69 - 188
Target Start/End: Complemental strand, 18540417 - 18540298
Alignment:
Q  69 ttttgaagaagctatattaacacacccaaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccat 168  Q
    |||||||||||||| |||||| | | ||||||||||||   || ||| ||||||||||| |||| | | || ||| |||||| |||||||| |||||||     
T  18540417 ttttgaagaagctaaattaaccctctcaaattggcaccagagagaatcgaacctgagaccttgaggagaagtacactcccaggtcccaagccaataccac 18540318  T
Q  169 cagaccaacccaagtgggtt 188  Q
     || ||||||||||||||||    
T  18540317 taggccaacccaagtgggtt 18540298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 73 - 167
Target Start/End: Complemental strand, 6536635 - 6536541
Alignment:
Q  73 gaagaagctatattaacacacccaaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaatacca 167  Q
    |||||||||| |||||| |||| |||||||||||   || ||||||||||||||| |||| | |||||||| ||| || |||||||| |||||||    
T  6536635 gaagaagctaaattaacccacctaaattggcaccagagagaattgaacctgagaccttgaggaggagcacactcctaggtcccaagccaatacca 6536541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 117 - 186
Target Start/End: Complemental strand, 3624651 - 3624582
Alignment:
Q  117 gaacctgagactttgaaggggagcacattcccagatcccaagctaataccatcagaccaacccaagtggg 186  Q
    ||||||||||| |||||| |||||||| |||||| |||||||| |||||||  || ||||||||||||||    
T  3624651 gaacctgagaccttgaagaggagcacactcccaggtcccaagccaataccactaggccaacccaagtggg 3624582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 136 - 193
Target Start/End: Complemental strand, 5801099 - 5801042
Alignment:
Q  136 ggagcacattcccagatcccaagctaataccatcagaccaacccaagtgggtttatgt 193  Q
    |||||||| ||| ||||||||||||||||||| |||  ||||||||||||||||||||    
T  5801099 ggagcacactcctagatcccaagctaataccaccaggtcaacccaagtgggtttatgt 5801042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 69 - 189
Target Start/End: Complemental strand, 4830606 - 4830486
Alignment:
Q  69 ttttgaagaagctatattaacacacccaaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccat 168  Q
    |||||||||||||| |||||  || |||||||| |||||   | | ||||||||||||| | || | ||| |||| || |||||||||| | |||||||     
T  4830606 ttttgaagaagctaaattaatccatccaaattgacaccgtataaatttgaacctgagacctcgaggaggaacacactctcagatcccaaacaaataccac 4830507  T
Q  169 cagaccaacccaagtgggttt 189  Q
    ||| |||||||||||||||||    
T  4830506 caggccaacccaagtgggttt 4830486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 69 - 188
Target Start/End: Original strand, 20994414 - 20994534
Alignment:
Q  69 ttttgaagaagctatattaacacacccaaattggcaccgaggataattgaacctgagactttgaagg-ggagcacattcccagatcccaagctaatacca 167  Q
    |||| ||||||||| |||| | || ||||||||| |||   |||||| || ||||||||||||| || |||||||| |||||| |||||||  |||||||    
T  20994414 tttttaagaagctaaattagcccatccaaattggtaccagagataatcgatcctgagactttgagggaggagcacactcccaggtcccaagtcaatacca 20994513  T
Q  168 tcagaccaacccaagtgggtt 188  Q
      || ||||||||||||||||    
T  20994514 ctaggccaacccaagtgggtt 20994534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 69 - 185
Target Start/End: Original strand, 34966807 - 34966923
Alignment:
Q  69 ttttgaagaagctatattaacacacccaaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccat 168  Q
    |||||||||||||| |||| | |||| ||| || ||||| |||||||  ||| |||||| | |||| | |||||| |||||  || ||||| ||||||||    
T  34966807 ttttgaagaagctaaattagcccacctaaaatgccaccggggataatcaaacttgagacctcgaagagtagcacactcccaagtctcaagccaataccat 34966906  T
Q  169 cagaccaacccaagtgg 185  Q
    ||||||||| |||||||    
T  34966907 cagaccaactcaagtgg 34966923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 113 - 188
Target Start/End: Original strand, 23361650 - 23361725
Alignment:
Q  113 aattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccatcagaccaacccaagtgggtt 188  Q
    ||||||||||||||| |||| | |||||||| ||||| ||||||||  ||||||| |||  |||||||||||||||    
T  23361650 aattgaacctgagaccttgaggaggagcacactcccatatcccaagtcaataccaccaggtcaacccaagtgggtt 23361725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 113 - 188
Target Start/End: Original strand, 30483885 - 30483960
Alignment:
Q  113 aattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccatcagaccaacccaagtgggtt 188  Q
    |||||||||||||||| ||| | |||||||| ||||| ||||||||| |||||||   | ||||||||||||||||    
T  30483885 aattgaacctgagactctgaggaggagcacactcccatatcccaagccaataccactgggccaacccaagtgggtt 30483960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 98 - 188
Target Start/End: Complemental strand, 6530896 - 6530807
Alignment:
Q  98 attggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccatcagaccaacccaagtgggtt 188  Q
    |||||||||| ||| ||| ||||||||||| |||| | |||||||| ||| || |||||||| || |||| ||| ||||||||||||||||    
T  6530896 attggcaccggggagaatcgaacctgagacattga-gaggagcacactcctaggtcccaagccaacaccaccaggccaacccaagtgggtt 6530807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 117 - 190
Target Start/End: Original strand, 19703492 - 19703565
Alignment:
Q  117 gaacctgagactttgaaggggagcacattcccagatcccaagctaataccatcagaccaacccaagtgggttta 190  Q
    ||||||||||| |||| | |||||||| || ||| |||||||| |||||||  || ||||||||||||||||||    
T  19703492 gaacctgagaccttgaggaggagcacactctcaggtcccaagccaataccactaggccaacccaagtgggttta 19703565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 116 - 193
Target Start/End: Complemental strand, 26688937 - 26688860
Alignment:
Q  116 tgaacctgagactttgaaggggagcacattcccagatcccaagctaataccatcagaccaacccaagtgggtttatgt 193  Q
    |||||||||||| |||| | |||||||| ||| || |||||||| || |||| ||| |||||||||||||||| ||||    
T  26688937 tgaacctgagaccttgaggaggagcacactccaaggtcccaagccaacaccaccaggccaacccaagtgggttgatgt 26688860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 117 - 190
Target Start/End: Original strand, 35641906 - 35641979
Alignment:
Q  117 gaacctgagactttgaaggggagcacattcccagatcccaagctaataccatcagaccaacccaagtgggttta 190  Q
    ||||||||||| | || | |||||||| ||||| ||| |||||  |||||| ||||||||||||||||||||||    
T  35641906 gaacctgagacatcgaggaggagcacactcccaaatctcaagccgataccaccagaccaacccaagtgggttta 35641979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 104 - 185
Target Start/End: Complemental strand, 36205279 - 36205198
Alignment:
Q  104 accgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccatcagaccaacccaagtgg 185  Q
    |||| ||| ||| |||| |||||| |||| | |||||||| ||||||||| ||| | |||| ||||||||||||||||||||    
T  36205279 accggggagaatcgaacatgagaccttgaggaggagcacactcccagatctcaaaccaataacatcagaccaacccaagtgg 36205198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 91 - 190
Target Start/End: Original strand, 3058028 - 3058127
Alignment:
Q  91 cacccaaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccatcagaccaacccaagtgggttta 190  Q
    |||| |||||| | |||| || ||| ||||||||||| ||| || |||||||| |||||   ||||| | ||||||| ||||||||||||| ||||||||    
T  3058028 cacctaaattgacgccgaagagaatcgaacctgagaccttgcagaggagcacactcccaagacccaaaccaataccaccagaccaacccaaatgggttta 3058127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 69 - 188
Target Start/End: Complemental strand, 8059751 - 8059632
Alignment:
Q  69 ttttgaagaagctatattaacacacccaaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccat 168  Q
    |||||||||||||| | || | ||| ||||||| || |  ||| ||| ||||||||||| |||| | ||| |||| || || || |||||  ||||||||    
T  8059751 ttttgaagaagctaaactagctcactcaaattgacatcagggagaatggaacctgagaccttgaggaggatcacactctcacatgccaagtcaataccat 8059652  T
Q  169 cagaccaacccaagtgggtt 188  Q
    ||| ||||||||||||||||    
T  8059651 caggccaacccaagtgggtt 8059632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 136 - 190
Target Start/End: Complemental strand, 5264596 - 5264542
Alignment:
Q  136 ggagcacattcccagatcccaagctaataccatcagaccaacccaagtgggttta 190  Q
    ||||||||||||||| | |||||| |||||||  || ||||||||||||||||||    
T  5264596 ggagcacattcccaggttccaagccaataccactaggccaacccaagtgggttta 5264542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 70 - 188
Target Start/End: Complemental strand, 29431129 - 29431011
Alignment:
Q  70 tttgaagaagctatattaacacacccaaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccatc 169  Q
    ||||||||||||| |||| | ||| |||||| ||||| | || ||| ||||||||| | |  | | |||||||| |||||  |||||||| ||||||  |    
T  29431129 tttgaagaagctaaattagcccactcaaattagcaccaaagagaatcgaacctgaggcctcaaggaggagcacactcccaagtcccaagccaataccgcc 29431030  T
Q  170 agaccaacccaagtgggtt 188  Q
    || ||||||||||||||||    
T  29431029 aggccaacccaagtgggtt 29431011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 69 - 185
Target Start/End: Original strand, 11492030 - 11492146
Alignment:
Q  69 ttttgaagaagctatattaacacacccaaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccat 168  Q
    |||| ||||||||| |||| | ||||||||||| ||| || || ||| |||||| |||| | ||   |||||||| ||||||||| ||||| ||||||      
T  11492030 tttttaagaagctaaattagcccacccaaattgacactgaagagaatcgaacctaagacctcgagaaggagcacactcccagatctcaagccaataccga 11492129  T
Q  169 cagaccaacccaagtgg 185  Q
    ||  |||||||||||||    
T  11492130 catgccaacccaagtgg 11492146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 57; Significance: 1e-23; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 69 - 189
Target Start/End: Complemental strand, 37480194 - 37480074
Alignment:
Q  69 ttttgaagaagctatattaacacacccaaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccat 168  Q
    |||||||||||||| |||| | |||||||||||| |||| ||| ||| ||||||||||| |||| | |||||||| || ||| |||||||| |||||||     
T  37480194 ttttgaagaagctaaattagcccacccaaattgggaccggggagaatcgaacctgagaccttgaggaggagcacactctcaggtcccaagccaataccac 37480095  T
Q  169 cagaccaacccaagtgggttt 189  Q
    ||| |||||||||||||||||    
T  37480094 caggccaacccaagtgggttt 37480074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 69 - 188
Target Start/End: Original strand, 42327352 - 42327471
Alignment:
Q  69 ttttgaagaagctatattaacacacccaaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccat 168  Q
    |||| |||| |||| |||| | |||||||||||||||||| || ||| ||||||||||| |||| | |||||||| |||||| |||||||| |||||||     
T  42327352 tttttaagatgctaaattagcccacccaaattggcaccgaagagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagccaataccac 42327451  T
Q  169 cagaccaacccaagtgggtt 188  Q
     || ||||||||||||||||    
T  42327452 taggccaacccaagtgggtt 42327471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 69 - 192
Target Start/End: Complemental strand, 42602673 - 42602550
Alignment:
Q  69 ttttgaagaagctatattaacacacccaaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccat 168  Q
    |||||||||||||| |||| | |||||||||||||||||  || |||  ||||| |||| ||||   |||||||| |||||| |||||||| |||||||     
T  42602673 ttttgaagaagctaaattagcccacccaaattggcaccggagagaatcaaacctaagaccttgagaaggagcacactcccaggtcccaagccaataccac 42602574  T
Q  169 cagaccaacccaagtgggtttatg 192  Q
     || ||||||||||||||||||||    
T  42602573 taggccaacccaagtgggtttatg 42602550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 96 - 190
Target Start/End: Original strand, 3697384 - 3697477
Alignment:
Q  96 aaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccatcagaccaacccaagtgggttta 190  Q
    |||||||||||||||| ||| ||||| ||||| |||| | |||||||  ||| || |||||||| ||||||||||||||||||||||||||||||    
T  3697384 aaattggcaccgaggagaatcgaaccagagaccttga-gaggagcactctccaaggtcccaagccaataccatcagaccaacccaagtgggttta 3697477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 69 - 188
Target Start/End: Complemental strand, 26482211 - 26482093
Alignment:
Q  69 ttttgaagaagctatattaacacacccaaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccat 168  Q
    |||||||||||| | |||| | |||  |||||||||| ||||| ||| ||||||||||| ||| || |||||||| ||| || |||||||| || |||||    
T  26482211 ttttgaagaagccaaattagcccactgaaattggcactgaggagaatcgaacctgagaccttg-agaggagcacactcctaggtcccaagccaacaccat 26482113  T
Q  169 cagaccaacccaagtgggtt 188  Q
    ||| |||||| |||||||||    
T  26482112 caggccaacctaagtgggtt 26482093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 69 - 188
