View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16149_low_32 (Length: 293)

Name: NF16149_low_32
Description: NF16149
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16149_low_32
NF16149_low_32
[»] chr1 (28 HSPs)
chr1 (240-293)||(39015562-39015615)
chr1 (240-292)||(15013746-15013798)
chr1 (253-293)||(1252143-1252183)
chr1 (240-293)||(7230008-7230061)
chr1 (240-293)||(24023453-24023506)
chr1 (240-293)||(34061942-34061995)
chr1 (240-292)||(34037919-34037971)
chr1 (242-293)||(50998392-50998443)
chr1 (243-293)||(15285330-15285380)
chr1 (247-293)||(47293361-47293407)
chr1 (256-293)||(4838326-4838363)
chr1 (256-293)||(15311560-15311597)
chr1 (256-293)||(17988292-17988329)
chr1 (256-293)||(21852452-21852489)
chr1 (240-293)||(27146112-27146165)
chr1 (256-293)||(34332963-34333000)
chr1 (256-293)||(34755020-34755057)
chr1 (240-293)||(40328960-40329013)
chr1 (256-293)||(43147462-43147499)
chr1 (256-293)||(47011259-47011296)
chr1 (240-293)||(47991776-47991829)
chr1 (244-293)||(50998307-50998356)
chr1 (253-293)||(3606273-3606313)
chr1 (253-293)||(9675891-9675931)
chr1 (237-293)||(12062190-12062246)
chr1 (237-293)||(12993520-12993576)
chr1 (253-293)||(39422075-39422115)
chr1 (254-286)||(52132805-52132837)
[»] chr7 (21 HSPs)
chr7 (230-293)||(11677027-11677090)
chr7 (237-293)||(11032391-11032447)
chr7 (237-291)||(45967687-45967741)
chr7 (252-292)||(32427729-32427769)
chr7 (241-293)||(45833190-45833242)
chr7 (256-293)||(8379152-8379189)
chr7 (240-293)||(25099624-25099677)
chr7 (240-293)||(27234946-27234999)
chr7 (256-293)||(30005964-30006001)
chr7 (256-293)||(35160764-35160801)
chr7 (240-289)||(35160841-35160890)
chr7 (240-293)||(37066270-37066323)
chr7 (256-293)||(43067039-43067076)
chr7 (240-293)||(46578353-46578406)
chr7 (237-293)||(3498290-3498346)
chr7 (253-293)||(11676916-11676956)
chr7 (253-293)||(11676973-11677013)
chr7 (237-293)||(23092350-23092406)
chr7 (253-293)||(27234870-27234910)
chr7 (256-292)||(34118438-34118474)
chr7 (235-287)||(39098289-39098341)
[»] chr4 (37 HSPs)
chr4 (240-293)||(34595770-34595823)
chr4 (244-293)||(55131624-55131673)
chr4 (235-293)||(17028321-17028379)
chr4 (240-293)||(16200166-16200219)
chr4 (244-293)||(34936315-34936364)
chr4 (240-293)||(50519350-50519403)
chr4 (240-293)||(53019224-53019277)
chr4 (253-293)||(16391951-16391991)
chr4 (253-293)||(55131548-55131588)
chr4 (253-292)||(37175521-37175560)
chr4 (251-293)||(15185913-15185955)
chr4 (237-291)||(23710831-23710885)
chr4 (235-293)||(34166106-34166164)
chr4 (256-293)||(1945451-1945488)
chr4 (240-293)||(4711405-4711458)
chr4 (252-293)||(11511756-11511797)
chr4 (256-293)||(15133842-15133879)
chr4 (240-293)||(18592344-18592397)
chr4 (256-293)||(23511877-23511914)
chr4 (256-293)||(23511964-23512001)
chr4 (240-293)||(24156138-24156191)
chr4 (244-293)||(26185956-26186005)
chr4 (256-293)||(27080130-27080167)
chr4 (256-293)||(30051358-30051395)
chr4 (256-293)||(33379486-33379523)
chr4 (256-293)||(34321470-34321507)
chr4 (244-293)||(34459073-34459122)
chr4 (232-289)||(44495681-44495738)
chr4 (240-293)||(48088083-48088136)
chr4 (240-293)||(51126104-51126157)
chr4 (256-293)||(51545400-51545437)
chr4 (256-293)||(52913648-52913685)
chr4 (256-293)||(54569444-54569481)
chr4 (240-293)||(56420430-56420483)
chr4 (253-293)||(16391444-16391484)
chr4 (256-292)||(43201097-43201133)
chr4 (237-293)||(47628277-47628333)
[»] chr6 (13 HSPs)
chr6 (244-292)||(13397505-13397553)
chr6 (237-287)||(7109012-7109062)
chr6 (242-293)||(3586092-3586144)
