View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF16149_low_31 (Length: 293)
Name: NF16149_low_31
Description: NF16149
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16149_low_31 |
 | |
|
| [»] chr3 (13 HSPs) |
| |
|
| [»] scaffold0425 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 269; Significance: 1e-150; HSPs: 13)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 1 - 293
Target Start/End: Original strand, 5298968 - 5299260
Alignment:
| Q |
1 |
agcgctcccaacattccgcactaccgttccagacatcatccaaaacaagcagatatttctttcctgttagtctctgctgcaattgatgttggagtagatt |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
5298968 |
agcgctcccaacattccgcactaccgttccagacatcatccaaaacaagcagatatttctttcctgttagtctctgctgcaattgatgttggagtagatt |
5299067 |
T |
|
| Q |
101 |
caagtcttcaccatcagccaaagagtgaaatgaccgcaaaattgctttggtaagtccaacaacattgaaagtttccgaaacatagacccaggcttttagt |
200 |
Q |
| |
|
||||||||||||||| ||| |||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
5299068 |
caagtcttcaccatctgccgaagagtgaaatgaccgtaaaattgctttggtaagtccaacaacattaaaagtttccgaaacatagacccaggcttttagt |
5299167 |
T |
|
| Q |
201 |
tcaaactgtttctgcatcatgttgttattgtacacaagttgagcaagggtggtttttcccattccacctagacccaccatgctgattattggt |
293 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
5299168 |
tcaaactgtttctgtatcatgttgttattgtacacaagttgagcaagggtggtttttcccattccacctagacccactatgctgattattggt |
5299260 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 1 - 293
Target Start/End: Original strand, 5250406 - 5250698
Alignment:
| Q |
1 |
agcgctcccaacattccgcactaccgttccagacatcatccaaaacaagcagatatttctttcctgttagtctctgctgcaattgatgttggagtagatt |
100 |
Q |
| |
|
||||||||||||||||| |||| || ||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||| ||||| |||||||||||| |
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|
| T |
5250406 |
agcgctcccaacattccacactcccattccagacatcatccaaaacaagaagatatttcttacctgttagtctctgccgcagttgatattggagtagatt |
5250505 |
T |
|
| Q |
101 |
caagtcttcaccatcagccaaagagtgaaatgaccgcaaaattgctttggtaagtccaacaacattgaaagtttccgaaacatagacccaggcttttagt |
200 |
Q |
| |
|
|| |||||| |||| | ||||||||||||| | || |||||||||||| ||||||||||||| |||||||| |||||||||||||| ||||| ||| |
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|
| T |
5250506 |
gaactcttcagcatctgttgaagagtgaaatgagctcataattgctttggtgagtccaacaacatcaaaagtttctgaaacatagacccaagctttaagt |
5250605 |
T |
|
| Q |
201 |
tcaaactgtttctgcatcatgttgttattgtacacaagttgagcaagggtggtttttcccattccacctagacccaccatgctgattattggt |
293 |
Q |
| |
|
||||| || | ||||||| ||| || |||||| |||| |||||||| ||||| || ||||||||||| |||||||| ||||||||||||||| |
|
|
| T |
5250606 |
tcaaaatgctcctgcatcctgtggtcgttgtacgcaagctgagcaagagtggtcttacccattccaccgagacccactatgctgattattggt |
5250698 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 1 - 293
Target Start/End: Complemental strand, 4388729 - 4388437
Alignment:
| Q |
1 |
agcgctcccaacattccgcactaccgttccagacatcatccaaaacaagcagatatttctttcctgttagtctctgctgcaattgatgttggagtagatt |
100 |
Q |
| |
|
