View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16148_low_4 (Length: 223)

Name: NF16148_low_4
Description: NF16148
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16148_low_4
NF16148_low_4
[»] chr7 (8 HSPs)
chr7 (10-133)||(48376139-48376262)
chr7 (10-133)||(16059889-16060013)
chr7 (10-132)||(9079686-9079808)
chr7 (7-133)||(37946455-37946581)
chr7 (18-133)||(4532362-4532477)
chr7 (7-133)||(20025335-20025461)
chr7 (7-133)||(22615331-22615460)
chr7 (7-86)||(13486397-13486476)
[»] chr3 (14 HSPs)
chr3 (10-133)||(16613844-16613967)
chr3 (10-133)||(22045286-22045409)
chr3 (10-133)||(4713454-4713577)
chr3 (27-133)||(14063098-14063204)
chr3 (10-133)||(14055682-14055805)
chr3 (7-133)||(13927623-13927749)
chr3 (13-133)||(16363225-16363344)
chr3 (10-133)||(13929364-13929487)
chr3 (7-77)||(21974662-21974732)
chr3 (7-77)||(21997093-21997163)
chr3 (14-89)||(17790328-17790403)
chr3 (14-89)||(19098770-19098845)
chr3 (7-77)||(22159232-22159300)
chr3 (7-133)||(14482203-14482329)
[»] scaffold0003 (1 HSPs)
scaffold0003 (10-133)||(130127-130250)
[»] chr6 (7 HSPs)
chr6 (10-132)||(14980920-14981042)
chr6 (7-133)||(8404414-8404539)
chr6 (8-133)||(10907421-10907545)
chr6 (8-100)||(21038929-21039021)
chr6 (8-130)||(21083967-21084087)
chr6 (31-133)||(10641977-10642079)
chr6 (7-87)||(977177-977257)
[»] scaffold0239 (1 HSPs)
scaffold0239 (13-133)||(21799-21919)
[»] chr1 (3 HSPs)
chr1 (10-133)||(51659311-51659434)
chr1 (10-132)||(13882924-13883047)
chr1 (7-133)||(1567333-1567459)
[»] scaffold0063 (1 HSPs)
scaffold0063 (10-133)||(28916-29037)
[»] scaffold0218 (1 HSPs)
scaffold0218 (10-132)||(13717-13839)
[»] chr4 (8 HSPs)
chr4 (7-133)||(15873523-15873648)
chr4 (7-133)||(17335060-17335185)
chr4 (7-130)||(20874250-20874373)
chr4 (14-133)||(11555365-11555484)
chr4 (7-133)||(16285674-16285800)
chr4 (7-133)||(12228379-12228504)
chr4 (22-133)||(9563751-9563862)
chr4 (7-37)||(12136565-12136595)
[»] scaffold0385 (1 HSPs)
scaffold0385 (7-133)||(13590-13715)
[»] chr2 (4 HSPs)
chr2 (7-133)||(23661450-23661576)
chr2 (7-131)||(24786072-24786196)
chr2 (7-133)||(44587040-44587166)
chr2 (7-98)||(32252719-32252809)
[»] chr5 (3 HSPs)
chr5 (22-133)||(24562598-24562709)
chr5 (22-133)||(24603632-24603743)
chr5 (17-133)||(24832626-24832742)
[»] scaffold0145 (1 HSPs)
scaffold0145 (7-133)||(11916-12042)
[»] chr8 (2 HSPs)
chr8 (62-133)||(24505503-24505574)
chr8 (10-38)||(23658012-23658040)


Alignment Details
Target: chr7 (Bit Score: 116; Significance: 4e-59; HSPs: 8)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 10 - 133
Target Start/End: Complemental strand, 48376262 - 48376139
Alignment:
Q  10 aaatgaagagattatacatagtaactgttgagactgatgagatagtggagactatattcttttgatatttatttaatgtgcatgcttttccctgttattt 109  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48376262 aaatgaagagattatacatagtaactgttgagaatgatgagatagtggagactatattcttttgatatttatttaatgtgcatgcttttccctgttattt 48376163  T
Q  110 tattatggcaggatttctcacccc 133  Q
    | ||||||||||||||||||||||    
T  48376162 tgttatggcaggatttctcacccc 48376139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 10 - 133
Target Start/End: Complemental strand, 16060013 - 16059889
Alignment:
Q  10 aaatgaagagattatacatagtaactgttgagactgatgagatagtggagactatattcttttgatattta-tttaatgtgcatgcttttccctgttatt 108  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| |||||    
T  16060013 aaatgaagagattatacatagtaactgttgagaatgatgagatagtggagactatattcttttgatatttattttaatgtgcatgtttttccctattatt 16059914  T
Q  109 ttattatggcaggatttctcacccc 133  Q
    || ||||||||||||||||||||||    
T  16059913 ttgttatggcaggatttctcacccc 16059889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 10 - 132
Target Start/End: Complemental strand, 9079808 - 9079686
Alignment:
Q  10 aaatgaagagattatacatagtaactgttgagactgatgagatagtggagactatattcttttgatatttatttaatgtgcatgcttttccctgttattt 109  Q
    ||||||||||||||||||||||||||||||||| |  |||||||||||| |||||||||||||||||||||||||||||||||||||||| || |||||     
T  9079808 aaatgaagagattatacatagtaactgttgagaatcttgagatagtggaaactatattcttttgatatttatttaatgtgcatgcttttctctattatta 9079709  T
Q  110 tattatggcaggatttctcaccc 132  Q
    | |||||||| ||||||||||||    
T  9079708 tgttatggcatgatttctcaccc 9079686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 7 - 133