Target Start/End: Original strand, 41908595 - 41908714
Alignment:
Q  69 ttttgaagaagctatattaacacacccaaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccat 168  Q
    |||||||||||||| | || | ||||||||||||||||| ||||||| |||| |||||| |||| | |||||||| ||| || || ||| |  | ||||     
T  41908595 ttttgaagaagctaaactagcccacccaaattggcaccggggataatcgaacttgagaccttgaggaggagcacactccaaggtctcaaaccgacaccac 41908694  T
Q  169 cagaccaacccaagtgggtt 188  Q
    ||| ||||||||||||||||    
T  41908695 caggccaacccaagtgggtt 41908714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 69 - 191
Target Start/End: Complemental strand, 29503389 - 29503268
Alignment:
Q  69 ttttgaagaagctatattaacacacccaaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccat 168  Q
    |||||||||||||| |||  | |||  |||||| ||||| ||| ||| ||||||||||| |||| | |||||||| |||||| |||||| | |||||||     
T  29503389 ttttgaagaagctaaatttgcccacttaaattgacaccg-ggagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaaaccaataccac 29503291  T
Q  169 cagaccaacccaagtgggtttat 191  Q
     || |||||||||||||||||||    
T  29503290 taggccaacccaagtgggtttat 29503268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 96 - 188
Target Start/End: Complemental strand, 19016123 - 19016031
Alignment:
Q  96 aaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccatcagaccaacccaagtgggtt 188  Q
    |||||||||||| ||| |||  ||| |||||| | || | |||||||| |||||  || ||||| ||||||||||||||||||||||||||||    
T  19016123 aaattggcaccggggagaatcaaacttgagacctcgaggaggagcacactcccaagtctcaagccaataccatcagaccaacccaagtgggtt 19016031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 69 - 189
Target Start/End: Complemental strand, 21213888 - 21213768
Alignment:
Q  69 ttttgaagaagctatattaacacacccaaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccat 168  Q
    |||||||||||| | | || | |||| |||||||||||| ||| ||| ||||||||||| |  | | ||| |||| |||||| |||||||| |||||||     
T  21213888 ttttgaagaagcaaaactagcccacctaaattggcaccggggagaatcgaacctgagacctcaaggaggaacacactcccaggtcccaagccaataccac 21213789  T
Q  169 cagaccaacccaagtgggttt 189  Q
    |||||||||||| | ||||||    
T  21213788 cagaccaacccatgcgggttt 21213768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 136 - 188
Target Start/End: Complemental strand, 26545892 - 26545840
Alignment:
Q  136 ggagcacattcccagatcccaagctaataccatcagaccaacccaagtgggtt 188  Q
    |||||||| | ||||||||||||||||||||| || |||||||||||||||||    
T  26545892 ggagcacacttccagatcccaagctaataccaccaaaccaacccaagtgggtt 26545840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 69 - 188
Target Start/End: Original strand, 23052480 - 23052599
Alignment:
Q  69 ttttgaagaagctatattaacacacccaaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccat 168  Q
    |||||||||| ||| |||| | |||||||| ||||||   ||| ||| ||||||||||| |||| | | |||||| |||||  |||||||| |||||||     
T  23052480 ttttgaagaaactaaattagcccacccaaactggcactagggagaatcgaacctgagaccttgaggagaagcacactcccaagtcccaagccaataccac 23052579  T
Q  169 cagaccaacccaagtgggtt 188  Q
    ||| |||||| |||||||||    
T  23052580 caggccaacctaagtgggtt 23052599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 72 - 185
Target Start/End: Complemental strand, 14780622 - 14780509
Alignment:
Q  72 tgaagaagctatattaacacacccaaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccatcag 171  Q
    ||||||||||| |||| | ||| |||||||||| || |||  || ||||||||||| |||||  ||||||||||| || ||| ||||  ||||| | | |    
T  14780622 tgaagaagctaaattagcccactcaaattggcatcggggaggatcgaacctgagaccttgaaaaggagcacattctcaaatctcaagtcaatactaccgg 14780523  T
Q  172 accaacccaagtgg 185  Q
    ||||||||||||||    
T  14780522 accaacccaagtgg 14780509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 69 - 188
Target Start/End: Original strand, 15825673 - 15825789
Alignment:
Q  69 ttttgaagaagctatattaacacacccaaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccat 168  Q
    |||| ||||||||| |||| | ||  ||||||| |||||| || |||||||||||||| || ||   |||||||| ||||| ||| ||| |||||||||     
T  15825673 tttttaagaagctaaattagctcaatcaaattgacaccgaagagaattgaacctgagatttcga---ggagcacactcccaaatctcaaactaataccac 15825769  T
Q  169 cagaccaacccaagtgggtt 188  Q
    ||||||||| |||| |||||    
T  15825770 cagaccaactcaagcgggtt 15825789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 69 - 190
Target Start/End: Original strand, 30808604 - 30808725
Alignment:
Q  69 ttttgaagaagctatattaacacacccaaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccat 168  Q
    ||||||| |||||| ||||   |||| || |||| ||||| || ||| ||| ||||||| |||| | |||||| |||| ||| || ||||| |||| ||     
T  30808604 ttttgaaaaagctaaattagtccacctaagttggtaccgaagagaatcgaaactgagaccttgaggaggagcatattctcaggtctcaagccaatatcac 30808703  T
Q  169 cagaccaacccaagtgggttta 190  Q
    ||||||||||||||||||||||    
T  30808704 cagaccaacccaagtgggttta 30808725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 136 - 188
Target Start/End: Original strand, 4439003 - 4439055
Alignment:
Q  136 ggagcacattcccagatcccaagctaataccatcagaccaacccaagtgggtt 188  Q
    |||||||| || ||||||||||| ||||||||| || ||||||||||||||||    
T  4439003 ggagcacactctcagatcccaagttaataccattaggccaacccaagtgggtt 4439055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 118 - 190
Target Start/End: Complemental strand, 19322838 - 19322766
Alignment:
Q  118 aacctgagactttgaaggggagcacattcccagatcccaagctaataccatcagaccaacccaagtgggttta 190  Q
    |||| ||||| |||||| |||||||| |||||| |||||| | |||||||  ||| |||||||||||||||||    
T  19322838 aaccagagaccttgaagaggagcacactcccaggtcccaaaccaataccactagatcaacccaagtgggttta 19322766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 136 - 187
Target Start/End: Original strand, 37755995 - 37756046
Alignment:
Q  136 ggagcacattcccagatcccaagctaataccatcagaccaacccaagtgggt 187  Q
    ||||||||||||||| |||||||| ||||||| ||  |||||||||||||||    
T  37755995 ggagcacattcccaggtcccaagccaataccaccaagccaacccaagtgggt 37756046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 69 - 187
Target Start/End: Original strand, 16918535 - 16918653
Alignment:
Q  69 ttttgaagaagctatattaacacacccaaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccat 168  Q
    |||||||||||||| | |||  || ||||| |||||||   || |||  ||||| |||| |||| | |||||||| ||||||||||||| | |||||||     
T  16918535 ttttgaagaagctaaactaaaccatccaaagtggcaccagagagaatccaacctaagaccttgaggaggagcacactcccagatcccaaaccaataccac 16918634  T
Q  169 cagaccaacccaagtgggt 187  Q
     || |||||||||||||||    
T  16918635 taggccaacccaagtgggt 16918653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 117 - 187
Target Start/End: Original strand, 23465926 - 23465996
Alignment:
Q  117 gaacctgagactttgaaggggagcacattcccagatcccaagctaataccatcagaccaacccaagtgggt 187  Q
    |||||||||||||||| | |||||| | ||||| |||| || | |||||||| |||||||||||| |||||    
T  23465926 gaacctgagactttgaggaggagcatactcccaaatcctaaaccaataccattagaccaacccaaatgggt 23465996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 95 - 188
Target Start/End: Complemental strand, 42922508 - 42922414
Alignment:
Q  95 caaattggcaccgaggataattgaacctgagac-tttgaaggggagcacattcccagatcccaagctaataccatcagaccaacccaagtgggtt 188  Q
    ||||||||||||   || ||| ||||||||||| ||||| | |||||||| |||||| | |||||| |||||||  || ||||||||||||||||    
T  42922508 caaattggcaccagagagaatcgaacctgagacctttgaggaggagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 42922414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 95 - 188
Target Start/End: Complemental strand, 19244202 - 19244109
Alignment:
Q  95 caaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccatcagaccaacccaagtgggtt 188  Q
    ||||||||||||   || ||| ||||||||||| |||  | |||||||| || ||| |||||||  |||||||  |||||||||||||||||||    
T  19244202 caaattggcaccagagagaatcgaacctgagaccttggggaggagcacactctcaggtcccaagtcaataccagtagaccaacccaagtgggtt 19244109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 70 - 190
Target Start/End: Original strand, 34041546 - 34041666
Alignment:
Q  70 tttgaagaagctatattaacacacccaaattggcacc-gaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccat 168  Q
    ||||||||||||| | |||| | | |||||||||||| ||||  |||  |||||||||| |||| | |||||||| || ||||||| |||  |||||||     
T  34041546 tttgaagaagctaaactaaccccctcaaattggcaccagaggg-aatcaaacctgagaccttgaggaggagcacactctcagatcctaagtcaataccac 34041644  T
Q  169 cagaccaacccaagtgggttta 190  Q
     || ||||||||||||||||||    
T  34041645 taggccaacccaagtgggttta 34041666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 92 - 188
Target Start/End: Complemental strand, 28846787 - 28846691
Alignment:
Q  92 acccaaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccatcagaccaacccaagtgggtt 188  Q
    |||||||||| || ||  |||||| ||||||||||| | || | |||||||| |||||| |||||||  |||||||  ||| ||||| |||||||||    
T  28846787 acccaaattgacatcggtgataatcgaacctgagacatcgaggaggagcacactcccaggtcccaagtcaataccactagatcaacctaagtgggtt 28846691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 117 - 189
Target Start/End: Complemental strand, 39715063 - 39714991
Alignment:
Q  117 gaacctgagactttgaaggggagcacattcccagatcccaagctaataccatcagaccaacccaagtgggttt 189  Q
    ||||||||||| | || | |||||||| |||||| |||||||  ||||||| ||  |||||||||||||||||    
T  39715063 gaacctgagacctcgaggaggagcacactcccaggtcccaagtcaataccaccatgccaacccaagtgggttt 39714991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 69 - 129
Target Start/End: Complemental strand, 42223000 - 42222940
Alignment:
Q  69 ttttgaagaagctatattaacacacccaaattggcaccgaggataattgaacctgagactt 129  Q
    |||||||||| ||| |||||| ||||||||||| |||||| || ||| |||||| ||||||    
T  42223000 ttttgaagaatctaaattaacccacccaaattgacaccgaagagaatcgaacctaagactt 42222940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 53; Significance: 3e-21; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 69 - 189
Target Start/End: Original strand, 29692343 - 29692463
Alignment:
Q  69 ttttgaagaagctatattaacacacccaaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccat 168  Q
    |||||||||| ||| ||||   |||||||||||||| ||  || |||| ||||||||||||||| | |||||||| ||||||||||||| | |||||||     
T  29692343 ttttgaagaaactaaattagtccacccaaattggcatcggagagaattaaacctgagactttgaggaggagcacactcccagatcccaatccaataccac 29692442  T
Q  169 cagaccaacccaagtgggttt 189  Q
    ||||||||||||| |||||||    
T  29692443 cagaccaacccaaatgggttt 29692463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 91 - 191
Target Start/End: Original strand, 30883177 - 30883277
Alignment:
Q  91 cacccaaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccatcagaccaacccaagtgggttta 190  Q
    ||||||||||| ||| |  || |||||||| |||||| |||| | |||||||| |||||| |||||||| |||||||  |||||||||||||||||||||    
T  30883177 cacccaaattgacactggtgagaattgaacttgagaccttgaggaggagcacactcccaggtcccaagccaataccactagaccaacccaagtgggttta 30883276  T
Q  191 t 191  Q
    |    
T  30883277 t 30883277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 69 - 188
Target Start/End: Original strand, 8278232 - 8278351
Alignment:
Q  69 ttttgaagaagctatattaacacacccaaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccat 168  Q
    |||||||||||||| |||| | |||| |||| |||||||  ||||||  ||| |||||  | || | |||||||| |||||  |||||||| ||||||||    
T  8278232 ttttgaagaagctaaattagcccacctaaatcggcaccggagataatcaaacttgagatctcgaggaggagcacactcccaagtcccaagccaataccat 8278331  T
Q  169 cagaccaacccaagtgggtt 188  Q
    ||||||||||||||||||||    
T  8278332 cagaccaacccaagtgggtt 8278351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 69 - 188
Target Start/End: Complemental strand, 16457929 - 16457810
Alignment:
Q  69 ttttgaagaagctatattaacacacccaaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccat 168  Q
    |||||||||| ||| | || | ||| ||||||||||||| ||| |||||||| |||||| |||| | |||||||| ||| || |||||||| |||||||     
T  16457929 ttttgaagaacctaaactagcccacgcaaattggcaccggggagaattgaacatgagaccttgaggaggagcacactccaaggtcccaagccaataccac 16457830  T
Q  169 cagaccaacccaagtgggtt 188  Q