|||||||||||| |||| || | || |||||||||||||| |||||||||| ||||||||| || |||||| | |||||||||||||||||||| ||||| |
|
|
| T |
4388729 |
agcgctcccaaccttcctcattcccattccagacatcatctaaaacaagcaaatatttcttaccagttagtttgtgctgcaattgatgttggagcagatt |
4388630 |
T |
|
| Q |
101 |
caagtcttcaccatcagccaaagagtgaaatgaccgcaaaattgctttggtaagtccaacaacattgaaagtttccgaaacatagacccaggcttttagt |
200 |
Q |
| |
|
|| |||||| ||| | ||||||||||||||| || |||||||||||||||||||||||||| |||||||| ||||| |||||||| ||||| ||| |
|
|
| T |
4388629 |
aaactcttcagcatgtgttgaagagtgaaatgacctcagaattgctttggtaagtccaacaacatcaaaagtttctgaaacgtagacccaagctttaagt |
4388530 |
T |
|
| Q |
201 |
tcaaactgtttctgcatcatgttgttattgtacacaagttgagcaagggtggtttttcccattccacctagacccaccatgctgattattggt |
293 |
Q |
| |
|
||||| || | | |||| || || |||||||||||| |||||||| ||||| || ||||||||||| |||||||| ||||||||||||||| |
|
|
| T |
4388529 |
tcaaaatgctctttcatcctgcggtcattgtacacaagctgagcaagagtggtcttacccattccaccgagacccactatgctgattattggt |
4388437 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 1 - 293
Target Start/End: Original strand, 5268293 - 5268585
Alignment:
| Q |
1 |
agcgctcccaacattccgcactaccgttccagacatcatccaaaacaagcagatatttctttcctgttagtctctgctgcaattgatgttggagtagatt |
100 |
Q |
| |
|
|||||||||||||||| |||| || ||||||||||||||||||| ||||| |||||||| |||||||||| ||||||||| ||||||||||||| ||| |
|
|
| T |
5268293 |
agcgctcccaacattcttcactcccattccagacatcatccaaaaaaagcaagtatttcttgcctgttagtccctgctgcaactgatgttggagtaaatt |
5268392 |
T |
|
| Q |
101 |
caagtcttcaccatcagccaaagagtgaaatgaccgcaaaattgctttggtaagtccaacaacattgaaagtttccgaaacatagacccaggcttttagt |
200 |
Q |
| |
|
||||||||||||||| || || ||| |||||||| || ||||||||| |||||||| | | ||| ||| ||||||||||||||||||||||||| || |
|
|
| T |
5268393 |
caagtcttcaccatctgctgaaaagtcaaatgacctcagaattgctttagtaagtccgagaccatcaaaaatttccgaaacatagacccaggctttatgt |
5268492 |
T |
|
| Q |
201 |
tcaaactgtttctgcatcatgttgttattgtacacaagttgagcaagggtggtttttcccattccacctagacccaccatgctgattattggt |
293 |
Q |
| |
|
| ||| | | || ||| | | || ||||||||| ||||||||||||||||| || ||||||||||| |||||||| ||||||||||||||| |
|
|
| T |
5268493 |
ttaaaattctccttgatcctttggtcattgtacacgagttgagcaagggtggtcttacccattccaccgagacccactatgctgattattggt |
5268585 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 4 - 292
Target Start/End: Original strand, 8589969 - 8590257
Alignment:
| Q |
4 |
gctcccaacattccgcactaccgttccagacatcatccaaaacaagcagatatttctttcctgttagtctctgctgcaattgatgttggagtagattcaa |
103 |
Q |
| |
|
||||||||||||| ||| | |||||||||| ||| || |||||||||| |||||||| ||||||||| | ||||||||||||||||||||||||||||| |
|
|
| T |
8589969 |
gctcccaacattctgcattcccgttccagatatcgtctaaaacaagcaagtatttcttgcctgttagtatgtgctgcaattgatgttggagtagattcaa |
8590068 |
T |
|
| Q |
104 |
gtcttcaccatcagccaaagagtgaaatgaccgcaaaattgctttggtaagtccaacaacattgaaagtttccgaaacatagacccaggcttttagttca |
203 |
Q |
| |
|
|||||||||||| || |||| | |||||| | |||||||||||| ||||||||||||| |||| ||| |||||||||||||| ||||| || ||| |
|
|
| T |
8590069 |
gtcttcaccatctgctgaagaattaaatgaattgataattgctttggtgagtccaacaacatcaaaagattcagaaacatagacccatgctttaagctca |
