View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16149_low_29 (Length: 302)
Name: NF16149_low_29
Description: NF16149
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16149_low_29 |
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Alignment Details
Target: chr2 (Bit Score: 268; Significance: 1e-149; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 11 - 286
Target Start/End: Original strand, 3898655 - 3898930
Alignment:
| Q |
11 |
aagaatatatgcagatggaacagctgacaaagccaaagaaacggtgaacgcaggcatagatgacatcaaacaatttggacaagatgcaaatgaaaagaca |
110 |
Q |
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| T |
3898655 |
aagaatatatgcagatggaacagctgacaaagccaaagaaacggtgaacgcaggcatagatgacatcaaacaatttggacaagatgcaaatgaaaagaca |
3898754 |
T |
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| Q |
111 |
aaggacgctgcgagttcaattgcggataaagcaaaagaagacacagacaaggctgttgaggcagtagggagtgctggagataaggttaaagattatgctt |
210 |
Q |
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| T |
3898755 |
aaggacgctgcaagttcaattgcggataaagcaaaagaagacacagacaaggctgttgaggcagtagggagtgctggagataaggtaaaagattatgctt |
3898854 |
T |
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| Q |
211 |
atgatgcaaatgacaaaaccaaggaagcaataggttctgctactgataaggcaaaagaaggatttgaggcagcaac |
286 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3898855 |
atgatgcaaatgacaaaaccaaggaagcaataggttctgctactgataaggcaaaagaaggatttgaggcagcaac |
3898930 |
T |
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