View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16148_low_3 (Length: 279)

Name: NF16148_low_3
Description: NF16148
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16148_low_3
NF16148_low_3
[»] scaffold0553 (1 HSPs)
scaffold0553 (8-270)||(10145-10408)
[»] scaffold0544 (1 HSPs)
scaffold0544 (8-270)||(1475-1738)
[»] chr3 (27 HSPs)
chr3 (8-270)||(23370455-23370718)
chr3 (8-219)||(9534171-9534382)
chr3 (3-219)||(14762758-14762975)
chr3 (3-217)||(20247791-20248006)
chr3 (3-217)||(38310802-38311017)
chr3 (10-217)||(24192799-24193009)
chr3 (10-217)||(55499104-55499313)
chr3 (11-220)||(16801467-16801676)
chr3 (110-228)||(24933820-24933937)
chr3 (165-270)||(17131732-17131837)
chr3 (142-220)||(41455097-41455174)
chr3 (165-270)||(14865846-14865951)
chr3 (165-270)||(12033395-12033499)
chr3 (165-267)||(13302195-13302295)
chr3 (165-267)||(13323742-13323842)
chr3 (165-267)||(13312851-13312951)
chr3 (158-219)||(18929239-18929300)
chr3 (155-219)||(17240513-17240577)
chr3 (146-235)||(10389428-10389517)
chr3 (146-235)||(10414517-10414606)
chr3 (146-235)||(10421187-10421276)
chr3 (165-225)||(51301589-51301649)
chr3 (167-270)||(19235020-19235121)
chr3 (185-221)||(23392818-23392854)
chr3 (163-217)||(16801027-16801081)
chr3 (184-221)||(2247648-2247685)
chr3 (185-221)||(52212430-52212466)
[»] scaffold0026 (2 HSPs)
scaffold0026 (8-225)||(111529-111746)
scaffold0026 (3-220)||(11850-12068)
[»] chr8 (14 HSPs)
chr8 (8-235)||(44477466-44477693)
chr8 (8-235)||(44492624-44492851)
chr8 (3-217)||(8727735-8727950)
chr8 (42-220)||(23866491-23866670)
chr8 (8-128)||(27940946-27941066)
chr8 (165-270)||(24320620-24320725)
chr8 (110-218)||(17054537-17054644)
chr8 (110-219)||(18614217-18614327)
chr8 (155-219)||(23482053-23482117)
chr8 (164-229)||(25111976-25112041)
chr8 (163-219)||(39364919-39364975)
chr8 (165-219)||(29643386-29643440)
chr8 (164-221)||(14056562-14056619)
chr8 (163-219)||(21931696-21931752)
[»] chr5 (21 HSPs)
chr5 (8-220)||(38144536-38144748)
chr5 (8-219)||(19512229-19512441)
chr5 (8-219)||(28370055-28370266)
chr5 (3-220)||(22750979-22751197)
chr5 (110-220)||(23528577-23528686)
chr5 (165-270)||(19236900-19237005)
chr5 (167-270)||(22461158-22461261)
chr5 (167-270)||(22467782-22467885)
chr5 (155-219)||(18407944-18408008)
chr5 (164-221)||(22438746-22438803)
chr5 (155-219)||(23111200-23111264)
chr5 (165-270)||(20781744-20781847)
chr5 (165-270)||(20772969-20773072)
chr5 (165-270)||(28909240-28909344)
chr5 (165-270)||(28945635-28945739)
chr5 (110-225)||(34830029-34830144)
chr5 (165-270)||(28895992-28896096)
chr5 (165-270)||(28924818-28924922)
chr5 (191-221)||(17021912-17021942)
chr5 (185-221)||(21663141-21663177)
chr5 (185-221)||(22356902-22356938)
[»] chr2 (18 HSPs)
chr2 (8-219)||(6483561-6483772)
chr2 (8-219)||(6487028-6487239)
chr2 (8-219)||(19661454-19661665)
chr2 (24-220)||(26583687-26583882)
chr2 (10-219)||(23101463-23101673)
chr2 (10-217)||(23089057-23089265)
chr2 (10-217)||(23878853-23879060)
chr2 (148-270)||(26885166-26885287)
chr2 (165-269)||(25180880-25180984)
chr2 (136-270)||(27207669-27207803)
chr2 (165-267)||(10577-10679)
chr2 (110-225)||(5706018-5706133)
chr2 (167-270)||(23168249-23168351)
chr2 (167-270)||(23579506-23579608)
chr2 (155-219)||(23265133-23265197)
chr2 (155-219)||(23280201-23280265)
chr2 (158-219)||(21908353-21908414)
chr2 (163-219)||(24661576-24661632)
[»] chr7 (32 HSPs)
chr7 (8-220)||(14422827-14423040)
chr7 (8-219)||(16009420-16009631)
chr7 (3-215)||(10895795-10896008)
chr7 (3-219)||(15168013-15168230)
chr7 (3-220)||(18873198-18873416)
chr7 (8-220)||(13743552-13743764)
chr7 (42-220)||(12709843-12710022)
chr7 (42-220)||(13122914-13123093)
chr7 (24-217)||(16677152-16677348)
chr7 (24-217)||(17651388-17651584)
chr7 (11-220)||(12590643-12590851)
chr7 (110-220)||(13007378-13007487)
chr7 (165-270)||(2971254-2971359)
chr7 (136-270)||(14319579-14319713)
chr7 (164-270)||(14567203-14567309)
chr7 (165-270)||(20906411-20906516)
chr7 (165-270)||(29181058-29181164)
chr7 (168-270)||(16091078-16091181)
chr7 (136-270)||(14230752-14230886)
chr7 (164-219)||(11382871-11382926)
chr7 (164-219)||(11389348-11389403)
chr7 (164-221)||(20311050-20311107)
chr7 (164-221)||(21230958-21231015)
chr7 (156-219)||(13679485-13679548)
chr7 (167-235)||(31155396-31155464)
chr7 (165-219)||(11311059-11311113)
chr7 (163-219)||(46625961-46626017)
chr7 (184-220)||(831633-831669)
chr7 (184-220)||(1196813-1196849)
chr7 (165-225)||(2465361-2465421)
chr7 (165-225)||(3857360-3857419)
chr7 (184-220)||(34958578-34958614)
[»] chr6 (35 HSPs)
chr6 (8-225)||(10986175-10986393)
chr6 (8-219)||(23839041-23839253)
chr6 (8-219)||(4477700-4477912)
chr6 (3-219)||(23057776-23057993)
chr6 (1-220)||(29614146-29614366)
chr6 (10-220)||(18800282-18800493)
chr6 (86-220)||(930095-930229)
chr6 (10-217)||(21565214-21565422)
chr6 (110-220)||(12168309-12168418)
chr6 (110-220)||(19287218-19287327)
chr6 (110-220)||(19785869-19785978)
chr6 (110-220)||(19878402-19878511)
chr6 (137-225)||(34639981-34640069)
chr6 (110-220)||(19884178-19884287)
chr6 (137-225)||(34646655-34646743)
chr6 (114-221)||(25469703-25469808)
chr6 (136-270)||(31252394-31252529)
chr6 (167-270)||(20007897-20007999)
chr6 (164-221)||(24512842-24512899)
chr6 (131-270)||(11288620-11288758)
chr6 (192-270)||(28288461-28288537)
chr6 (167-219)||(9187498-9187550)
chr6 (163-219)||(25348486-25348542)
chr6 (163-217)||(25598643-25598697)
chr6 (165-270)||(21364433-21364537)
chr6 (165-270)||(23968415-23968519)
chr6 (167-235)||(15458492-15458560)
chr6 (167-235)||(15465087-15465155)
chr6 (163-219)||(25397172-25397228)
chr6 (167-270)||(9099023-9099124)
chr6 (163-219)||(19471335-19471391)
chr6 (163-217)||(2286769-2286823)
chr6 (185-219)||(18659450-18659484)
chr6 (185-219)||(24441673-24441707)
chr6 (185-221)||(29847278-29847314)
[»] chr1 (17 HSPs)
chr1 (8-219)||(20437024-20437236)
chr1 (110-220)||(41111981-41112090)
chr1 (165-270)||(20851082-20851187)
chr1 (165-270)||(20857709-20857814)
chr1 (165-270)||(21706276-21706381)
chr1 (165-270)||(21710818-21710923)
chr1 (155-219)||(32651563-32651627)
chr1 (155-219)||(18712790-18712854)
chr1 (164-219)||(19663517-19663572)
chr1 (163-219)||(20805320-20805376)
chr1 (164-219)||(11158093-11158148)
chr1 (163-217)||(10811785-10811839)
chr1 (167-261)||(20044910-20045004)
chr1 (189-219)||(24476350-24476380)
chr1 (189-219)||(25091418-25091448)
chr1 (185-218)||(18271338-18271371)
chr1 (185-218)||(18275992-18276025)
[»] scaffold0029 (3 HSPs)
scaffold0029 (1-220)||(111717-111938)
scaffold0029 (165-225)||(91197-91257)
scaffold0029 (165-225)||(96923-96983)
[»] scaffold0025 (1 HSPs)
scaffold0025 (10-217)||(14398-14607)
[»] scaffold1773 (1 HSPs)
scaffold1773 (3-220)||(1017-1233)
[»] scaffold0006 (1 HSPs)
scaffold0006 (3-220)||(50018-50234)
[»] scaffold0247 (1 HSPs)
scaffold0247 (10-220)||(11186-11397)
[»] scaffold0924 (1 HSPs)
scaffold0924 (3-220)||(750-968)
[»] scaffold0058 (1 HSPs)
scaffold0058 (8-220)||(135-346)
[»] chr4 (16 HSPs)
chr4 (3-220)||(8045832-8046049)
chr4 (3-220)||(11847945-11848169)
chr4 (110-225)||(53483650-53483765)
chr4 (164-221)||(15408139-15408196)
chr4 (165-247)||(16146803-16146885)
chr4 (163-219)||(8834895-8834951)
chr4 (163-219)||(13888641-13888697)
chr4 (110-225)||(27906210-27906326)
chr4 (136-217)||(14486632-14486713)
chr4 (163-219)||(15245215-15245271)
chr4 (163-214)||(22724691-22724742)
chr4 (163-219)||(15308120-15308176)
chr4 (163-221)||(14912081-14912139)
chr4 (189-219)||(15069781-15069811)
chr4 (189-219)||(15076381-15076411)
chr4 (184-220)||(15747556-15747592)
[»] scaffold0117 (2 HSPs)
scaffold0117 (8-220)||(8574-8786)
scaffold0117 (3-220)||(1897-2114)
[»] scaffold0154 (1 HSPs)
scaffold0154 (24-220)||(30715-30913)
[»] scaffold0077 (1 HSPs)
scaffold0077 (10-217)||(3624-3832)
[»] scaffold0090 (1 HSPs)
scaffold0090 (7-220)||(18010-18225)
[»] scaffold0476 (1 HSPs)
scaffold0476 (10-217)||(3295-3504)
[»] scaffold0127 (1 HSPs)
scaffold0127 (165-270)||(10239-10344)
[»] scaffold0001 (1 HSPs)
scaffold0001 (148-270)||(492978-493099)
[»] scaffold0796 (2 HSPs)
scaffold0796 (33-261)||(1691-1917)
scaffold0796 (33-261)||(5714-5940)
[»] scaffold0456 (4 HSPs)
scaffold0456 (137-220)||(904-987)
scaffold0456 (137-220)||(8049-8132)
scaffold0456 (8-75)||(832-899)
scaffold0456 (8-75)||(7977-8044)
[»] scaffold1318 (1 HSPs)
scaffold1318 (165-270)||(1862-1967)
[»] scaffold0023 (2 HSPs)
scaffold0023 (165-270)||(135438-135543)
scaffold0023 (185-221)||(163352-163388)
[»] scaffold0129 (1 HSPs)
scaffold0129 (110-221)||(45273-45384)
[»] scaffold0720 (1 HSPs)
scaffold0720 (136-270)||(3352-3486)
[»] scaffold0053 (1 HSPs)
scaffold0053 (165-270)||(79439-79545)
[»] scaffold0222 (1 HSPs)
scaffold0222 (155-219)||(16811-16875)
[»] scaffold0004 (2 HSPs)
scaffold0004 (155-219)||(116887-116951)
scaffold0004 (185-218)||(60441-60474)
[»] scaffold0072 (1 HSPs)
scaffold0072 (165-270)||(49919-50025)
[»] scaffold0609 (1 HSPs)
scaffold0609 (136-270)||(5806-5941)
[»] scaffold0310 (1 HSPs)
scaffold0310 (164-221)||(17643-17700)
[»] scaffold0131 (1 HSPs)
scaffold0131 (165-270)||(997-1101)
[»] scaffold0107 (1 HSPs)
scaffold0107 (164-221)||(40530-40587)
[»] scaffold0019 (1 HSPs)
scaffold0019 (164-221)||(135473-135530)
[»] scaffold0461 (1 HSPs)
scaffold0461 (155-219)||(8-72)
[»] scaffold0348 (1 HSPs)
scaffold0348 (165-233)||(9336-9404)
[»] scaffold0146 (1 HSPs)
scaffold0146 (155-219)||(13623-13687)
[»] scaffold0020 (1 HSPs)
scaffold0020 (155-219)||(101928-101992)
[»] scaffold0235 (1 HSPs)
scaffold0235 (166-218)||(22594-22646)
[»] scaffold0124 (2 HSPs)
scaffold0124 (164-219)||(34276-34331)
scaffold0124 (163-221)||(35437-35495)
[»] scaffold0138 (1 HSPs)
scaffold0138 (163-219)||(12296-12352)
[»] scaffold0634 (1 HSPs)
scaffold0634 (4-59)||(3501-3556)
[»] scaffold0317 (1 HSPs)
scaffold0317 (156-219)||(1378-1441)
[»] scaffold0139 (1 HSPs)
scaffold0139 (164-219)||(14997-15052)
[»] scaffold0249 (1 HSPs)
scaffold0249 (146-235)||(13879-13969)
[»] scaffold0453 (1 HSPs)
scaffold0453 (136-224)||(10546-10634)
[»] scaffold0261 (1 HSPs)
scaffold0261 (165-225)||(23564-23624)
[»] scaffold0815 (1 HSPs)
scaffold0815 (168-219)||(1453-1504)
[»] scaffold0096 (1 HSPs)
scaffold0096 (163-218)||(39508-39563)
[»] scaffold0384 (1 HSPs)
scaffold0384 (167-261)||(16023-16117)
[»] scaffold0335 (1 HSPs)
scaffold0335 (163-219)||(2628-2684)
[»] scaffold0034 (1 HSPs)
scaffold0034 (110-217)||(73229-73337)
[»] scaffold2054 (1 HSPs)
scaffold2054 (131-220)||(680-770)
[»] scaffold0481 (1 HSPs)
scaffold0481 (173-218)||(676-721)
[»] scaffold0962 (1 HSPs)
scaffold0962 (185-221)||(614-650)
[»] scaffold0600 (1 HSPs)
scaffold0600 (163-219)||(732-788)
[»] scaffold0422 (1 HSPs)
scaffold0422 (169-221)||(3962-4014)
[»] scaffold0181 (1 HSPs)
scaffold0181 (185-221)||(25519-25555)
[»] scaffold0180 (1 HSPs)
scaffold0180 (170-219)||(11630-11681)
[»] scaffold0031 (2 HSPs)
scaffold0031 (163-219)||(121902-121958)
scaffold0031 (163-219)||(132778-132834)
[»] scaffold0028 (1 HSPs)
scaffold0028 (167-219)||(69749-69801)


Alignment Details
Target: scaffold0553 (Bit Score: 232; Significance: 1e-128; HSPs: 1)
Name: scaffold0553
Description:

Target: scaffold0553; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 8 - 270
Target Start/End: Complemental strand, 10408 - 10145
Alignment:
Q  8 aatttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacattacaatagaattaacatgatcaatacccatacccctc 107  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||    
T  10408 aatttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacattacaacagaattaacatgatcaatacccattcccctc 10309  T
Q  108 ataatcatcatcaaaccctaaccctcaatttatcttcc-aaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtct 206  Q
    | |||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  10308 agaatcatcatcaaaccctaacccacaatttatcttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtcc 10209  T
Q  207 cacccttaccttagaattgtagagacaaaaagcacagcaaatccgttcctaagttcttctctct 270  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  10208 cacccttaccttagaattgtatagacaaaaagcacagcaaatccgttcctaagttcttctctct 10145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544 (Bit Score: 232; Significance: 1e-128; HSPs: 1)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 8 - 270
Target Start/End: Complemental strand, 1738 - 1475
Alignment:
Q  8 aatttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacattacaatagaattaacatgatcaatacccatacccctc 107  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||    
T  1738 aatttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacattacaacagaattaacatgatcaatacccattcccctc 1639  T
Q  108 ataatcatcatcaaaccctaaccctcaatttatcttcc-aaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtct 206  Q
    | |||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  1638 agaatcatcatcaaaccctaacccacaatttatcttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtcc 1539  T
Q  207 cacccttaccttagaattgtagagacaaaaagcacagcaaatccgttcctaagttcttctctct 270  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  1538 cacccttaccttagaattgtatagacaaaaagcacagcaaatccgttcctaagttcttctctct 1475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 232; Significance: 1e-128; HSPs: 27)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 8 - 270
Target Start/End: Complemental strand, 23370718 - 23370455
Alignment:
Q  8 aatttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacattacaatagaattaacatgatcaatacccatacccctc 107  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||    
T  23370718 aatttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacattacaacagaattaacatgatcaatacccattcccctc 23370619  T
Q  108 ataatcatcatcaaaccctaaccctcaatttatcttcc-aaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtct 206  Q
    | |||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  23370618 agaatcatcatcaaaccctaacccacaatttatcttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtcc 23370519  T
Q  207 cacccttaccttagaattgtagagacaaaaagcacagcaaatccgttcctaagttcttctctct 270  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  23370518 cacccttaccttagaattgtatagacaaaaagcacagcaaatccgttcctaagttcttctctct 23370455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 8 - 219
Target Start/End: Original strand, 9534171 - 9534382
Alignment:
Q  8 aatttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacattacaatagaattaacatgatcaatacccatacccctc 107  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| || |||    
T  9534171 aatttcaatcaatttatgatcacgacaacagtatagattaagttttcattctaaacattacattacaacagaattaacatgatcaatacccattccactc 9534270  T
Q  108 ataatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctc 207  Q
    | ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9534271 agaatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctc 9534370  T
Q  208 acccttacctta 219  Q
    ||||||||||||    
T  9534371 acccttacctta 9534382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 3 - 219
Target Start/End: Complemental strand, 14762975 - 14762758
Alignment:
Q  3 tcataaatttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacattacaatagaattaacatgatcaatacccatac 102  Q
    |||||| |||||||||||||||||||||| || ||  | |||||||||||||||||| ||||||| ||||||| |||||||||||||||| |||||||      
T  14762975 tcataattttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagagaattaacatgatcattacccattt 14762876  T
Q  103 ccct-cataatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagat 201  Q
    |||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  14762875 cccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagat 14762776  T
Q  202 agtctcacccttacctta 219  Q
    ||||||||||||||||||    
T  14762775 agtctcacccttacctta 14762758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 3 - 217
Target Start/End: Complemental strand, 20248006 - 20247791
Alignment:
Q  3 tcataaatttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacattacaatagaattaacatgatcaatacccatac 102  Q
    |||||| |||||||||||||||||||||| || ||  | |||||||||||||||||| ||||||| ||||||| | |||||||||||||| |||||||      
T  20248006 tcataattttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagaaaattaacatgatcattacccattt 20247907  T
Q  103 ccct-cataatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagat 201  Q
    |||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20247906 cccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagat 20247807  T
Q  202 agtctcacccttacct 217  Q
    ||||||||||||||||    
T  20247806 agtctcacccttacct 20247791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 3 - 217
Target Start/End: Complemental strand, 38311017 - 38310802
Alignment:
Q  3 tcataaatttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacattacaatagaattaacatgatcaatacccatac 102  Q
    |||||| |||||||||||||||||||||| || ||  | |||||||||||||||||| ||||||| ||||||| |||||||||||||||| |||||||      
T  38311017 tcataattttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagagaattaacatgatcattacccattt 38310918  T
Q  103 ccct-cataatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagat 201  Q
    |||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||    
T  38310917 cccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaatattcagaaattatagattatgattatcgagagat 38310818  T
Q  202 agtctcacccttacct 217  Q
    ||||||||||||||||    
T  38310817 agtctcacccttacct 38310802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 10 - 217
Target Start/End: Original strand, 24192799 - 24193009
Alignment:
Q  10 tttcaatcaatttatgat-cacaacaacagtatagattaagttttcattctaaacattacattacaatagaattaacatgatcaatacccatacccct-c 107  Q
    ||||||||| |||||||| |||| |||||| |||||||||||||||||||| ||||| ||||||||| |||||||||||||||| |||||||  |||| |    
T  24192799 tttcaatcagtttatgattcacagcaacagcatagattaagttttcattctgaacatcacattacaacagaattaacatgatcattacccatttcccttc 24192898  T
Q  108 ataatcatcatcaaaccctaaccctcaatttatcttccaaaa-ctatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtct 206  Q
    | |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24192899 agaatcatcatcaaaccctaaccctcaatttatcttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtct 24192998  T
Q  207 cacccttacct 217  Q
    |||||||||||    
T  24192999 cacccttacct 24193009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 10 - 217
Target Start/End: Complemental strand, 55499313 - 55499104
Alignment:
Q  10 tttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacattacaatagaattaacatgatcaatacccatacccctcat 109  Q
    |||||||||||||||||||||| |||| |||||||||||| ||||||||  ||||| ||||||||| | |||||||||||||| ||||||| |||||||     
T  55499313 tttcaatcaatttatgatcacagcaactgtatagattaagatttcattccgaacatcacattacaacataattaacatgatcattacccattcccctcag 55499214  T
Q  110 aatcatcatcaaaccctaaccctcaa-tttatcttccaaaactatgcaattaggtcaatttt-cagaaattatagattat-gattattgagagatagtct 206  Q
    |||||||||||||||||||||||||| |||||| | |||   || ||| ||||||||||||| | ||||||| | |||||  |||| |||||||||||||    
T  55499213 aatcatcatcaaaccctaaccctcaattttatcct-caaggttaagcagttaggtcaattttcccgaaattacatattatctattaatgagagatagtct 55499115  T
Q  207 cacccttacct 217  Q
    |||||||||||    
T  55499114 cacccttacct 55499104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 11 - 220
Target Start/End: Complemental strand, 16801676 - 16801467
Alignment:
Q  11 ttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacattacaatagaattaacatgatcaatac-ccatacccctcat 109  Q
    |||| |||| || |||||||||||  | ||||| |||||  |||||||||||||| ||||||||  | | |||||||||||| ||| |||| | |||||     
T  16801676 ttcattcaaattgtgatcacaacattattataggttaagaattcattctaaacatcacattacagcatatttaacatgatcattacaccattctcctcaa 16801577  T
Q  110 aatcatcatcaaaccctaaccctcaattt-atcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctca 208  Q
    |||||||||||| |||||||| ||||||| |||||| ||| ||| ||||| |||||||||||||||||||||| || |||||||||||||||||||||||    
T  16801576 aatcatcatcaa-ccctaaccttcaattttatcttcaaaagctaagcaatcaggtcaattttcagaaattatatat-atgattattgagagatagtctca 16801479  T
Q  209 cccttaccttag 220  Q
    ||||||||||||    
T  16801478 cccttaccttag 16801467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 110 - 228
Target Start/End: Complemental strand, 24933937 - 24933820
Alignment:
Q  110 aatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcac 209  Q
    |||||||||||||||||||   |||  |||| |||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  24933937 aatcatcatcaaaccctaattttcatattattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcac 24933839  T
Q  210 ccttaccttagaattgtag 228  Q
    |||||||||||||||||||    
T  24933838 ccttaccttagaattgtag 24933820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 165 - 270
Target Start/End: Original strand, 17131732 - 17131837
Alignment:
Q  165 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtagagacaaaaagcacagcaaatccgttcctaagttctt 264  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||||||| | ||||||||||||||||||||| ||||||||||||||    
T  17131732 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaaaagcacagcaaatcagttcctaagttctt 17131831  T
Q  265 ctctct 270  Q
    ||||||    
T  17131832 ctctct 17131837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 142 - 220
Target Start/End: Complemental strand, 41455174 - 41455097
Alignment:
Q  142 ttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 220  Q
    |||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41455174 ttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcacccttaccttag 41455097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 165 - 270
Target Start/End: Original strand, 14865846 - 14865951
Alignment:
Q  165 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtagagacaaaaagcacagcaaatccgttcctaagttctt 264  Q
    ||||||||||||||| | ||||||| |||||| ||||| || ||||||||||||||||||| | ||||||| ||||||||||||| ||||||||||||||    
T  14865846 aattttcagaaattacatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaatagcacagcaaatcagttcctaagttctt 14865945  T
Q  265 ctctct 270  Q
    ||||||    
T  14865946 ctctct 14865951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 165 - 270
Target Start/End: Complemental strand, 12033499 - 12033395
Alignment:
Q  165 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtagagacaaaaagcacagcaaatccgttcctaagttctt 264  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||||||| | |||| ||||||||| |||||| ||||||||||||||    
T  12033499 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagac-aaaagcacatcaaatcagttcctaagttctt 12033401  T
Q  265 ctctct 270  Q
    ||||||    
T  12033400 ctctct 12033395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 165 - 267
Target Start/End: Complemental strand, 13302295 - 13302195
Alignment:
Q  165 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtagagacaaaaagcacagcaaatccgttcctaagttctt 264  Q
    ||||||||||||||| | |||||||||||||| ||||| |||||||||||||||||||||||  ||| ||||| ||||||||||| ||||||| |||| |    
T  13302295 aattttcagaaattacatattatgattattgaaagataatctcacccttaccttagaattgt--agaaaaaaaacacagcaaatcagttcctaggttcat 13302198  T
Q  265 ctc 267  Q
    |||    
T  13302197 ctc 13302195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 165 - 267
Target Start/End: Complemental strand, 13323842 - 13323742
Alignment:
Q  165 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtagagacaaaaagcacagcaaatccgttcctaagttctt 264  Q
    ||||||||||||||| | |||||||||||||| ||||| |||||||||||||||||||||||||| | |||||   ||||||||| ||||||| ||||||    
T  13323842 aattttcagaaattacatattatgattattgaaagataatctcacccttaccttagaattgtagaaaaaaaaa--tcagcaaatcagttcctaggttctt 13323745  T
Q  265 ctc 267  Q
    |||    
T  13323744 ctc 13323742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 165 - 267
Target Start/End: Complemental strand, 13312951 - 13312851
Alignment:
Q  165 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtagagacaaaaagcacagcaaatccgttcctaagttctt 264  Q
    |||||||| |||||| | |||||||||||||| ||||| |||||||||||||||||||||||  ||| ||||| ||||||||||| ||||||| |||| |    
T  13312951 aattttcaaaaattacatattatgattattgaaagataatctcacccttaccttagaattgt--agaaaaaaaacacagcaaatcagttcctaggttcat 13312854  T
Q  265 ctc 267  Q
    |||    
T  13312853 ctc 13312851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 158 - 219
Target Start/End: Original strand, 18929239 - 18929300
Alignment:
Q  158 ttaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 219  Q
    |||| ||||||||||||||||||| || ||||||||||||||||||||||||||||||||||    
T  18929239 ttagatcaattttcagaaattatatatcatgattattgagagatagtctcacccttacctta 18929300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 155 - 219
Target Start/End: Complemental strand, 17240577 - 17240513
Alignment:
Q  155 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 219  Q
    ||||||| ||||||||||||||||||  |||| ||||||||||||||||||||||||||||||||    
T  17240577 caattagatcaattttcagaaattatgtattaagattattgagagatagtctcacccttacctta 17240513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 146 - 235
Target Start/End: Complemental strand, 10389517 - 10389428
Alignment:
Q  146 aaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtagagacaaa 235  Q
    |||||||| ||||||| | | ||||||||||||||| ||||| || ||||| ||||| || ||||||||||||||||||| | |||||||    
T  10389517 aaaactattcaattagattacttttcagaaattatacattataatcattgaaagataatcccacccttaccttagaattgcaaagacaaa 10389428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 146 - 235
Target Start/End: Complemental strand, 10414606 - 10414517
Alignment:
Q  146 aaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtagagacaaa 235  Q
    |||||||| ||||||| | | ||||||||||||||| ||||| || ||||| ||||| || ||||||||||||||||||| | |||||||    
T  10414606 aaaactattcaattagattacttttcagaaattatacattataatcattgaaagataatcccacccttaccttagaattgcaaagacaaa 10414517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 146 - 235
Target Start/End: Complemental strand, 10421276 - 10421187
Alignment:
Q  146 aaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtagagacaaa 235  Q
    |||||||| ||||||| | | ||||||||||||||| ||||| || ||||| ||||| || ||||||||||||||||||| | |||||||    
T  10421276 aaaactattcaattagattacttttcagaaattatacattataatcattgaaagataatcccacccttaccttagaattgcaaagacaaa 10421187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 165 - 225
Target Start/End: Original strand, 51301589 - 51301649
Alignment:
Q  165 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattg 225  Q
    ||||||||||||||| | |||||||||||||  ||||| ||||||||||||||||||||||    
T  51301589 aattttcagaaattacatattatgattattggaagataatctcacccttaccttagaattg 51301649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 167 - 270
Target Start/End: Complemental strand, 19235121 - 19235020
Alignment:
Q  167 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtagagacaaaaagcacagcaaatccgttcctaagttcttct 266  Q
    ||||||||||| ||| ||||| | |||||| ||||| || ||||||||||||||||||| | ||  | ||||  |||||||||  |||||||| ||||||    
T  19235121 ttttcagaaatcatatattataactattgaaagataatcccacccttaccttagaattgcaaag--ataaagtgcagcaaatcaattcctaagctcttct 19235024  T
Q  267 ctct 270  Q
    ||||    
T  19235023 ctct 19235020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 221
Target Start/End: Complemental strand, 23392854 - 23392818
Alignment:
Q  185 tatgattattgagagatagtctcacccttaccttaga 221  Q
    ||||||||||||||| |||||||||||||||||||||    
T  23392854 tatgattattgagagttagtctcacccttaccttaga 23392818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 217
Target Start/End: Original strand, 16801027 - 16801081
Alignment:
Q  163 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacct 217  Q
    ||||||||||||| ||||| ||||  || |||||||| |||||||||||||||||    
T  16801027 tcaattttcagaagttatatattacaatcattgagagttagtctcacccttacct 16801081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 221
Target Start/End: Complemental strand, 2247685 - 2247648
Alignment:
Q  184 ttatgattattgagagatagtctcacccttaccttaga 221  Q
    |||| ||||||||||| |||||||||||||||||||||    
T  2247685 ttataattattgagagttagtctcacccttaccttaga 2247648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 221
Target Start/End: Complemental strand, 52212466 - 52212430
Alignment:
Q  185 tatgattattgagagatagtctcacccttaccttaga 221  Q
    ||||||||||||||| ||| |||||||||||||||||    
T  52212466 tatgattattgagagttagcctcacccttaccttaga 52212430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 202; Significance: 1e-110; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 8 - 225
Target Start/End: Original strand, 111529 - 111746
Alignment:
Q  8 aatttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacattacaatagaattaacatgatcaatacccatacccctc 107  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||    
T  111529 aatttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacattacaacagaattaacatgatcaatacccattcccctc 111628  T
Q  108 ataatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctc 207  Q
    | ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  111629 agaatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctc 111728  T
Q  208 acccttaccttagaattg 225  Q
    ||||||||||||||||||    
T  111729 acccttaccttagaattg 111746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 3 - 220
Target Start/End: Complemental strand, 12068 - 11850
Alignment:
Q  3 tcataaatttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacattacaatagaattaacatgatcaatacccatac 102  Q
    ||||||||||||||||| ||||||||||| |||||  | |||||||||||||||||| || |||| ||||||| |||||||||||||||| |||||||      
T  12068 tcataaatttcaatcaacttatgatcacagcaacaacaaagattaagttttcattctgaagattatattacaagagaattaacatgatcattacccattt 11969  T
Q  103 ccct-cataatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagat 201  Q
    |||| || |||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11968 cccttcagaatcatcatcaaaccctaactctcaatttattttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagat 11869  T
Q  202 agtctcacccttaccttag 220  Q
    |||||||||||||||||||    
T  11868 agtctcacccttaccttag 11850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 200; Significance: 1e-109; HSPs: 14)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 8 - 235
Target Start/End: Original strand, 44477466 - 44477693
Alignment:
Q  8 aatttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacattacaatagaattaacatgatcaatacccatacccctc 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| ||||||    
T  44477466 aatttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacgttacaacagaattaacatgatcaatacccattcccctc 44477565  T
Q  108 ataatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctc 207  Q
    | ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44477566 aaaatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctc 44477665  T
Q  208 acccttaccttagaattgtagagacaaa 235  Q
    |||||||||||||||||||  |||||||    
T  44477666 acccttaccttagaattgtgaagacaaa 44477693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 8 - 235
Target Start/End: Original strand, 44492624 - 44492851
Alignment:
Q  8 aatttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacattacaatagaattaacatgatcaatacccatacccctc 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| ||||||    
T  44492624 aatttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacgttacaacagaattaacatgatcaatacccattcccctc 44492723  T
Q  108 ataatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctc 207  Q
    | ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44492724 aaaatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctc 44492823  T
Q  208 acccttaccttagaattgtagagacaaa 235  Q
    |||||||||||||||||||  |||||||    
T  44492824 acccttaccttagaattgtgaagacaaa 44492851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 3 - 217
Target Start/End: Complemental strand, 8727950 - 8727735
Alignment:
Q  3 tcataaatttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacattacaatagaattaacatgatcaatacccatac 102  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||    
T  8727950 tcataattttcaatcaatttatgatcacaacaacagtatagattaagttttcattctgaacattacattacaacagaattaacatgatcaatacccatac 8727851  T
Q  103 ccctcataatcatcatcaaaccctaaccctcaatttatcttcc-aaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagat 201  Q
    |||||| ||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  8727850 ccctcagaatcatcgtcaaaccctaaccctcaatttatcttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagggat 8727751  T
Q  202 agtctcacccttacct 217  Q
    | ||||||||||||||    
T  8727750 aatctcacccttacct 8727735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 42 - 220
Target Start/End: Original strand, 23866491 - 23866670
Alignment:
Q  42 agattaagttttcattctaaacattacattacaa-tagaattaacatgatcaatacccatacccct-cataatcatcatcaaaccctaaccctcaattta 139  Q
    |||||||||||  ||||| ||||||| ||||||| ||||||||||||||||| |||||||  | || |||||||||||||||||||||||||||||||||    
T  23866491 agattaagtttatattctgaacattatattacaaatagaattaacatgatcattacccatttctcttcataatcatcatcaaaccctaaccctcaattta 23866590  T
Q  140 tcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 220  Q
    | ||||||||||||||||||||||||| |||||| ||||||| ||||||||||||||||||||||||||||||||||||||    
T  23866591 ttttccaaaactatgcaattaggtcaa-tttcaggaattataaattatgattattgagagatagtctcacccttaccttag 23866670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 8 - 128
Target Start/End: Complemental strand, 27941066 - 27940946
Alignment:
Q  8 aatttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacattacaatagaattaacatgatcaatacccatacccctc 107  Q
    |||||||||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||| |||||||||||||||||||||||| ||||||    
T  27941066 aatttcaatcaatttatgatcataacaacagtatagattaaattttcattctgaacattacattacaacagaattaacatgatcaatacccattcccctc 27940967  T
Q  108 ataatcatcatcaaaccctaa 128  Q
    | |||||||||||||||||||    
T  27940966 agaatcatcatcaaaccctaa 27940946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 165 - 270
Target Start/End: Complemental strand, 24320725 - 24320620
Alignment:
Q  165 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtagagacaaaaagcacagcaaatccgttcctaagttctt 264  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||||||| | ||||||||||||||||||||| ||||||||||||||    
T  24320725 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaaaagcacagcaaatcagttcctaagttctt 24320626  T
Q  265 ctctct 270  Q
    ||||||    
T  24320625 ctctct 24320620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 110 - 218
Target Start/End: Original strand, 17054537 - 17054644
Alignment:
Q  110 aatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcac 209  Q
    ||||||||||||||||||||  |||  |||| |||||||||||| ||||||||||||||| ||| |||||||||||||||||||||||||||||||||||    
T  17054537 aatcatcatcaaaccctaactttcatcttattttccaaaactattcaattaggtcaattt-caggaattatagattatgattattgagagatagtctcac 17054635  T
Q  210 ccttacctt 218  Q
    |||||||||    
T  17054636 ccttacctt 17054644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 110 - 219
Target Start/End: Original strand, 18614217 - 18614327
Alignment:
Q  110 aatcatcatcaaaccctaaccctcaattt-atcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctca 208  Q
    ||||| ||| |||||||||  |||||||| |||||| | ||| || ||||| | ||||||||||||||||||| || |||||||||||||||||||||||    
T  18614217 aatcagcataaaaccctaattctcaattttatcttcaagaacaattcaattggatcaattttcagaaattatatatcatgattattgagagatagtctca 18614316  T
Q  209 cccttacctta 219  Q
    |||||||||||    
T  18614317 cccttacctta 18614327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 155 - 219
Target Start/End: Complemental strand, 23482117 - 23482053
Alignment:
Q  155 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 219  Q
    ||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  23482117 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 23482053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 164 - 229
Target Start/End: Original strand, 25111976 - 25112041
Alignment:
Q  164 caattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtaga 229  Q
    |||||||||||| ||| | | ||| ||||||||||||||||||||||||||||||||| |||||||    
T  25111976 caattttcagaatttacatactattattattgagagatagtctcacccttaccttagatttgtaga 25112041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 163 - 219
Target Start/End: Original strand, 39364919 - 39364975
Alignment:
Q  163 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 219  Q
    |||||||||||||||| || | ||| |||||||||||||||||||||||||||||||    
T  39364919 tcaattttcagaaattctatactattattattgagagatagtctcacccttacctta 39364975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 165 - 219
Target Start/End: Complemental strand, 29643440 - 29643386
Alignment:
Q  165 aattttcagaaattatagattatgattattgagagatagtctcacccttacctta 219  Q
    ||||||||||||||| | |||||||||||||| ||||| ||||||||||||||||    
T  29643440 aattttcagaaattacatattatgattattgaaagataatctcacccttacctta 29643386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 164 - 221
Target Start/End: Complemental strand, 14056619 - 14056562
Alignment:
Q  164 caattttcagaaattatagattatgattattgagagatagtctcacccttaccttaga 221  Q
    |||||||||||| ||| | | ||| |||||||||||||||||||||||||||||||||    
T  14056619 caattttcagaatttacatactattattattgagagatagtctcacccttaccttaga 14056562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 163 - 219
Target Start/End: Original strand, 21931696 - 21931752
Alignment:
Q  163 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 219  Q
    ||||||||||||| ||||| ||||| || |||||||| ||| |||||||||||||||    
T  21931696 tcaattttcagaagttatatattataatcattgagagttagcctcacccttacctta 21931752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 197; Significance: 1e-107; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 8 - 220
Target Start/End: Complemental strand, 38144748 - 38144536
Alignment:
Q  8 aatttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacattacaatagaattaacatgatcaatacccatacccctc 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  38144748 aatttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacattacaatagaattaacatgatcaatacccattcccctc 38144649  T
Q  108 ataatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctc 207  Q
    | ||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38144648 agaatcatcatcaaaccctaaccctcaatttattttccaaaattatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctc 38144549  T
Q  208 acccttaccttag 220  Q
    |||||||||||||    
T  38144548 acccttaccttag 38144536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 8 - 219
Target Start/End: Original strand, 19512229 - 19512441
Alignment:
Q  8 aatttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacattacaatagaattaacatgatcaatacccatacccctc 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||    
T  19512229 aatttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacgttacaatagaattaacatgatcaatacccattcccctc 19512328  T
Q  108 ataatcatcatcaaaccctaaccctcaatttatcttcc-aaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtct 206  Q
    | |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19512329 aaaatcatcatcaaaccctaaccctcaatttatcttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtct 19512428  T
Q  207 cacccttacctta 219  Q
    |||||||||||||    
T  19512429 cacccttacctta 19512441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 8 - 219
Target Start/End: Complemental strand, 28370266 - 28370055
Alignment:
Q  8 aatttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacattacaatagaattaacatgatcaatacccatacccctc 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| ||||||    
T  28370266 aatttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacgttacaacagaattaacatgatcaatacccattcccctc 28370167  T
Q  108 ataatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctc 207  Q
    | ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28370166 aaaatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctc 28370067  T
Q  208 acccttacctta 219  Q
    ||||||||||||    
T  28370066 acccttacctta 28370055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 3 - 220
Target Start/End: Original strand, 22750979 - 22751197
Alignment:
Q  3 tcataaatttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacattacaatagaattaacatgatcaatacccatac 102  Q
    |||||| |||||||||||||||||||||| || ||  | |||||||||||||||||| ||||||| ||||||| |||||||||||||||| |||||||      
T  22750979 tcataattttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagagaattaacatgatcattacccattt 22751078  T
Q  103 ccct-cataatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagat 201  Q
    |||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||     
T  22751079 cccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagaa 22751178  T
Q  202 agtctcacccttaccttag 220  Q
    |||||||||||||||||||    
T  22751179 agtctcacccttaccttag 22751197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 110 - 220
Target Start/End: Original strand, 23528577 - 23528686
Alignment:
Q  110 aatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcac 209  Q
    ||||||||||||||||||||  |||  |||| |||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  23528577 aatcatcatcaaaccctaactttcatcttattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcac 23528675  T
Q  210 ccttaccttag 220  Q
    |||||||||||    
T  23528676 ccttaccttag 23528686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 165 - 270
Target Start/End: Original strand, 19236900 - 19237005
Alignment:
Q  165 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtagagacaaaaagcacagcaaatccgttcctaagttctt 264  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||||||| | ||||||||||||||||||||| ||||||||||||||    
T  19236900 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaaaagcacagcaaatcagttcctaagttctt 19236999  T
Q  265 ctctct 270  Q
    ||||||    
T  19237000 ctctct 19237005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 167 - 270
Target Start/End: Original strand, 22461158 - 22461261
Alignment:
Q  167 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtagagacaaaaagcacagcaaatccgttcctaagttcttct 266  Q
    ||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||||||| | |||||||| |||||||||||| |||| |||||||||||    
T  22461158 ttttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaaaggcacagcaaatcagttcttaagttcttct 22461257  T
Q  267 ctct 270  Q
    ||||    
T  22461258 ctct 22461261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 167 - 270
Target Start/End: Original strand, 22467782 - 22467885
Alignment:
Q  167 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtagagacaaaaagcacagcaaatccgttcctaagttcttct 266  Q
    ||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||||||| | |||||||| |||||||||||| |||| |||||||||||    
T  22467782 ttttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaaaggcacagcaaatcagttcttaagttcttct 22467881  T
Q  267 ctct 270  Q
    ||||    
T  22467882 ctct 22467885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 155 - 219
Target Start/End: Complemental strand, 18408008 - 18407944
Alignment:
Q  155 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 219  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  18408008 caattagatcaattttcagaaattatatattatgattattgagagatagtctcacccttacctta 18407944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 164 - 221
Target Start/End: Complemental strand, 22438803 - 22438746
Alignment:
Q  164 caattttcagaaattatagattatgattattgagagatagtctcacccttaccttaga 221  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  22438803 caattttcagaaattatacattatgattattgagagatagtctcacccttaccttaga 22438746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 155 - 219
Target Start/End: Complemental strand, 23111264 - 23111200
Alignment:
Q  155 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 219  Q
    ||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  23111264 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 23111200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 165 - 270
Target Start/End: Original strand, 20781744 - 20781847
Alignment:
Q  165 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtagagacaaaaagcacagcaaatccgttcctaagttctt 264  Q
    ||||||||||||| ||| ||||| |||||||| ||||| || ||||||||||||||||||| | ||  | |||| ||||||||||  |||||||| ||||    
T  20781744 aattttcagaaatcatatattataattattgaaagataatcccacccttaccttagaattgcaaag--ataaagtacagcaaatcaattcctaagctctt 20781841  T
Q  265 ctctct 270  Q
    ||||||    
T  20781842 ctctct 20781847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 165 - 270
Target Start/End: Original strand, 20772969 - 20773072
Alignment:
Q  165 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtagagacaaaaagcacagcaaatccgttcctaagttctt 264  Q
    ||||||||||||| ||| ||||| | |||||| ||||| || ||||||||||||||||||| | ||  | |||| ||||||||||  |||||||| ||||    
T  20772969 aattttcagaaatcatatattataactattgaaagataatcccacccttaccttagaattgcaaag--ataaagtacagcaaatcaattcctaagctctt 20773066  T
Q  265 ctctct 270  Q
    ||||||    
T  20773067 ctctct 20773072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 165 - 270
Target Start/End: Complemental strand, 28909344 - 28909240
Alignment:
Q  165 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtagagacaaaaagcacagcaaatccgttcctaagttctt 264  Q
    ||||||||||||| ||| | ||| | |||||| ||||  || ||||||||||||||||||| |  ||||||| ||||||||||||  |||||| ||||||    
T  28909344 aattttcagaaatcatataatatcactattgaaagatgatcccacccttaccttagaattgcaacgacaaaa-gcacagcaaatcaattcctaggttctt 28909246  T
Q  265 ctctct 270  Q
    ||||||    
T  28909245 ctctct 28909240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 165 - 270
Target Start/End: Complemental strand, 28945739 - 28945635
Alignment:
Q  165 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtagagacaaaaagcacagcaaatccgttcctaagttctt 264  Q
    ||||||||||||| ||| | ||| | |||||| ||||  || ||||||||||||||||||| |  ||||||| ||||||||||||  |||||| ||||||    
T  28945739 aattttcagaaatcatataatatcactattgaaagatgatcccacccttaccttagaattgcaacgacaaaa-gcacagcaaatcaattcctaggttctt 28945641  T
Q  265 ctctct 270  Q
    ||||||    
T  28945640 ctctct 28945635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 110 - 225
Target Start/End: Original strand, 34830029 - 34830144
Alignment:
Q  110 aatcatcatcaaaccctaaccctcaattt-atcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctca 208  Q
    ||||| ||||| |||||||  |||||||| |||||| | |||||| | ||||| |  |||||||||||||||| ||||  |||||||| ||||| || ||    
T  34830029 aatcagcatcataccctaattctcaattttatcttcaagaactattctattagattgattttcagaaattatacattaa-attattgaaagataatccca 34830127  T
Q  209 cccttaccttagaattg 225  Q
    |||||||||||||||||    
T  34830128 cccttaccttagaattg 34830144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 165 - 270
Target Start/End: Complemental strand, 28896096 - 28895992
Alignment:
Q  165 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtagagacaaaaagcacagcaaatccgttcctaagttctt 264  Q
    ||||||||||||| ||| | ||| | |||||| ||||  || ||||||||||||||||||| |  | | ||||||||||||||||  |||||| ||||||    
T  28896096 aattttcagaaatcatataatatcactattgaaagatgatcccacccttaccttagaattgcaacggc-aaaagcacagcaaatcaattcctaggttctt 28895998  T
Q  265 ctctct 270  Q
    ||||||    
T  28895997 ctctct 28895992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 165 - 270
Target Start/End: Complemental strand, 28924922 - 28924818
Alignment:
Q  165 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtagagacaaaaagcacagcaaatccgttcctaagttctt 264  Q
    ||||||||||||| ||| | ||| | |||||| ||||  || ||||||||||||||||||| |  | | ||||||||||||||||  |||||| ||||||    
T  28924922 aattttcagaaatcatataatatcactattgaaagatgatcccacccttaccttagaattgcaacggc-aaaagcacagcaaatcaattcctaggttctt 28924824  T
Q  265 ctctct 270  Q
    ||||||    
T  28924823 ctctct 28924818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 221
Target Start/End: Complemental strand, 17021942 - 17021912
Alignment:
Q  191 tattgagagatagtctcacccttaccttaga 221  Q
    |||||||||||||||||||||||||||||||    
T  17021942 tattgagagatagtctcacccttaccttaga 17021912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 221
Target Start/End: Complemental strand, 21663177 - 21663141
Alignment:
Q  185 tatgattattgagagatagtctcacccttaccttaga 221  Q
    ||||||||||||||| ||| |||||||||||||||||    
T  21663177 tatgattattgagagttagcctcacccttaccttaga 21663141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 221
Target Start/End: Complemental strand, 22356938 - 22356902
Alignment:
Q  185 tatgattattgagagatagtctcacccttaccttaga 221  Q
    ||||||||||||||| ||| |||||||||||||||||    
T  22356938 tatgattattgagagttagcctcacccttaccttaga 22356902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 192; Significance: 1e-104; HSPs: 18)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 8 - 219
Target Start/End: Original strand, 6483561 - 6483772
Alignment:
Q  8 aatttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacattacaatagaattaacatgatcaatacccatacccctc 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| ||||||    
T  6483561 aatttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacgttacaacagaattaacatgatcaatacccattcccctc 6483660  T
Q  108 ataatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctc 207  Q
    | ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6483661 aaaatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctc 6483760  T
Q  208 acccttacctta 219  Q
    ||||||||||||    
T  6483761 acccttacctta 6483772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 8 - 219
Target Start/End: Original strand, 6487028 - 6487239
Alignment:
Q  8 aatttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacattacaatagaattaacatgatcaatacccatacccctc 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| ||||||    
T  6487028 aatttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacgttacaacagaattaacatgatcaatacccattcccctc 6487127  T
Q  108 ataatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctc 207  Q
    | ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6487128 aaaatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctc 6487227  T
Q  208 acccttacctta 219  Q
    ||||||||||||    
T  6487228 acccttacctta 6487239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 8 - 219
Target Start/End: Complemental strand, 19661665 - 19661454
Alignment:
Q  8 aatttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacattacaatagaattaacatgatcaatacccatacccctc 107  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||    
T  19661665 aatttcaatcaatttatgatcacaacaacaatatagattaagttttcattctaaacattacattacaacagaattaacatgatcaatacccattcccctc 19661566  T
Q  108 ataatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctc 207  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||    
T  19661565 agaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagaaagtctc 19661466  T
Q  208 acccttacctta 219  Q
    ||||||||||||    
T  19661465 acccttacctta 19661454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 24 - 220
Target Start/End: Original strand, 26583687 - 26583882
Alignment:
Q  24 tgatcacaacaacagtatagattaagttttcattctaaacattacattacaatagaattaacatgatcaatacccatacccctcataatcatcatcaaac 123  Q
    |||||||| ||||| ||||||||| |  |||||||| ||||| || |||||| | | |||||||||||| ||||| | ||||||| |||||||||||| |    
T  26583687 tgatcacagcaacattatagattaggaattcattctgaacatcactttacaacatatttaacatgatcattaccctttcccctcagaatcatcatcaagc 26583786  T
Q  124 cctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 220  Q
    ||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26583787 cctaaccctcaatttattttccaaaactatgcaattaggtcaa-tttcagaaattatagattatgattattgagagatagtctcacccttaccttag 26583882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 10 - 219
Target Start/End: Complemental strand, 23101673 - 23101463
Alignment:
Q  10 tttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacattacaatagaattaacatgatcaatacccatacccctcat 109  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||  ||| | ||||||||| | |||||||||||||| ||||||| |||||||     
T  23101673 tttcaatcaatttatgatcacaacaacagtatagattaagatttcattccgaacgtcacattacaacataattaacatgatcattacccattcccctcag 23101574  T
Q  110 aatcatcatcaaaccctaaccctcaa-tttatcttccaaaactatgcaattaggtcaattttcagaaattatagattat-gattattgagagatagtctc 207  Q
    |||||||||||||||||||||||||| |||||| | |||   ||  ||||||||||||||||| ||||||| | |||||  |||| ||||||||||||||    
T  23101573 aatcatcatcaaaccctaaccctcaattttatcct-caaggttaaacaattaggtcaattttccgaaattacatattatctattaatgagagatagtctc 23101475  T
Q  208 acccttacctta 219  Q
    ||||||||||||    
T  23101474 acccttacctta 23101463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 10 - 217
Target Start/End: Complemental strand, 23089265 - 23089057
Alignment:
Q  10 tttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacattacaatagaattaacatgatcaatacccatacccctcat 109  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||||||  ||| | ||||||||| | |||||||||||||| ||||||| ||||| |     
T  23089265 tttcaatcaatttatgatcacagcaacagtatagattaagatttcattccgaacgtcacattacaacataattaacatgatcattacccattccccttag 23089166  T
Q  110 aatcatcatcaaaccctaaccctcaa-tttatcttccaaaactatgcaattaggtcaattttcagaaattatagattat-gattattgagagatagtctc 207  Q
    |||||||||||||||||||||||||| |||||| | |||   || |||||||||||||||||| ||||||| | |||||  |||| ||||||||||||||    
T  23089165 aatcatcatcaaaccctaaccctcaattttatcct-caaggttaagcaattaggtcaattttccgaaattaaatattatctattaatgagagatagtctc 23089067  T
Q  208 acccttacct 217  Q
    ||||||||||    
T  23089066 acccttacct 23089057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 10 - 217
Target Start/End: Original strand, 23878853 - 23879060
Alignment:
Q  10 tttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacattacaatagaattaacatgatcaata-cccatacccctca 108  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| ||||||||| | |||||||||||||| || ||||| |||||||    
T  23878853 tttcaatcaatttatgatcacaacaacagtatagattaagatttcattctgaacatcacattacaacataattaacatgatcattaccccattcccctca 23878952  T
Q  109 taatcatcatcaaaccctaaccctcaattt-atcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctc 207  Q
     |||||||| | |||||||||||||||||| ||| | |||   || |||||||||||||||||  ||||||||| || || |||| ||||||||||||||    
T  23878953 gaatcatcaac-aaccctaaccctcaatttaatcct-caaggttaagcaattaggtcaatttttcgaaattatatataattattaatgagagatagtctc 23879050  T
Q  208 acccttacct 217  Q
    ||||||||||    
T  23879051 acccttacct 23879060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 148 - 270
Target Start/End: Original strand, 26885166 - 26885287
Alignment:
Q  148 aactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtagagacaaaaagcacagcaaa 247  Q
    |||||| | ||||| | ||||||||||||||||| |||| ||||||||| ||||| || ||||||||||||||||||| |||||||||||||||| ||||    
T  26885166 aactattccattagattaattttcagaaattatacatta-gattattgaaagataatcccacccttaccttagaattgcagagacaaaaagcacatcaaa 26885264  T
Q  248 tccgttcctaagttcttctctct 270  Q
    |||||||||||||||||||||||    
T  26885265 tccgttcctaagttcttctctct 26885287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 165 - 269
Target Start/End: Complemental strand, 25180984 - 25180880
Alignment:
Q  165 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtagagacaaaaagcacagcaaatccgttcctaagttctt 264  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||||||| | ||||||||||||||||||||| ||||||||||||||    
T  25180984 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaaaagcacagcaaatcagttcctaagttctt 25180885  T
Q  265 ctctc 269  Q
    |||||    
T  25180884 ctctc 25180880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 136 - 270
Target Start/End: Complemental strand, 27207803 - 27207669
Alignment:
Q  136 tttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtagagacaaa 235  Q
    ||||||||| | |||||| |  |||| | ||||||||||||||||| ||||  || ||||| ||||| || ||||||||||||||||||| | |||||||    
T  27207803 tttatcttcaagaactattcttttagattaattttcagaaattatacattaaaatcattgaaagataatcccacccttaccttagaattgcaaagacaaa 27207704  T
Q  236 aagcacagcaaatccgttcctaagttcttctctct 270  Q
    |||||||||||||||||||||||||||||||||||    
T  27207703 aagcacagcaaatccgttcctaagttcttctctct 27207669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 165 - 267
Target Start/End: Original strand, 10577 - 10679
Alignment:
Q  165 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtagagacaaaaagcacagcaaatccgttcctaagttctt 264  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||||||  | ||||||||||||||||||||| |||||||||| |||    
T  10577 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaatttcaaagacaaaaagcacagcaaatcagttcctaagtcctt 10676  T
Q  265 ctc 267  Q
    |||    
T  10677 ctc 10679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 110 - 225
Target Start/End: Complemental strand, 5706133 - 5706018
Alignment:
Q  110 aatcatcatcaaaccctaaccctca-atttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctca 208  Q
    |||||||||||||||||||   ||| |||  | ||| |||||||| |||||||||||| |||||| |||||||||||||||||| |||||||||||||||    
T  5706133 aatcatcatcaaaccctaattttcatattatttttcaaaaactattcaattaggtcaa-tttcaggaattatagattatgattaatgagagatagtctca 5706035  T
Q  209 cccttaccttagaattg 225  Q
    |||||||||||||||||    
T  5706034 cccttaccttagaattg 5706018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 167 - 270
Target Start/End: Complemental strand, 23168351 - 23168249
Alignment:
Q  167 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtagagacaaaaagcacagcaaatccgttcctaagttcttct 266  Q
    ||||||||||||||| |||||||| | ||| ||||| || ||||||||||||||||||| ||| || |||||||||||||| |||| |||||||||||||    
T  23168351 ttttcagaaattatacattatgatcaatgaaagataatcccacccttaccttagaattgcagaaac-aaaagcacagcaaaaccgtccctaagttcttct 23168253  T
Q  267 ctct 270  Q
    ||||    
T  23168252 ctct 23168249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 167 - 270
Target Start/End: Complemental strand, 23579608 - 23579506
Alignment:
Q  167 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtagagacaaaaagcacagcaaatccgttcctaagttcttct 266  Q
    ||||||||||||||| |||||||| | ||| ||||| || ||||||||||||||||||| ||| || |||||||||||||| |||| |||||||||||||    
T  23579608 ttttcagaaattatacattatgatcaatgaaagataatcccacccttaccttagaattgcagaaac-aaaagcacagcaaaaccgtccctaagttcttct 23579510  T
Q  267 ctct 270  Q
    ||||    
T  23579509 ctct 23579506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 155 - 219
Target Start/End: Original strand, 23265133 - 23265197
Alignment:
Q  155 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 219  Q
    ||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  23265133 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 23265197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 155 - 219
Target Start/End: Original strand, 23280201 - 23280265
Alignment:
Q  155 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 219  Q
    ||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  23280201 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 23280265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 158 - 219
Target Start/End: Original strand, 21908353 - 21908414
Alignment:
Q  158 ttaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 219  Q
    |||| ||||||||||||||||||| || ||||||||||||||||||||||||||||||||||    
T  21908353 ttagatcaattttcagaaattatatatcatgattattgagagatagtctcacccttacctta 21908414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 163 - 219
Target Start/End: Original strand, 24661576 - 24661632
Alignment:
Q  163 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 219  Q
    ||||||||||||||||||| |||||||| || ||||| ||| |||||||||||||||    
T  24661576 tcaattttcagaaattatatattatgatcatcgagagttagcctcacccttacctta 24661632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 190; Significance: 1e-103; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 8 - 220
Target Start/End: Original strand, 14422827 - 14423040
Alignment:
Q  8 aatttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacattacaatagaattaacatgatcaatacccatacccctc 107  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||    
T  14422827 aatttcaatcaatttatgatcacaacaacaatatagattaagttttcattctaaacattacattacaacagaattaacatgatcaatacccattcccctc 14422926  T
Q  108 ataatcatcatcaaaccctaaccctcaatttatcttcc-aaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtct 206  Q
    | |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14422927 agaatcatcatcaaaccctaaccctcaatttatcttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtct 14423026  T
Q  207 cacccttaccttag 220  Q
    ||||||||||||||    
T  14423027 cacccttaccttag 14423040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 8 - 219
Target Start/End: Original strand, 16009420 - 16009631
Alignment:
Q  8 aatttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacattacaatagaattaacatgatcaatacccatacccctc 107  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||    
T  16009420 aatttcaatcagtttatgatcacaacaacagtatagattaagttttcattctaaacattacattacaacagaattaacatgatcaatacccattcccctc 16009519  T
Q  108 ataatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctc 207  Q
    | ||||||||||||||| |||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16009520 agaatcatcatcaaaccttaacccacaatttatcttccaaaaccatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctc 16009619  T
Q  208 acccttacctta 219  Q
    ||||||||||||    
T  16009620 acccttacctta 16009631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 3 - 215
Target Start/End: Complemental strand, 10896008 - 10895795
Alignment:
Q  3 tcataaatttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacattacaatagaattaacatgatcaatacccatac 102  Q
    |||||| |||||||||||||||||||||| || ||  | |||||||||||||||||| ||||||| ||||||| |||||||||||||||||||||||| |    
T  10896008 tcataattttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagagaattaacatgatcaatacccattc 10895909  T
Q  103 ccctcataatcatcatcaaaccctaaccctcaatttatcttcc-aaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagat 201  Q
    |||||| |||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  10895908 ccctcagaatcatcatcaaaccctaacccacaatttatcttccaaaaactatgcaattaggtcaattttcaaaaattatagattatgattattgagagat 10895809  T
Q  202 agtctcacccttac 215  Q
    ||||||||||||||    
T  10895808 agtctcacccttac 10895795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 3 - 219
Target Start/End: Original strand, 15168013 - 15168230
Alignment:
Q  3 tcataaatttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacattacaatagaattaacatgatcaatacccatac 102  Q
    |||||| |||||||||||||||||||||| || ||  | |||||||||||||||||| ||||||| ||||||| |||||||||||||||| |||||||      
T  15168013 tcataattttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagagaattaacatgatcattacccattt 15168112  T
Q  103 ccct-cataatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagat 201  Q
    |||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  15168113 cccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagat 15168212  T
Q  202 agtctcacccttacctta 219  Q
    ||||||||||||||||||    
T  15168213 agtctcacccttacctta 15168230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 3 - 220
Target Start/End: Original strand, 18873198 - 18873416
Alignment:
Q  3 tcataaatttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacattacaatagaattaacatgatcaatacccatac 102  Q
    |||||| |||||||||||||||||||||| || ||  | |||||||||||||||||| ||||||| ||||||| |||||||||||||||| |||||||      
T  18873198 tcataattttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagagaattaacatgatcattacccattt 18873297  T
Q  103 ccct-cataatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagat 201  Q
    |||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||     
T  18873298 cccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagaa 18873397  T
Q  202 agtctcacccttaccttag 220  Q
    |||||||||||||||||||    
T  18873398 agtctcacccttaccttag 18873416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 8 - 220
Target Start/End: Original strand, 13743552 - 13743764
Alignment:
Q  8 aatttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacattacaatagaattaacatgatcaatacccatacccct- 106  Q
    |||||||| ||||||||||||||| ||| |  ||||||||||| |||| ||| ||||  | | ||||| | |||||||||||||| |||||||  | ||     
T  13743552 aatttcaaccaatttatgatcacagcaataacatagattaagtcttcaatctgaacagcataatacaagaaaattaacatgatcattacccatttctctt 13743651  T
Q  107 cataatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtct 206  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||| ||||||| ||||||||||||||||||||||||    
T  13743652 cataatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaa-tttcaggaattataaattatgattattgagagatagtct 13743750  T
Q  207 cacccttaccttag 220  Q
    ||||||||||||||    
T  13743751 cacccttaccttag 13743764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 42 - 220
Target Start/End: Complemental strand, 12710022 - 12709843
Alignment:
Q  42 agattaagttttcattctaaacattacattacaa-tagaattaacatgatcaatacccatacccct-cataatcatcatcaaaccctaaccctcaattta 139  Q
    |||||||||||  ||||| ||||||| ||||||| ||||||||||||||||| |||||||  | || |||||||||||||||||||||||||||||||||    
T  12710022 agattaagtttatattctgaacattatattacaaatagaattaacatgatcattacccatttctcttcataatcatcatcaaaccctaaccctcaattta 12709923  T
Q  140 tcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 220  Q
    | ||||||||||||||||||||||||| |||||| ||||||| ||||||||||||||||||||||||||||||||||||||    
T  12709922 ttttccaaaactatgcaattaggtcaa-tttcaggaattataaattatgattattgagagatagtctcacccttaccttag 12709843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 42 - 220
Target Start/End: Complemental strand, 13123093 - 13122914
Alignment:
Q  42 agattaagttttcattctaaacattacattacaa-tagaattaacatgatcaatacccatacccct-cataatcatcatcaaaccctaaccctcaattta 139  Q
    |||||||||||  ||||| ||||||| ||||||| ||||||||||||||||| |||||||  | || |||||||||||||||||||||||||||||||||    
T  13123093 agattaagtttatattctgaacattatattacaaatagaattaacatgatcattacccatttctcttcataatcatcatcaaaccctaaccctcaattta 13122994  T
Q  140 tcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 220  Q
    | ||||||||||||||||||||||||| |||||| ||||||| ||||||||||||||||||||||||||||||||||||||    
T  13122993 ttttccaaaactatgcaattaggtcaa-tttcaggaattataaattatgattattgagagatagtctcacccttaccttag 13122914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 24 - 217
Target Start/End: Original strand, 16677152 - 16677348
Alignment:
Q  24 tgatcacaacaacagtatagattaagttttcattctaaacattacattacaatagaattaacatgatcaatac-ccatacccctcataatcatcatcaaa 122  Q
    |||||||| ||||| ||||||||| |  |||||||| ||||| || |||||| | | |||||||||||| ||| |||| | ||||| |||||||||||||    
T  16677152 tgatcacagcaacattatagattaggaattcattctgaacatcactttacaacatatttaacatgatcattacaccatcctcctcaaaatcatcatcaaa 16677251  T
Q  123 ccctaaccctcaattt-atcttccaaaa-ctatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacct 217  Q
    |||||||||| ||||| ||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  16677252 ccctaacccttaattttatcttccaaaaactatgcaattaggtcaatttttagaaattatagattatgattattgagagatagtctcacccttacct 16677348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 24 - 217
Target Start/End: Original strand, 17651388 - 17651584
Alignment:
Q  24 tgatcacaacaacagtatagattaagttttcattctaaacattacattacaatagaattaacatgatcaatac-ccatacccctcataatcatcatcaaa 122  Q
    |||||||| ||||| ||||||||| |  |||||||| ||||| || |||||| | | |||||||||||| ||| |||| | ||||| |||||||||||||    
T  17651388 tgatcacagcaacattatagattaggaattcattctgaacatcactttacaacatatttaacatgatcattacaccatcctcctcaaaatcatcatcaaa 17651487  T
Q  123 ccctaaccctcaattt-atcttccaaaa-ctatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacct 217  Q
    |||||||||| ||||| ||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  17651488 ccctaacccttaattttatcttccaaaaactatgcaattaggtcaatttttagaaattatagattatgattattgagagatagtctcacccttacct 17651584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 11 - 220
Target Start/End: Complemental strand, 12590851 - 12590643
Alignment:
Q  11 ttcaatcaatttatg-atcacaacaacagtatagattaagttttcattctaaacattacattacaatagaattaacatgatcaatacccatacccctcat 109  Q
    ||||||||||| ||| || ||| |||||  || ||||||| ||||||||| ||||||| ||| ||| | || |||||| |||  ||| ||| ||  |||     
T  12590851 ttcaatcaattaatggattacagcaacaacatggattaagctttcattcttaacattaaattccaagaaaactaacatcatctttactcattcca-tcag 12590753  T
Q  110 aatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcac 209  Q
    ||||||||||||||||||||  |||  |||| |||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  12590752 aatcatcatcaaaccctaactttcatattattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcac 12590654  T
Q  210 ccttaccttag 220  Q
    |||||||||||    
T  12590653 ccttaccttag 12590643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 110 - 220
Target Start/End: Original strand, 13007378 - 13007487
Alignment:
Q  110 aatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcac 209  Q
    ||||||||||||||||||||  |||  |||| |||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  13007378 aatcatcatcaaaccctaactttcatcttattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcac 13007476  T
Q  210 ccttaccttag 220  Q
    |||||||||||    
T  13007477 ccttaccttag 13007487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 165 - 270
Target Start/End: Original strand, 2971254 - 2971359
Alignment:
Q  165 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtagagacaaaaagcacagcaaatccgttcctaagttctt 264  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||||||| | ||||||||||||||||||||| ||||||||||||||    
T  2971254 aattttcagaaattataaattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaaaagcacagcaaatcagttcctaagttctt 2971353  T
Q  265 ctctct 270  Q
    ||||||    
T  2971354 ctctct 2971359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 136 - 270
Target Start/End: Complemental strand, 14319713 - 14319579
Alignment:
Q  136 tttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtagagacaaa 235  Q
    ||||||||| | |||||| |  |||| | ||||||||||||||||| ||||  || ||||| ||||| || ||||||||||||||||||| | |||||||    
T  14319713 tttatcttcaagaactattcttttagattaattttcagaaattatacattaaaatcattgaaagataatcccacccttaccttagaattgcaaagacaaa 14319614  T
Q  236 aagcacagcaaatccgttcctaagttcttctctct 270  Q
    |||||||||||||||||||||||||||||||||||    
T  14319613 aagcacagcaaatccgttcctaagttcttctctct 14319579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 164 - 270
Target Start/End: Original strand, 14567203 - 14567309
Alignment:
Q  164 caattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtagagacaaaaagcacagcaaatccgttcctaagttct 263  Q
    |||||||||||||  ||| ||||| || |||||  | ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14567203 caattttcagaaaccatatattataatcattgaaggttagcctcacccttaccttagaattgtagagacaaaaagcacagcaaatccgttcctaagttct 14567302  T
Q  264 tctctct 270  Q
    |||||||    
T  14567303 tctctct 14567309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 165 - 270
Target Start/End: Complemental strand, 20906516 - 20906411
Alignment:
Q  165 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtagagacaaaaagcacagcaaatccgttcctaagttctt 264  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||||||| |  |||||| ||| ||||||||||||||||||||||||    
T  20906516 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaggacaaatagctcagcaaatccgttcctaagttctt 20906417  T
Q  265 ctctct 270  Q
    ||||||    
T  20906416 ctctct 20906411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 165 - 270
Target Start/End: Complemental strand, 29181164 - 29181058
Alignment:
Q  165 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtagagacaaaaagcacagc-aaatccgttcctaagttct 263  Q
    ||||||||||||||| | ||||||| |||||| ||||| || ||||||||||||||||||| | ||||||| |||||||| ||||| |||||||||||||    
T  29181164 aattttcagaaattacatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaatagcacagcaaaatcagttcctaagttct 29181065  T
Q  264 tctctct 270  Q
    |||||||    
T  29181064 tctctct 29181058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 168 - 270
Target Start/End: Original strand, 16091078 - 16091181
Alignment:
Q  168 tttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtagagacaaaaagcacagc-aaatccgttcctaagttcttct 266  Q
    |||||||||||| | ||||||| |||||| ||||| || ||||||||||||||||||| | ||||||| |||||||| ||||| ||||||||||||||||    
T  16091078 tttcagaaattacatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaatagcacagcaaaatcagttcctaagttcttct 16091177  T
Q  267 ctct 270  Q
    ||||    
T  16091178 ctct 16091181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 136 - 270
Target Start/End: Original strand, 14230752 - 14230886
Alignment:
Q  136 tttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtagagacaaa 235  Q
    ||||||||| | |||||| |  |||| | ||||||||||||||||| ||||   | ||||| ||||| || ||||||||||||||||||| | |||||||    
T  14230752 tttatcttcaagaactattcttttagattaattttcagaaattatacattaaattcattgaaagataatcccacccttaccttagaattgcaaagacaaa 14230851  T
Q  236 aagcacagcaaatccgttcctaagttcttctctct 270  Q
    ||||||  |||||||||||||||||||| ||||||    
T  14230852 aagcacgacaaatccgttcctaagttctcctctct 14230886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 164 - 219
Target Start/End: Complemental strand, 11382926 - 11382871
Alignment:
Q  164 caattttcagaaattatagattatgattattgagagatagtctcacccttacctta 219  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  11382926 caattttcagaaattatatattatgattattgagagatagtctcacccttacctta 11382871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 164 - 219
Target Start/End: Complemental strand, 11389403 - 11389348
Alignment:
Q  164 caattttcagaaattatagattatgattattgagagatagtctcacccttacctta 219  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  11389403 caattttcagaaattatatattatgattattgagagatagtctcacccttacctta 11389348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 164 - 221
Target Start/End: Complemental strand, 20311107 - 20311050
Alignment:
Q  164 caattttcagaaattatagattatgattattgagagatagtctcacccttaccttaga 221  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  20311107 caattttcagaaattatacgttatgattattgagagatagtctcacccttaccttaga 20311050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 164 - 221
Target Start/End: Complemental strand, 21231015 - 21230958
Alignment:
Q  164 caattttcagaaattatagattatgattattgagagatagtctcacccttaccttaga 221  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||||||||||||    
T  21231015 caattttcagaaattatatactatgattattgagagatagtctcacccttaccttaga 21230958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 156 - 219
Target Start/End: Original strand, 13679485 - 13679548
Alignment:
Q  156 aattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 219  Q
    |||||| |||||||||| |||||||| || ||||| ||||| ||||||||||||||||||||||    
T  13679485 aattagatcaattttcaaaaattatatatcatgatcattgaaagatagtctcacccttacctta 13679548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 167 - 235
Target Start/End: Original strand, 31155396 - 31155464
Alignment:
Q  167 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtagagacaaa 235  Q
    ||||||||||||||| ||||| || ||||| ||||| || ||||||||||||||||||| | |||||||    
T  31155396 ttttcagaaattatatattataatcattgaaagataatcccacccttaccttagaattgcaaagacaaa 31155464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 219
Target Start/End: Original strand, 11311059 - 11311113
Alignment:
Q  165 aattttcagaaattatagattatgattattgagagatagtctcacccttacctta 219  Q
    |||||| ||||||| || | ||| |||||||||||||||||||||||||||||||    
T  11311059 aatttttagaaattctacactattattattgagagatagtctcacccttacctta 11311113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 163 - 219
Target Start/End: Original strand, 46625961 - 46626017
Alignment:
Q  163 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 219  Q
    ||||||||| ||||||||| ||||| || |||||||| |||||||||||||| ||||    
T  46625961 tcaattttccgaaattatatattataatcattgagagttagtctcacccttatctta 46626017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 220
Target Start/End: Complemental strand, 831669 - 831633
Alignment:
Q  184 ttatgattattgagagatagtctcacccttaccttag 220  Q
    |||| ||||||||||| ||||||||||||||||||||    
T  831669 ttataattattgagagttagtctcacccttaccttag 831633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 220
Target Start/End: Complemental strand, 1196849 - 1196813
Alignment:
Q  184 ttatgattattgagagatagtctcacccttaccttag 220  Q
    |||| ||||||||||| ||||||||||||||||||||    
T  1196849 ttataattattgagagttagtctcacccttaccttag 1196813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 225
Target Start/End: Original strand, 2465361 - 2465421
Alignment:
Q  165 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattg 225  Q
    ||||||||||||| ||| ||||| ||||||||  |||  || |||||||||||||||||||    
T  2465361 aattttcagaaatcatatattatcattattgaaggatgatcccacccttaccttagaattg 2465421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 225
Target Start/End: Complemental strand, 3857419 - 3857360
Alignment:
Q  165 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattg 225  Q
    ||||||||||||| ||| ||||| |||||||| ||||  || |||||||||||||||||||    
T  3857419 aattttcagaaatcatatattatcattattga-agatgatcccacccttaccttagaattg 3857360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 34958578 - 34958614
Alignment:
Q  184 ttatgattattgagagatagtctcacccttaccttag 220  Q
    |||| ||||||||||| ||||||||||||||||||||    
T  34958578 ttataattattgagagttagtctcacccttaccttag 34958614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 187; Significance: 1e-101; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 8 - 225
Target Start/End: Complemental strand, 10986393 - 10986175
Alignment:
Q  8 aatttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacattacaatagaattaacatgatcaatacccatacccctc 107  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||| ||||||    
T  10986393 aatttcaatcaatttatgatcacaacaacagtatagattaagttttcattctgaacattacattacaacagaattaacatgatcaatacccattcccctc 10986294  T
Q  108 ataatcatcatcaaaccctaaccctcaatttatcttcc-aaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtct 206  Q
    | |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  10986293 agaatcatcatcaaaccctaaccctcaatttatcttccaaaaactatgcaattaggtcaatttttagaaattatagattatgattattgaaagatagtct 10986194  T
Q  207 cacccttaccttagaattg 225  Q
    |||||||||||||||||||    
T  10986193 cacccttaccttagaattg 10986175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 8 - 219
Target Start/End: Original strand, 23839041 - 23839253
Alignment:
Q  8 aatttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacattacaatagaattaacatgatcaatacccatacccctc 107  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||| |||||     
T  23839041 aatttcaatcaatttatgatcacaacaacagtatagattaagttttcattctgaacattacattacaacagaattaacatgatcaatacccattcccctt 23839140  T
Q  108 ataatcatcatcaaaccctaaccctcaatttatcttccaaa-actatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtct 206  Q
    | ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23839141 agaatcatcatcaaaccctaaccctcaatttatcttccaaacactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtct 23839240  T
Q  207 cacccttacctta 219  Q
    |||||||||||||    
T  23839241 cacccttacctta 23839253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 181; E-Value: 7e-98
Query Start/End: Original strand, 8 - 219
Target Start/End: Original strand, 4477700 - 4477912
Alignment:
Q  8 aatttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacattacaatagaattaacatgatcaatacccatacccctc 107  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||| ||||||    
T  4477700 aatttcaatcaatttatgatcacaacaacaatatagattaagttttcattctaaacattacattacaacagaattagcatgatcaatacccattcccctc 4477799  T
Q  108 ataatcatcatcaaaccctaaccctcaatttatcttcc-aaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtct 206  Q
    | |||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4477800 agaatcatcatcaaaccctaacccacaatttatcttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtct 4477899  T
Q  207 cacccttacctta 219  Q
    |||||||||||||    
T  4477900 cacccttacctta 4477912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 3 - 219
Target Start/End: Original strand, 23057776 - 23057993
Alignment:
Q  3 tcataaatttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacattacaatagaattaacatgatcaatacccatac 102  Q
    |||||| |||||||||||||||||||||| || ||  | |||||||||||||||||| ||||||| ||||||| |||||||||||||||| |||||||      
T  23057776 tcataattttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagagaattaacatgatcattacccattt 23057875  T
Q  103 ccct-cataatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagat 201  Q
    |||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  23057876 cccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcaggaattatagattatgattatcgagagat 23057975  T
Q  202 agtctcacccttacctta 219  Q
    ||||||||||||||||||    
T  23057976 agtctcacccttacctta 23057993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 29614366 - 29614146
Alignment:
Q  1 attcataaatttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacattacaatagaattaacatgatcaatacccat 100  Q
    ||||||||||||||||||| ||||||||||| |||||  | ||||||||||||||||||||||||| || ||||| |||||||||||||||| |||||||    
T  29614366 attcataaatttcaatcaagttatgatcacagcaacaacaaagattaagttttcattctaaacatt-caatacaagagaattaacatgatcattacccat 29614268  T
Q  101 acccct-cataatcatcatcaaaccctaaccctcaatttatctt-ccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgaga 198  Q
      |||| |||||||||||||||||||||||||||||||||| || |||||| ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  29614267 ttcccttcataatcatcatcaaaccctaaccctcaatttatttttccaaaattatgcaactaggtcaattttcagaaattatagattatgattattgaga 29614168  T
Q  199 gatagtctcacccttaccttag 220  Q
    ||||||||||||||||||||||    
T  29614167 gatagtctcacccttaccttag 29614146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 10 - 220
Target Start/End: Original strand, 18800282 - 18800493
Alignment:
Q  10 tttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacattacaatagaattaacatgatcaatacccatacccctcat 109  Q
    ||||||||||||| |||||||||||||| ||||||||||| ||||||| | ||||| ||||||||| |||||||||||||||| ||| ||| |||  ||     
T  18800282 tttcaatcaatttgtgatcacaacaacaatatagattaagatttcattttgaacatcacattacaacagaattaacatgatcattactcattccctccag 18800381  T
Q  110 aatcatcatcaaaccctaaccctcaatt-tatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctca 208  Q
    |||||||||||||||||||||||||||| ||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18800382 aatcatcatcaaaccctaaccctcaattctattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctca 18800481  T
Q  209 cccttaccttag 220  Q
    ||||||| ||||    
T  18800482 cccttacattag 18800493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 86 - 220
Target Start/End: Complemental strand, 930229 - 930095
Alignment:
Q  86 atgatcaatacccatacccctcataatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagatt 185  Q
    ||||||| ||||||| ||| ||| || |||||||||||||||||||||||||||| || ||||||||| |||||||||||||||||||||| ||||||||    
T  930229 atgatcattacccattcccttcagaaacatcatcaaaccctaaccctcaatttatttttcaaaactatacaattaggtcaattttcagaaactatagatt 930130  T
Q  186 atgattattgagagatagtctcacccttaccttag 220  Q
    |||||||||||||||||||||||||||||||||||    
T  930129 atgattattgagagatagtctcacccttaccttag 930095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 10 - 217
Target Start/End: Complemental strand, 21565422 - 21565214
Alignment:
Q  10 tttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacattacaatagaattaacatgatcaatacccatacccctcat 109  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||||||  ||| | ||||||||| | |||||||||||||| ||||||| ||||| |     
T  21565422 tttcaatcaatttatgatcacagcaacagtatagattaagatttcattccgaacgtcacattacaacataattaacatgatcattacccattccccttag 21565323  T
Q  110 aatcatcatcaaaccctaaccctcaa-tttatcttccaaaactatgcaattaggtcaattttcagaaattatagattat-gattattgagagatagtctc 207  Q
    |||||||||||||||||||||||||| |||||| | |||   || |||||||||||||||||| ||||||| | |||||  |||| ||||||||||||||    
T  21565322 aatcatcatcaaaccctaaccctcaattttatcct-caaggttaagcaattaggtcaattttccgaaattaaatattatctattaatgagagatagtctc 21565224  T
Q  208 acccttacct 217  Q
    ||||||||||    
T  21565223 acccttacct 21565214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 110 - 220
Target Start/End: Original strand, 12168309 - 12168418
Alignment:
Q  110 aatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcac 209  Q
    ||||||||||||||||||||  |||  |||| |||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  12168309 aatcatcatcaaaccctaactttcatcttattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcac 12168407  T
Q  210 ccttaccttag 220  Q
    |||||||||||    
T  12168408 ccttaccttag 12168418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 110 - 220
Target Start/End: Original strand, 19287218 - 19287327
Alignment:
Q  110 aatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcac 209  Q
    ||||||||||||||||||||  |||  |||| |||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  19287218 aatcatcatcaaaccctaactttcatcttattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcac 19287316  T
Q  210 ccttaccttag 220  Q
    |||||||||||    
T  19287317 ccttaccttag 19287327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 110 - 220
Target Start/End: Complemental strand, 19785978 - 19785869
Alignment:
Q  110 aatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcac 209  Q
    ||||||||||||||||||||  ||| ||||| |||||||||||| ||| ||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  19785978 aatcatcatcaaaccctaactttcattttattttccaaaactattcaactaggtcaattt-cagaaattatagattatgattattgagagatagtctcac 19785880  T
Q  210 ccttaccttag 220  Q
    |||||||||||    
T  19785879 ccttaccttag 19785869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 110 - 220
Target Start/End: Original strand, 19878402 - 19878511
Alignment:
Q  110 aatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcac 209  Q
    ||||||||||||||||||||  |||  |||| |||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  19878402 aatcatcatcaaaccctaactttcatcttattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcac 19878500  T
Q  210 ccttaccttag 220  Q
    |||||||||||    
T  19878501 ccttaccttag 19878511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 137 - 225
Target Start/End: Complemental strand, 34640069 - 34639981
Alignment:
Q  137 ttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattg 225  Q
    |||| |||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  34640069 ttattttccaaaactattcaattaggtcaattttcagaaattatagattaagattattgagagatagtctcacccttaccttagaattg 34639981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 110 - 220
Target Start/End: Original strand, 19884178 - 19884287
Alignment:
Q  110 aatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcac 209  Q
    ||||||||||||||||||||  |||  |||| |||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  19884178 aatcatcatcaaaccctaactttcatcttattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcac 19884276  T
Q  210 ccttaccttag 220  Q
    ||| |||||||    
T  19884277 cctaaccttag 19884287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 137 - 225
Target Start/End: Complemental strand, 34646743 - 34646655
Alignment:
Q  137 ttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattg 225  Q
    |||| |||||||| ||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  34646743 ttattttccaaaattattcaattaggtcaattttcagaaattatagattaagattattgagagatagtctcacccttaccttagaattg 34646655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 114 - 221
Target Start/End: Complemental strand, 25469808 - 25469703
Alignment:
Q  114 atcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcaccctt 213  Q
    |||||||||||||||   |||  |||| ||||||||| || ||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||    
T  25469808 atcatcaaaccctaattttcatattattttccaaaaccattcaattaggtcaattt-cagaa-ttatagattatgattattgagagatagtctcaccctt 25469711  T
Q  214 accttaga 221  Q
    ||||||||    
T  25469710 accttaga 25469703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 136 - 270
Target Start/End: Original strand, 31252394 - 31252529
Alignment:
Q  136 tttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtagagacaa- 234  Q
    ||||||||| | |||||| ||||||| | ||||||||||||||||| ||||| || ||| | ||||| |||||||||||||||||||||| | ||||||     
T  31252394 tttatcttcaagaactattcaattagattaattttcagaaattatatattataatcattaaaagataatctcacccttaccttagaattgcaaagacaaa 31252493  T
Q  235 -aaagcacagcaaatccgttcctaagttcttctctct 270  Q
     ||| |||||| |||| ||||||||||||||||||||    
T  31252494 gaaaacacagc-aatcggttcctaagttcttctctct 31252529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 167 - 270
Target Start/End: Complemental strand, 20007999 - 20007897
Alignment:
Q  167 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtagagacaaaaagcacagcaaatccgttcctaagttcttct 266  Q
    |||||| |||||||| ||||||| |||||| ||||  || ||||||||||||||||||| | |||| |||||||||||||||  ||||||||||||||||    
T  20007999 ttttcataaattatatattatgactattgaaagatgatcccacccttaccttagaattgcaaagac-aaaagcacagcaaatgagttcctaagttcttct 20007901  T
Q  267 ctct 270  Q
    ||||    
T  20007900 ctct 20007897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 164 - 221
Target Start/End: Complemental strand, 24512899 - 24512842
Alignment:
Q  164 caattttcagaaattatagattatgattattgagagatagtctcacccttaccttaga 221  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||| ||||||||    
T  24512899 caattttcagaaattatatactatgattattgagagatagtctcaccctcaccttaga 24512842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 131 - 270
Target Start/End: Complemental strand, 11288758 - 11288620
Alignment:
Q  131 ctcaatttatcttccaaaactatgcaattaggtcaatttt-cagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtaga 229  Q
    |||||||||| ||| | |||||| |  |||||| |||||| ||||||||||| |||| ||| ||||| ||||| || |||||||||||||||||||   |    
T  11288758 ctcaatttattttcaagaactattcttttaggttaatttttcagaaattatatattaagatcattgaaagataatcccacccttaccttagaattgccaa 11288659  T
Q  230 gacaaaaagcacagcaaatccgttcctaagttcttctctct 270  Q
    |||||||| |||||| |||| ||||||||| ||||||||||    
T  11288658 gacaaaaa-cacagc-aatcagttcctaagctcttctctct 11288620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 192 - 270
Target Start/End: Complemental strand, 28288537 - 28288461
Alignment:
Q  192 attgagagatagtctcacccttaccttagaattgtagagacaaaaagcacagcaaatccgttcctaagttcttctctct 270  Q
    |||||||||||||||||||||||||||||||||| | ||||||||| |||||| |||| ||||||||| | ||||||||    
T  28288537 attgagagatagtctcacccttaccttagaattgcaaagacaaaaa-cacagc-aatcagttcctaagcttttctctct 28288461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 167 - 219
Target Start/End: Original strand, 9187498 - 9187550
Alignment:
Q  167 ttttcagaaattatagattatgattattgagagatagtctcacccttacctta 219  Q
    ||||||||||||||  |||| ||||||||||||||||||||||||||||||||    
T  9187498 ttttcagaaattatgtattaagattattgagagatagtctcacccttacctta 9187550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 163 - 219
Target Start/End: Original strand, 25348486 - 25348542
Alignment:
Q  163 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 219  Q
    |||||||||||||||| || | ||| |||||||||||||||||||||||||||||||    
T  25348486 tcaattttcagaaattctatactattattattgagagatagtctcacccttacctta 25348542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 163 - 217
Target Start/End: Original strand, 25598643 - 25598697
Alignment:
Q  163 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacct 217  Q
    |||||||||||||| |||| |||||||| |||||||| |||||||||||||||||    
T  25598643 tcaattttcagaaaatatatattatgatcattgagagttagtctcacccttacct 25598697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 165 - 270
Target Start/End: Complemental strand, 21364537 - 21364433
Alignment:
Q  165 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtagagacaaaaagcacagcaaatccgttcctaagttctt 264  Q
    ||||||||||||| ||| ||||| |||| |||  |||| || |||||||||||| |||||| | |||| |||||||||||||| |  |||||| ||||||    
T  21364537 aattttcagaaatcatatattatcattactgaaggataatcccacccttacctttgaattgcaaagac-aaaagcacagcaaaacaattcctaggttctt 21364439  T
Q  265 ctctct 270  Q
    ||||||    
T  21364438 ctctct 21364433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 165 - 270
Target Start/End: Complemental strand, 23968519 - 23968415
Alignment:
Q  165 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtagagacaaaaagcacagcaaatccgttcctaagttctt 264  Q
    ||||||||||||| ||| ||||| |||| |||  |||| || |||||||||||| |||||| | |||| |||||||||||||| |  |||||| ||||||    
T  23968519 aattttcagaaatcatatattatcattactgaaggataatcccacccttacctttgaattgcaaagac-aaaagcacagcaaaacaattcctaggttctt 23968421  T
Q  265 ctctct 270  Q
    ||||||    
T  23968420 ctctct 23968415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 167 - 235
Target Start/End: Original strand, 15458492 - 15458560
Alignment:
Q  167 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtagagacaaa 235  Q
    ||||||||||||||| ||||| || ||||| ||||| || ||||||||||||||||||| | |||||||    
T  15458492 ttttcagaaattatatattataatcattgaaagataatcccacccttaccttagaattgcaaagacaaa 15458560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 167 - 235
Target Start/End: Original strand, 15465087 - 15465155
Alignment:
Q  167 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtagagacaaa 235  Q
    ||||||||||||||| ||||| || ||||| ||||| || ||||||||||||||||||| | |||||||    
T  15465087 ttttcagaaattatatattataatcattgaaagataatcccacccttaccttagaattgcaaagacaaa 15465155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 163 - 219
Target Start/End: Original strand, 25397172 - 25397228
Alignment:
Q  163 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 219  Q
    ||||||||||||||||||| |||||||| || ||||| ||| |||||||||||||||    
T  25397172 tcaattttcagaaattatatattatgatcatcgagagttagcctcacccttacctta 25397228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 167 - 270
Target Start/End: Complemental strand, 9099124 - 9099023
Alignment:
Q  167 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtagagacaaaaagcacagcaaatccgttcctaagttcttct 266  Q
    ||||||||||| ||| ||||| | |||||| ||||| || ||||||||||||||||||| | ||  | ||||  |||||||||  |||||||| ||||||    
T  9099124 ttttcagaaatcatatattataactattgaaagataatcccacccttaccttagaattgcaaag--ataaagtgcagcaaatcaattcctaagctcttct 9099027  T
Q  267 ctct 270  Q
    ||||    
T  9099026 ctct 9099023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 163 - 219
Target Start/End: Complemental strand, 19471391 - 19471335
Alignment:
Q  163 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 219  Q
    ||||||| ||||||||||| |||||||| || ||||| ||| |||||||||||||||    
T  19471391 tcaatttccagaaattatatattatgatcatcgagaggtagcctcacccttacctta 19471335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 217
Target Start/End: Complemental strand, 2286823 - 2286769
Alignment:
Q  163 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacct 217  Q
    ||||||||||||| ||||| ||||  || |||||||| |||||||||||||||||    
T  2286823 tcaattttcagaagttatatattacaatcattgagagttagtctcacccttacct 2286769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 219
Target Start/End: Original strand, 18659450 - 18659484
Alignment:
Q  185 tatgattattgagagatagtctcacccttacctta 219  Q
    ||||||||||||||| |||||||||||||||||||    
T  18659450 tatgattattgagagttagtctcacccttacctta 18659484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 219
Target Start/End: Original strand, 24441673 - 24441707
Alignment:
Q  185 tatgattattgagagatagtctcacccttacctta 219  Q
    ||||||||||||||| |||||||||||||||||||    
T  24441673 tatgattattgagagttagtctcacccttacctta 24441707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 221
Target Start/End: Complemental strand, 29847314 - 29847278
Alignment:
Q  185 tatgattattgagagatagtctcacccttaccttaga 221  Q
    ||||||||||||||| ||| |||||||||||||||||    
T  29847314 tatgattattgagagttagcctcacccttaccttaga 29847278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 185; Significance: 1e-100; HSPs: 17)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 8 - 219
Target Start/End: Complemental strand, 20437236 - 20437024
Alignment:
Q  8 aatttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacattacaatagaattaacatgatcaatacccatacccctc 107  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | |||||||||||||||||||||| ||||||    
T  20437236 aatttcaatcaatttatgatcacaacaacagtatagattaagttttcattctgaacattacattacaacataattaacatgatcaatacccattcccctc 20437137  T
Q  108 ataatcatcatcaaaccctaaccctcaatttatcttcc-aaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtct 206  Q
    | |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20437136 agaatcatcatcaaaccctaaccctcaatttatcttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtct 20437037  T
Q  207 cacccttacctta 219  Q
    |||||||||||||    
T  20437036 cacccttacctta 20437024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 110 - 220
Target Start/End: Original strand, 41111981 - 41112090
Alignment:
Q  110 aatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcac 209  Q
    ||||||||||||||||||||  |||  |||| || ||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  41111981 aatcatcatcaaaccctaactttcatcttatttttcaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcac 41112079  T
Q  210 ccttaccttag 220  Q
    |||||||||||    
T  41112080 ccttaccttag 41112090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 165 - 270
Target Start/End: Complemental strand, 20851187 - 20851082
Alignment:
Q  165 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtagagacaaaaagcacagcaaatccgttcctaagttctt 264  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||||||| | ||||||||||||||||||||| ||||||||||||||    
T  20851187 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaaaagcacagcaaatcagttcctaagttctt 20851088  T
Q  265 ctctct 270  Q
    ||||||    
T  20851087 ctctct 20851082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 165 - 270
Target Start/End: Complemental strand, 20857814 - 20857709
Alignment:
Q  165 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtagagacaaaaagcacagcaaatccgttcctaagttctt 264  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||||||| | ||||||||||||||||||||| ||||||||||||||    
T  20857814 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaaaagcacagcaaatcagttcctaagttctt 20857715  T
Q  265 ctctct 270  Q
    ||||||    
T  20857714 ctctct 20857709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 165 - 270
Target Start/End: Original strand, 21706276 - 21706381
Alignment:
Q  165 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtagagacaaaaagcacagcaaatccgttcctaagttctt 264  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||||||| | ||||||||||||||||||||| ||||||||||||||    
T  21706276 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaaaagcacagcaaatcagttcctaagttctt 21706375  T
Q  265 ctctct 270  Q
    ||||||    
T  21706376 ctctct 21706381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 165 - 270
Target Start/End: Original strand, 21710818 - 21710923
Alignment:
Q  165 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtagagacaaaaagcacagcaaatccgttcctaagttctt 264  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||||||| | ||||||||||||||||||||| ||||||||||||||    
T  21710818 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaaaagcacagcaaatcagttcctaagttctt 21710917  T
Q  265 ctctct 270  Q
    ||||||    
T  21710918 ctctct 21710923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 155 - 219
Target Start/End: Original strand, 32651563 - 32651627
Alignment:
Q  155 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 219  Q
    ||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  32651563 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 32651627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 155 - 219
Target Start/End: Original strand, 18712790 - 18712854
Alignment:
Q  155 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 219  Q
    ||||||| ||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||    
T  18712790 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccatacctta 18712854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 164 - 219
Target Start/End: Complemental strand, 19663572 - 19663517
Alignment:
Q  164 caattttcagaaattatagattatgattattgagagatagtctcacccttacctta 219  Q
    |||||||||||||||||| | ||||||||| |||||||||||||||||||||||||    
T  19663572 caattttcagaaattatatactatgattatcgagagatagtctcacccttacctta 19663517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 163 - 219
Target Start/End: Original strand, 20805320 - 20805376
Alignment:
Q  163 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 219  Q
    ||||||||||||||||||| |||||||| |||||||| ||| |||||||||||||||    
T  20805320 tcaattttcagaaattatatattatgatcattgagagttagcctcacccttacctta 20805376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 164 - 219
Target Start/End: Original strand, 11158093 - 11158148
Alignment:
Q  164 caattttcagaaattatagattatgattattgagagatagtctcacccttacctta 219  Q
    |||||||||||||||||| |||| ||| |||||||| |||||||||||||||||||    
T  11158093 caattttcagaaattatatattaagatcattgagagttagtctcacccttacctta 11158148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 163 - 217
Target Start/End: Complemental strand, 10811839 - 10811785
Alignment:
Q  163 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacct 217  Q
    |||||||||||||||| || | ||| |||||||||||||||||||||||||||||    
T  10811839 tcaattttcagaaattctacactattattattgagagatagtctcacccttacct 10811785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 261
Target Start/End: Complemental strand, 20045004 - 20044910
Alignment:
Q  167 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtagagacaaaaagcacagcaaatccgttcctaagtt 261  Q
    ||||||||| ||||| |||| ||| |||||  |||| || ||||||||||||||||||||||  | ||  | ||||||||||| | |||||||||    
T  20045004 ttttcagaatttatatattaagatcattgaaggataatcccacccttaccttagaattgtaggaagaattaacacagcaaatcagctcctaagtt 20044910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 219
Target Start/End: Original strand, 24476350 - 24476380
Alignment:
Q  189 attattgagagatagtctcacccttacctta 219  Q
    |||||||||||||||||||||||||||||||    
T  24476350 attattgagagatagtctcacccttacctta 24476380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 219
Target Start/End: Complemental strand, 25091448 - 25091418
Alignment:
Q  189 attattgagagatagtctcacccttacctta 219  Q
    |||||||||||||||||||||||||||||||    
T  25091448 attattgagagatagtctcacccttacctta 25091418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 218
Target Start/End: Original strand, 18271338 - 18271371
Alignment:
Q  185 tatgattattgagagatagtctcacccttacctt 218  Q
    ||||||||||||||| ||||||||||||||||||    
T  18271338 tatgattattgagagttagtctcacccttacctt 18271371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 218
Target Start/End: Original strand, 18275992 - 18276025
Alignment:
Q  185 tatgattattgagagatagtctcacccttacctt 218  Q
    ||||||||||||||| ||||||||||||||||||    
T  18275992 tatgattattgagagttagtctcacccttacctt 18276025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 154; Significance: 1e-81; HSPs: 3)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 111717 - 111938
Alignment:
Q  1 attcataaatttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacattacaatagaattaacatgatcaatacccat 100  Q
    |||||| |||||||||||||||||||||||| || ||  | |||||||||||||||||| ||||||| ||||||| |||||||||||||||| |||||||    
T  111717 attcatcaatttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagagaattaacatgatcattacccat 111816  T
Q  101 acccct-cataatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaa-ttttcagaaattatagattatgattattgaga 198  Q
      |||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  111817 ttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaatttttcagaaattatagattatgattattgaga 111916  T
Q  199 gatagtctcacccttaccttag 220  Q
    ||||||||||||||||||||||    
T  111917 gatagtctcacccttaccttag 111938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 165 - 225
Target Start/End: Complemental strand, 91257 - 91197
Alignment:
Q  165 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattg 225  Q
    ||||||||||||| ||| ||||| |||||||| ||||  || |||||||||||||||||||    
T  91257 aattttcagaaatcatatattatcattattgaaagatgatcccacccttaccttagaattg 91197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 165 - 225
Target Start/End: Complemental strand, 96983 - 96923
Alignment:
Q  165 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattg 225  Q
    ||||||||||||| ||| ||||| |||||||| ||||  || |||||||||||||||||||    
T  96983 aattttcagaaatcatatattatcattattgaaagatgatcccacccttaccttagaattg 96923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 150; Significance: 2e-79; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 10 - 217
Target Start/End: Complemental strand, 14607 - 14398
Alignment:
Q  10 tttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacattacaatagaattaacatgatcaatacccatacccct-ca 108  Q
    ||||||||| |||||||||||| |||||| |||||||||||||||||||  ||||| ||||||||| |||||||||||||||| |||||||  |||| ||    
T  14607 tttcaatcagtttatgatcacagcaacagcatagattaagttttcattcggaacatcacattacaacagaattaacatgatcattacccatttcccttca 14508  T
Q  109 taatcatcatcaaaccctaaccctcaatttatcttccaaaa-ctatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctc 207  Q
     |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14507 gaatcatcatcaaaccctaaccctcaatttatcttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctc 14408  T
Q  208 acccttacct 217  Q
    ||||||||||    
T  14407 acccttacct 14398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1773 (Bit Score: 147; Significance: 1e-77; HSPs: 1)
Name: scaffold1773
Description:

Target: scaffold1773; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 3 - 220
Target Start/End: Original strand, 1017 - 1233
Alignment:
Q  3 tcataaatttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacattacaatagaattaacatgatcaatacccatac 102  Q
    ||||||||||||||||||||||||||||| |||||  | |||||||||||||||||| ||||||| ||||||| |||||||||||||||| |||||||      
T  1017 tcataaatttcaatcaatttatgatcacagcaacaaca-agattaagttttcattctgaacattatattacaagagaattaacatgatcattacccattt 1115  T
Q  103 ccct-cataatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagat 201  Q
    |||| ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||    
T  1116 cccttcataatcctcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaa-tttcaggaattatagattatgattattgagagat 1214  T
Q  202 agtctcacccttaccttag 220  Q
    |||||||||||||||||||    
T  1215 agtctcacccttaccttag 1233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 147; Significance: 1e-77; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 3 - 220
Target Start/End: Original strand, 50018 - 50234
Alignment:
Q  3 tcataaatttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacattacaatagaattaacatgatcaatacccatac 102  Q
    ||||||||||||||||||||||||||||| |||||  | |||||||||||||||||| ||||||| ||||||| |||||||||||||||| |||||||      
T  50018 tcataaatttcaatcaatttatgatcacagcaacaaca-agattaagttttcattctgaacattatattacaagagaattaacatgatcattacccattt 50116  T
Q  103 ccct-cataatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagat 201  Q
    |||| ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||    
T  50117 cccttcataatcctcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaa-tttcaggaattatagattatgattattgagagat 50215  T
Q  202 agtctcacccttaccttag 220  Q
    |||||||||||||||||||    
T  50216 agtctcacccttaccttag 50234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 140; Significance: 2e-73; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 10 - 220
Target Start/End: Original strand, 11186 - 11397
Alignment:
Q  10 tttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacattacaatagaattaacatgatcaatacccatacccctcat 109  Q
    ||||||||||||| |||||||| ||||||||| ||||||| ||||||| | ||||| ||||||||| |||||||||||||||| ||| ||| |||  ||     
T  11186 tttcaatcaatttgtgatcacagcaacagtatggattaagatttcattttgaacatcacattacaacagaattaacatgatcattactcattccctccag 11285  T
Q  110 aatcatcatcaaaccctaaccctcaatt-tatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctca 208  Q
    |||||||||||||||||||||||||||| ||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11286 aatcatcatcaaaccctaaccctcaattctattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctca 11385  T
Q  209 cccttaccttag 220  Q
    ||||||||||||    
T  11386 cccttaccttag 11397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0924 (Bit Score: 132; Significance: 1e-68; HSPs: 1)
Name: scaffold0924
Description:

Target: scaffold0924; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 3 - 220
Target Start/End: Complemental strand, 968 - 750
Alignment:
Q  3 tcataaatttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacattacaatagaattaacatgatcaatacccatac 102  Q
    |||||||||||||||| |||||||||||| |||||  | |||||||||||| || || ||||||| ||||||| || |||| |||||||| |||||||      
T  968 tcataaatttcaatcagtttatgatcacatcaacaaca-agattaagtttttatcctgaacattatattacaagagtattatcatgatcattacccattt 870  T
Q  103 ccct-cataatcatcatcaaaccctaaccctcaatttatcttccaaaa-ctatgcaattaggtcaattttcagaaattatagattatgattattgagaga 200  Q
    |||| ||||||| |||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  869 cccttcataatcctcatcaaaccctaaccctcaatttattttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagaga 770  T
Q  201 tagtctcacccttaccttag 220  Q
    ||||||||||||||||||||    
T  769 tagtctcacccttaccttag 750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 129; Significance: 8e-67; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 8 - 220
Target Start/End: Original strand, 135 - 346
Alignment:
Q  8 aatttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacattacaatagaattaacatgatcaatacccatacccctc 107  Q
    |||||||| ||||||||||||||| ||| |  ||||||||||| |||| ||| ||||  | | ||||| | |||||||||||||| ||||||| ||||||    
T  135 aatttcaaccaatttatgatcacatcaataacatagattaagtcttcaatctgaacaccataatacaagaaaattaacatgatcattacccattcccctc 234  T
Q  108 ataatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctc 207  Q
    | ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  235 agaatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaa-tttcagaaattatagattatggttattgagagatagtctc 333  T
Q  208 acccttaccttag 220  Q
    |||||||||||||    
T  334 acccttaccttag 346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 127; Significance: 1e-65; HSPs: 16)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 3 - 220
Target Start/End: Complemental strand, 8046049 - 8045832
Alignment:
Q  3 tcataaatttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacattacaatagaattaacatgatcaataccca-ta 101  Q
    ||||||||||||||||||||||||||||| |||||  |  ||||||||||||||||| ||||||| ||||||| ||||||||||| |||  |||||| |     
T  8046049 tcataaatttcaatcaatttatgatcacagcaacaacaaggattaagttttcattctgaacattatattacaagagaattaacattatctttacccattt 8045950  T
Q  102 cccctcataatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagat 201  Q
    ||| ||| |||  || ||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||    
T  8045949 cccttcagaattctcgtcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaa-tttcagaaattatagattatgattatcgagagat 8045851  T
Q  202 agtctcacccttaccttag 220  Q
    |||||||||||||||||||    
T  8045850 agtctcacccttaccttag 8045832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 3 - 220
Target Start/End: Original strand, 11847945 - 11848169
Alignment:
Q  3 tcataaatttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacattacaatagaattaacatgatcaatacccatac 102  Q
    |||||| |||||||||||||||||||||| |||||  | |||||||||||||||||| ||||||| |||| || || ||||||||||||| ||||||| |    
T  11847945 tcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattataaaaggattaacatgatcattacccattc 11848044  T
Q  103 c-cctcataatcatcatcaaaccctaaccctcaa------tttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattg 195  Q
    | | ||| |||| |||||||||||||||||||||      || || || ||||||||||| | ||||||||||||||| |||||||||||||||||||||    
T  11848045 ctcttcagaatcgtcatcaaaccctaaccctcaattgattttaatttttcaaaactatgccactaggtcaattttcaggaattatagattatgattattg 11848144  T
Q  196 agagatagtctcacccttaccttag 220  Q
    |||||||||||||||||||||||||    
T  11848145 agagatagtctcacccttaccttag 11848169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 110 - 225
Target Start/End: Original strand, 53483650 - 53483765
Alignment:
Q  110 aatcatcatcaaaccctaaccctca-atttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctca 208  Q
    |||||||||||||||||||   ||| |||  | ||| |||||||| |||||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  53483650 aatcatcatcaaaccctaattttcatattatttttcaaaaactattcaattaggtcaa-tttcaggaattatagattatgattattgagagatagtctca 53483748  T
Q  209 cccttaccttagaattg 225  Q
    |||||||||||||||||    
T  53483749 cccttaccttagaattg 53483765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 164 - 221
Target Start/End: Original strand, 15408139 - 15408196
Alignment:
Q  164 caattttcagaaattatagattatgattattgagagatagtctcacccttaccttaga 221  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||||||||||||    
T  15408139 caattttcagaaattatatactatgattattgagagatagtctcacccttaccttaga 15408196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 165 - 247
Target Start/End: Complemental strand, 16146885 - 16146803
Alignment:
Q  165 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtagagacaaaaagcacagcaaa 247  Q
    ||||||||||||||| | ||||||| |||||| ||||| || ||||||||||||||||||| | ||||||| |||||||||||    
T  16146885 aattttcagaaattacatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaatagcacagcaaa 16146803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 163 - 219
Target Start/End: Original strand, 8834895 - 8834951
Alignment:
Q  163 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 219  Q
    ||||||||||||||||||| |||||||| |||||||| ||| |||||||||||||||    
T  8834895 tcaattttcagaaattatatattatgatcattgagagttagcctcacccttacctta 8834951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 163 - 219
Target Start/End: Original strand, 13888641 - 13888697
Alignment:
Q  163 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 219  Q
    ||||||||||||||||||| |||||||| |||||||| ||| |||||||||||||||    
T  13888641 tcaattttcagaaattatacattatgatcattgagagttagcctcacccttacctta 13888697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 110 - 225
Target Start/End: Original strand, 27906210 - 27906326
Alignment:
Q  110 aatcatcatcaaaccctaaccctcaattt-atcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctca 208  Q
    ||||| ||||| |||||||  |||||||| |||||| | |||||| | ||||  | ||||||||||||||||| |||||||| ||||| ||||| || ||    
T  27906210 aatcaacatcacaccctaattctcaattttatcttcaagaactattctattatattaattttcagaaattatacattatgatcattgaaagataatccca 27906309  T
Q  209 cccttaccttagaattg 225  Q
    |||||| ||||||||||    
T  27906310 cccttatcttagaattg 27906326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 136 - 217
Target Start/End: Original strand, 14486632 - 14486713
Alignment:
Q  136 tttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacct 217  Q
    ||||||||| | ||| || ||||| | | ||||||||||||||||| |||||||| |||||  |||||||||||||||||||    
T  14486632 tttatcttcaagaacaattcaattcgattaattttcagaaattatatattatgatcattgaaggatagtctcacccttacct 14486713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 163 - 219
Target Start/End: Original strand, 15245215 - 15245271
Alignment:
Q  163 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 219  Q
    ||||||||||||||||||| |||| ||| |||||||| ||| |||||||||||||||    
T  15245215 tcaattttcagaaattatatattacgatcattgagagttagcctcacccttacctta 15245271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 163 - 214
Target Start/End: Complemental strand, 22724742 - 22724691
Alignment:
Q  163 tcaattttcagaaattatagattatgattattgagagatagtctcaccctta 214  Q
    |||||||||||||||| || | ||| ||||||||||||||||||||||||||    
T  22724742 tcaattttcagaaattctatactattattattgagagatagtctcaccctta 22724691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 163 - 219
Target Start/End: Original strand, 15308120 - 15308176
Alignment:
Q  163 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 219  Q
    ||||||||||||||||||| |||| ||| |||||||| ||| |||||||||| ||||    
T  15308120 tcaattttcagaaattatatattacgatcattgagagttagcctcacccttaactta 15308176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 221
Target Start/End: Original strand, 14912081 - 14912139
Alignment:
Q  163 tcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttaga 221  Q
    ||||||||||||| ||||| ||||  || |||||||| |||||| ||||||||||||||    
T  14912081 tcaattttcagaagttatatattacaatcattgagagttagtctaacccttaccttaga 14912139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 219
Target Start/End: Original strand, 15069781 - 15069811
Alignment:
Q  189 attattgagagatagtctcacccttacctta 219  Q
    |||||||||||||||||||||||||||||||    
T  15069781 attattgagagatagtctcacccttacctta 15069811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 219
Target Start/End: Original strand, 15076381 - 15076411
Alignment:
Q  189 attattgagagatagtctcacccttacctta 219  Q
    |||||||||||||||||||||||||||||||    
T  15076381 attattgagagatagtctcacccttacctta 15076411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 220
Target Start/End: Complemental strand, 15747592 - 15747556
Alignment:
Q  184 ttatgattattgagagatagtctcacccttaccttag 220  Q
    |||| ||||||||||| ||||||||||||||||||||    
T  15747592 ttataattattgagagttagtctcacccttaccttag 15747556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 126; Significance: 5e-65; HSPs: 2)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 8 - 220
Target Start/End: Complemental strand, 8786 - 8574
Alignment:
Q  8 aatttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacattacaatagaattaacatgatcaatacccatacccctc 107  Q
    |||||||||||| ||||||||||| |||||  |  ||||||||||||||| | ||||||| ||||||| ||||||||||| |||| ||||||| ||  ||    
T  8786 aatttcaatcaagttatgatcacagcaacaacaaggattaagttttcattttgaacattaaattacaagagaattaacataatcattacccattcca-tc 8688  T
Q  108 ataatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaa-ttttcagaaattatagattatgattattgagagatagtct 206  Q
    |||||||||||||||||||||||||||| |||| |||||||||||| |||||||||||| |||||||||||||||||||||||||||||||| |||||||    
T  8687 ataatcatcatcaaaccctaaccctcaaattattttccaaaactatacaattaggtcaatttttcagaaattatagattatgattattgagatatagtct 8588  T
Q  207 cacccttaccttag 220  Q
    ||||||||||||||    
T  8587 cacccttaccttag 8574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117; HSP #2
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 3 - 220
Target Start/End: Complemental strand, 2114 - 1897
Alignment:
Q  3 tcataaatttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacattacaatagaattaacatgatcaatacccatac 102  Q
    |||| |||||||||||| ||||||||||| |||||  |  ||||||||||||||| | ||||||| ||||||| ||||||||||| |||| ||||||| |    
T  2114 tcatcaatttcaatcaagttatgatcacagcaacaacaaggattaagttttcattatgaacattaaattacaagagaattaacataatcattacccattc 2015  T
Q  103 ccctcataatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaatttt-cagaaattatagattatgattattgagagat 201  Q
    |  ||| |||||||||||||||||||||||||| |||| |||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| ||    
T  2014 ca-tcaaaatcatcatcaaaccctaaccctcaaattattttccaaaactatacaattaggtcaatttttcagaaattatagattatgattattgagatat 1916  T
Q  202 agtctcacccttaccttag 220  Q
    |||||||||||||||||||    
T  1915 agtctcacccttaccttag 1897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 111; Significance: 4e-56; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 24 - 220
Target Start/End: Original strand, 30715 - 30913
Alignment:
Q  24 tgatcacaacaacagtatagattaagttttcattctaaacattacattacaatagaattaacatgatcaatac-ccatacccctcataatcatcatcaaa 122  Q
    |||||||| ||||| ||||||||| |  ||||||||  |||| || |||||| | | |||||||||||  ||| |||| ||||||| |||||||||||||    
T  30715 tgatcacatcaacattatagattaggaattcattctgcacatcactttacaacatatttaacatgatcgttacaccattcccctcaaaatcatcatcaaa 30814  T
Q  123 ccctaaccctcaattt-atcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 220  Q
    |||||| ||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30815 ccctaatcctcaattttaccttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 30913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 110; Significance: 2e-55; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 10 - 217
Target Start/End: Complemental strand, 3832 - 3624
Alignment:
Q  10 tttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacattacaatagaattaacatgatcaatacccatacccctcat 109  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||  ||||| ||||||||| | |||||||||||||| ||||||| |||||||     
T  3832 tttcaatcaatttatgatcacaacaacagtatagattaagatttcattccgaacatcacattacaacataattaacatgatcattacccatccccctcag 3733  T
Q  110 aatcatcatcaaaccctaaccctcaa-tttatcttccaaaactatgcaattaggtcaattttcagaaattatagattat-gattattgagagatagtctc 207  Q
    |||||||||||||||||||||||||| |||||| | |||   || |||||||||||||||||| ||||||| | |||||  |||| ||||||||||||||    
T  3732 aatcatcatcaaaccctaaccctcaattttatcct-caaggttaagcaattaggtcaattttccgaaattacatattatctattaatgagagatagtctc 3634  T
Q  208 acccttacct 217  Q
    ||||||||||    
T  3633 acccttacct 3624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 108; Significance: 3e-54; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 7 - 220
Target Start/End: Original strand, 18010 - 18225
Alignment:
Q  7 aaatttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacattacaat-agaattaacatgatcaatacccatacccc 105  Q
    ||||||||||||||| ||||||||| |||||  |||| |||||||||||||||  |||| |||||||||  ||||||||||||| || ||||  | |||     
T  18010 aaatttcaatcaattcatgatcacagcaacaacataggttaagttttcattctggacatcacattacaaacagaattaacatgaccattaccatttcccg 18109  T
Q  106 tcataatcatcatcaaaccctaaccctcaatttatcttccaaaa-ctatgcaattaggtcaattttcagaaattatagattatgattattgagagatagt 204  Q
    | | ||||||||| ||||| ||||||||||||||| |||| ||| ||| ||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  18110 ttagaatcatcattaaaccttaaccctcaatttattttcctaaagctaagcaattaggtcaattttcaaaaattatagattatgattattgagagatagt 18209  T
Q  205 ctcacccttaccttag 220  Q
    ||||||||||||||||    
T  18210 ctcacccttaccttag 18225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 99; Significance: 6e-49; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 10 - 217
Target Start/End: Complemental strand, 3504 - 3295
Alignment:
Q  10 tttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacattacaatagaattaacatga-tcaatacccatacccctca 108  Q
    ||||||||||||| |||||||| ||||||||||||||||| ||||||||| ||||| ||||||||| | ||||||||||| ||| ||||||| |||||||    
T  3504 tttcaatcaatttgtgatcacagcaacagtatagattaagatttcattctgaacatcacattacaacaaaattaacatgattcattacccattcccctca 3405  T
Q  109 taatcatcatcaaaccctaaccctcaa-tttatcttccaaaactatgcaattaggtcaattttcagaaattatagattat-gattattgagagatagtct 206  Q
     |||||||||||||||||||||||||| ||||||  ||||   || |||||||||||||||||| ||||||| | |||||  |||| |||||||||||||    
T  3404 gaatcatcatcaaaccctaaccctcaattttatc-cccaaggttaagcaattaggtcaattttccgaaattacatattatctattaatgagagatagtct 3306  T
Q  207 cacccttacct 217  Q
    |||||||||||    
T  3305 cacccttacct 3295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 86; Significance: 4e-41; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 165 - 270
Target Start/End: Original strand, 10239 - 10344
Alignment:
Q  165 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtagagacaaaaagcacagcaaatccgttcctaagttctt 264  Q
    ||||||||||||||| | |||||||||||||  ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10239 aattttcagaaattacatattatgattattggaagataatctcacccttaccttagaattgtagagacaaaaagcacagcaaatccgttcctaagttctt 10338  T
Q  265 ctctct 270  Q
    ||||||    
T  10339 ctctct 10344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 148 - 270
Target Start/End: Complemental strand, 493099 - 492978
Alignment:
Q  148 aactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtagagacaaaaagcacagcaaa 247  Q
    |||||| | ||||| | ||||||||||||||||| |||| ||||||||| ||||| |||||||||||||||||||||| |||||||||||||||||||||    
T  493099 aactattccattagattaattttcagaaattatacatta-gattattgaaagataatctcacccttaccttagaattgcagagacaaaaagcacagcaaa 493001  T
Q  248 tccgttcctaagttcttctctct 270  Q
    |||||||||||||||||||||||    
T  493000 tccgttcctaagttcttctctct 492978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0796 (Bit Score: 77; Significance: 9e-36; HSPs: 2)
Name: scaffold0796
Description:

Target: scaffold0796; HSP #1
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 33 - 261
Target Start/End: Complemental strand, 1917 - 1691
Alignment:
Q  33 caacagtatagattaagttttcattctaaacattacattacaatagaattaacatgatcaatacccatacccctcataatcatcatcaaaccctaaccct 132  Q
    |||||| || ||||||| ||||||||| ||||||| ||| | | | || |||||| |||  ||| ||| ||  ||| ||||||||||||||||||||  |    
T  1917 caacagcatggattaagctttcattcttaacattaaattccgagaaaactaacatcatccttactcattcca-tcagaatcatcatcaaaccctaacttt 1819  T
Q  133 caatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtagagac 232  Q
    ||  |||| |||||||||||| ||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||  ||||||  |     
T  1818 catattattttccaaaactattcaattaggtcaattt-caggaattatagattatgattattgagagatagtctcacccttaccttagttttgtaggaag 1720  T
Q  233 aaaaagcacagcaaatccgttcctaagtt 261  Q
    ||  | ||||||||||| | |||||||||    
T  1719 aattaacacagcaaatcagctcctaagtt 1691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0796; HSP #2
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 33 - 261
Target Start/End: Complemental strand, 5940 - 5714
Alignment:
Q  33 caacagtatagattaagttttcattctaaacattacattacaatagaattaacatgatcaatacccatacccctcataatcatcatcaaaccctaaccct 132  Q
    |||||| || ||||||| ||||||||| ||||||| ||| | | | || |||||| |||  ||| ||| ||  ||| ||||||||||||||||||||  |    
T  5940 caacagcatggattaagctttcattcttaacattaaattccgagaaaactaacatcatccttactcattcca-tcagaatcatcatcaaaccctaacttt 5842  T
Q  133 caatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtagagac 232  Q
    ||  |||| |||||||||||| ||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||  ||||||  |     
T  5841 catattattttccaaaactattcaattaggtcaattt-caggaattatagattatgattattgagagatagtctcacccttaccttagttttgtaggaag 5743  T
Q  233 aaaaagcacagcaaatccgttcctaagtt 261  Q
    ||  | ||||||||||| | |||||||||    
T  5742 aattaacacagcaaatcagctcctaagtt 5714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 76; Significance: 3e-35; HSPs: 4)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 137 - 220
Target Start/End: Original strand, 904 - 987
Alignment:
Q  137 ttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 220  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  904 ttatcttccaagactatgcaattaggtcaattttcagaaactatagattatgattattgagagatagtctcacccttaccttag 987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 137 - 220
Target Start/End: Original strand, 8049 - 8132
Alignment:
Q  137 ttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 220  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  8049 ttatcttccaagactatgcaattaggtcaattttcagaaactatagattatgattattgagagatagtctcacccttaccttag 8132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 75
Target Start/End: Original strand, 832 - 899
Alignment:
Q  8 aatttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacattacaa 75  Q
    |||| ||||||||||||||||||| |||||  | |||||||||||||||||| ||||| |||||||||    
T  832 aattccaatcaatttatgatcacagcaacaacacagattaagttttcattctgaacatcacattacaa 899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 75
Target Start/End: Original strand, 7977 - 8044
Alignment:
Q  8 aatttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacattacaa 75  Q
    |||| ||||||||||||||||||| |||||  | |||||||||||||||||| ||||| |||||||||    
T  7977 aattccaatcaatttatgatcacagcaacaacacagattaagttttcattctgaacatcacattacaa 8044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1318 (Bit Score: 74; Significance: 5e-34; HSPs: 1)
Name: scaffold1318
Description:

Target: scaffold1318; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 165 - 270
Target Start/End: Complemental strand, 1967 - 1862
Alignment:
Q  165 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtagagacaaaaagcacagcaaatccgttcctaagttctt 264  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||| ||||| | ||||||||||||||||||||||||||||||||||||    
T  1967 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttacaattgcaaagacaaaaagcacagcaaatccgttcctaagttctt 1868  T
Q  265 ctctct 270  Q
    ||||||    
T  1867 ctctct 1862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 66; Significance: 3e-29; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 165 - 270
Target Start/End: Original strand, 135438 - 135543
Alignment:
Q  165 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtagagacaaaaagcacagcaaatccgttcctaagttctt 264  Q
    ||||||||||||||||| ||||||| |||||| ||||| |||||| ||||||||||||||| | ||||||| ||||||||||||| ||||||||| ||||    
T  135438 aattttcagaaattatatattatgactattgaaagataatctcacgcttaccttagaattgcaaagacaaatagcacagcaaatcagttcctaagctctt 135537  T
Q  265 ctctct 270  Q
    ||||||    
T  135538 ctctct 135543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 221
Target Start/End: Original strand, 163352 - 163388
Alignment:
Q  185 tatgattattgagagatagtctcacccttaccttaga 221  Q
    ||||||||||||||| ||| |||||||||||||||||    
T  163352 tatgattattgagagttagcctcacccttaccttaga 163388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 110 - 221
Target Start/End: Complemental strand, 45384 - 45273
Alignment:
Q  110 aatcatcatcaaaccctaaccctca-atttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctca 208  Q
    |||||||||||||||||||   ||| |||  | ||| |||||||| |||||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  45384 aatcatcatcaaaccctaattttcatattatttttcaaaaactattcaattaggtcaa-tttcaggaattatagattatgattattgagagatagtctca 45286  T
Q  209 cccttaccttaga 221  Q
    |||||||||||||    
T  45285 cccttaccttaga 45273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0720 (Bit Score: 59; Significance: 5e-25; HSPs: 1)
Name: scaffold0720
Description:

Target: scaffold0720; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 136 - 270
Target Start/End: Complemental strand, 3486 - 3352
Alignment:
Q  136 tttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtagagacaaa 235  Q
    ||||||||| | |||||| |  |||| | ||||||||||||||||| ||||   | ||||| ||||| | |||||||||||||||||||| | |||||||    
T  3486 tttatcttcaagaactattcttttagattaattttcagaaattatatattaaattcattgaaagataatatcacccttaccttagaattgcaaagacaaa 3387  T
Q  236 aagcacagcaaatccgttcctaagttcttctctct 270  Q
    |||||| ||||||||||||||||||||| ||||||    
T  3386 aagcacggcaaatccgttcctaagttctcctctct 3352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 59; Significance: 5e-25; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 165 - 270
Target Start/End: Complemental strand, 79545 - 79439
Alignment:
Q  165 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtagagacaaaaagcacagc-aaatccgttcctaagttct 263  Q
    ||||||||||||||| | ||||||| |||||| ||||| || ||||||||||||||||||| | ||||||| |||||||| ||||| |||||||||||||    
T  79545 aattttcagaaattacatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaatagcacagcaaaatcagttcctaagttct 79446  T
Q  264 tctctct 270  Q
    |||||||    
T  79445 tctctct 79439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 155 - 219
Target Start/End: Original strand, 16811 - 16875
Alignment:
Q  155 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 219  Q
    ||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  16811 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 16875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 155 - 219
Target Start/End: Original strand, 116887 - 116951
Alignment:
Q  155 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 219  Q
    ||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  116887 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 116951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 218
Target Start/End: Original strand, 60441 - 60474
Alignment:
Q  185 tatgattattgagagatagtctcacccttacctt 218  Q
    ||||||||||||||| ||||||||||||||||||    
T  60441 tatgattattgagagttagtctcacccttacctt 60474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 165 - 270
Target Start/End: Complemental strand, 50025 - 49919
Alignment:
Q  165 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtagagacaaaaagcacagc-aaatccgttcctaagttct 263  Q
    |||||| |||||||| | ||||||| |||||| ||||| || ||||||||||||||||||| | ||||||| |||||| | ||||| |||||||||||||    
T  50025 aatttttagaaattacatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaaatagcacaacaaaatcagttcctaagttct 49926  T
Q  264 tctctct 270  Q
    |||||||    
T  49925 tctctct 49919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0609 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0609
Description:

Target: scaffold0609; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 136 - 270
Target Start/End: Complemental strand, 5941 - 5806
Alignment:
Q  136 tttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtagagacaa- 234  Q
    ||||||||| | |||||| ||||||| | ||||||||||||||||| ||||| || ||||| ||||| || ||||||||||||||||||| | ||||||     
T  5941 tttatcttcaagaactattcaattagattaattttcagaaattatatattataatcattgaaagataatcccacccttaccttagaattgcaaagacaaa 5842  T
Q  235 -aaagcacagcaaatccgttcctaagttcttctctct 270  Q
     ||| |||||| |||| |||||  |||||||||||||    
T  5841 gaaaacacagc-aatcggttccctagttcttctctct 5806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 164 - 221
Target Start/End: Original strand, 17643 - 17700
Alignment:
Q  164 caattttcagaaattatagattatgattattgagagatagtctcacccttaccttaga 221  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||    
T  17643 caattttcagaaattatacattatggttattgagagatagtctcacccttaccttaga 17700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 165 - 270
Target Start/End: Original strand, 997 - 1101
Alignment:
Q  165 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtagagacaaaaagcacagcaaatccgttcctaagttctt 264  Q
    ||||||||||||| ||| ||||| | |||||||||||  || ||||||||||||||||||| | |||| ||||||||||||||||  |||||| ||||||    
T  997 aattttcagaaatcatatattatcactattgagagatgatcccacccttaccttagaattgcaaagac-aaaagcacagcaaatcaattcctaggttctt 1095  T
Q  265 ctctct 270  Q
    ||||||    
T  1096 ctctct 1101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 164 - 221
Target Start/End: Complemental strand, 40587 - 40530
Alignment:
Q  164 caattttcagaaattatagattatgattattgagagatagtctcacccttaccttaga 221  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||||||||||||    
T  40587 caattttcagaaattatatactatgattattgagagatagtctcacccttaccttaga 40530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 164 - 221
Target Start/End: Original strand, 135473 - 135530
Alignment:
Q  164 caattttcagaaattatagattatgattattgagagatagtctcacccttaccttaga 221  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||||||||||||    
T  135473 caattttcagaaattatatactatgattattgagagatagtctcacccttaccttaga 135530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0461 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0461
Description:

Target: scaffold0461; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 155 - 219
Target Start/End: Complemental strand, 72 - 8
Alignment:
Q  155 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 219  Q
    ||||||| ||||||||||||||||||  |||| ||||||||||||||||||||||||||||||||    
T  72 caattagatcaattttcagaaattatgtattaagattattgagagatagtctcacccttacctta 8  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 165 - 233
Target Start/End: Original strand, 9336 - 9404
Alignment:
Q  165 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtagagaca 233  Q
    ||||||||||||||||| ||||||| |||||| ||||| || |||||||||||||||||||||||||||    
T  9336 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgtagagaca 9404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 155 - 219
Target Start/End: Original strand, 13623 - 13687
Alignment:
Q  155 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 219  Q
    ||||||| ||||||||||||||||||  |||| ||||||||||||||||||||||||||||||||    
T  13623 caattagatcaattttcagaaattatgtattaagattattgagagatagtctcacccttacctta 13687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 155 - 219
Target Start/End: Complemental strand, 101992 - 101928
Alignment:
Q  155 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 219  Q
    ||||||| ||||||||||| ||||||| | |||||||||||||||||||||||||||||||||||    
T  101992 caattagatcaattttcaggaattatatactatgattattgagagatagtctcacccttacctta 101928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 22646 - 22594
Alignment:
Q  166 attttcagaaattatagattatgattattgagagatagtctcacccttacctt 218  Q
    |||||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  22646 attttcagaaattatatactatgattattgagagatagtctcacccttacctt 22594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 164 - 219
Target Start/End: Complemental strand, 34331 - 34276
Alignment:
Q  164 caattttcagaaattatagattatgattattgagagatagtctcacccttacctta 219  Q
    |||||||||||||||||| | ||||||||| |||||||||||||||||||||||||    
T  34331 caattttcagaaattatatactatgattatcgagagatagtctcacccttacctta 34276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 221
Target Start/End: Complemental strand, 35495 - 35437
Alignment:
Q  163 tcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttaga 221  Q
    ||||||||||||| ||||| ||||  || |||||||| |||||| ||||||||||||||    
T  35495 tcaattttcagaagttatacattacaatcattgagagttagtcttacccttaccttaga 35437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 163 - 219
Target Start/End: Original strand, 12296 - 12352
Alignment:
Q  163 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 219  Q
    ||||||||||||||||||| |||||||| |||||||| ||| |||||||||||||||    
T  12296 tcaattttcagaaattatatattatgatcattgagagttagcctcacccttacctta 12352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0634 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 59
Target Start/End: Original strand, 3501 - 3556
Alignment:
Q  4 cataaatttcaatcaatttatgatcacaacaacagtatagattaagttttcattct 59  Q
    |||||||||||||||||||||||||||| |||||  | ||||||||||||||||||    
T  3501 cataaatttcaatcaatttatgatcacagcaacaacaaagattaagttttcattct 3556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 156 - 219
Target Start/End: Original strand, 1378 - 1441
Alignment:
Q  156 aattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 219  Q
    |||||| |||||||||| |||||||| || ||||| ||||| ||||||||||||||||||||||    
T  1378 aattagatcaattttcaaaaattatatatcatgatcattgaaagatagtctcacccttacctta 1441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 164 - 219
Target Start/End: Complemental strand, 15052 - 14997
Alignment:
Q  164 caattttcagaaattatagattatgattattgagagatagtctcacccttacctta 219  Q
    |||||||||||||||||| |||| ||| |||||||| |||||||||||||||||||    
T  15052 caattttcagaaattatatattaagatcattgagagttagtctcacccttacctta 14997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 146 - 235
Target Start/End: Complemental strand, 13969 - 13879
Alignment:
Q  146 aaaactatgcaattaggtcaatttt-cagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtagagacaaa 235  Q
    |||||||| ||||||| | |||||| ||||||||||| ||||| || ||||| ||||| || ||||||||||||||||||| | |||||||    
T  13969 aaaactattcaattagattaatttttcagaaattatatattataatcattgaaagataatcccacccttaccttagaattgcaaagacaaa 13879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0453 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 136 - 224
Target Start/End: Complemental strand, 10634 - 10546
Alignment:
Q  136 tttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaatt 224  Q
    ||||||||| | |||||| | ||||| | ||||||||||||||||| |||| ||| ||||| ||||| || ||| ||||||||||||||    
T  10634 tttatcttcaagaactattctattagattaattttcagaaattatacattaagatcattgaaagataatcccacacttaccttagaatt 10546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 165 - 225
Target Start/End: Complemental strand, 23624 - 23564
Alignment:
Q  165 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattg 225  Q
    ||||||||||||||||| |||||||| ||| | ||||| || |||||||||||||||||||    
T  23624 aattttcagaaattatacattatgatcattcaaagataatcccacccttaccttagaattg 23564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0815 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0815
Description:

Target: scaffold0815; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 168 - 219
Target Start/End: Original strand, 1453 - 1504
Alignment:
Q  168 tttcagaaattatagattatgattattgagagatagtctcacccttacctta 219  Q
    |||||||||||||| |||| ||| |||||||| |||||||||||||||||||    
T  1453 tttcagaaattatacattaagatcattgagagttagtctcacccttacctta 1504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 163 - 218
Target Start/End: Complemental strand, 39563 - 39508
Alignment:
Q  163 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctt 218  Q
    ||||||||| ||||||||| |||||||| |||||||| ||| ||||||||||||||    
T  39563 tcaattttctgaaattatatattatgatcattgagagttagcctcacccttacctt 39508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0384 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 167 - 261
Target Start/End: Complemental strand, 16117 - 16023
Alignment:
Q  167 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtagagacaaaaagcacagcaaatccgttcctaagtt 261  Q
    ||||||||||| ||| ||||| | |||||| ||||| || ||||||||||||||||||||||  | ||  | ||||||||||| | |||||||||    
T  16117 ttttcagaaatcatatattataactattgaaagataatcccacccttaccttagaattgtaggaagaattaacacagcaaatcagctcctaagtt 16023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 163 - 219
Target Start/End: Complemental strand, 2684 - 2628
Alignment:
Q  163 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 219  Q
    ||||||||||||| ||||| ||||| || |||||||| ||| |||||||||||||||    
T  2684 tcaattttcagaagttatatattataatcattgagagttagcctcacccttacctta 2628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 217
Target Start/End: Original strand, 73229 - 73337
Alignment:
Q  110 aatcatcatcaaaccctaaccctcaattt-atcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctca 208  Q
    ||||| ||||| |||||||  |||||||| |||||| | | |||| | ||||| | |||||||| |||||||| |||||||| ||||| ||||| || ||    
T  73229 aatcaacatcacaccctaattctcaattttatcttcaagagctatcctattagattaattttcataaattatacattatgatcattgaaagataatccca 73328  T
Q  209 cccttacct 217  Q
    |||||||||    
T  73329 cccttacct 73337  T

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Target: scaffold2054 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold2054
Description:

Target: scaffold2054; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 220
Target Start/End: Original strand, 680 - 770
Alignment:
Q  131 ctcaatttatcttccaaaactatgcaattaggtcaatttt-cagaaattatagattatgattattgagagatagtctcacccttaccttag 220  Q
    |||||||||| ||| | |||||| |  |||||| |||||| ||||||||||| |||| ||| ||||| ||||| || ||||||||||||||    
T  680 ctcaatttattttcaagaactattcttttaggttaatttttcagaaattatatattaagatcattgaaagataatcccacccttaccttag 770  T

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Target: scaffold0481 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0481
Description:

Target: scaffold0481; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 218
Target Start/End: Complemental strand, 721 - 676
Alignment:
Q  173 gaaattatagattatgattattgagagatagtctcacccttacctt 218  Q
    ||||||||| |||| ||| |||||||| ||||||||||||||||||    
T  721 gaaattatacattaagatcattgagagttagtctcacccttacctt 676  T

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Target: scaffold0962 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0962
Description:

Target: scaffold0962; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 221
Target Start/End: Complemental strand, 650 - 614
Alignment:
Q  185 tatgattattgagagatagtctcacccttaccttaga 221  Q
    ||||||||||||||| ||| |||||||||||||||||    
T  650 tatgattattgagagttagcctcacccttaccttaga 614  T

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Target: scaffold0600 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0600
Description:

Target: scaffold0600; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 163 - 219
Target Start/End: Original strand, 732 - 788
Alignment:
Q  163 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 219  Q
    ||||||||||||| ||||| ||||| || |||||||| ||| ||||||| |||||||    
T  732 tcaattttcagaagttatatattataatcattgagagttagcctcacccctacctta 788  T

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Target: scaffold0422 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0422
Description:

Target: scaffold0422; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 221
Target Start/End: Original strand, 3962 - 4014
Alignment:
Q  169 ttcagaaattatagattatgattattgagagatagtctcacccttaccttaga 221  Q
    ||||||| ||||| | ||||||||||||  | |||||||||||||||||||||    
T  3962 ttcagaatttatacactatgattattgaatgttagtctcacccttaccttaga 4014  T

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Target: scaffold0181 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 221
Target Start/End: Complemental strand, 25555 - 25519
Alignment:
Q  185 tatgattattgagagatagtctcacccttaccttaga 221  Q
    ||||||||||||||| ||| |||||||||||||||||    
T  25555 tatgattattgagagttagcctcacccttaccttaga 25519  T

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Target: scaffold0180 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 170 - 219
Target Start/End: Original strand, 11630 - 11681
Alignment:
Q  170 tcagaaattataga--ttatgattattgagagatagtctcacccttacctta 219  Q
    |||||||||||| |  |||| ||||||||||| |||||||||||||||||||    
T  11630 tcagaaattatataatttataattattgagagttagtctcacccttacctta 11681  T

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Target: scaffold0031 (Bit Score: 29; Significance: 0.0000004; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 163 - 219
Target Start/End: Original strand, 121902 - 121958
Alignment:
Q  163 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 219  Q
    ||||||||||||  ||||| ||||| || |||||||| ||| |||||||||||||||    
T  121902 tcaattttcagattttatatattataatcattgagagttagcctcacccttacctta 121958  T

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Target: scaffold0031; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 163 - 219
Target Start/End: Original strand, 132778 - 132834
Alignment:
Q  163 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 219  Q
    ||||||||||||  ||||| ||||| || |||||||| ||| |||||||||||||||    
T  132778 tcaattttcagattttatatattataatcattgagagttagcctcacccttacctta 132834  T

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Target: scaffold0028 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 219
Target Start/End: Original strand, 69749 - 69801
Alignment:
Q  167 ttttcagaaattatagattatgattattgagagatagtctcacccttacctta 219  Q
    |||||| |||||||| |||| ||| ||||| || |||||||||||||||||||    
T  69749 ttttcataaattatatattaagatcattgaaagttagtctcacccttacctta 69801  T

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