8590168 |
T |
|
| Q |
204 |
aactgtttctgcatcatgttgttattgtacacaagttgagcaagggtggtttttcccattccacctagacccaccatgctgattattgg |
292 |
Q |
| |
|
|| || | | ||| |||||| ||||||||||| | ||||||||||||||| ||||| || |||| ||| || |||||||||||||| |
|
|
| T |
8590169 |
aaatgctcttctatcttgttgtcgttgtacacaagcttagcaagggtggttttccccatccctcctaaaccgactatgctgattattgg |
8590257 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 4 - 292
Target Start/End: Original strand, 6947509 - 6947797
Alignment:
| Q |
4 |
gctcccaacattccgcactaccgttccagacatcatccaaaacaagcagatatttctttcctgttagtctctgctgcaattgatgttggagtagattcaa |
103 |
Q |
| |
|
||||||||||||| ||| |||||||||| |||||| |||||||||| ||||||||||| ||| | || || | ||||||||||||||||||||| |
|
|
| T |
6947509 |
gctcccaacattctgcatccccgttccagatatcatctaaaacaagcaagtatttctttcccattaacatgtgttggagttgatgttggagtagattcaa |
6947608 |
T |
|
| Q |
104 |
gtcttcaccatcagccaaagagtgaaatgaccgcaaaattgctttggtaagtccaacaacattgaaagtttccgaaacatagacccaggcttttagttca |
203 |
Q |
| |
|
|||||||||||| || |||| | ||||||| | |||||||||||| ||||||||||||| |||| ||| ||||| |||||||| | ||| || ||| |
|
|
| T |
6947609 |
gtcttcaccatctgctgaagaattaaatgacttgagaattgctttggtgagtccaacaacatcaaaagattctgaaacgtagacccatgttttaaggtca |
6947708 |
T |
|
| Q |
204 |
aactgtttctgcatcatgttgttattgtacacaagttgagcaagggtggtttttcccattccacctagacccaccatgctgattattgg |
292 |
Q |
| |
|
|| || | || ||| |||||| |||||||||||| | ||||||||||||||| ||||| || |||| |||||| |||||||||||||| |
|
|
| T |
6947709 |
aaatgctcctctatcttgttgtcattgtacacaagcttagcaagggtggttttccccatccctcctaaacccactatgctgattattgg |
6947797 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 4 - 292
Target Start/End: Original strand, 6736230 - 6736518
Alignment:
| Q |
4 |
gctcccaacattccgcactaccgttccagacatcatccaaaacaagcagatatttctttcctgttagtctctgctgcaattgatgttggagtagattcaa |
103 |
Q |
| |
|
|||||||| |||| |||| || ||||||| |||||| |||||||||| ||||||||||| ||| | || || | ||||||||||||| ||||||| |
|
|
| T |
6736230 |
gctcccaatattctacactcccattccagatatcatctaaaacaagcaagtatttctttcccattaacatgtgttggagttgatgttggagttgattcaa |
6736329 |
T |
|
| Q |
104 |
gtcttcaccatcagccaaagagtgaaatgaccgcaaaattgctttggtaagtccaacaacattgaaagtttccgaaacatagacccaggcttttagttca |
203 |
Q |
| |
|
|||||||||||| || ||| | ||||||| | |||||||||||| ||||||| ||||| ||||| ||| |||||||||||||| ||||| |||||| |
|
|
| T |
6736330 |
gtcttcaccatctgctgaaggattaaatgacttgagaattgctttggtgagtccaaaaacatcgaaagattctgaaacatagacccatgctttaagttca |
6736429 |
T |
|
| Q |
204 |
aactgtttctgcatcatgttgttattgtacacaagttgagcaagggtggtttttcccattccacctagacccaccatgctgattattgg |
292 |
Q |
| |
|
|| || |||| ||| |||||| ||||||||||| | ||||||||||||||| ||||| || |||| |||||| ||||| |||||||| |
|
|
| T |
6736430 |
aaatgcttctttatcttgttgtcgttgtacacaagcttagcaagggtggttttccccatccctcctaaacccactatgctaattattgg |
6736518 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 5 - 292
Target Start/End: Original strand, 8454895 - 8455182
Alignment:
| Q |
5 |
ctcccaacattccgcactaccgttccagacatcatccaaaacaagcagatatttctttcctgttagtctctgctgcaattgatgttggagtagattcaag |