Target Start/End: Original strand, 37946455 - 37946581
Alignment:
Q  7 gtgaaatgaagagattatacatagtaactgttgagactgatgagatagtggagactatattcttttgatatttatttaatgtgcatgcttttccctgtta 106  Q
    ||||||||||||||||||||||| ||||||| |||| ||||||||  ||||||| |||||||||||||||||||||||| |||||| ||||| ||| |||    
T  37946455 gtgaaatgaagagattatacataataactgtggagagtgatgagacggtggagattatattcttttgatatttatttaaggtgcatactttttcctatta 37946554  T
Q  107 ttttattatggcaggatttctcacccc 133  Q
    || | ||||| || ||||| |||||||    
T  37946555 ttatgttatgacatgatttatcacccc 37946581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 18 - 133
Target Start/End: Original strand, 4532362 - 4532477
Alignment:
Q  18 agattatacatagtaactgttgagactgatgagatagtggagactatattcttttgatatttatttaatgtgcatgcttttccctgttattttattatgg 117  Q
    ||||||||||||||||||| ||||| ||||||||||||||||| ||||||||||| |||||||||||| |||||||| ||| ||| ||||| | |||||     
T  4532362 agattatacatagtaactgctgagagtgatgagatagtggagaatatattcttttaatatttatttaacgtgcatgcattttcctattattatgttatga 4532461  T
Q  118 caggatttctcacccc 133  Q
    ||||||  ||||||||    
T  4532462 caggatacctcacccc 4532477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 7 - 133
Target Start/End: Complemental strand, 20025461 - 20025335
Alignment:
Q  7 gtgaaatgaagagattatacatagtaactgttgagactgatgagatagtggagactatattcttttgatatttatttaatgtgcatgcttttccctgtta 106  Q
    |||||| |||||||||||||||| ||| |||||||| ||  || ||  |||||| |||||| |||||||||||||||||| |||||| |||||||| |||    
T  20025461 gtgaaaagaagagattatacataataattgttgagagtggagatatgttggagattatattattttgatatttatttaatatgcatgtttttccctatta 20025362  T
Q  107 ttttattatggcaggatttctcacccc 133  Q
    || | |||||||||||||||| |||||    
T  20025361 ttatgttatggcaggatttcttacccc 20025335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 7 - 133
Target Start/End: Original strand, 22615331 - 22615460
Alignment:
Q  7 gtgaaatgaagagattatacatagtaactgttgagactgatgag---atagtggagactatattcttttgatatttatttaatgtgcatgcttttccctg 103  Q
    |||||| ||||||||||| |||| ||||| |||||| ||| ||    |||||||||| |||||| |||||||||||||||| | |   || ||||||||     
T  22615331 gtgaaaagaagagattatgcataataactattgagagtgaagaagatatagtggagattatattattttgatatttatttagtatatgtgtttttcccta 22615430  T
Q  104 ttattttattatggcaggatttctcacccc 133  Q
    ||||| | ||||||||||||||||||||||    
T  22615431 ttattatgttatggcaggatttctcacccc 22615460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 86
Target Start/End: Original strand, 13486397 - 13486476
Alignment:
Q  7 gtgaaatgaagagattatacatagtaactgttgagactgatgagatagtggagactatattcttttgatatttatttaat 86  Q
    |||||| ||||| ||||| |||| |||||||||||| ||| || ||| | |||| |||||| ||||||||||||||||||    
T  13486397 gtgaaaagaagatattatgcataataactgttgagagtgaagatatattagagattatattattttgatatttatttaat 13486476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 116; Significance: 4e-59; HSPs: 14)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 10 - 133
Target Start/End: Complemental strand, 16613967 - 16613844
Alignment:
Q  10 aaatgaagagattatacatagtaactgttgagactgatgagatagtggagactatattcttttgatatttatttaatgtgcatgcttttccctgttattt 109  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  16613967 aaatgaagagattatacatagtaactgttgagactgatgagatagtggagactatattcttttggtatttatttaatgtgcatgcttttccctattattt 16613868  T
Q  110 tattatggcaggatttctcacccc 133  Q
    ||||||||||||||||||||||||    
T  16613867 tattatggcaggatttctcacccc 16613844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 10 - 133
Target Start/End: Original strand, 22045286 - 22045409
Alignment:
Q  10 aaatgaagagattatacatagtaactgttgagactgatgagatagtggagactatattcttttgatatttatttaatgtgcatgcttttccctgttattt 109  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  22045286 aaatgaagagattatacatagtaactgttgagactgatgagatagtggagactatattcttttggtatttatttaatgtgcatgcttttccctattattt 22045385  T
Q  110 tattatggcaggatttctcacccc 133  Q
    ||||||||||||||||||||||||    
T  22045386 tattatggcaggatttctcacccc 22045409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 10 - 133
Target Start/End: Original strand, 4713454 - 4713577
Alignment:
Q  10 aaatgaagagattatacatagtaactgttgagactgatgagatagtggagactatattcttttgatatttatttaatgtgcatgcttttccctgttattt 109  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  4713454 aaatgaagagattatacatagtaactgttgagaatgatgagatagtggagactatattcttttgatatttatttaatgtgcatgcttttccctattattt 4713553  T
Q  110 tattatggcaggatttctcacccc 133  Q
    | |||||||| |||||||||||||    
T  4713554 tgttatggcatgatttctcacccc 4713577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 27 - 133
Target Start/End: Original strand, 14063098 - 14063204
Alignment:
Q  27 atagtaactgttgagactgatgagatagtggagactatattcttttgatatttatttaatgtgcatgcttttccctgttattttattatggcaggatttc 126  Q
    |||||||||||||||| | |||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| | |||||||||||||||    
T  14063098 atagtaactgttgagaatcatgagaaagtggagactatattcttttgatatttatttaatgtgcatgtttttccctattattatgttatggcaggatttc 14063197  T
Q  127 tcacccc 133  Q
    |||||||    
T  14063198 tcacccc 14063204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 10 - 133
Target Start/End: Original strand, 14055682 - 14055805
Alignment:
Q  10 aaatgaagagattatacatagtaactgttgagactgatgagatagtggagactatattcttttgatatttatttaatgtgcatgcttttccctgttattt 109  Q
    ||||||||| || |||||||||||||||||||| | |||||||||||||||||||||| ||||| |||||||||||||||||||||||||| | |||||     
T  14055682 aaatgaagatatcatacatagtaactgttgagaatcatgagatagtggagactatattattttggtatttatttaatgtgcatgcttttccatattatta 14055781  T
Q  110 tattatggcaggatttctcacccc 133  Q
    | |||| || ||||||||||||||    
T  14055782 tgttattgctggatttctcacccc 14055805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 7 - 133
Target Start/End: Original strand, 13927623 - 13927749
Alignment:
Q  7 gtgaaatgaagagattatacatagtaactgttgagactgatgagatagtggagactatattcttttgatatttatttaatgtgcatgcttttccctgtta 106  Q
    ||||||||||||||||||||||| |||||||||||| |||||||| ||||  || ||||||||||||||||||| ||||||||| || |||||||| |||    
T  13927623 gtgaaatgaagagattatacataataactgttgagagtgatgagacagtgtggattatattcttttgatatttaattaatgtgcgtgtttttccctatta 13927722  T
Q  107 ttttattatggcaggatttctcacccc 133  Q
    || | ||||| || |||||||||||||    
T  13927723 ttatgttatgacaagatttctcacccc 13927749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 13 - 133
Target Start/End: Original strand, 16363225 - 16363344
Alignment:
Q  13 tgaagagattatacatagtaactgttgagactgatgagatagtggagactatattcttttgatatttatttaatgtgcatgcttttccctgttattttat 112  Q
    |||||||||||||||||||||||| |||||  |||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| |  || | | |    
T  16363225 tgaagagattatacatagtaactgctgagagagatgagatagtggagactatattccttttatatttatttaatgtgcatgcttttcc-taataatatgt 16363323  T
Q  113 tatggcaggatttctcacccc 133  Q
    |||||| ||||||||||||||    
T  16363324 tatggctggatttctcacccc 16363344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 10 - 133
Target Start/End: Original strand, 13929364 - 13929487
Alignment:
Q  10 aaatgaagagattatacatagtaactgttgagactgatgagatagtggagactatattcttttgatatttatttaatgtgcatgcttttccctgttattt 109  Q
    |||||||| ||||||||||| ||| |||||||| |||||||| ||||  || ||||||||||||||||||| ||||||||| || |||||||| |||||     
T  13929364 aaatgaagggattatacataataattgttgagagtgatgagacagtgtggattatattcttttgatatttaattaatgtgcttgtttttccctattatta 13929463  T
Q  110 tattatggcaggatttctcacccc 133  Q
    | |||||  |||||||||||||||    
T  13929464 tgttatgataggatttctcacccc 13929487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 7 - 77
Target Start/End: Complemental strand, 21974732 - 21974662
Alignment:
Q  7 gtgaaatgaagagattatacatagtaactgttgagactgatgagatagtggagactatattcttttgatat 77  Q
    |||| ||||||||||||||| |||||||||||||||  ||||||||||||||||||||||| |||| ||||    
T  21974732 gtgatatgaagagattatacgtagtaactgttgagagagatgagatagtggagactatattatttttatat 21974662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 7 - 77
Target Start/End: Complemental strand, 21997163 - 21997093
Alignment:
Q  7 gtgaaatgaagagattatacatagtaactgttgagactgatgagatagtggagactatattcttttgatat 77  Q
    |||| ||||||||||||||| |||||||||||||||  ||||||||||||||||||||||| |||| ||||    
T  21997163 gtgatatgaagagattatacgtagtaactgttgagagagatgagatagtggagactatattatttttatat 21997093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 14 - 89
Target Start/End: Complemental strand, 17790403 - 17790328
Alignment:
Q  14 gaagagattatacatagtaactgttgagactgatgagatagtggagactatattcttttgatatttatttaatgtg 89  Q