    ||| |||||| |||||||||    
T  16457829 caggccaacctaagtgggtt 16457810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 69 - 188
Target Start/End: Complemental strand, 16773926 - 16773807
Alignment:
Q  69 ttttgaagaagctatattaacacacccaaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccat 168  Q
    |||||||||||||| |||| | |||| ||||||||| |   || ||| ||||||||||| | || | |||||||| |||||| |||||||  |||||||     
T  16773926 ttttgaagaagctaaattagcccacctaaattggcatcagagagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagtcaataccac 16773827  T
Q  169 cagaccaacccaagtgggtt 188  Q
    ||||||||| ||||||||||    
T  16773826 cagaccaactcaagtgggtt 16773807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 69 - 159
Target Start/End: Complemental strand, 84943 - 84853
Alignment:
Q  69 ttttgaagaagctatattaacacacccaaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagc 159  Q
    |||||||||||||| |||| | |||||| | |||||||| ||| ||| |||| |||||| |||| | |||||||| |||||||||||||||    
T  84943 ttttgaagaagctaaattagcccacccataatggcaccggggagaatcgaacttgagaccttgaggaggagcacactcccagatcccaagc 84853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 69 - 191
Target Start/End: Original strand, 30109266 - 30109387
Alignment:
Q  69 ttttgaagaagctatattaacacacccaaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccat 168  Q
    |||||||||||||| |||| | |||| ||||| |||||| ||  ||| ||||||||||| |  | | |||||||| |||||| || ||||| |||||||     
T  30109266 ttttgaagaagctaaattagcccacctaaattagcaccggggg-aatcgaacctgagacctcaaggaggagcacactcccaggtcacaagccaataccac 30109364  T
Q  169 cagaccaacccaagtgggtttat 191  Q
    ||  |||||||||||||||||||    
T  30109365 caagccaacccaagtgggtttat 30109387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 95 - 189
Target Start/End: Complemental strand, 34984899 - 34984805
Alignment:
Q  95 caaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccatcagaccaacccaagtgggttt 189  Q
    ||||||||||||   || ||| |||||| |||| |||| | |||||||| |||||| | |||||| |||||||  ||||||||||||||||||||    
T  34984899 caaattggcaccagagagaatcgaacctaagaccttgaggaggagcacactcccaggttccaagccaataccactagaccaacccaagtgggttt 34984805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 71 - 188
Target Start/End: Complemental strand, 22661331 - 22661214
Alignment:
Q  71 ttgaagaagctatattaacacacccaaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccatca 170  Q
    |||||||||||| |||||| |||||||||| ||| ||  || ||||||||||||||  |||| | || | | | || |||||||||||  |||| |||||    
T  22661331 ttgaagaagctaaattaactcacccaaattagcatcggagaaaattgaacctgagatcttgaggtggggtatactctcagatcccaagtcaatatcatca 22661232  T
Q  171 gaccaacccaagtgggtt 188  Q
    | | ||||||||||||||    
T  22661231 ggctaacccaagtgggtt 22661214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 136 - 188
Target Start/End: Original strand, 14495829 - 14495881
Alignment:
Q  136 ggagcacattcccagatcccaagctaataccatcagaccaacccaagtgggtt 188  Q
    |||||||| ||||||||||||||  ||||||| ||||||||||||| ||||||    
T  14495829 ggagcacactcccagatcccaagtcaataccaccagaccaacccaaatgggtt 14495881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 69 - 188
Target Start/End: Complemental strand, 21589407 - 21589288
Alignment:
Q  69 ttttgaagaagctatattaacacacccaaattggcacc-gaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaatacca 167  Q
    |||||||||||||| | || | |||| ||||||||||| ||||  ||| ||||||||||| | || | | |||| | |||||| |||||||| |||||||    
T  21589407 ttttgaagaagctaaactagcccacctaaattggcaccagaggg-aatcgaacctgagacatcgaggagtagcagactcccaggtcccaagccaatacca 21589309  T
Q  168 tcagaccaacccaagtgggtt 188  Q
     ||| ||||||||||||||||    
T  21589308 ccaggccaacccaagtgggtt 21589288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 111 - 189
Target Start/End: Complemental strand, 5005825 - 5005749
Alignment:
Q  111 ataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccatcagaccaacccaagtgggttt 189  Q
    ||||||||||||||||| ||||  | || |||| ||| ||||| |||||||| |||||||||  |||||||||||||||    
T  5005825 ataattgaacctgagaccttga--gagaacacactccaagatctcaagctaacaccatcagattaacccaagtgggttt 5005749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 117 - 188
Target Start/End: Original strand, 21549142 - 21549213
Alignment:
Q  117 gaacctgagactttgaaggggagcacattcccagatcccaagctaataccatcagaccaacccaagtgggtt 188  Q
    |||| ||||||||| | | |||||||| |||||| |||||||| |||||||  || ||||||||||||||||    
T  21549142 gaacttgagactttaaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 21549213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 69 - 188
Target Start/End: Complemental strand, 29075900 - 29075781
Alignment:
Q  69 ttttgaagaagctatattaacacacccaaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccat 168  Q
    |||||||||||||| |||| | || | |||||||||||   || ||| |||| |||||  | || | |||||||| ||||||||||||||| |||||||     
T  29075900 ttttgaagaagctaaattagcccatctaaattggcaccagagagaatcgaacatgagatctcgaggaggagcacactcccagatcccaagccaataccac 29075801  T
Q  169 cagaccaacccaagtgggtt 188  Q
     || | ||||||||||||||    
T  29075800 taggcaaacccaagtgggtt 29075781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 101 - 188
Target Start/End: Original strand, 31669014 - 31669100
Alignment:
Q  101 ggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccatcagaccaacccaagtgggtt 188  Q
    ||||||| ||| ||| |||||| |||| |||| | |||||| | ||| || |||||||| || |||||||||||||||||||||||||    
T  31669014 ggcaccggggagaatcgaacctaagaccttga-gaggagcagactccaaggtcccaagccaacaccatcagaccaacccaagtgggtt 31669100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 118 - 191
Target Start/End: Original strand, 87429 - 87502
Alignment:
Q  118 aacctgagactttgaaggggagcacattcccagatcccaagctaataccatcagaccaacccaagtgggtttat 191  Q
    |||||||||| |||| | |||||||| |||||||| |||||  |||||||  || |||||| ||||||||||||    
T  87429 aacctgagaccttgaggaggagcacactcccagattccaaggcaataccactaggccaaccgaagtgggtttat 87502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 69 - 186
Target Start/End: Original strand, 18595958 - 18596075
Alignment:
Q  69 ttttgaagaagctatattaacacacccaaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccat 168  Q
    ||||||| |||||| | |||| | | ||||||||||||   || ||| |||||| |||| |||| | ||||||||||||||| || ||||| |||||||     
T  18595958 ttttgaataagctaaactaaccccctcaaattggcaccagagaaaatcgaacctaagaccttgaggaggagcacattcccaggtcacaagccaataccac 18596057  T
Q  169 cagaccaacccaagtggg 186  Q
     ||| ||| |||||||||    
T  18596058 tagatcaatccaagtggg 18596075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 136 - 189
Target Start/End: Original strand, 22020886 - 22020939
Alignment:
Q  136 ggagcacattcccagatcccaagctaataccatcagaccaacccaagtgggttt 189  Q
    |||||||| |||||||||||||||||||||||  |  |||||||||| ||||||    
T  22020886 ggagcacactcccagatcccaagctaataccactatgccaacccaagagggttt 22020939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 69 - 189
Target Start/End: Complemental strand, 22737201 - 22737081
Alignment:
Q  69 ttttgaagaagctatattaacacacccaaattggcacc-gaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaatacca 167  Q
    |||||||||||||| |||||| |||| ||||||  | | ||||  ||| ||||||||||| |||  | |||||||| | |||  |||||||| |||||||    
T  22737201 ttttgaagaagctaaattaacccacctaaattgatatcagaggg-aatcgaacctgagacattggggaggagcacacttccaagtcccaagccaatacca 22737103  T
Q  168 tcagaccaacccaagtgggttt 189  Q
      ||||||||||||||||||||    
T  22737102 ctagaccaacccaagtgggttt 22737081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 71 - 132
Target Start/End: Complemental strand, 35705103 - 35705042
Alignment:
Q  71 ttgaagaagctatattaacacacccaaattggcaccgaggataattgaacctgagactttga 132  Q
    |||||||||||| |||| | ||||||||||| ||||| ||| ||| ||||||||||| ||||    
T  35705103 ttgaagaagctaaattagcccacccaaattgacaccggggagaatcgaacctgagaccttga 35705042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 136 - 184
Target Start/End: Complemental strand, 12883892 - 12883844
Alignment:
Q  136 ggagcacattcccagatcccaagctaataccatcagaccaacccaagtg 184  Q
    |||||||| ||||||||||||| |||||||||||||  ||| |||||||    
T  12883892 ggagcacactcccagatcccaacctaataccatcaggtcaatccaagtg 12883844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 69 - 169
Target Start/End: Original strand, 17761312 - 17761412
Alignment:
Q  69 ttttgaagaagctatattaacacacccaaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccat 168  Q
    ||||||| |||||| |||||| || | ||||||||||||| || ||| || ||| | ||||  | | |||||||| |||||||||||||||  |||||||    
T  17761312 ttttgaaaaagctaaattaacccatctaaattggcaccgaagagaatcgatcctaaaacttcaaggaggagcacactcccagatcccaagccgataccat 17761411  T
Q  169 c 169  Q
    |    
T  17761412 c 17761412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 136 - 188
Target Start/End: Original strand, 41797836 - 41797888
Alignment:
Q  136 ggagcacattcccagatcccaagctaataccatcagaccaacccaagtgggtt 188  Q
    ||||||||||| |||||| ||||| ||||| || ||||||||| |||||||||    
T  41797836 ggagcacattctcagatctcaagccaatacaattagaccaaccaaagtgggtt 41797888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 52; Significance: 1e-20; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 69 - 188
Target Start/End: Complemental strand, 30127519 - 30127400
Alignment:
Q  69 ttttgaagaagctatattaacacacccaaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccat 168  Q
    |||||| ||||||| ||||||  ||| ||||||||||||   | ||| ||||||||||| | |||| |||||||| ||||||| ||||||| |||||||     
T  30127519 ttttgaggaagctaaattaacctacctaaattggcaccggaaagaatcgaacctgagacctcgaagaggagcacactcccagaccccaagccaataccac 30127420  T
Q  169 cagaccaacccaagtgggtt 188  Q
    ||||||||||||||||||||    
T  30127419 cagaccaacccaagtgggtt 30127400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 69 - 189
Target Start/End: Complemental strand, 33549223 - 33549103
Alignment:
Q  69 ttttgaagaagctatattaacacacccaaattggca-ccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaatacca 167  Q
    |||| ||||||||| |||| | |||| ||||||||| ||||| | ||| ||||||||||| | || | |||||||| |||||| |||||||| |||||||    
T  33549223 tttttaagaagctaaattagctcacctaaattggcatccgag-agaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaatacca 33549125  T
Q  168 tcagaccaacccaagtgggttt 189  Q
     |||||||||||||||||||||    
T  33549124 ccagaccaacccaagtgggttt 33549103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 69 - 190
Target Start/End: Original strand, 31622948 - 31623069
Alignment:
Q  69 ttttgaagaagctatattaacacacccaaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccat 168  Q
    |||||||||||||| |||| | ||||||||||| |||||  |  | |  |||||||||| | || | |||||||| |||||| |||||||| |||||||     
T  31622948 ttttgaagaagctaaattagcccacccaaattgacaccggagtgattcaaacctgagacctcgaggaggagcacactcccaggtcccaagccaataccac 31623047  T
Q  169 cagaccaacccaagtgggttta 190  Q
    | ||||||||||||||||||||    
T  31623048 cggaccaacccaagtgggttta 31623069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 70 - 188
Target Start/End: Complemental strand, 14558079 - 14557962
Alignment:
Q  70 tttgaagaagctatattaacacacccaaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccatc 169  Q
    ||||||||||||| ||||   ||||||||||| ||||| ||| ||| |||||||||||   || | |||||||| | |||| |||||||| || |||| |    
T  14558079 tttgaagaagctaaattagaccacccaaattgacaccg-ggagaatcgaacctgagacccggaggaggagcacacttccaggtcccaagccaacaccacc 14557981  T
Q  170 agaccaacccaagtgggtt 188  Q
    |||||||||||||||||||    
T  14557980 agaccaacccaagtgggtt 14557962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 69 - 188
Target Start/End: Original strand, 24333982 - 24334101
Alignment:
Q  69 ttttgaagaagctatattaacacacccaaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccat 168  Q
    |||| ||||||||| | || | |||||||||||||||||  || ||||||||||||||| |||| | |||||| | | | |  |||||||| || |||||    
T  24333982 tttttaagaagctaaactagcccacccaaattggcaccggtgagaattgaacctgagaccttgaggaggagcatactgcaatgtcccaagccaacaccat 24334081  T