104 |
Q |
| |
|
|||||||| ||||||| |||||||||| ||| || |||||||||| ||||||||| || |||| | | || | |||||||||||||||||| ||| |
|
|
| T |
8454895 |
ctcccaacgttccgcatccccgttccagatatcgtctaaaacaagcaaatatttcttgcccattagcatgtattggagttgatgttggagtagatttaag |
8454994 |
T |
|
| Q |
105 |
tcttcaccatcagccaaagagtgaaatgaccgcaaaattgctttggtaagtccaacaacattgaaagtttccgaaacatagacccaggcttttagttcaa |
204 |
Q |
| |
|
||||||||||| || |||| | ||| ||| | |||||||||||| ||||||||||||| |||| ||| |||||||||||||| ||||| ||||||| |
|
|
| T |
8454995 |
tcttcaccatctgctgaagaattaaacgacttgagaattgctttggtgagtccaacaacatcaaaagattctgaaacatagacccatgctttaagttcaa |
8455094 |
T |
|
| Q |
205 |
actgtttctgcatcatgttgttattgtacacaagttgagcaagggtggtttttcccattccacctagacccaccatgctgattattgg |
292 |
Q |
| |
|
| || | || ||| |||||| |||||||||||| | ||||||||||||||| ||||| || |||| ||| || |||||||||||||| |
|
|
| T |
8455095 |
aatgctcctttatcttgttgtcattgtacacaagcttagcaagggtggttttacccatccctcctaaaccgactatgctgattattgg |
8455182 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 4 - 289
Target Start/End: Complemental strand, 6448571 - 6448286
Alignment:
| Q |
4 |
gctcccaacattccgcactaccgttccagacatcatccaaaacaagcagatatttctttcctgttagtctctgctgcaattgatgttggagtagattcaa |
103 |
Q |
| |
|
||||||||| ||| ||| | |||||||||| || || |||||||| | |||||||||| ||||||| | || |||| || |||||||||||||||||| |
|
|
| T |
6448571 |
gctcccaacgttctgcattcccgttccagatgtcgtctaaaacaagaaagtatttctttcttgttagtatgtgttgcagttcatgttggagtagattcaa |
6448472 |
T |
|
| Q |
104 |
gtcttcaccatcagccaaagagtgaaatgaccgcaaaattgctttggtaagtccaacaacattgaaagtttccgaaacatagacccaggcttttagttca |
203 |
Q |
| |
|
|||||||||||| || |||| | ||||||| | ||||||||||| ||||||||||||| ||| ||| |||||||||||||| | ||| |||||| |
|
|
| T |
6448471 |
gtcttcaccatctgctgaagaattaaatgactttaggattgctttggtgagtccaacaacatcaaaatattctgaaacatagacccaagatttaagttca |
6448372 |
T |
|
| Q |
204 |
aactgtttctgcatcatgttgttattgtacacaagttgagcaagggtggtttttcccattccacctagacccaccatgctgattat |
289 |
Q |
| |
|
|| || | || |||||||||| |||||||||||| | ||||| ||||| || ||||| ||||| |||||||| ||||||||||| |
|
|
| T |
6448371 |
aaatgctcctttatcatgttgtgattgtacacaagcttagcaaaagtggtcttacccatcccacccagacccactatgctgattat |
6448286 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 83 - 292
Target Start/End: Complemental strand, 6519872 - 6519663
Alignment:
| Q |
83 |
ttgatgttggagtagattcaagtcttcaccatcagccaaagagtgaaatgaccgcaaaattgctttggtaagtccaacaacattgaaagtttccgaaaca |
182 |
Q |
| |
|
||||||||||||| ||| ||||| ||||||||| || ||| | ||||||| | |||||||||||| ||||||||| ||| |||| ||| |||||| |
|
|
| T |
6519872 |
ttgatgttggagttgatccaagtattcaccatctgctgaaggattaaatgacttgagaattgctttggtgagtccaacatcatcaaaagattctgaaaca |
6519773 |
T |
|
| Q |
183 |
tagacccaggcttttagttcaaactgtttctgcatcatgttgttattgtacacaagttgagcaagggtggtttttcccattccacctagacccaccatgc |
282 |
Q |
| |
|
|||||||| ||||| |||||||| || |||| ||||||||| |||||| ||| ||||||||||||||||||| |||||||| |||| |||||| |||| |
|
|
| T |
6519772 |