    ||||||||||| |||| |||||||||||| ||| || || ||||||| |||||| |||||||||||||||||||||    
T  17790403 gaagagattatgcataataactgttgagagtgaagatatggtggagattatattattttgatatttatttaatgtg 17790328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 14 - 89
Target Start/End: Complemental strand, 19098845 - 19098770
Alignment:
Q  14 gaagagattatacatagtaactgttgagactgatgagatagtggagactatattcttttgatatttatttaatgtg 89  Q
    ||||||||||| |||| |||||||||||| ||| || || ||||||| |||||| |||||||||||||||||||||    
T  19098845 gaagagattatgcataataactgttgagagtgaagatatggtggagattatattattttgatatttatttaatgtg 19098770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 7 - 77
Target Start/End: Complemental strand, 22159300 - 22159232
Alignment:
Q  7 gtgaaatgaagagattatacatagtaactgttgagactgatgagatagtggagactatattcttttgatat 77  Q
    |||| ||||||||||||||||||||||||  |||||  |||||||||||||||||||||||||||| ||||    
T  22159300 gtgatatgaagagattatacatagtaactactgaga--gatgagatagtggagactatattctttttatat 22159232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 7 - 133
Target Start/End: Original strand, 14482203 - 14482329
Alignment:
Q  7 gtgaaatgaagagattatacatagtaactgttgagactgatgagatagtggagactatattcttttgatatttatttaatgtgcatgcttttccctgtta 106  Q
    |||||| ||||||||||| |||| |||||||||| | ||| || || ||| ||| |||||| | |||||||||||||||| ||  || |||||||| |||    
T  14482203 gtgaaaagaagagattatgcataataactgttgacagtgaagatatggtgaagattatattatcttgatatttatttaatatgtgtgtttttccctatta 14482302  T
Q  107 ttttattatggcaggatttctcacccc 133  Q
    ||   ||||| ||| ||||||||||||    
T  14482303 ttacgttatgacagaatttctcacccc 14482329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 108; Significance: 2e-54; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 10 - 133
Target Start/End: Complemental strand, 130250 - 130127
Alignment:
Q  10 aaatgaagagattatacatagtaactgttgagactgatgagatagtggagactatattcttttgatatttatttaatgtgcatgcttttccctgttattt 109  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||    
T  130250 aaatgaagagattatacatagtaactgttgagaatgatgagatagtggagactatattcttttgatatttatttaatgtgcatgctttttcctattattt 130151  T
Q  110 tattatggcaggatttctcacccc 133  Q
    | ||||||||||||||||||||||    
T  130150 tgttatggcaggatttctcacccc 130127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 107; Significance: 8e-54; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 10 - 132
Target Start/End: Original strand, 14980920 - 14981042
Alignment:
Q  10 aaatgaagagattatacatagtaactgttgagactgatgagatagtggagactatattcttttgatatttatttaatgtgcatgcttttccctgttattt 109  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||    
T  14980920 aaatgaagagattatacatagtaaatgttgagaatgatgagatagtggagactatattcttttgatatttatttaatgtgcatgcttttctctattattt 14981019  T
Q  110 tattatggcaggatttctcaccc 132  Q
    |||||||||||||||||||||||    
T  14981020 tattatggcaggatttctcaccc 14981042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 7 - 133
Target Start/End: Original strand, 8404414 - 8404539
Alignment:
Q  7 gtgaaatgaagagattatacatagtaactgttgagactgatgagatagtggagactatattcttttgatatttatttaatgtgcatgcttttccctgtta 106  Q
    |||||||||||||||||||||||||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |  ||    
T  8404414 gtgaaatgaagagattatacatagtaactgctgagagtgatgagatagtggagaccatattcttttgatatttatttaatgtgcatgcttttcc-tacta 8404512  T
Q  107 ttttattatggcaggatttctcacccc 133  Q
     | | ||||||| ||||||||||||||    
T  8404513 atatgttatggctggatttctcacccc 8404539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 8 - 133
Target Start/End: Original strand, 10907421 - 10907545
Alignment:
Q  8 tgaaatgaagagattatacatagtaactgttgagactgatgagatagtggagactatattcttttgatatttatttaatgtgcatgcttttccctgttat 107  Q
    ||||| ||||||||||| || | |||||||||||| ||| || || ||||||| |||||| ||| |||||||||||||| ||| ||||||||||| ||||    
T  10907421 tgaaaagaagagattatgcaaaataactgttgagagtgaagatattgtggagattatattattt-gatatttatttaatatgcgtgcttttccctattat 10907519  T
Q  108 tttattatggcaggatttctcacccc 133  Q
      | ||||||||||||||||||||||    
T  10907520 catgttatggcaggatttctcacccc 10907545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 8 - 100
Target Start/End: Original strand, 21038929 - 21039021
Alignment:
Q  8 tgaaatgaagagattatacatagtaactgttgagactgatgagatagtggagactatattcttttgatatttatttaatgtgcatgcttttcc 100  Q
    ||||||||||||||||||  ||||||||  ||  | |||| ||| |||||||||||||||||||| |||||||||||| || |||||||||||    
T  21038929 tgaaatgaagagattatatgtagtaactactggaagtgattagagagtggagactatattcttttaatatttatttaaagttcatgcttttcc 21039021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 8 - 130
Target Start/End: Original strand, 21083967 - 21084087
Alignment:
Q  8 tgaaatgaagagattatacatagtaactgttgagactgatgagatagtggagactatattcttttgatatttatttaatgtgcatgcttttccctgttat 107  Q
    ||||||||||||||||||  ||||||||   |||| |||| |||||||||||||||||||||||| |||||| ||||| || |||||| ||  || |||     
T  21083967 tgaaatgaagagattatatgtagtaactaccgagagtgattagatagtggagactatattcttttaatattt-tttaaagttcatgctctt-tctattaa 21084064  T
Q  108 tttattatggcaggatttctcac 130  Q
    ||| ||||||| |||||||||||    
T  21084065 tttgttatggctggatttctcac 21084087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 31 - 133
Target Start/End: Original strand, 10641977 - 10642079
Alignment:
Q  31 taactgttgagactgatgagatagtggagactatattcttttgatatttatttaatgtgcatgcttttccctgttattttattatggcaggatttctcac 130  Q
    |||||||||| | ||| || || ||||||| |||||| |||||||||||||||||| ||| || |||||||| ||||| | ||||| || |||||||| |    
T  10641977 taactgttgaaagtgaagatatggtggagattatattattttgatatttatttaatatgcgtgtttttccctattattatgttatgacaagatttctcgc 10642076  T
Q  131 ccc 133  Q
    |||    
T  10642077 ccc 10642079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 87
Target Start/End: Complemental strand, 977257 - 977177
Alignment:
Q  7 gtgaaatgaagagattatacatagtaactgttgagactgatgagatagtggagactatattctt-ttgatatttatttaatg 87  Q
    ||||||||||||||||||||||| | ||||||||||| |||| |||| ||||||  ||||| || |||||||||||||||||    
T  977257 gtgaaatgaagagattatacataatgactgttgagac-gatgtgataatggagatcatattattcttgatatttatttaatg 977177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0239 (Bit Score: 105; Significance: 1e-52; HSPs: 1)
Name: scaffold0239
Description:

Target: scaffold0239; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 13 - 133
Target Start/End: Original strand, 21799 - 21919
Alignment:
Q  13 tgaagagattatacatagtaactgttgagactgatgagatagtggagactatattcttttgatatttatttaatgtgcatgcttttccctgttattttat 112  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| |    
T  21799 tgaagagattatacatagtaactgttgagactgatgaaatagtggagactatattcttttgatatgtatttaatgtgcatgcttttccctattatttttt 21898  T
Q  113 tatggcaggatttctcacccc 133  Q
    |||||||||||||||||||||    
T  21899 tatggcaggatttctcacccc 21919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 104; Significance: 5e-52; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 10 - 133
Target Start/End: Original strand, 51659311 - 51659434
Alignment:
Q  10 aaatgaagagattatacatagtaactgttgagactgatgagatagtggagactatattcttttgatatttatttaatgtgcatgcttttccctgttattt 109  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||     
T  51659311 aaatgaagagattatacatagtaactgttgagaatgatgagatagtggagactatattcttttgatatttatttaatgtgcatgtttttccctattatta 51659410  T
Q  110 tattatggcaggatttctcacccc 133  Q
    | ||||||||||||||||||||||    
T  51659411 tgttatggcaggatttctcacccc 51659434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 10 - 132
Target Start/End: Original strand, 13882924 - 13883047
Alignment:
Q  10 aaatgaagagattatacatagtaactgttgagactgatgagatagtggagactatattcttttgatatttatttaatgtgcatgcttttccctgtta-tt 108  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||| ||    
T  13882924 aaatgaagagattatacatagtaattgttgagtctgatgagatagtggagactatattcttttgatatttatttaatgtgcatgtttttccctattattt 13883023  T
Q  109 ttattatggcaggatttctcaccc 132  Q
    ||||||||| ||||||||||||||    
T  13883024 ttattatggtaggatttctcaccc 13883047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 7 - 133
Target Start/End: Original strand, 1567333 - 1567459
Alignment:
Q  7 gtgaaatgaagagattatacatagtaactgttgagactgatgagatagtggagactatattcttttgatatttatttaatgtgcatgcttttccctgtta 106  Q
    ||||||||||||||||||||||| ||||| |||| | ||||| || ||| |  | ||||||||||| ||||||||||||||||||||  ||||||| |||    
T  1567333 gtgaaatgaagagattatacataataactattgatagtgatgcgacagtaggaattatattctttttatatttatttaatgtgcatgtgtttccctatta 1567432  T
Q  107 ttttattatggcaggatttctcacccc 133  Q