Q  169 cagaccaacccaagtgggtt 188  Q
    | | ||||||||||||||||    
T  24334082 ccggccaacccaagtgggtt 24334101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 69 - 188
Target Start/End: Complemental strand, 21418589 - 21418470
Alignment:
Q  69 ttttgaagaagctatattaacacacccaaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccat 168  Q
    |||||||||||||| |||| | ||||  |||||||||   ||| ||| |||| |||||| | || | |||||||| |||||  |||||||| |||||||     
T  21418589 ttttgaagaagctaaattagcccaccttaattggcactagggagaatcgaacttgagacatggaggaggagcacactcccaagtcccaagccaataccac 21418490  T
Q  169 cagaccaacccaagtgggtt 188  Q
    ||| ||||||||| ||||||    
T  21418489 caggccaacccaactgggtt 21418470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 69 - 167
Target Start/End: Complemental strand, 6385981 - 6385883
Alignment:
Q  69 ttttgaagaagctatattaacacacccaaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaatacca 167  Q
    |||| ||||||||| |||| | |||||||||| ||||||  || ||| ||||||||||| || | | |||||||| |||||| |||||||  |||||||    
T  6385981 tttttaagaagctaaattagcccacccaaattagcaccggagagaatcgaacctgagaccttaaggaggagcacagtcccaggtcccaagtcaatacca 6385883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 71 - 189
Target Start/End: Original strand, 12188262 - 12188380
Alignment:
Q  71 ttgaagaagctatattaacacacccaaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccatca 170  Q
    |||||||||||| | |||| | | |||||||||||    || ||| |||| ||| || |||| | |||||||| |||||| |||||||| |||||||  |    
T  12188262 ttgaagaagctaaactaaccccctcaaattggcactagagagaatcgaacttgaaaccttgaggaggagcacactcccaggtcccaagccaataccacta 12188361  T
Q  171 gaccaacccaagtgggttt 189  Q
    | |||||||||||||||||    
T  12188362 ggccaacccaagtgggttt 12188380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 70 - 188
Target Start/End: Original strand, 24641148 - 24641266
Alignment:
Q  70 tttgaagaagctatattaacacacccaaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccatc 169  Q
    |||||||||| || |||| | |||| |||||||||  ||||| ||| |||||| | || | || | |||||||| ||||||||||||||  ||||||| |    
T  24641148 tttgaagaagttaaattagcccacctaaattggcagtgaggagaatcgaaccttaaacctcgaggaggagcacactcccagatcccaagtcaataccacc 24641247  T
Q  170 agaccaacccaagtgggtt 188  Q
    |  ||||||||| ||||||    
T  24641248 aagccaacccaaatgggtt 24641266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 117 - 190
Target Start/End: Original strand, 10338179 - 10338252
Alignment:
Q  117 gaacctgagactttgaaggggagcacattcccagatcccaagctaataccatcagaccaacccaagtgggttta 190  Q
    ||||||||||| |||| | |||||||| ||| || |||||||| ||||||| ||  |||||||||||| |||||    
T  10338179 gaacctgagaccttgaggaggagcacactcctaggtcccaagccaataccaccatgccaacccaagtgagttta 10338252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 117 - 190
Target Start/End: Original strand, 12234512 - 12234585
Alignment:
Q  117 gaacctgagactttgaaggggagcacattcccagatcccaagctaataccatcagaccaacccaagtgggttta 190  Q
    ||||||||||| | ||  ||||||||| |||||| |||||||  ||||||| ||| |||||| |||||||||||    
T  12234512 gaacctgagacctcgagagggagcacactcccaggtcccaagtcaataccaccaggccaacctaagtgggttta 12234585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 136 - 184
Target Start/End: Original strand, 6776631 - 6776679
Alignment:
Q  136 ggagcacattcccagatcccaagctaataccatcagaccaacccaagtg 184  Q
    ||||||||  |||||||||||||| ||||||| ||| ||||||||||||    
T  6776631 ggagcacacccccagatcccaagccaataccaccaggccaacccaagtg 6776679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 137 - 185
Target Start/End: Complemental strand, 13441101 - 13441053
Alignment:
Q  137 gagcacattcccagatcccaagctaataccatcagaccaacccaagtgg 185  Q
    ||||||| |||||| |||||||| ||||||| | |||||||||||||||    
T  13441101 gagcacactcccaggtcccaagccaataccacccgaccaacccaagtgg 13441053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 51; Significance: 5e-20; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 69 - 191
Target Start/End: Original strand, 17040969 - 17041091
Alignment:
Q  69 ttttgaagaagctatattaacacacccaaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccat 168  Q
    |||||||||||||| ||| || |||||||||||||||    || ||| ||||||||||| |||| | |||||||| | ||||||||||||| ||| |||     
T  17040969 ttttgaagaagctaaattgacccacccaaattggcacttgagagaatcgaacctgagaccttgaggaggagcacacttccagatcccaagccaatgccac 17041068  T
Q  169 cagaccaacccaagtgggtttat 191  Q
     ||||||||||||||||||||||    
T  17041069 tagaccaacccaagtgggtttat 17041091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 69 - 191
Target Start/End: Original strand, 11720917 - 11721039
Alignment:
Q  69 ttttgaagaagctatattaacacacccaaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccat 168  Q
    |||||||||||||| |||| | ||||||||||||||| | ||| ||| ||| |||| || || | | ||||||||||||||| |||||||| |||||||     
T  11720917 ttttgaagaagctaaattagcccacccaaattggcactggggagaatcgaatctgataccttaaggaggagcacattcccaggtcccaagccaataccac 11721016  T
Q  169 cagaccaacccaagtgggtttat 191  Q
    ||| |||||| |||| |||||||    
T  11721017 caggccaaccgaagttggtttat 11721039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 95 - 188
Target Start/End: Complemental strand, 22760956 - 22760863
Alignment:
Q  95 caaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccatcagaccaacccaagtgggtt 188  Q
    |||||||||| || ||| ||| ||||||||||| |||| | |||||||| |||||| |||||||  ||||||| ||||||||||||||||||||    
T  22760956 caaattggcatcggggagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagtcaataccaccagaccaacccaagtgggtt 22760863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 69 - 189
Target Start/End: Complemental strand, 2446427 - 2446307
Alignment:
Q  69 ttttgaagaagctatattaacacacccaaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccat 168  Q
    |||||||||||||| |||| | |||| |||| |||||||  || ||| |||| |||||  | || | |||||||| |||||  |||||||| ||||||||    
T  2446427 ttttgaagaagctaaattagcccacctaaatcggcaccggagagaatcgaacttgagatctcgaggaggagcacactcccaagtcccaagccaataccat 2446328  T
Q  169 cagaccaacccaagtgggttt 189  Q
    |||||||||||||||||||||    
T  2446327 cagaccaacccaagtgggttt 2446307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 69 - 188
Target Start/End: Complemental strand, 25590730 - 25590611
Alignment:
Q  69 ttttgaagaagctatattaacacacccaaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccat 168  Q
    |||||||||||||| |||| | ||| ||||||| |||||| || ||| ||||| ||||| | || | |||||||| ||||||||| ||||| |||||||     
T  25590730 ttttgaagaagctaaattagcccactcaaattgacaccgaagaaaatcgaacccgagacctcgaggaggagcacactcccagatctcaagccaataccaa 25590631  T
Q  169 cagaccaacccaagtgggtt 188  Q
    |||  |||||||||||||||    
T  25590630 caggtcaacccaagtgggtt 25590611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 120 - 186
Target Start/End: Complemental strand, 21854616 - 21854550
Alignment:
Q  120 cctgagactttgaaggggagcacattcccagatcccaagctaataccatcagaccaacccaagtggg 186  Q
    ||||||||||||| | |||||||| ||||||||||| ||| ||||||||||| ||||||||||||||    
T  21854616 cctgagactttgaggaggagcacactcccagatccctagccaataccatcaggccaacccaagtggg 21854550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 69 - 189
Target Start/End: Complemental strand, 41487478 - 41487361
Alignment:
Q  69 ttttgaagaagctatattaacacacccaaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccat 168  Q
    |||||||||||||| |||| | |||| |||||||||||| | | ||| ||||||||||| ||||   |||| ||| |||||  |||||||| |||||||     
T  41487478 ttttgaagaagctaaattagcccacctaaattggcaccgggaagaatcgaacctgagaccttga---ggagaacactcccaagtcccaagccaataccac 41487382  T
Q  169 cagaccaacccaagtgggttt 189  Q
    ||| |||||||||||||||||    
T  41487381 caggccaacccaagtgggttt 41487361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 69 - 189
Target Start/End: Complemental strand, 30579454 - 30579334
Alignment:
Q  69 ttttgaagaagctatattaacacacccaaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccat 168  Q
    |||||||||||||| |||| | |||| |||||||||||   || ||| ||||||||||| |||| | || | ||| |||||| || ||||| |||||||     
T  30579454 ttttgaagaagctaaattagcccacctaaattggcaccagagaaaatcgaacctgagaccttgaggaggtggacactcccaggtctcaagccaataccac 30579355  T
Q  169 cagaccaacccaagtgggttt 189  Q
    ||| |||||||||||||||||    
T  30579354 caggccaacccaagtgggttt 30579334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 69 - 188
Target Start/End: Original strand, 26459367 - 26459486
Alignment:
Q  69 ttttgaagaagctatattaacacacccaaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccat 168  Q
    |||||||||||||| | |||| |   ||||||||||||   || ||| ||||||||||| |||| | |||||||| |||||| |||||||| |||||||     
T  26459367 ttttgaagaagctaaactaaccccttcaaattggcaccagagagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagccaataccac 26459466  T
Q  169 cagaccaacccaagtgggtt 188  Q
     || ||||||||||||||||    
T  26459467 taggccaacccaagtgggtt 26459486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 69 - 188
Target Start/End: Complemental strand, 43591026 - 43590907
Alignment:
Q  69 ttttgaagaagctatattaacacacccaaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccat 168  Q
    |||||||||||||| |||| | ||||  |||||||||   ||| ||| ||||||||||| |||| | |||||||| |||||  |||||||| |||||||     
T  43591026 ttttgaagaagctaaattagcccaccttaattggcactagggagaatcgaacctgagacattgaggaggagcacactcccaagtcccaagccaataccac 43590927  T
Q  169 cagaccaacccaagtgggtt 188  Q
    ||| ||||||||| ||||||    
T  43590926 caggccaacccaactgggtt 43590907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 69 - 188
Target Start/End: Original strand, 48125132 - 48125250
Alignment:
Q  69 ttttgaagaagctatattaacacacccaaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccat 168  Q
    |||||||||||| | | || | |||| |||||||||||| ||| ||||||||||||||| ||   | |||||||| ||| || |||||||| || ||||     
T  48125132 ttttgaagaagccaaactagcccaccgaaattggcaccggggaaaattgaacctgagaccttcg-gaggagcacactccaaggtcccaagccaacaccac 48125230  T
Q  169 cagaccaacccaagtgggtt 188  Q
    ||||||||||||||||||||    
T  48125231 cagaccaacccaagtgggtt 48125250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 69 - 188
Target Start/End: Complemental strand, 48772057 - 48771938
Alignment:
Q  69 ttttgaagaagctatattaacacacccaaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccat 168  Q
    |||| ||||||||| |||| | |||| ||||||| ||   ||||||| ||||||||||| |  | | |||||||| ||||||||||||||| |||||||     
T  48772057 tttttaagaagctaaattagcccacctaaattggtacttgggataatcgaacctgagacctcaaggaggagcacactcccagatcccaagccaataccac 48771958  T
Q  169 cagaccaacccaagtgggtt 188  Q
    ||  ||||||||||||||||    
T  48771957 caagccaacccaagtgggtt 48771938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 68 - 188
Target Start/End: Original strand, 5579190 - 5579310
Alignment:
Q  68 cttttgaagaagctatattaacacacccaaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaatacca 167  Q
    ||||| ||||||| | |||| | ||||||||||||||||| ||| | |  |||||||||| |||| | |||||||| ||| || |||||||| || ||||    
T  5579190 ctttttaagaagcgaaattatcccacccaaattggcaccggggagagtcaaacctgagaccttgaggaggagcacactccaaggtcccaagccaacacca 5579289  T
Q  168 tcagaccaacccaagtgggtt 188  Q
     |||  |||||||||||||||    
T  5579290 ccaggtcaacccaagtgggtt 5579310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 96 - 188
Target Start/End: Complemental strand, 31835284 - 31835192
Alignment:
Q  96 aaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccatcagaccaacccaagtgggtt 188  Q
    |||||||||||  ||||||| ||||||||||| |||| | |||||||| ||| ||  ||||||| || |||| ||| ||||||||||||||||    
T  31835284 aaattggcaccagggataatcgaacctgagaccttgaggaggagcacactccaagcacccaagccaacaccaccaggccaacccaagtgggtt 31835192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 117 - 189
Target Start/End: Complemental strand, 43215255 - 43215183
Alignment:
Q  117 gaacctgagactttgaaggggagcacattcccagatcccaagctaataccatcagaccaacccaagtgggttt 189  Q
    ||||||||||| |||| | |||||||| ||| || |||||||| |||||||  ||||||||||||||||||||    
