View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16149_high_25 (Length: 295)
Name: NF16149_high_25
Description: NF16149
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16149_high_25 |
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Alignment Details
Target: chr3 (Bit Score: 272; Significance: 1e-152; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 272; E-Value: 1e-152
Query Start/End: Original strand, 1 - 276
Target Start/End: Complemental strand, 45467148 - 45466873
Alignment:
| Q |
1 |
aaaaatcaaaaatatcagtcctagtaatagcagcagcaatatcatttttctgaagagttcgtcgtttattctcttcagcatgaagccaagaacgaatggt |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45467148 |
aaaaatcaaaaatatcagtcctagtaatagcagcagcaatatcatttttctgaagagttcgtcgtttattctcttcagcatgaagccaagaacgaatggt |
45467049 |
T |
|
| Q |
101 |
gagttcaagaatgaaaagctcacaagctttagcaaagagaattggtgcttctgcagaaatcatgcgaacgtcttcatcagctttcatgattttcttaatg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45467048 |
gagttcaagaatgaaaagctcacaagctttagcaaagagaattggtgcttctgcagaaatcatgcgaacgtcttcatcagctttcatgattttcttaatg |
45466949 |
T |
|
| Q |
201 |
cgtgctaatggaagttgatggtttttgaaatcattgacgtgttcgatttcttgacgttggtaggaccagaacattt |
276 |
Q |
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||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45466948 |
cgtgctaatggaagttgatggtttttgaagtcattgacgtgttcgatttcttgacgttggtaggaccagaacattt |
45466873 |
T |
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Target: chr7 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 46851634 - 46851686
Alignment:
| Q |
3 |
aaatcaaaaatatcagtcctagtaatagcagcagcaatatcatttttctgaag |
55 |
Q |
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|||||||| |||||||||||||| || ||||||||||||||||| |||||||| |
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| T |
46851634 |
aaatcaaagatatcagtcctagtgattgcagcagcaatatcattcttctgaag |
46851686 |
T |
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