chr6 (243-293)||(3418844-3418894)
chr6 (243-293)||(7246959-7247009)
chr6 (251-293)||(26498603-26498645)
chr6 (243-293)||(31872850-31872900)
chr6 (240-293)||(5433419-5433472)
chr6 (240-293)||(13853460-13853513)
chr6 (256-293)||(15090981-15091018)
chr6 (256-293)||(21478568-21478605)
chr6 (256-293)||(26597180-26597217)
chr6 (241-293)||(5433332-5433383)
[»] chr2 (11 HSPs)
chr2 (229-293)||(19908493-19908557)
chr2 (240-293)||(40846552-40846605)
chr2 (240-293)||(20556674-20556727)
chr2 (240-293)||(21208980-21209033)
chr2 (256-293)||(22352531-22352568)
chr2 (256-293)||(27327845-27327882)
chr2 (256-293)||(34466113-34466150)
chr2 (256-293)||(41145279-41145316)
chr2 (237-293)||(2795398-2795454)
chr2 (240-292)||(31596886-31596938)
chr2 (253-293)||(38532459-38532499)
[»] chr5 (24 HSPs)
chr5 (243-293)||(36137017-36137067)
chr5 (256-293)||(43340430-43340467)
chr5 (240-293)||(43585494-43585547)
chr5 (237-293)||(15966731-15966787)
chr5 (263-293)||(15966665-15966695)
chr5 (240-293)||(6638229-6638282)
chr5 (256-293)||(9247050-9247087)
chr5 (240-293)||(14550120-14550173)
chr5 (256-293)||(18942001-18942038)
chr5 (244-293)||(25257072-25257121)
chr5 (244-293)||(25320862-25320911)
chr5 (256-293)||(25600592-25600629)
chr5 (244-293)||(27990445-27990494)
chr5 (240-293)||(29112283-29112336)
chr5 (240-293)||(34186443-34186496)
chr5 (240-293)||(35245696-35245749)
chr5 (240-293)||(36917166-36917219)
chr5 (240-293)||(37039780-37039833)
chr5 (256-293)||(43585583-43585620)
chr5 (237-293)||(8959873-8959929)
chr5 (237-293)||(16137916-16137971)
chr5 (253-293)||(23118161-23118201)
chr5 (257-293)||(24230939-24230975)
chr5 (235-287)||(25600646-25600698)
[»] scaffold0047 (1 HSPs)
scaffold0047 (240-293)||(63526-63579)
[»] scaffold0013 (2 HSPs)
scaffold0013 (240-289)||(58299-58348)
scaffold0013 (243-293)||(58388-58438)
[»] chr8 (14 HSPs)
chr8 (256-293)||(8568908-8568945)
chr8 (240-293)||(26492397-26492450)
chr8 (240-293)||(44282264-44282317)
chr8 (237-293)||(18126051-18126107)
chr8 (237-293)||(32241744-32241800)
chr8 (235-293)||(9331283-9331341)
chr8 (240-293)||(7256886-7256939)
chr8 (256-293)||(8568835-8568872)
chr8 (256-293)||(11302031-11302068)
chr8 (256-293)||(11302978-11303015)
chr8 (256-293)||(26492324-26492361)
chr8 (240-293)||(34188406-34188459)
chr8 (240-293)||(43484020-43484073)
chr8 (240-293)||(44282353-44282406)
[»] chr3 (25 HSPs)
chr3 (240-293)||(42595727-42595780)
chr3 (256-293)||(54008453-54008490)
chr3 (234-293)||(33639002-33639061)
chr3 (240-287)||(43883957-43884004)
chr3 (234-293)||(47931777-47931836)
chr3 (235-293)||(54008295-54008353)
chr3 (240-293)||(378776-378829)
chr3 (240-293)||(1453385-1453438)
chr3 (256-293)||(13083886-13083923)
chr3 (256-293)||(13927483-13927520)
chr3 (240-293)||(16894258-16894311)
chr3 (240-293)||(17004957-17005010)
chr3 (256-293)||(17005048-17005085)
chr3 (256-293)||(17056595-17056632)
chr3 (240-293)||(17940187-17940240)
chr3 (256-293)||(38082602-38082639)
chr3 (256-293)||(40326526-40326563)
chr3 (256-293)||(44544173-44544210)
chr3 (256-293)||(47342597-47342634)
chr3 (256-293)||(51256582-51256619)
chr3 (256-293)||(51486441-51486478)
chr3 (256-293)||(54985538-54985575)
chr3 (256-292)||(4979696-4979732)
chr3 (237-293)||(25990737-25990793)
chr3 (237-285)||(46843632-46843680)
[»] scaffold0063 (1 HSPs)
scaffold0063 (244-293)||(54637-54686)
[»] scaffold0036 (1 HSPs)
scaffold0036 (240-293)||(36498-36551)
[»] scaffold1786 (1 HSPs)
scaffold1786 (253-293)||(598-638)
[»] scaffold0129 (1 HSPs)