T  43215255 gaacctgagaccttgaggaggagcacactccgaggtcccaagccaataccactagaccaacccaagtgggttt 43215183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 69 - 189
Target Start/End: Original strand, 45709665 - 45709785
Alignment:
Q  69 ttttgaagaagctatattaacacacccaaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccat 168  Q
    |||| |||||||||  ||| | |||| ||||||| | ||  |||||| ||||||||||| | || | |||||||| || ||||||||||||||||||||     
T  45709665 ttttaaagaagctaagttagcccacctaaattggtatcggagataatcgaacctgagacctcgaggaggagcacactctcagatcccaagctaataccac 45709764  T
Q  169 cagaccaacccaagtgggttt 189  Q
     || ||||||||| |||||||    
T  45709765 taggccaacccaaatgggttt 45709785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 117 - 188
Target Start/End: Complemental strand, 7801251 - 7801180
Alignment:
Q  117 gaacctgagactttgaaggggagcacattcccagatcccaagctaataccatcagaccaacccaagtgggtt 188  Q
    ||||||||||| |||||| |||||||| |||||| |||||||  ||||||| ||| |||| |||||||||||    
T  7801251 gaacctgagaccttgaagaggagcacactcccaggtcccaagtcaataccaccaggccaaaccaagtgggtt 7801180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 69 - 152
Target Start/End: Original strand, 9183148 - 9183231
Alignment:
Q  69 ttttgaagaagctatattaacacacccaaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagat 152  Q
    |||||||||| ||| |||| | ||||||||||| ||||   |||||| |||||||||||||||| | |||||||| ||||||||    
T  9183148 ttttgaagaaactaaattagcccacccaaattgacaccagagataatcgaacctgagactttgaggaggagcacactcccagat 9183231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 122 - 188
Target Start/End: Original strand, 25021345 - 25021411
Alignment:
Q  122 tgagactttgaaggggagcacattcccagatcccaagctaataccatcagaccaacccaagtgggtt 188  Q
    ||||||||||| | |||||||| |||||| |||||||| |||||||  || ||||||||||||||||    
T  25021345 tgagactttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 25021411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 69 - 146
Target Start/End: Complemental strand, 21558247 - 21558170
Alignment:
Q  69 ttttgaagaagctatattaacacacccaaattggcaccgaggataattgaacctgagactttgaaggggagcacattc 146  Q
    |||||||||||||| |||||| |||| |||||||||||   || ||| ||||||||||| |||| | |||||||||||    
T  21558247 ttttgaagaagctaaattaacccacctaaattggcaccagagagaatcgaacctgagaccttgaggaggagcacattc 21558170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 69 - 186
Target Start/End: Original strand, 29385700 - 29385817
Alignment:
Q  69 ttttgaagaagctatattaacacacccaaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccat 168  Q
    |||||||||||| | | || | |||||||||||||||| | || |||  |||||||||| |||| | |||||||| ||| |  |||||||| || |||||    
T  29385700 ttttgaagaagcaaaagtagcccacccaaattggcaccaaagagaatcaaacctgagaccttgaggaggagcacactccaaagtcccaagccaacaccat 29385799  T
Q  169 cagaccaacccaagtggg 186  Q
    | | ||||||||||||||    
T  29385800 ccggccaacccaagtggg 29385817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 69 - 186
Target Start/End: Original strand, 44628141 - 44628257
Alignment:
Q  69 ttttgaagaagctatattaacacacccaaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccat 168  Q
    |||| ||||||||| |||| | |||| |||||| ||||||||  |||  ||| ||||||||||| | |||||||| ||| || ||||||||||| | ||     
T  44628141 tttttaagaagctaaattagcccaccaaaattgacaccgaggg-aatcaaacttgagactttgaggaggagcacactccaaggtcccaagctaacaacac 44628239  T
Q  169 cagaccaacccaagtggg 186  Q
    ||| ||||||||||||||    
T  44628240 caggccaacccaagtggg 44628257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 96 - 188
Target Start/End: Complemental strand, 27776264 - 27776172
Alignment:
Q  96 aaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccatcagaccaacccaagtgggtt 188  Q
    |||||||| | | ||| ||||||||||||||||| || | |||||||| || ||  ||||||||  |||||| ||| ||||||||||||||||    
T  27776264 aaattggcgctggggaaaattgaacctgagacttcgaggaggagcacactctcaagtcccaagcgtataccaccaggccaacccaagtgggtt 27776172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 69 - 164
Target Start/End: Original strand, 279911 - 280005
Alignment:
Q  69 ttttgaagaagctatattaacacacccaaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaata 164  Q
    |||| ||||||||| |||| | |||||||||||||||||  || ||||||||||||||| || | | |||| ||| ||||| ||||||||| ||||    
T  279911 tttttaagaagctaaattagcccacccaaattggcaccggagagaattgaacctgagaccttaaggaggagtacactccca-atcccaagccaata 280005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 69 - 188
Target Start/End: Original strand, 5273547 - 5273666
Alignment:
Q  69 ttttgaagaagctatattaacacacccaaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccat 168  Q
    |||| ||||||||| | || | |||||||||||||||||  || |||  ||||| |||| |||| | |||||||| ||  || |||||||| || ||||     
T  5273547 tttttaagaagctaaactagcccacccaaattggcaccggagacaatcaaacctaagaccttgaggaggagcacactctaaggtcccaagccaacaccac 5273646  T
Q  169 cagaccaacccaagtgggtt 188  Q
    ||| ||||||||||||||||    
T  5273647 caggccaacccaagtgggtt 5273666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 69 - 188
Target Start/End: Complemental strand, 15137672 - 15137553
Alignment:
Q  69 ttttgaagaagctatattaacacacccaaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccat 168  Q
    |||||||||| ||| |||| | ||||||||||| ||||   || |||  |||||||||| |||| | |||||||| ||| | ||||||||  | |||||     
T  15137672 ttttgaagaaactaaattagcccacccaaattgacaccagagagaatctaacctgagaccttgaggaggagcacactcctaaatcccaagtcagtaccac 15137573  T
Q  169 cagaccaacccaagtgggtt 188  Q
    ||| ||||||||||||||||    
T  15137572 caggccaacccaagtgggtt 15137553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 110 - 185
Target Start/End: Original strand, 20952147 - 20952222
Alignment:
Q  110 gataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccatcagaccaacccaagtgg 185  Q
    |||||| ||| |||||| ||||| | |||||||| |||||| |||||| | |||||||||||  ||||||||||||    
T  20952147 gataatcgaatctgagattttgaggaggagcacactcccaggtcccaaaccaataccatcaggtcaacccaagtgg 20952222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 69 - 188
Target Start/End: Complemental strand, 39631963 - 39631844
Alignment:
Q  69 ttttgaagaagctatattaacacacccaaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccat 168  Q
    |||||||||||||| | |||| | | |||||||||||    || ||| ||||||||||| |||| | |||||  | |||||| |||||||| |||||||     
T  39631963 ttttgaagaagctaaactaaccccctcaaattggcacaagagagaatcgaacctgagaccttgaggaggagcttactcccaggtcccaagccaataccac 39631864  T
Q  169 cagaccaacccaagtgggtt 188  Q
     || ||||||||||||||||    
T  39631863 taggccaacccaagtgggtt 39631844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 91 - 189
Target Start/End: Original strand, 18056754 - 18056852
Alignment:
Q  91 cacccaaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccatcagaccaacccaagtgggttt 189  Q
    |||||||||| |||||| ||| ||| ||||||||||| || | | |||||||| ||| |   ||||||  ||||||| ||||| |||||||||||||||    
T  18056754 cacccaaattagcaccggggagaatcgaacctgagaccttcaggaggagcacactccgaagacccaagtcaataccaccagactaacccaagtgggttt 18056852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 91 - 189
Target Start/End: Original strand, 38374578 - 38374676
Alignment:
Q  91 cacccaaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccatcagaccaacccaagtgggttt 189  Q
    |||| |||||||||||| ||| ||| |||||| |||| |||| | |||||||| ||  || |||||||| || |||| ||  |||||||||||||||||    
T  38374578 cacctaaattggcaccggggagaatcgaacctaagaccttgaggaggagcacactctaaggtcccaagccaacaccaccacgccaacccaagtgggttt 38374676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 71 - 188
Target Start/End: Original strand, 20335790 - 20335907
Alignment:
Q  71 ttgaagaagctatattaacacacccaaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccatca 170  Q
    ||||||||| || |||| | || |||||||| || ||  || ||| ||||||||||| | || | |||||||| |||||  |||||||| ||||||   |    
T  20335790 ttgaagaagttaaattagcccatccaaattgacatcggtgagaatcgaacctgagacctcgaggaggagcacactcccaagtcccaagccaatacctcta 20335889  T
Q  171 gaccaacccaagtgggtt 188  Q
    ||||||||||||||||||    
T  20335890 gaccaacccaagtgggtt 20335907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 136 - 188
Target Start/End: Complemental strand, 4161340 - 4161288
Alignment:
Q  136 ggagcacattcccagatcccaagctaataccatcagaccaacccaagtgggtt 188  Q
    |||||||| | | ||||||||||| ||||||| ||||||||||||| ||||||    
T  4161340 ggagcacacttcaagatcccaagccaataccaccagaccaacccaaatgggtt 4161288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 70 - 189
Target Start/End: Original strand, 33460380 - 33460500
Alignment:
Q  70 tttgaagaagctatattaacacacccaaattggcaccgaggataattgaacctgagactttgaagg-ggagcacattcccagatcccaagctaataccat 168  Q
    ||||||||||||| | || | |||  |||||| ||||| ||| ||| ||| ||||||| ||||||| ||| |||| ||| || |||||| | |||||||     
T  33460380 tttgaagaagctaaactagcccacataaattgacaccggggagaatcgaatctgagaccttgaaggaggaccacactcctaggtcccaaaccaataccac 33460479  T
Q  169 cagaccaacccaagtgggttt 189  Q
    || ||||||||| ||||||||    
T  33460480 caaaccaacccaggtgggttt 33460500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 49; Significance: 8e-19; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 69 - 189
Target Start/End: Original strand, 51250479 - 51250599
Alignment:
Q  69 ttttgaagaagctatattaacacacccaaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccat 168  Q
    |||| ||||||||| |||| | |||||||||||||||||  |  ||| |||| |||||  |||| | |||||||| ||||||||||||||| |||||||     
T  51250479 tttttaagaagctaaattagcccacccaaattggcaccggagggaatcgaacttgagatcttgaggcggagcacactcccagatcccaagccaataccac 51250578  T
Q  169 cagaccaacccaagtgggttt 189  Q
    ||| |||||||||||||||||    
T  51250579 caggccaacccaagtgggttt 51250599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 77 - 188
Target Start/End: Complemental strand, 39509181 - 39509070
Alignment:
Q  77 aagctatattaacacacccaaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccatcagaccaa 176  Q
    |||||| |||||| |||| |||||| ||| | ||| ||| ||||||||||| | || | |||||||| ||||||||||||||| | |||||| |||||||    
T  39509181 aagctaaattaacccacctaaattgccactggggagaatcgaacctgagacctcgaggaggagcacactcccagatcccaagccattaccatgagaccaa 39509082  T
Q  177 cccaagtgggtt 188  Q
    ||||||||||||    
T  39509081 cccaagtgggtt 39509070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 77 - 188
Target Start/End: Original strand, 55427165 - 55427276
Alignment:
Q  77 aagctatattaacacacccaaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccatcagaccaa 176  Q
    |||||| |||| | ||||||||||||||||| ||| ||| ||||||||||| | ||   |||||| | |||||| |||||||| ||||||| ||| ||||    
T  55427165 aagctaaattagcccacccaaattggcaccgcggagaatcgaacctgagacctcgagcaggagcagactcccaggtcccaagccaataccaccaggccaa 55427264  T
Q  177 cccaagtgggtt 188  Q
    ||||||||||||    
T  55427265 cccaagtgggtt 55427276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 69 - 185
Target Start/End: Original strand, 7292755 - 7292871
Alignment:
Q  69 ttttgaagaagctatattaacacacccaaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccat 168  Q
    |||||||||||||| | |||| | | |||||||||||    || ||| |||||||||||||||| | |||||||| |||||| | |||||| |||||||     
T  7292755 ttttgaagaagctaaactaaccccctcaaattggcactagagagaatcgaacctgagactttgaggaggagcacactcccaggttccaagccaataccac 7292854  T
Q  169 cagaccaacccaagtgg 185  Q
     ||||||||||||||||    
T  7292855 tagaccaacccaagtgg 7292871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 77 - 188
Target Start/End: Original strand, 19238542 - 19238653
Alignment:
Q  77 aagctatattaacacacccaaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccatcagaccaa 176  Q
    |||||| |||| | |||||||||||| |||| ||| ||| ||||| ||||| | || | |||||||| |||||  |||||||| ||||||| ||| ||||    
T  19238542 aagctaaattagcccacccaaattggtaccggggagaatcgaacccgagacctcgaggaggagcacactcccaagtcccaagccaataccaccaggccaa 19238641  T
Q  177 cccaagtgggtt 188  Q
    ||||||||||||    