    || | |||| |||||||||||||||||    
T  1567433 ttatgttatagcaggatttctcacccc 1567459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 97; Significance: 8e-48; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 10 - 133
Target Start/End: Original strand, 28916 - 29037
Alignment:
Q  10 aaatgaagagattatacatagtaactgttgagactgatgagatagtggagactatattcttttgatatttatttaatgtgcatgcttttccctgttattt 109  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||  |||||||||||||||||||||||||||||||||||| ||||||    
T  28916 aaatgaagagattatacatagtaactgttgagaatgatgagatagtggagactat--tcttttgatatttatttaatgtgcatgcttttccctattattt 29013  T
Q  110 tattatggcaggatttctcacccc 133  Q
    | |||||| |||||||||||||||    
T  29014 tgttatggtaggatttctcacccc 29037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 95; Significance: 1e-46; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 10 - 132
Target Start/End: Complemental strand, 13839 - 13717
Alignment:
Q  10 aaatgaagagattatacatagtaactgttgagactgatgagatagtggagactatattcttttgatatttatttaatgtgcatgcttttccctgttattt 109  Q
    |||||||||||||||||||||||||| |||||| ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| ||||||    
T  13839 aaatgaagagattatacatagtaactattgagaatgatgagatagtggagaatgtattcttttgatatttatttaatgtgcatgcttttccctattattt 13740  T
Q  110 tattatggcaggatttctcaccc 132  Q
    | |||||||||||||||| ||||    
T  13739 tgttatggcaggatttcttaccc 13717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 79; Significance: 4e-37; HSPs: 8)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 7 - 133
Target Start/End: Original strand, 15873523 - 15873648
Alignment:
Q  7 gtgaaatgaagagattatacatagtaactgttgagactgatgagatagtggagactatattcttttgatatttatttaatgtgcatgcttttccctgtta 106  Q
    |||||||||||| ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |  ||    
T  15873523 gtgaaatgaagacattatacatagtaactgctgagagtgatgagatagtggagactatattcttttgatatttatttaatgtgaatgcttttcc-taata 15873621  T
Q  107 ttttattatggcaggatttctcacccc 133  Q
     | | ||||||| ||||||||||||||    
T  15873622 atatgttatggctggatttctcacccc 15873648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 7 - 133
Target Start/End: Complemental strand, 17335185 - 17335060
Alignment:
Q  7 gtgaaatgaagagattatacatagtaactgttgagactgatgagatagtggagactatattcttttgatatttatttaatgtgcatgcttttccctgtta 106  Q
    ||||||||| ||||||||| ||| |||||||||||| ||||| |||| |||||| ||||||||||||||||||||||||| ||  ||||||| ||| |||    
T  17335185 gtgaaatgaggagattatatataataactgttgagagtgatgggataatggagattatattcttttgatatttatttaat-tgtgtgctttttcctatta 17335087  T
Q  107 ttttattatggcaggatttctcacccc 133  Q
    || | |||||| |||||||| ||||||    
T  17335086 ttatgttatggaaggatttcccacccc 17335060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 7 - 130
Target Start/End: Original strand, 20874250 - 20874373
Alignment:
Q  7 gtgaaatgaagagattatacatagtaactgttgagactgatgagatagtggagactatattcttttgatatttatttaatgtgcatgcttttccctgtta 106  Q
    |||||| |||||||||||||||| ||| |||||||| ||||| |||||| |||| | |||||   ||| ||||||||||||||| || |||| ||| |||    
T  20874250 gtgaaaagaagagattatacataataattgttgagagtgatgcgatagtagagattgtattccaatgaaatttatttaatgtgcgtgttttttcctatta 20874349  T
Q  107 ttttattatggcaggatttctcac 130  Q
    || | | |||||||||||||||||    
T  20874350 ttatgtcatggcaggatttctcac 20874373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 14 - 133
Target Start/End: Complemental strand, 11555484 - 11555365
Alignment:
Q  14 gaagagattatacatagtaactgttgagactgatgagatagtggagactatattcttttgatatttatttaatgtgcatgcttttccctgttattttatt 113  Q
    |||||||||||  ||| ||| | |||||| ||| || || ||||| | |||||| |||||||||||||||||| ||| || |||||||| ||||| | ||    
T  11555484 gaagagattatgaataataattattgagagtgaagatatggtggaaattatattattttgatatttatttaatatgcgtgtttttccctattattatgtt 11555385  T
Q  114 atggcaggatttctcacccc 133  Q
    ||| ||||||||||||||||    
T  11555384 atgacaggatttctcacccc 11555365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 7 - 133
Target Start/End: Original strand, 16285674 - 16285800
Alignment:
Q  7 gtgaaatgaagagattatacatagtaactgttgagactgatgagatagtggagactatattcttttgatatttatttaatgtgcatgcttttccctgtta 106  Q
    |||||| ||||| ||||| |||| |||| |||| || ||| || || ||||||| ||| || |||||||||||||||||| ||| || |||||||| ||     