scaffold0129 (256-292)||(43890-43926)


Alignment Details
Target: chr1 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 240 - 293
Target Start/End: Original strand, 39015562 - 39015615
Alignment:
Q  240 tccctccgttgtcaattataaacaaaattaactttttaggttcattcaattaat 293  Q
    ||||||||||| |||||||||||||| || ||||||||||||||||||||||||    
T  39015562 tccctccgttgccaattataaacaaatttgactttttaggttcattcaattaat 39015615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 240 - 292
Target Start/End: Complemental strand, 15013798 - 15013746
Alignment:
Q  240 tccctccgttgtcaattataaacaaaattaactttttaggttcattcaattaa 292  Q
    |||||||||||| ||||||||||||| |||||||||||||| |||||||||||    
T  15013798 tccctccgttgttaattataaacaaatttaactttttaggtacattcaattaa 15013746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 253 - 293
Target Start/End: Original strand, 1252143 - 1252183
Alignment:
Q  253 aattataaacaaaattaactttttaggttcattcaattaat 293  Q
    |||||||| ||||||||||||||||||||||||||||||||    
T  1252143 aattataagcaaaattaactttttaggttcattcaattaat 1252183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 240 - 293
Target Start/End: Original strand, 7230008 - 7230061
Alignment:
Q  240 tccctccgttgtcaattataaacaaaattaactttttaggttcattcaattaat 293  Q
    |||||||||| | || ||||| ||||||||||||||||| ||||||||||||||    
T  7230008 tccctccgtttttaaatataagcaaaattaactttttagattcattcaattaat 7230061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 240 - 293
Target Start/End: Complemental strand, 24023506 - 24023453
Alignment:
Q  240 tccctccgttgtcaattataaacaaaattaactttttaggttcattcaattaat 293  Q
    |||||||||| | || ||||| |||||||||||||||||||||||| |||||||    
T  24023506 tccctccgtttttaaatataagcaaaattaactttttaggttcatttaattaat 24023453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 240 - 293
Target Start/End: Original strand, 34061942 - 34061995
Alignment:
Q  240 tccctccgttgtcaattataaacaaaattaactttttaggttcattcaattaat 293  Q
    |||||||||| | || |||||||||| || ||||||||||||||||||||||||    
T  34061942 tccctccgtttttaaatataaacaaattttactttttaggttcattcaattaat 34061995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 292
Target Start/End: Original strand, 34037919 - 34037971
Alignment:
Q  240 tccctccgttgtcaattataaacaaaattaactttttaggttcattcaattaa 292  Q
    |||||||||| | || ||||||||||||| ||||||| |||||||||||||||    
T  34037919 tccctccgtttttaaatataaacaaaattgacttttttggttcattcaattaa 34037971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 242 - 293
Target Start/End: Complemental strand, 50998443 - 50998392
Alignment:
Q  242 cctccgttgtcaattataaacaaaattaactttttaggttcattcaattaat 293  Q
    |||| |||| ||||||||| |||| ||| |||||||||||||||||||||||    
T  50998443 cctctgttgccaattataagcaaatttatctttttaggttcattcaattaat 50998392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 293
Target Start/End: Complemental strand, 15285380 - 15285330
Alignment:
Q  243 ctccgttgtcaattataaacaaaattaactttttaggttcattcaattaat 293  Q
    ||||||| | || ||||||||||||| |||||||||||||||||| |||||    
T  15285380 ctccgtttttaaatataaacaaaattgactttttaggttcattcatttaat 15285330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 247 - 293
Target Start/End: Complemental strand, 47293407 - 47293361
Alignment:
Q  247 gttgtcaattataaacaaaattaactttttaggttcattcaattaat 293  Q
    |||||||||||||| |||| |||||||||||| ||||||| ||||||    
T  47293407 gttgtcaattataagcaaatttaactttttagattcattcgattaat 47293361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 293
Target Start/End: Original strand, 4838326 - 4838363