T  19238642 cccaagtgggtt 19238653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 69 - 188
Target Start/End: Original strand, 37109308 - 37109427
Alignment:
Q  69 ttttgaagaagctatattaacacacccaaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccat 168  Q
    |||||||||| ||| | |||| | | ||||||||||||   || ||| ||||||||||| |||| | |||||||| |||||| |||||||| |||||||     
T  37109308 ttttgaagaaactaaactaaccccctcaaattggcaccagagagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagccaataccac 37109407  T
Q  169 cagaccaacccaagtgggtt 188  Q
     || ||||||||||||||||    
T  37109408 taggccaacccaagtgggtt 37109427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 74 - 188
Target Start/End: Complemental strand, 46295211 - 46295097
Alignment:
Q  74 aagaagctatattaacacacccaaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccatcagac 173  Q
    ||||||||| | || | ||||||||||||||||| ||| ||| ||||||||||| |||| | |||||||| ||| |  |||||||| || || | |||||    
T  46295211 aagaagctaaactagcccacccaaattggcaccggggagaatcgaacctgagaccttgaggaggagcacactccaatgtcccaagccaacactaccagac 46295112  T
Q  174 caacccaagtgggtt 188  Q
    ||||| |||||||||    
T  46295111 caacctaagtgggtt 46295097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 69 - 188
Target Start/End: Complemental strand, 28635815 - 28635696
Alignment:
Q  69 ttttgaagaagctatattaacacacccaaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccat 168  Q
    |||||||||||||| |||| | ||||||||||||||||   || ||| |||||| |||| |  | | |||||||| ||||||||||||||  | |||||     
T  28635815 ttttgaagaagctaaattagcccacccaaattggcaccagagagaatcgaacctaagacctccaggaggagcacactcccagatcccaagtcagtaccac 28635716  T
Q  169 cagaccaacccaagtgggtt 188  Q
    |||  |||||||||||||||    
T  28635715 caggacaacccaagtgggtt 28635696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 71 - 167
Target Start/End: Complemental strand, 38869885 - 38869789
Alignment:
Q  71 ttgaagaagctatattaacacacccaaattggcacc-gaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaatacca 167  Q
    |||||||||||| | |||| | | |||||||||||| ||||  ||| ||||||||||| |||| | |||||||| ||||||||||||||| |||||||    
T  38869885 ttgaagaagctaaactaaccccctcaaattggcaccagaggg-aatcgaacctgagaccttgaggaggagcacactcccagatcccaagccaatacca 38869789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 69 - 189
Target Start/End: Original strand, 7949411 - 7949531
Alignment:
Q  69 ttttgaagaagctatattaacacacccaaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccat 168  Q
    |||||||||||||| |||| | |||| |||||| ||||   || ||| ||||||||||| |||| | |||||||| ||| || |||||||| ||||||      
T  7949411 ttttgaagaagctaaattagcccacctaaattgacaccagagagaatcgaacctgagaccttgaggaggagcacactccgaggtcccaagccaataccgc 7949510  T
Q  169 cagaccaacccaagtgggttt 189  Q
     || ||| |||||||||||||    
T  7949511 taggccagcccaagtgggttt 7949531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 136 - 188
Target Start/End: Original strand, 9241049 - 9241101
Alignment:
Q  136 ggagcacattcccagatcccaagctaataccatcagaccaacccaagtgggtt 188  Q
    |||||||| | ||||||||||||| ||||||| ||| ||||||||||||||||    
T  9241049 ggagcacactaccagatcccaagccaataccaccaggccaacccaagtgggtt 9241101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 117 - 185
Target Start/End: Original strand, 41346968 - 41347036
Alignment:
Q  117 gaacctgagactttgaaggggagcacattcccagatcccaagctaataccatcagaccaacccaagtgg 185  Q
    ||||||||||||| || | |||||| | ||||||||| ||| | ||||||||||| |||||||||||||    
T  41346968 gaacctgagacttcgaggaggagcatactcccagatctcaaaccaataccatcaggccaacccaagtgg 41347036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 113 - 181
Target Start/End: Complemental strand, 43728470 - 43728402
Alignment:
Q  113 aattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccatcagaccaacccaa 181  Q
    |||||||||||||||||||| | |||||||| |||||||||  |||  ||||||| || ||||||||||    
T  43728470 aattgaacctgagactttgaggaggagcacactcccagatcataagtcaataccaccataccaacccaa 43728402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 121 - 188
Target Start/End: Original strand, 1730498 - 1730565
Alignment:
Q  121 ctgagactttgaaggggagcacattcccagatcccaagctaataccatcagaccaacccaagtgggtt 188  Q
    |||||||||||||| |||||||| || ||| |||||||| |||||||  ||  |||||||||||||||    
T  1730498 ctgagactttgaagaggagcacactctcaggtcccaagccaataccactaggtcaacccaagtgggtt 1730565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 69 - 192
Target Start/End: Original strand, 18404840 - 18404963
Alignment:
Q  69 ttttgaagaagctatattaacacacccaaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccat 168  Q
    |||| ||||||||| | |||| |||  |||||| ||||   |||||| ||||||||||| |||| | |||| | ||||||| ||||||||  |||||||     
T  18404840 tttttaagaagctaaactaacccacttaaattgacaccttagataatcgaacctgagacattgatgaggagtatattcccaaatcccaagtcaataccac 18404939  T
Q  169 cagaccaacccaagtgggtttatg 192  Q
     | |||||||||| ||||||||||    
T  18404940 taaaccaacccaaatgggtttatg 18404963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 91 - 190
Target Start/End: Complemental strand, 21344913 - 21344815
Alignment:
Q  91 cacccaaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccatcagaccaacccaagtgggttta 190  Q
    |||| |||||| ||| | ||| |||||||| |||||| |||| | |||||||| ||| || |||||||| || | |||||| ||||||||||||||||||    
T  21344913 cacctaaattgacactggggagaattgaacatgagaccttga-gaggagcacactccaaggtcccaagccaacatcatcaggccaacccaagtgggttta 21344815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 70 - 189
Target Start/End: Original strand, 37720172 - 37720291
Alignment:
Q  70 tttgaagaagctatattaacacacccaaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccatc 169  Q
    ||||||||||||| |||| | |||| ||||||   ||  ||| ||| ||||||| ||| |||| | || ||||| |||||| |||||||| |||| || |    
T  37720172 tttgaagaagctaaattagcccacctaaattgatccctgggagaatcgaacctgggaccttgaggaggggcacactcccaggtcccaagccaataacacc 37720271  T
Q  170 agaccaacccaagtgggttt 189  Q
    || |||||||||||||||||    
T  37720272 aggccaacccaagtgggttt 37720291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 152 - 190
Target Start/End: Complemental strand, 6606094 - 6606056
Alignment:
Q  152 tcccaagctaataccatcagaccaacccaagtgggttta 190  Q
    |||||||| || |||||||||||||||||||||||||||    
T  6606094 tcccaagccaacaccatcagaccaacccaagtgggttta 6606056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 69 - 167
Target Start/End: Complemental strand, 16581812 - 16581714
Alignment:
Q  69 ttttgaagaagctatattaacacacccaaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaatacca 167  Q
    |||||||||||||| | |||| | | ||||||||||||   |||||| ||||||||||| |||| | |||||| | |||||| | |||||| |||||||    
T  16581812 ttttgaagaagctaaactaaccctctcaaattggcaccagagataatagaacctgagaccttgaggaggagcagactcccaggttccaagccaatacca 16581714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 137 - 191
Target Start/End: Original strand, 21660169 - 21660223
Alignment:
Q  137 gagcacattcccagatcccaagctaataccatcagaccaacccaagtgggtttat 191  Q
    ||||||| ||||||||| ||||  ||||||| ||||||||||||||| |||||||    
T  21660169 gagcacactcccagatctcaagtcaataccaccagaccaacccaagttggtttat 21660223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 137 - 191
Target Start/End: Original strand, 21668933 - 21668987
Alignment:
Q  137 gagcacattcccagatcccaagctaataccatcagaccaacccaagtgggtttat 191  Q
    ||||||| ||||||||| ||||  ||||||| ||||||||||||||| |||||||    
T  21668933 gagcacactcccagatctcaagtcaataccaccagaccaacccaagttggtttat 21668987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 139 - 189
Target Start/End: Original strand, 27965537 - 27965587
Alignment:
Q  139 gcacattcccagatcccaagctaataccatcagaccaacccaagtgggttt 189  Q
    ||||| ||||||||||||||| |||||||  || |||||||||||||||||    
T  27965537 gcacactcccagatcccaagccaataccactaggccaacccaagtgggttt 27965587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 69 - 167
Target Start/End: Original strand, 30938176 - 30938274
Alignment:
Q  69 ttttgaagaagctatattaacacacccaaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaatacca 167  Q
    |||||||||||||| | |||| |||| |||||||||  | ||| ||| ||||||||||| | || | |||||||| ||| ||||||||| | |||||||    
T  30938176 ttttgaagaagctaaactaacccacctaaattggcattggggagaatcgaacctgagacctcgaggaggagcacactccaagatcccaaaccaatacca 30938274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 69 - 159
Target Start/End: Complemental strand, 46329283 - 46329193
Alignment:
Q  69 ttttgaagaagctatattaacacacccaaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagc 159  Q
    |||||||||| ||| |||| |  |||||||||||||||| | | ||| |||||||| || |||| | |||||||| |||||| ||||||||    
T  46329283 ttttgaagaaactaaattagcttacccaaattggcaccgggaagaatcgaacctgataccttgaggaggagcacactcccaggtcccaagc 46329193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 69 - 193
Target Start/End: Original strand, 2184989 - 2185114
Alignment:
Q  69 ttttgaagaagctatattaacacacccaaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccat 168  Q
    |||| ||||||||| | |||| | | |||||||||| ||  || ||| ||||||||||||||||   |||||||| |||||| | |||||| | |||||     
T  2184989 tttttaagaagctaaactaaccccctcaaattggcatcggagagaatcgaacctgagactttgagaaggagcacactcccaggttccaagccattaccac 2185088  T
Q  169 cagaccaaccc-aagtgggtttatgt 193  Q
     || ||||||| ||||||||||||||    
T  2185089 taggccaacccgaagtgggtttatgt 2185114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 91 - 188
Target Start/End: Original strand, 5795388 - 5795485
Alignment:
Q  91 cacccaaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccatcagaccaacccaagtgggtt 188  Q
    ||||||||||||||| | ||| |||  |||||||||| |||| | |||||| | ||| || | |||||  || |||| ||||||||||||||||||||    
T  5795388 cacccaaattggcactggggagaatcaaacctgagaccttgaggaggagcatactccaaggtgccaagtcaacaccaccagaccaacccaagtgggtt 5795485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 69 - 186
Target Start/End: Original strand, 40283943 - 40284060
Alignment:
Q  69 ttttgaagaagctatattaacacacccaaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccat 168  Q
    ||||||||||| || |||| | |||| ||||||||||| || | |||  ||||| |||| |||| | |  ||||| |||||  |||||||| ||||||||    
T  40283943 ttttgaagaagttaaattagcccacctaaattggcaccaagcagaatcaaaccttagaccttgaggagatgcacactcccaagtcccaagccaataccat 40284042  T
Q  169 cagaccaacccaagtggg 186  Q
    ||  ||||||||||||||    
T  40284043 catgccaacccaagtggg 40284060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 137 - 185
Target Start/End: Original strand, 3350480 - 3350528
Alignment:
Q  137 gagcacattcccagatcccaagctaataccatcagaccaacccaagtgg 185  Q
    ||||||||||||| ||| ||||  ||||||||||||||||| |||||||    
T  3350480 gagcacattcccaaatctcaagtcaataccatcagaccaactcaagtgg 3350528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 152 - 184
Target Start/End: Original strand, 4911272 - 4911304
Alignment:
Q  152 tcccaagctaataccatcagaccaacccaagtg 184  Q
    |||||||||||||||| ||||||||||||||||    
T  4911272 tcccaagctaataccaccagaccaacccaagtg 4911304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 140 - 188
Target Start/End: Complemental strand, 20608970 - 20608922
Alignment:
Q  140 cacattcccagatcccaagctaataccatcagaccaacccaagtgggtt 188  Q
    |||| |||| |||| ||||| |||||||||||| |||||||||||||||    
T  20608970 cacactcccggatctcaagccaataccatcagatcaacccaagtgggtt 20608922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 69 - 189
Target Start/End: Original strand, 25414172 - 25414291
Alignment:
Q  69 ttttgaagaagctatattaacacacccaaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccat 168  Q
    |||| ||||||| | | |||| |||| |||||||||||| ||| |||  |||||||||||||| || |||||||| ||| || || ||||| || ||||     
T  25414172 tttttaagaagccaaactaacccaccaaaattggcaccggggagaatcaaacctgagactttg-agaggagcacactccaaggtctcaagccaacaccag 25414270  T
Q  169 cagaccaacccaagtgggttt 189  Q
     || ||||||||||| |||||    
T  25414271 aaggccaacccaagttggttt 25414291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 70 - 188
Target Start/End: Original strand, 15281 - 15399