T  16285674 gtgaaaagaagatattatgcataataaccgttgggagtgaagatatggtggagattattttattttgatatttatttaatatgcgtgtttttccctattc 16285773  T
Q  107 ttttattatggcaggatttctcacccc 133  Q
    || | |||||| |||||||||||||||    
T  16285774 ttatgttatggtaggatttctcacccc 16285800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 7 - 133
Target Start/End: Complemental strand, 12228504 - 12228379
Alignment:
Q  7 gtgaaatgaagagattatacatagtaactgttgagactgatgagatagtggagactatattcttttgatatttatttaatgtgcatgcttttccctgtta 106  Q
    |||||| ||||||||||| | || |||||||||||| ||| || || |||| || ||| || ||||| |||||||||||  ||| ||||||||||| |||    
T  12228504 gtgaaaagaagagattatgcgtaataactgttgagagtgaagatatggtgg-gattattttattttgttatttatttaacatgcgtgcttttccctatta 12228406  T
Q  107 ttttattatggcaggatttctcacccc 133  Q
    || | ||||| |||||||| |||||||    
T  12228405 ttatgttatgtcaggatttatcacccc 12228379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 133
Target Start/End: Complemental strand, 9563862 - 9563751
Alignment:
Q  22 tatacatagtaactgttgagactgatgagatagtggagactatattcttttgatatttatttaatgtgcatgcttttccctgttattttattatggcagg 121  Q
    |||| ||| |||| ||||||| ||||| |||  |||| | | ||||||||  |||| |||||| ||||||||  ||||| | ||||| | ||||||||||    
T  9563862 tatatataataaccgttgagaatgatgtgatgatggaaattttattctttctatatgtatttattgtgcatgtgtttccatattattatgttatggcagg 9563763  T
Q  122 atttctcacccc 133  Q
    ||||||||||||    
T  9563762 atttctcacccc 9563751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 37
Target Start/End: Complemental strand, 12136595 - 12136565
Alignment:
Q  7 gtgaaatgaagagattatacatagtaactgt 37  Q
    |||||||||||||||||||||||||||||||    
T  12136595 gtgaaatgaagagattatacatagtaactgt 12136565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0385 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 7 - 133
Target Start/End: Complemental strand, 13715 - 13590
Alignment:
Q  7 gtgaaatgaagagattatacatagtaactgttgagactgatgagatagtggagactatattcttttgatatttatttaatgtgcatgcttttccctgtta 106  Q
    |||| ||||||||||||||||||||||||| |||||  |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |  ||    
T  13715 gtgatatgaagagattatacatagtaactgctgagagagatgagatagtggagactatattctttttatatttatttaatgtgcatgcttttcc-taata 13617  T
Q  107 ttttattatggcaggatttctcacccc 133  Q
     | | ||||||| ||||||||||||||    
T  13616 atatgttatggctggatttctcacccc 13590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 59; Significance: 4e-25; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 7 - 133
Target Start/End: Original strand, 23661450 - 23661576
Alignment:
Q  7 gtgaaatgaagagattatacatagtaactgttgagactgatgagatagtggagactatattcttttgatatttatttaatgtgcatgcttttccctgtta 106  Q
    |||||| ||||||||||| |||| |||||||||||| ||| || || ||  ||| |||||| |||||||||||||||||| ||| | ||||||||| |||    
T  23661450 gtgaaaagaagagattatgcataataactgttgagagtgaagatatggtaaagattatattattttgatatttatttaatatgcgttcttttccctatta 23661549  T
Q  107 ttttattatggcaggatttctcacccc 133  Q
    || | ||||||||||||||||||||||    
T  23661550 ttatgttatggcaggatttctcacccc 23661576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 7 - 131
Target Start/End: Complemental strand, 24786196 - 24786072
Alignment:
Q  7 gtgaaatgaagagattatacatagtaactgttgagactgatgagatagtggagactatattcttttgatatttatttaatgtgcatgcttttccctgtta 106  Q
    |||||| ||||||||||||||||  ||||||||||| ||| || || ||||||| |||||| || |||||||||||| || ||  || |||||||  |||    
T  24786196 gtgaaaagaagagattatacataaaaactgttgagagtgaagatatggtggagattatattattctgatatttatttgatatgtgtgtttttcccaatta 24786097  T
Q  107 ttttattatggcaggatttctcacc 131  Q
    || | ||||||||||||||||||||    
T  24786096 ttatgttatggcaggatttctcacc 24786072  T

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Target: chr2; HSP #3
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 7 - 133
Target Start/End: Original strand, 44587040 - 44587166
Alignment:
Q  7 gtgaaatgaagagattatacatagtaactgttgagactgatgagatagtggagactatattcttttgatatttatttaatgtgcatgcttttccctgtta 106  Q
    |||||| ||||||||||  |||| || |  |||||| |||||| || ||||||| |||||| |||||||| ||||||||| ||  || |||||||| |||    
T  44587040 gtgaaaagaagagattaagcataatacccattgagagtgatgatatggtggagattatattattttgataattatttaatatgtgtgtttttccctatta 44587139  T