Alignment:
Q  256 tataaacaaaattaactttttaggttcattcaattaat 293  Q
    |||||||||| || ||||||||||||||||||||||||    
T  4838326 tataaacaaattttactttttaggttcattcaattaat 4838363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 293
Target Start/End: Complemental strand, 15311597 - 15311560
Alignment:
Q  256 tataaacaaaattaactttttaggttcattcaattaat 293  Q
    ||||||||||||| |||||||||||||||||| |||||    
T  15311597 tataaacaaaatttactttttaggttcattcatttaat 15311560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 293
Target Start/End: Complemental strand, 17988329 - 17988292
Alignment:
Q  256 tataaacaaaattaactttttaggttcattcaattaat 293  Q
    |||||||||| || ||||||||||||||||||||||||    
T  17988329 tataaacaaattttactttttaggttcattcaattaat 17988292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 293
Target Start/End: Original strand, 21852452 - 21852489
Alignment:
Q  256 tataaacaaaattaactttttaggttcattcaattaat 293  Q
    ||||| ||||||| ||||||||||||||||||||||||    
T  21852452 tataagcaaaattgactttttaggttcattcaattaat 21852489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 293
Target Start/End: Complemental strand, 27146165 - 27146112
Alignment:
Q  240 tccctccgttgtcaattataaacaaaattaactttttaggttcattcaattaat 293  Q
    |||||||||| | || ||||| ||||||| |||||||||||||||||| |||||    
T  27146165 tccctccgtttttaaatataagcaaaattgactttttaggttcattcatttaat 27146112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 293
Target Start/End: Original strand, 34332963 - 34333000
Alignment:
Q  256 tataaacaaaattaactttttaggttcattcaattaat 293  Q
    ||||||||||||| |||||||| |||||||||||||||    
T  34332963 tataaacaaaattgactttttaagttcattcaattaat 34333000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 293
Target Start/End: Original strand, 34755020 - 34755057
Alignment:
Q  256 tataaacaaaattaactttttaggttcattcaattaat 293  Q
    ||||||||||||| |||||||||||||||||| |||||    
T  34755020 tataaacaaaattcactttttaggttcattcatttaat 34755057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 293
Target Start/End: Complemental strand, 40329013 - 40328960
Alignment:
Q  240 tccctccgttgtcaattataaacaaaattaactttttaggttcattcaattaat 293  Q
    |||||||||| | || |||||||||| || ||||||||| ||||||||||||||    
T  40329013 tccctccgtttttaaatataaacaaattttactttttagattcattcaattaat 40328960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 293
Target Start/End: Original strand, 43147462 - 43147499
Alignment:
Q  256 tataaacaaaattaactttttaggttcattcaattaat 293  Q
    ||||||||||||| |||||||||||||||||| |||||    
T  43147462 tataaacaaaatttactttttaggttcattcatttaat 43147499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 293
Target Start/End: Original strand, 47011259 - 47011296
Alignment:
Q  256 tataaacaaaattaactttttaggttcattcaattaat 293  Q
    |||||||||| || ||||||||||||||||||||||||    
T  47011259 tataaacaaattttactttttaggttcattcaattaat 47011296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 293
Target Start/End: Original strand, 47991776 - 47991829
Alignment:
Q  240 tccctccgttgtcaattataaacaaaattaactttttaggttcattcaattaat 293  Q
    |||||||||| | |||||||| |||| || |||||||||||||||||| |||||    
T  47991776 tccctccgttatgaattataagcaaatttgactttttaggttcattcatttaat 47991829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 293
Target Start/End: Original strand, 50998307 - 50998356
Alignment:
Q  244 tccgttgtcaattataaacaaaattaactttttaggttcattcaattaat 293  Q
    ||||||| ||||||||| |||| || | ||||||||||||||||||||||    