Alignment:
Q  70 tttgaagaagctatattaacacacccaaattggca-ccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccat 168  Q
    ||||||||||||| |||| | |||| ||||||||| ||||| | ||| ||||||||||| | || | |||||||| |||||| |||||||| |||||||     
T  15281 tttgaagaagctaaattagcccacctaaattggcatccgag-agaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaataccac 15379  T
Q  169 cagaccaacccaagtgggtt 188  Q
    ||||||||||||||||||||    
T  15380 cagaccaacccaagtgggtt 15399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 47; Significance: 1e-17; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 95 - 189
Target Start/End: Original strand, 15048044 - 15048138
Alignment:
Q  95 caaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccatcagaccaacccaagtgggttt 189  Q
    ||||||||||||   |||||| ||||||||||| |||| | ||||||||||||||||||||||||  ||||||| |  |||||||||||||||||    
T  15048044 caaattggcaccagagataatcgaacctgagaccttgaggaggagcacattcccagatcccaagcctataccattaagccaacccaagtgggttt 15048138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 72 - 189
Target Start/End: Original strand, 44743815 - 44743926
Alignment:
Q  72 tgaagaagctatattaacacacccaaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccatcag 171  Q
    ||||||||||| |||||| ||||||||||||||| |  |||||| ||||||||||| | || | |||||||| ||||||||||||||      ||| |||    
T  44743815 tgaagaagctaaattaacccacccaaattggcactggagataatcgaacctgagacctcgaggaggagcacactcccagatcccaag------ccaccag 44743908  T
Q  172 accaacccaagtgggttt 189  Q
    ||||||||||||||||||    
T  44743909 accaacccaagtgggttt 44743926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 95 - 188
Target Start/End: Original strand, 28703387 - 28703480
Alignment:
Q  95 caaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccatcagaccaacccaagtgggtt 188  Q
    ||||||||||||   || ||| ||||||||||| |||||| |||||||| |||||||||||||||||||| ||   ||||||||||||||||||    
T  28703387 caaattggcaccagagagaatcgaacctgagaccttgaagaggagcacactcccagatcccaagctaatatcactggaccaacccaagtgggtt 28703480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 69 - 190
Target Start/End: Complemental strand, 30311425 - 30311304
Alignment:
Q  69 ttttgaagaagctatattaacacacccaaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccat 168  Q
    |||||||||||||| | |||| | | |||||||||||| | || ||| ||||||||||| |||| | |||||||| |||||||||||||||  ||||||     
T  30311425 ttttgaagaagctaaactaaccccctcaaattggcaccaaagagaatcgaacctgagaccttgaggaggagcacactcccagatcccaagcctataccac 30311326  T
Q  169 cagaccaacccaagtgggttta 190  Q
     || |||||||| |||||||||    
T  30311325 taggccaacccaggtgggttta 30311304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 73 - 181
Target Start/End: Original strand, 4844472 - 4844580
Alignment:
Q  73 gaagaagctatattaacacacccaaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccatcaga 172  Q
    |||||||||| |||| | ||| |||||||||||||  || ||| || |||||||| | || | |||||||| ||||||||||||||  ||||||| ||||    
T  4844472 gaagaagctaaattagcccacacaaattggcaccggagagaatcgatcctgagacctcgaggaggagcacactcccagatcccaagtcaataccaccaga 4844571  T
Q  173 ccaacccaa 181  Q
    |||||||||    
T  4844572 ccaacccaa 4844580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 73 - 181
Target Start/End: Original strand, 4870168 - 4870276
Alignment:
Q  73 gaagaagctatattaacacacccaaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccatcaga 172  Q
    |||||||||| |||| | ||| |||||||||||||  || ||| || |||||||| | || | |||||||| ||||||||||||||  ||||||| ||||    
T  4870168 gaagaagctaaattagcccacacaaattggcaccggagagaatcgatcctgagacctcgaggaggagcacactcccagatcccaagtcaataccaccaga 4870267  T
Q  173 ccaacccaa 181  Q
    |||||||||    
T  4870268 ccaacccaa 4870276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 69 - 189
Target Start/End: Original strand, 10499066 - 10499186
Alignment:
Q  69 ttttgaagaagctatattaacacacccaaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccat 168  Q
    |||||||||||||| |||| | ||||||||||| || ||  || ||| ||||||||||| |  | |  ||||| | ||||||||||||||| |||||||     
T  10499066 ttttgaagaagctaaattagcccacccaaattgacatcggagagaatcgaacctgagacctcaaggaagagcagactcccagatcccaagccaataccac 10499165  T
Q  169 cagaccaacccaagtgggttt 189  Q
    ||| |||||||||||||||||    
T  10499166 caggccaacccaagtgggttt 10499186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 95 - 158
Target Start/End: Original strand, 8501556 - 8501619
Alignment:
Q  95 caaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaag 158  Q
    ||||||||||||||||| |||||||||||| ||||||| | |||||||| ||||||||| ||||    
T  8501556 caaattggcaccgaggagaattgaacctgaaactttgaggaggagcacactcccagatctcaag 8501619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 69 - 188
Target Start/End: Complemental strand, 14339729 - 14339610
Alignment:
Q  69 ttttgaagaagctatattaacacacccaaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccat 168  Q
    |||||||||||||| |||| | ||||  |||||||||   ||| ||| ||||||||||| |||| | |||||||| ||||| ||||||||| |||||||     
T  14339729 ttttgaagaagctaaattagcccaccttaattggcactagggagaatcgaacctgagacattgaggaggagcacactcccaaatcccaagccaataccac 14339630  T
Q  169 cagaccaacccaagtgggtt 188  Q
    ||| |||| |||| ||||||    
T  14339629 caggccaatccaactgggtt 14339610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 69 - 188
Target Start/End: Original strand, 51903835 - 51903954
Alignment:
Q  69 ttttgaagaagctatattaacacacccaaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccat 168  Q
    |||||||||||||| |||| | ||| ||||||| |||||  || ||| |||||||||||   || | |||||||| ||||||||||||||| |||||||     
T  51903835 ttttgaagaagctaaattagcccactcaaattgacaccggagagaatcgaacctgagaccacgaggaggagcacactcccagatcccaagccaataccaa 51903934  T
Q  169 cagaccaacccaagtgggtt 188  Q
    |||  ||||||| |||||||    
T  51903935 caggtcaacccaggtgggtt 51903954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 69 - 191
Target Start/End: Complemental strand, 30232449 - 30232327
Alignment:
Q  69 ttttgaagaagctatattaacacacccaaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccat 168  Q
    |||||||| ||||| |||| | || ||||||||||||||  || ||| |||||||||||  ||| | |||||||| | ||||||| ||| | |||||||     
T  30232449 ttttgaagtagctaaattagcccaaccaaattggcaccggagagaatggaacctgagaccatgaggaggagcacagttccagatcgcaaaccaataccac 30232350  T
Q  169 cagaccaacccaagtgggtttat 191  Q
    |||  ||||||||||||||||||    
T  30232349 cagggcaacccaagtgggtttat 30232327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 136 - 190
Target Start/End: Complemental strand, 36720433 - 36720379
Alignment:
Q  136 ggagcacattcccagatcccaagctaataccatcagaccaacccaagtgggttta 190  Q
    |||||||| ||||| ||||||||| ||||||| ||||||||||||||||||||||    
T  36720433 ggagcacactcccatatcccaagccaataccaccagaccaacccaagtgggttta 36720379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 69 - 187
Target Start/End: Original strand, 47454574 - 47454692
Alignment:
Q  69 ttttgaagaagctatattaacacacccaaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccat 168  Q
    |||||||||||||| | |||| |||| |||||||||  | ||| ||| ||||||||||| | || | |||||||| ||| ||||| ||||| |||||||     
T  47454574 ttttgaagaagctaaactaacccacctaaattggcattggggagaatcgaacctgagacctcgaggaggagcacactccaagatctcaagccaataccac 47454673  T
Q  169 cagaccaacccaagtgggt 187  Q
     ||| ||||||||||||||    
T  47454674 tagaacaacccaagtgggt 47454692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 69 - 189
Target Start/End: Complemental strand, 40268607 - 40268488
Alignment:
Q  69 ttttgaagaagctatattaacacacccaaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccat 168  Q
    |||||||||||||| | |||| |||| ||||||||| || ||| ||| ||||||||||| || ||| ||||| || ||| || |||||||| || ||||     
T  40268607 ttttgaagaagctaaactaacccaccgaaattggcatcggggagaatcgaacctgagacctt-aagaggagcccactccaaggtcccaagccaacaccac 40268509  T
Q  169 cagaccaacccaagtgggttt 189  Q
    ||| | |||||||||||||||    
T  40268508 caggcaaacccaagtgggttt 40268488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 117 - 188
Target Start/End: Complemental strand, 4222212 - 4222141
Alignment:
Q  117 gaacctgagactttgaaggggagcacattcccagatcccaagctaataccatcagaccaacccaagtgggtt 188  Q
    |||||| ||||||||| | |||||||| ||||||||||||||| |||||||  |  ||||||||||||||||    
T  4222212 gaacctaagactttgaggaggagcacactcccagatcccaagccaataccactaagccaacccaagtgggtt 4222141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 95 - 185
Target Start/End: Complemental strand, 53413038 - 53412948
Alignment:
Q  95 caaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccatcagaccaacccaagtgg 185  Q
    ||||||||||||   || ||||||||||||||| |||| | |||||||| |||||| |  ||||| |||||||  ||||||||||||||||    
T  53413038 caaattggcaccagagagaattgaacctgagaccttgaggaggagcacactcccaggttacaagccaataccactagaccaacccaagtgg 53412948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 96 - 189
Target Start/End: Original strand, 5499391 - 5499484
Alignment:
Q  96 aaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccatcagaccaacccaagtgggttt 189  Q
    |||||||||||| ||| ||| |||||| |||| || | | |||||||| || |||||| ||||  ||||||| ||| |||||||||||||||||    
T  5499391 aaattggcaccggggagaatagaaccttagaccttaaggaggagcacactctcagatctcaagtcaataccaccaggccaacccaagtgggttt 5499484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 136 - 189
Target Start/End: Original strand, 31520629 - 31520682
Alignment:
Q  136 ggagcacattcccagatcccaagctaataccatcagaccaacccaagtgggttt 189  Q
    |||||||| ||||||||||||||| ||| ||| ||| |||||||||||||||||    
T  31520629 ggagcacactcccagatcccaagccaatgccaccaggccaacccaagtgggttt 31520682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 91 - 176
Target Start/End: Original strand, 47236950 - 47237035
Alignment:
Q  91 cacccaaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccatcagaccaa 176  Q
    ||||||||||||||||| ||| ||| |||| |||||| |||||| |||||||| |||| | |||||| | ||||||| ||| ||||    
T  47236950 cacccaaattggcaccggggagaatcgaacatgagaccttgaagaggagcacactcccgggtcccaaaccaataccaccaggccaa 47237035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 69 - 181
Target Start/End: Complemental strand, 2667981 - 2667869
Alignment:
Q  69 ttttgaagaagctatattaacacacccaaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccat 168  Q
    |||||||||||||| | || | |||| |||||| |||    |||||| ||||||||||| | || |  ||||||| ||||||||||||||| |||||||     
T  2667981 ttttgaagaagctaaactagcccacctaaattgacactagagataatcgaacctgagacctcgaggaagagcacactcccagatcccaagccaataccac 2667882  T
Q  169 cagaccaacccaa 181  Q
    ||| |||||||||    
T  2667881 caggccaacccaa 2667869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 69 - 189
Target Start/End: Complemental strand, 46518747 - 46518627
Alignment:
Q  69 ttttgaagaagctatattaacacacccaaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccat 168  Q
    |||||||||||||| | |||| | | |||||||||| |   || |||  ||||||| || |||| | |||||||| ||||||||||||||| |||||||     
T  46518747 ttttgaagaagctaaactaaccccctcaaattggcatcagagagaatcaaacctgaaaccttgaggaggagcacactcccagatcccaagccaataccac 46518648  T
Q  169 cagaccaacccaagtgggttt 189  Q
     |  |||||||||||||||||    
T  46518647 tatgccaacccaagtgggttt 46518627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 140 - 188
Target Start/End: Complemental strand, 47079749 - 47079701
Alignment:
Q  140 cacattcccagatcccaagctaataccatcagaccaacccaagtgggtt 188  Q
    |||||||| ||||||||||| || |||| ||||||||||||||||||||    
T  47079749 cacattccaagatcccaagccaacaccaccagaccaacccaagtgggtt 47079701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 91 - 185
Target Start/End: Complemental strand, 17035083 - 17034991
Alignment:
Q  91 cacccaaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccatcagaccaacccaagtgg 185  Q
    |||||||||||  |||||||| ||| ||||||||||| |||| |  ||||||  || |||||||||||  ||||||| |||| ||||||||||||    
T  17035083 cacccaaattgataccgaggagaatcgaacctgagaccttgaggatgagcac--tctcagatcccaagtcaataccaccagagcaacccaagtgg 17034991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 110 - 181