tagacccatgctttaagttcaaaatgcttctttgtcatgttgtcattgtagacatgttgagcaagggtggttttacccattcctcctaaacccactatgc |
6519673 |
T |
|
| Q |
283 |
tgattattgg |
292 |
Q |
| |
|
|||||||||| |
|
|
| T |
6519672 |
tgattattgg |
6519663 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 4 - 292
Target Start/End: Complemental strand, 6554227 - 6553939
Alignment:
| Q |
4 |
gctcccaacattccgcactaccgttccagacatcatccaaaacaagcagatatttctttcctgttagtctctgctgcaattgatgttggagtagattcaa |
103 |
Q |
| |
|
|||||||| |||| |||| || ||||| | |||||| |||||||||| ||||||||||| |||| | | || | ||||||||||||| ||| ||| |
|
|
| T |
6554227 |
gctcccaatattctacactcccattccatatatcatctaaaacaagcaagtatttctttcccattagcatgtcttggagttgatgttggagttgatccaa |
6554128 |
T |
|
| Q |
104 |
gtcttcaccatcagccaaagagtgaaatgaccgcaaaattgctttggtaagtccaacaacattgaaagtttccgaaacatagacccaggcttttagttca |
203 |
Q |
| |
|
|| ||||||||| || ||| | ||||||| | |||||||||||| ||||||| ||||| ||||| ||| |||||||||||||| ||||| |||||| |
|
|
| T |
6554127 |
gtattcaccatctgctgaaggattaaatgacttgagaattgctttggtgagtccaaaaacatcgaaagattctgaaacatagacccatgctttaagttca |
6554028 |
T |
|
| Q |
204 |
aactgtttctgcatcatgttgttattgtacacaagttgagcaagggtggtttttcccattccacctagacccaccatgctgattattgg |
292 |
Q |
| |
|
|| || |||| ||| |||||| ||||||||||| | ||||||||||||||| ||||| || |||| |||||| |||||||||||||| |
|
|
| T |
6554027 |
aaatgcttctttatcttgttgtcgttgtacacaagcttagcaagggtggttttccccatccctcctaaacccactatgctgattattgg |
6553939 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 27 - 289
Target Start/End: Complemental strand, 6479748 - 6479486
Alignment:
| Q |
27 |
ttccagacatcatccaaaacaagcagatatttctttcctgttagtctctgctgcaattgatgttggagtagattcaagtcttcaccatcagccaaagagt |
126 |
Q |
| |
|
||||||| |||||| |||||||||| ||||||||||| ||| | || || | ||||||||||||| ||| ||||| ||||||||| || ||| | |
|
|
| T |
6479748 |
ttccagatatcatctaaaacaagcaagtatttctttcccattaacatgtgttggagttgatgttggagttgatccaagtattcaccatctgctgaaggat |
6479649 |
T |
|
| Q |
127 |
gaaatgaccgcaaaattgctttggtaagtccaacaacattgaaagtttccgaaacatagacccaggcttttagttcaaactgtttctgcatcatgttgtt |
226 |
Q |
| |
|
||||||| | |||||||||||| ||||||||||||| ||| ||| |||||||||||||| ||||| |||||||| |||| || ||| ||||||| |
|
|
| T |
6479648 |
taaatgacttgagaattgctttggtgagtccaacaacatcataagattctgaaacatagacccatgctttaagttcaaaatgttcctctatcttgttgtt |
6479549 |
T |
|
| Q |
227 |
attgtacacaagttgagcaagggtggtttttcccattccacctagacccaccatgctgattat |
289 |
Q |
| |
|
||||||||||| | ||||||||||||||| ||||| || |||| ||| || ||||||||||| |
|
|
| T |
6479548 |
gttgtacacaagcttagcaagggtggttttccccatccctcctaaaccaactatgctgattat |
6479486 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 4 - 277
Target Start/End: Complemental strand, 8568737 - 8568464
Alignment:
| Q |
4 |
gctcccaacattccgcactaccgttccagacatcatccaaaacaagcagatatttctttcctgttagtctctgctgcaattgatgttggagtagattcaa |
103 |
Q |
| |
|
|||||||| ||||| || | || ||||||| |||||| | |||||||| | | || || ||||||| | |||| || | |||| || |||| ||| ||| |
|
|
| T |
8568737 |
gctcccaaaattcctcattcccattccagatatcatctagaacaagcaaaaactttttgcctgttaatatctgttgtagttgacatttgagtggatccaa |