T  50998307 tccgttgccaattataagcaaatttgattttttaggttcattcaattaat 50998356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 253 - 293
Target Start/End: Original strand, 3606273 - 3606313
Alignment:
Q  253 aattataaacaaaattaactttttaggttcattcaattaat 293  Q
    |||||||| ||||||| ||||||||| ||||||||||||||    
T  3606273 aattataagcaaaattgactttttagattcattcaattaat 3606313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 253 - 293
Target Start/End: Original strand, 9675891 - 9675931
Alignment:
Q  253 aattataaacaaaattaactttttaggttcattcaattaat 293  Q
    ||||||||||||| || |||||||| |||||||||||||||    
T  9675891 aattataaacaaatttgactttttaagttcattcaattaat 9675931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 237 - 293
Target Start/End: Original strand, 12062190 - 12062246
Alignment:
Q  237 tattccctccgttgtcaattataaacaaaattaactttttaggttcattcaattaat 293  Q
    |||| |||||||| | || |||||  |||||| ||||||||||||||||||||||||    
T  12062190 tatttcctccgtttttaaatataaggaaaattgactttttaggttcattcaattaat 12062246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 237 - 293
Target Start/End: Original strand, 12993520 - 12993576
Alignment:
Q  237 tattccctccgttgtcaattataaacaaaattaactttttaggttcattcaattaat 293  Q
    ||||||||||||| | || |||||| ||| || | ||||||||||||||||||||||    
T  12993520 tattccctccgttctaaaatataaataaatttgattttttaggttcattcaattaat 12993576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 253 - 293
Target Start/End: Original strand, 39422075 - 39422115
Alignment:
Q  253 aattataaacaaaattaactttttaggttcattcaattaat 293  Q
    |||||||| ||||||| ||||||||||||| ||||||||||    
T  39422075 aattataagcaaaatttactttttaggttcgttcaattaat 39422115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 254 - 286
Target Start/End: Original strand, 52132805 - 52132837
Alignment:
Q  254 attataaacaaaattaactttttaggttcattc 286  Q
    ||||||||||||||||||||||||| |||||||    
T  52132805 attataaacaaaattaactttttagattcattc 52132837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 21)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 230 - 293
Target Start/End: Complemental strand, 11677090 - 11677027
Alignment:
Q  230 acactactattccctccgttgtcaattataaacaaaattaactttttaggttcattcaattaat 293  Q
    |||||| || |||||||||| | |||||||| ||||||||| ||||||||||||||||||||||    
T  11677090 acactaatactccctccgtttttaattataagcaaaattaattttttaggttcattcaattaat 11677027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 237 - 293
Target Start/End: Complemental strand, 11032447 - 11032391
Alignment:
Q  237 tattccctccgttgtcaattataaacaaaattaactttttaggttcattcaattaat 293  Q
    ||||||||||||| |||||||||| || | || ||||||||||||||||||||||||    
T  11032447 tattccctccgttttcaattataagcagattttactttttaggttcattcaattaat 11032391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 237 - 291
Target Start/End: Complemental strand, 45967741 - 45967687
Alignment:
Q  237 tattccctccgttgtcaattataaacaaaattaactttttaggttcattcaatta 291  Q
    ||||| ||||||||||||||||||||||| |||||||||||  |||||| |||||    
T  45967741 tattctctccgttgtcaattataaacaaatttaactttttaaattcatttaatta 45967687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 292
Target Start/End: Complemental strand, 32427769 - 32427729
Alignment:
Q  252 caattataaacaaaattaactttttaggttcattcaattaa 292  Q
    ||||||||| |||||||||||||||||||||||||| ||||    
T  32427769 caattataagcaaaattaactttttaggttcattcatttaa 32427729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 241 - 293
Target Start/End: Original strand, 45833190 - 45833242
Alignment:
Q  241 ccctccgttgtcaattataaacaaaattaactttttaggttcattcaattaat 293  Q
    ||||||||| | || |||||||||| || ||||||||||||||||||||||||    
T  45833190 ccctccgtttttaaatataaacaaattttactttttaggttcattcaattaat 45833242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 293
Target Start/End: Original strand, 8379152 - 8379189
Alignment:
Q  256 tataaacaaaattaactttttaggttcattcaattaat 293  Q
    ||||| |||| |||||||||||||||||||||||||||    
T  8379152 tataagcaaatttaactttttaggttcattcaattaat 8379189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 293
Target Start/End: Complemental strand, 25099677 - 25099624
Alignment:
Q  240 tccctccgttgtcaattataaacaaaattaactttttaggttcattcaattaat 293  Q
    |||||||||| | || ||||| |||||||||||||||||| ||||||| |||||    
T  25099677 tccctccgtttttaaatataagcaaaattaactttttagggtcattcatttaat 25099624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 293
Target Start/End: Complemental strand, 27234999 - 27234946
Alignment:
Q  240 tccctccgttgtcaattataaacaaaattaactttttaggttcattcaattaat 293  Q
    |||||||||||  ||||||||  ||| || ||||||||||||||||||||||||    
T  27234999 tccctccgttgctaattataagtaaatttgactttttaggttcattcaattaat 27234946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 293
Target Start/End: Complemental strand, 30006001 - 30005964
Alignment:
Q  256 tataaacaaaattaactttttaggttcattcaattaat 293  Q
    ||||| ||||||| ||||||||||||||||||||||||    
T  30006001 tataagcaaaattgactttttaggttcattcaattaat 30005964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 293
Target Start/End: Original strand, 35160764 - 35160801
Alignment:
Q  256 tataaacaaaattaactttttaggttcattcaattaat 293  Q
    ||||| ||||||| ||||||||||||||||||||||||    
T  35160764 tataagcaaaattgactttttaggttcattcaattaat 35160801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 289
Target Start/End: Complemental strand, 35160890 - 35160841
Alignment:
Q  240 tccctccgttgtcaattataaacaaaattaactttttaggttcattcaat 289  Q
    |||||||||| | || ||||| ||||||| ||||||||||||||||||||    
T  35160890 tccctccgtttttaaatataagcaaaattgactttttaggttcattcaat 35160841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 293
Target Start/End: Complemental strand, 37066323 - 37066270
Alignment:
Q  240 tccctccgttgtcaattataaacaaaattaactttttaggttcattcaattaat 293  Q
    |||||||||| | || ||||| |||| || ||||||||||||||||||||||||    
T  37066323 tccctccgttttaaaatataagcaaattttactttttaggttcattcaattaat 37066270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 293
Target Start/End: Original strand, 43067039 - 43067076
Alignment:
Q  256 tataaacaaaattaactttttaggttcattcaattaat 293  Q
    ||||| ||||||| ||||||||||||||||||||||||    
T  43067039 tataagcaaaatttactttttaggttcattcaattaat 43067076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 293
Target Start/End: Complemental strand, 46578406 - 46578353
Alignment:
Q  240 tccctccgttgtcaattataaacaaaattaactttttaggttcattcaattaat 293  Q
    |||||||||| | || ||||| |||| || ||||||||||||||||||||||||    
T  46578406 tccctccgttttaaaatataagcaaattttactttttaggttcattcaattaat 46578353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 237 - 293
Target Start/End: Original strand, 3498290 - 3498346
Alignment:
Q  237 tattccctccgttgtcaattataaacaaaattaactttttaggttcattcaattaat 293  Q
    ||||||||||||| | || ||||| |||| || ||||||||| ||||||||||||||    
T  3498290 tattccctccgttttaaaatataagcaaattttactttttagattcattcaattaat 3498346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 253 - 293
Target Start/End: Original strand, 11676916 - 11676956
Alignment:
Q  253 aattataaacaaaattaactttttaggttcattcaattaat 293  Q
    |||||||| ||||||| | ||||||||||||||||||||||    
T  11676916 aattataagcaaaattgattttttaggttcattcaattaat 11676956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 253 - 293
Target Start/End: Complemental strand, 11677013 - 11676973
Alignment:
Q  253 aattataaacaaaattaactttttaggttcattcaattaat 293  Q
    |||||||| ||||||| | ||||||||||||||||||||||    
T  11677013 aattataagcaaaattgattttttaggttcattcaattaat 11676973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 237 - 293
Target Start/End: Original strand, 23092350 - 23092406
Alignment:
Q  237 tattccctccgttgtcaattataaacaaaattaactttttaggttcattcaattaat 293  Q
    ||||||||| ||| | |||||||| |||| ||||||||||| ||||||| |||||||    
T  23092350 tattccctcagttattaattataagcaaatttaactttttaagttcatttaattaat 23092406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 253 - 293
Target Start/End: Original strand, 27234870 - 27234910
Alignment:
Q  253 aattataaacaaaattaactttttaggttcattcaattaat 293  Q
    |||||||| |||| || ||||||||||||||||||||||||    
T  27234870 aattataagcaaattttactttttaggttcattcaattaat 27234910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 256 - 292
Target Start/End: Complemental strand, 34118474 - 34118438
Alignment:
Q  256 tataaacaaaattaactttttaggttcattcaattaa 292  Q
    ||||||||||||||||||||||||| |||||| ||||    
T  34118474 tataaacaaaattaactttttaggtccattcatttaa 34118438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 235 - 287
Target Start/End: Original strand, 39098289 - 39098341
Alignment:
Q  235 actattccctccgttgtcaattataaacaaaattaactttttaggttcattca 287  Q
    |||| ||||||||||   || ||||||||||||| ||||||||||||||||||    
T  39098289 actactccctccgtttctaaatataaacaaaattgactttttaggttcattca 39098341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 38; Significance: 0.000000000002; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 240 - 293
Target Start/End: Complemental strand, 34595823 - 34595770
Alignment:
Q  240 tccctccgttgtcaattataaacaaaattaactttttaggttcattcaattaat 293  Q
    |||||||||| | || ||||||||||||| ||||||||||||||||||||||||    
T  34595823 tccctccgtttttaaatataaacaaaattgactttttaggttcattcaattaat 34595770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 244 - 293
Target Start/End: Complemental strand, 55131673 - 55131624
Alignment:
Q  244 tccgttgtcaattataaacaaaattaactttttaggttcattcaattaat 293  Q
    |||||||| |||||||| |||| |||||||||||||||||||||||||||    
T  55131673 tccgttgttaattataagcaaatttaactttttaggttcattcaattaat 55131624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 235 - 293
Target Start/End: Complemental strand, 17028379 - 17028321
Alignment:
Q  235 actattccctccgttgtcaattataaacaaaattaactttttaggttcattcaattaat 293  Q
    |||||||||||||||   || |||||||||| || ||||||||||||||||||||||||    
T  17028379 actattccctccgtttcaaaatataaacaaattttactttttaggttcattcaattaat 17028321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 240 - 293
Target Start/End: Original strand, 16200166 - 16200219
Alignment:
Q  240 tccctccgttgtcaattataaacaaaattaactttttaggttcattcaattaat 293  Q
    ||||||||||  ||||||||| |||| ||||||||||||||||||||| |||||    
T  16200166 tccctccgttaccaattataagcaaatttaactttttaggttcattcagttaat 16200219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 244 - 293
Target Start/End: Complemental strand, 34936364 - 34936315
Alignment:
Q  244 tccgttgtcaattataaacaaaattaactttttaggttcattcaattaat 293  Q
    |||||||||||||||||| ||| |||||||||||| |||||||| |||||    