Target Start/End: Original strand, 42465528 - 42465599
Alignment:
Q  110 gataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccatcagaccaacccaa 181  Q
    |||||| ||| |||||||||| | | ||||||||  ||||  | ||||||||||||||||||||||||||||    
T  42465528 gataatcgaatctgagactttaaggaggagcacacccccaagttccaagctaataccatcagaccaacccaa 42465599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 96 - 186
Target Start/End: Original strand, 10682928 - 10683017
Alignment:
Q  96 aaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccatcagaccaacccaagtggg 186  Q
    ||||||| ||| |||| ||||||||||||||||||| || | |||||| ||| || || ||||| |||||||  ||| |||||||||||||    
T  10682928 aaattgggaccaaggagaattgaacctgagactttg-agagaagcacactccaaggtctcaagccaataccactagatcaacccaagtggg 10683017  T

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Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 69 - 159
Target Start/End: Complemental strand, 54990821 - 54990731
Alignment:
Q  69 ttttgaagaagctatattaacacacccaaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagc 159  Q
    |||||||||||||| |||| | |||| |||||| || |||||| ||| ||||||||||| |||| | |||||||  ||| || ||||||||    
T  54990821 ttttgaagaagctaaattagcccacctaaattgccatcgaggagaatcgaacctgagaccttgaggaggagcacgctccaaggtcccaagc 54990731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 69 - 190
Target Start/End: Original strand, 11642166 - 11642287
Alignment:
Q  69 ttttgaagaagctatattaacacacccaaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccat 168  Q
    |||||||||||||| | |||| | |  |||||| |||  | |||||| ||||||||||| |||| | ||| |||| || ||||||||||| | ||||||     
T  11642166 ttttgaagaagctaaactaaccctcttaaattgacactaaagataatcgaacctgagaccttgaggaggatcacaatctcagatcccaagtttataccag 11642265  T
Q  169 cagaccaacccaagtgggttta 190  Q
     || |||| |||||||||||||    
T  11642266 taggccaatccaagtgggttta 11642287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 117 - 158
Target Start/End: Complemental strand, 39253768 - 39253727
Alignment:
Q  117 gaacctgagactttgaaggggagcacattcccagatcccaag 158  Q
    ||||||||||| |||||| |||||||| ||||||||||||||    
T  39253768 gaacctgagaccttgaagaggagcacactcccagatcccaag 39253727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 91 - 188
Target Start/End: Original strand, 47810723 - 47810820
Alignment:
Q  91 cacccaaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccatcagaccaacccaagtgggtt 188  Q
    |||||||||||||||||  || |||  |||| ||||| |||  | |||||||| |||||   || |||| ||||||| ||||||||||||||||||||    
T  47810723 cacccaaattggcaccggagagaatcaaacccgagaccttgcggaggagcacactcccaagaccaaagccaataccaccagaccaacccaagtgggtt 47810820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 136 - 188
Target Start/End: Original strand, 2597244 - 2597296
Alignment:
Q  136 ggagcacattcccagatcccaagctaataccatcagaccaacccaagtgggtt 188  Q
    |||||||| ||| | |||| |||| ||||||| ||||||||||||||||||||    
T  2597244 ggagcacactcctaaatccgaagccaataccaccagaccaacccaagtgggtt 2597296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 69 - 165
Target Start/End: Original strand, 8853756 - 8853852
Alignment:
Q  69 ttttgaagaagctatattaacacacccaaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaatac 165  Q
    ||||||||||| || |||||| |||||||||||||||| ||||  || |||| |||||| |  | | |||||| | |||||  ||||||||||||||    
T  8853756 ttttgaagaagttaaattaacccacccaaattggcaccaaggaggatcgaacatgagacctcaaggaggagcatactcccatgtcccaagctaatac 8853852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 69 - 188
Target Start/End: Original strand, 10445096 - 10445216
Alignment:
Q  69 ttttgaagaagctatattaacacacccaaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaa-tacca 167  Q
    |||||||||||||| |||| | ||| |||||| |||||   || ||| ||||||||||| | || | |||||||| |||||| |||||||| || | |||    
T  10445096 ttttgaagaagctaaattagcccactcaaattagcaccagagagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaattgcca 10445195  T
Q  168 tcagaccaacccaagtgggtt 188  Q
      || ||||||||||||||||    
T  10445196 ctaggccaacccaagtgggtt 10445216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 96 - 180
Target Start/End: Complemental strand, 11612391 - 11612307
Alignment:
Q  96 aaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccatcagaccaaccca 180  Q
    |||||||||||| |||  || ||||||||||| || | | |||||||| |||||| |||||||  ||||||| ||| ||||||||    
T  11612391 aaattggcaccggggagcatcgaacctgagaccttaaggaggagcacactcccagctcccaagtgaataccaccaggccaaccca 11612307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 113 - 185
Target Start/End: Original strand, 13808886 - 13808958
Alignment:
Q  113 aattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccatcagaccaacccaagtgg 185  Q
    ||||||||||||||| | || | |||||||| | ||||||||||||  ||||  | |||||||||||||||||    
T  13808886 aattgaacctgagacctagaggaggagcacactgccagatcccaagtcaataagaccagaccaacccaagtgg 13808958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 69 - 185
Target Start/End: Complemental strand, 15034463 - 15034348
Alignment:
Q  69 ttttgaagaagctatattaacacacccaaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccat 168  Q
    |||||||||||| | |||| | |||| |||||||||||  ||| ||||||||||||||| ||| || ||| |||  ||| || |||||||  || ||||     
T  15034463 ttttgaagaagcaaaattagctcaccgaaattggcaccagggagaattgaacctgagaccttg-agaggatcaccctccaaggtcccaaggcaacaccac 15034365  T
Q  169 cagaccaacccaagtgg 185  Q
    ||| |||||||||||||    
T  15034364 caggccaacccaagtgg 15034348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 136 - 188
Target Start/End: Original strand, 31788994 - 31789046
Alignment:
Q  136 ggagcacattcccagatcccaagctaataccatcagaccaacccaagtgggtt 188  Q
    |||||||| ||||||||||||||| |||| ||  || ||||||||||||||||    
T  31788994 ggagcacactcccagatcccaagccaataacactaggccaacccaagtgggtt 31789046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1367 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold1367
Description:

Target: scaffold1367; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 117 - 182
Target Start/End: Original strand, 845 - 910
Alignment:
Q  117 gaacctgagactttgaaggggagcacattcccagatcccaagctaataccatcagaccaacccaag 182  Q
    ||||||||||||| || | |||||||||||||||||||||||| ||||||| ||| ||| ||||||    
T  845 gaacctgagacttcgaggaggagcacattcccagatcccaagccaataccaccaggccaccccaag 910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 96 - 185
Target Start/End: Original strand, 94955 - 95044
Alignment:
Q  96 aaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccatcagaccaacccaagtgg 185  Q
    |||||||||||   |||||||||||||||||| |||| | |||||||| |||||| | |||||| |||||||  || |||||||||||||    
T  94955 aaattggcaccagagataattgaacctgagaccttgaggaggagcacactcccaggttccaagccaataccactaggccaacccaagtgg 95044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0172 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 69 - 189
Target Start/End: Original strand, 15734 - 15854
Alignment:
Q  69 ttttgaagaagctatattaacacacccaaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccat 168  Q
    |||| ||||||||| |||| | ||||||||||||||||| ||| |||  ||| |||||| |||| | |||||| | ||| | ||||||||| |||||||     
T  15734 tttttaagaagctaaattagcccacccaaattggcaccgcggagaatcaaacttgagaccttgaggaggagcatactccaaaatcccaagccaataccac 15833  T
Q  169 cagaccaacccaagtgggttt 189  Q
    ||| |||||  ||||||||||    
T  15834 caggccaacttaagtgggttt 15854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 145 - 189
Target Start/End: Complemental strand, 10262 - 10218
Alignment:
Q  145 tcccagatcccaagctaataccatcagaccaacccaagtgggttt 189  Q
    ||||||||||||||| |||| |||||| |||||||||||||||||    
T  10262 tcccagatcccaagccaatatcatcaggccaacccaagtgggttt 10218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 84 - 188
Target Start/End: Original strand, 14944 - 15047
Alignment:
Q  84 attaacacacccaaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccatcagaccaacccaagt 183  Q
    |||||| |||||||||| || |||  || ||| ||||||||||||| || | |||||| | |||||| ||| |||| |||| |||||||| |||||||||    
T  14944 attaacccacccaaattagccccggagagaatcgaacctgagactt-gaggaggagcatactcccagttcctaagccaatagcatcagactaacccaagt 15042  T
Q  184 gggtt 188  Q
    |||||    
T  15043 gggtt 15047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 68 - 188
Target Start/End: Complemental strand, 112402 - 112282
Alignment:
Q  68 cttttgaagaagctatattaacacacccaaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaatacca 167  Q
    ||||| ||||||||| ||||   |||| ||||||||||||  || ||| |||||| |||| |  ||| ||| |||| |||||||| |||||| ||||| |    
T  112402 ctttttaagaagctaaattagtccacctaaattggcaccggagagaatcgaacctcagacctcaaagaggaccacactcccagattccaagccaatacaa 112303  T
Q  168 tcagaccaacccaagtgggtt 188  Q
     ||| ||||||||||||||||    
T  112302 ccaggccaacccaagtgggtt 112282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 117 - 188
Target Start/End: Original strand, 2475 - 2546
Alignment:
Q  117 gaacctgagactttgaaggggagcacattcccagatcccaagctaataccatcagaccaacccaagtgggtt 188  Q
    ||||||||||| |||| | |||||||| |||||||||| || | ||||||| | ||||||||||| ||||||    
T  2475 gaacctgagaccttgaggaggagcacactcccagatccaaaaccaataccaccggaccaacccaaatgggtt 2546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 73 - 188
Target Start/End: Complemental strand, 24168 - 24053
Alignment:
Q  73 gaagaagctatattaacacacccaaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccatcaga 172  Q
    ||||||| || |||| | ||| |||||||||| |   |||||| |||||||| |||| |||| |||||||| ||| |  |||||||  |||||||| ||     
T  24168 gaagaagttaaattagcccactcaaattggcatcagagataatcgaacctgacacttcgaagaggagcacactcctaagtcccaagtcaataccattagg 24069  T
Q  173 ccaacccaagtgggtt 188  Q
    ||||||||||||||||    
T  24068 ccaacccaagtgggtt 24053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 69 - 188
Target Start/End: Original strand, 41590 - 41709
Alignment:
Q  69 ttttgaagaagctatattaacacacccaaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccat 168  Q
    ||||||||| |||| |||| | ||||||||||| || |   || ||||||||||||||| | || | |||||| | || |||||| ||||| |||||||     
T  41590 ttttgaagaggctaaattagcccacccaaattgacatcagagagaattgaacctgagacctcgaggaggagcatactctcagatctcaagccaataccac 41689  T
Q  169 cagaccaacccaagtgggtt 188  Q
     || ||||||||||||||||    
T  41690 taggccaacccaagtgggtt 41709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 69 - 188
Target Start/End: Original strand, 42478 - 42596
Alignment:
Q  69 ttttgaagaagctatattaacacacccaaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccat 168  Q
    |||||||||||||| |||||| | |  ||||||||||| | || ||| |||||||||||| ||| | |||||| | |||||||| |||||  |||||||     
T  42478 ttttgaagaagctaaattaaccc-cttaaattggcaccaaagagaatcgaacctgagactctgaggaggagcatactcccagattccaagtcaataccac 42576  T
Q  169 cagaccaacccaagtgggtt 188  Q
     || ||||||||| ||||||    
T  42577 taggccaacccaactgggtt 42596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0299 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 117 - 182
Target Start/End: Complemental strand, 11599 - 11534
Alignment:
Q  117 gaacctgagactttgaaggggagcacattcccagatcccaagctaataccatcagaccaacccaag 182  Q
    ||||||||||| | || | |||||||| ||||||||||||||| ||||||| ||| ||| ||||||    
T  11599 gaacctgagacctcgaggaggagcacactcccagatcccaagccaataccaccaggccatcccaag 11534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 91 - 184
Target Start/End: Original strand, 13025 - 13118
Alignment:
Q  91 cacccaaattggcaccgaggataattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccatcagaccaacccaagtg 184  Q
    ||||||||||| || ||  || ||| ||||||||||| |||| | |||||||| ||||||||| ||||| ||||||| ||  |||||| |||||    
T  13025 cacccaaattgacatcggagagaatcgaacctgagaccttgaggaggagcacactcccagatctcaagccaataccaccaagccaaccgaagtg 13118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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