View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16149_high_43 (Length: 208)
Name: NF16149_high_43
Description: NF16149
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16149_high_43 |
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Alignment Details
Target: chr5 (Bit Score: 176; Significance: 5e-95; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 176; E-Value: 5e-95
Query Start/End: Original strand, 18 - 193
Target Start/End: Original strand, 7715811 - 7715986
Alignment:
| Q |
18 |
ataattgtgttgtttgttttatactactccacatgacatttctaataaaaatatgttgaatacatttgcatgcatgcagtataagaaatccttccacgat |
117 |
Q |
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| T |
7715811 |
ataattgtgttgtttgttttatactactccacatgacatttctaataaaaatatgttgaatacatttgcatgcatgcagtataagaaatccttccacgat |
7715910 |
T |
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| Q |
118 |
acccacgtggcatcttggtatatgttatttttgtgtagcactttggttgatgatattatagaatttggatcctttg |
193 |
Q |
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| T |
7715911 |
acccacgtggcatcttggtatatgttatttttgtgtagcactttggttgatgatattatagaatttggatcctttg |
7715986 |
T |
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