8568638 |
T |
|
| Q |
104 |
gtcttcaccatcagccaaagagtgaaatgaccgcaaaattgctttggtaagtccaacaacattgaaagtttccgaaacatagacccaggcttttagttca |
203 |
Q |
| |
|
||||||||| |||| | || |||||||||| | ||||| |||||| ||||||||||||| |||| ||| ||||||| |||||| ||||| |||||| |
|
|
| T |
8568637 |
gtcttcaccgtcagatgaggaatgaaatgacctgagaattgttttggtgagtccaacaacatcaaaagattctgaaacatggacccaagctttaagttca |
8568538 |
T |
|
| Q |
204 |
aactgtttctgcatcatgttgttattgtacacaagttgagcaagggtggtttttcccattccacctagacccac |
277 |
Q |
| |
|
|| || |||| ||| ||| || |||||| |||||| ||||||||||||| || ||||| |||||||||||||| |
|
|
| T |
8568537 |
aattgcttctctatcttgtggtcattgtagacaagtcgagcaagggtggtcttacccatcccacctagacccac |
8568464 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0425 (Bit Score: 85; Significance: 2e-40; HSPs: 1)
Name: scaffold0425
Description:
Target: scaffold0425; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 4 - 292
Target Start/End: Complemental strand, 7266 - 6978
Alignment:
| Q |
4 |
gctcccaacattccgcactaccgttccagacatcatccaaaacaagcagatatttctttcctgttagtctctgctgcaattgatgttggagtagattcaa |
103 |
Q |
| |
|
|||||||| |||| |||| || ||||| | |||||| |||||||||| ||||||||||| ||| | || || | ||||||||||||| ||||||| |
|
|
| T |
7266 |
gctcccaatattctacactcccattccatatatcatctaaaacaagcaagtatttctttcccattaacatgtgttggagttgatgttggagttgattcaa |
7167 |
T |
|
| Q |
104 |
gtcttcaccatcagccaaagagtgaaatgaccgcaaaattgctttggtaagtccaacaacattgaaagtttccgaaacatagacccaggcttttagttca |
203 |
Q |
| |
|
|||||||||||| || ||| | ||||||| | |||||||||||| ||||||| ||||| ||||| ||| |||||||||||||| ||||| |||||| |
|
|
| T |
7166 |
gtcttcaccatctgctgaaggattaaatgacttgagaattgctttggtgagtccaaaaacatcgaaagattctgaaacatagacccatgctttaagttca |
7067 |
T |
|
| Q |
204 |
aactgtttctgcatcatgttgttattgtacacaagttgagcaagggtggtttttcccattccacctagacccaccatgctgattattgg |
292 |
Q |
| |
|
|| || |||| ||| |||||| ||||||||||| | ||||||||||||||| ||||| || |||| |||||| |||||||||||||| |
|
|
| T |
7066 |
aaatgcttctttatcttgttgtctttgtacacaagcttagcaagggtggttttccccatccctcctaaacccactatgctgattattgg |
6978 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 92 - 291
Target Start/End: Complemental strand, 6572999 - 6572800
Alignment:
| Q |
92 |
gagtagattcaagtcttcaccatcagccaaagagtgaaatgaccgcaaaattgctttggtaagtccaacaacattgaaagtttccgaaacatagacccag |
191 |
Q |
| |
|
|||| ||| |||||||||||| || || ||||| || ||||||| | ||||| |||||| ||||||||| ||| || | || || |||| |||||| |
|
|
| T |
6572999 |
gagtggatccaagtcttcaccgtctgcaaaagaatggaatgacctaagaattgttttggtgagtccaacagcatcaaatgattttgagacatggacccaa |
6572900 |
T |
|
| Q |
192 |
gcttttagttcaaactgtttctgcatcatgttgttattgtacacaagttgagcaagggtggtttttcccattccacctagacccaccatgctgattattg |
291 |
Q |
| |
|
||||| || ||||||||||||| |||| | | || |||||| ||||| |||||||||||||| || ||||| ||||| | |||||| ||||||||||||| |
|
|
| T |
6572899 |
gctttaaggtcaaactgtttctccatcctctggtcattgtagacaagctgagcaagggtggtcttccccatcccacccaaacccactatgctgattattg |
6572800 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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