Q  107 ttttattatggcaggatttctcacccc 133  Q
    |||| |||||||||||||| |||||||    
T  44587140 ttttgttatggcaggatttatcacccc 44587166  T

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Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 98
Target Start/End: Original strand, 32252719 - 32252809
Alignment:
Q  7 gtgaaatgaagagattatacatagtaactgttgagactgatgagatagtggagactatattcttttgatatttatttaatgtgcatgctttt 98  Q
    ||||||||||||||||||| || || |||||||||  ||| ||||| || |||| |||||||  |||||||||||||||||||  |||||||    
T  32252719 gtgaaatgaagagattatatatggtgactgttgagggtgaagagatggtagagattatattc-cttgatatttatttaatgtgtgtgctttt 32252809  T

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Target: chr5 (Bit Score: 48; Significance: 1e-18; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 22 - 133
Target Start/End: Complemental strand, 24562709 - 24562598
Alignment:
Q  22 tatacatagtaactgttgagactgatgagatagtggagactatattcttttgatatttatttaatgtgcatgcttttccctgttattttattatggcagg 121  Q
    |||||||  |||| ||||||| ||||| |||||| || | | ||||| | ||| ||||||||||||||| ||||||||||| ||||| | ||||||||||    
T  24562709 tatacatgataaccgttgagagtgatgcgatagtagaaattgtattcctatgaaatttatttaatgtgcgtgcttttccctattattatgttatggcagg 24562610  T
Q  122 atttctcacccc 133  Q
    ||||||||||||    
T  24562609 atttctcacccc 24562598  T

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Target: chr5; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 22 - 133
Target Start/End: Complemental strand, 24603743 - 24603632
Alignment:
Q  22 tatacatagtaactgttgagactgatgagatagtggagactatattcttttgatatttatttaatgtgcatgcttttccctgttattttattatggcagg 121  Q
    |||||||  |||| ||||||| ||||| |||||| || | | ||||| | ||| ||||||||||||||| ||||||||||| ||||| | ||||||||||    
T  24603743 tatacatgataaccgttgagagtgatgcgatagtagaaattgtattcctatgaaatttatttaatgtgcgtgcttttccctattattatgttatggcagg 24603644  T
Q  122 atttctcacccc 133  Q
    ||||||||||||    
T  24603643 atttctcacccc 24603632  T

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Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 17 - 133
Target Start/End: Original strand, 24832626 - 24832742
Alignment:
Q  17 gagattatacatagtaactgttgagactgatgagatagtggagactatattcttttgatatttatttaatgtgcatgcttttccctgttattttattatg 116  Q
    ||||||||  ||| |||||||||||| ||| || || ||||||| |||||| | |||||||| ||||||| ||   | |||||||| ||||| | |||||    
T  24832626 gagattatgtataataactgttgagagtgaagatatggtggagattatattatcttgatattgatttaatatgtgcgtttttccctattattatgttatg 24832725  T
Q  117 gcaggatttctcacccc 133  Q
    |||||||||||||||||    
T  24832726 gcaggatttctcacccc 24832742  T

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Target: scaffold0145 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0145
Description:

Target: scaffold0145; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 7 - 133
Target Start/End: Complemental strand, 12042 - 11916
Alignment:
Q  7 gtgaaatgaagagattatacatagtaactgttgagactgatgagatagtggagactatattcttttgatatttatttaatgtgcatgcttttccctgtta 106  Q
    |||||| ||||| ||||| |||| |||| |||| || ||| || || ||||||| ||| || |||||||||||||||||| ||| || |||||||| ||     
T  12042 gtgaaaagaagatattatgcataataaccgttgggagtgaagatatggtggagattattttattttgatatttatttaatatgcgtgtttttccctattc 11943  T
Q  107 ttttattatggcaggatttctcacccc 133  Q
    || | |||||| |||||||||||||||    
T  11942 ttatgttatggtaggatttctcacccc 11916  T

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Target: chr8 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 62 - 133
Target Start/End: Complemental strand, 24505574 - 24505503
Alignment:
Q  62 tatattcttttgatatttatttaatgtgcatgcttttccctgttattttattatggcaggatttctcacccc 133  Q
    |||||| |||||||||||||||||| ||||||||||| ||| ||||| | ||||   |||||||||||||||    
T  24505574 tatattattttgatatttatttaatatgcatgctttttcctattattatgttattataggatttctcacccc 24505503  T

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Target: chr8; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 38
Target Start/End: Complemental strand, 23658040 - 23658012
Alignment:
Q  10 aaatgaagagattatacatagtaactgtt 38  Q
    |||||||||||||||||||||||||||||    
T  23658040 aaatgaagagattatacatagtaactgtt 23658012  T

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