T  34936364 tccgttgtcaattataaataaatttaactttttagattcattcagttaat 34936315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 240 - 293
Target Start/End: Complemental strand, 50519403 - 50519350
Alignment:
Q  240 tccctccgttgtcaattataaacaaaattaactttttaggttcattcaattaat 293  Q
    ||||||| ||| ||||||||| |||| || ||||||||||||||||||||||||    
T  50519403 tccctccattgccaattataagcaaatttgactttttaggttcattcaattaat 50519350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 240 - 293
Target Start/End: Complemental strand, 53019277 - 53019224
Alignment:
Q  240 tccctccgttgtcaattataaacaaaattaactttttaggttcattcaattaat 293  Q
    |||||||||||  |||||||| |||| ||||||||||| |||||||||||||||    
T  53019277 tccctccgttgctaattataagcaaatttaactttttaagttcattcaattaat 53019224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 253 - 293
Target Start/End: Original strand, 16391951 - 16391991
Alignment:
Q  253 aattataaacaaaattaactttttaggttcattcaattaat 293  Q
    ||||||||||||| |||| ||||||||||||||||||||||    
T  16391951 aattataaacaaatttaattttttaggttcattcaattaat 16391991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 253 - 293
Target Start/End: Original strand, 55131548 - 55131588
Alignment:
Q  253 aattataaacaaaattaactttttaggttcattcaattaat 293  Q
    ||||||||||||| || ||||||||||||||||||||||||    
T  55131548 aattataaacaaatttgactttttaggttcattcaattaat 55131588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 253 - 292
Target Start/End: Complemental strand, 37175560 - 37175521
Alignment:
Q  253 aattataaacaaaattaactttttaggttcattcaattaa 292  Q
    ||||||||||||| |||| |||||||||||||||||||||    
T  37175560 aattataaacaaatttaaatttttaggttcattcaattaa 37175521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 293
Target Start/End: Complemental strand, 15185955 - 15185913
Alignment:
Q  251 tcaattataaacaaaattaactttttaggttcattcaattaat 293  Q
    |||||||||| |||| || ||||||||||||||||||||||||    
T  15185955 tcaattataagcaaattttactttttaggttcattcaattaat 15185913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 237 - 291
Target Start/End: Original strand, 23710831 - 23710885
Alignment:
Q  237 tattccctccgttgtcaattataaacaaaattaactttttaggttcattcaatta 291  Q
    ||||||||||||| | || ||||| |||| || ||||||||||||||||||||||    
T  23710831 tattccctccgttttaaaatataagcaaattttactttttaggttcattcaatta 23710885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 293
Target Start/End: Original strand, 34166106 - 34166164
Alignment:
Q  235 actattccctccgttgtcaattataaacaaaattaactttttaggttcattcaattaat 293  Q
    |||| ||||||||||   || ||||| ||||||| ||||||||||||||||||||||||    
T  34166106 actactccctccgtttctaaatataagcaaaattgactttttaggttcattcaattaat 34166164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 293
Target Start/End: Complemental strand, 1945488 - 1945451
Alignment:
Q  256 tataaacaaaattaactttttaggttcattcaattaat 293  Q
    ||||| ||||||| ||||||||||||||||||||||||    
T  1945488 tataaccaaaattgactttttaggttcattcaattaat 1945451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 293
Target Start/End: Original strand, 4711405 - 4711458
Alignment:
Q  240 tccctccgttgtcaattataaacaaaattaactttttaggttcattcaattaat 293  Q
    ||||||||||   |||||||||||||||| | |||||| |||||||||||||||    
T  4711405 tccctccgtttctaattataaacaaaattgattttttatgttcattcaattaat 4711458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 293
Target Start/End: Complemental strand, 11511797 - 11511756
Alignment:
Q  252 caattataaacaaaattaactttttaggttcattcaattaat 293  Q
    ||||||||| |||| ||||||||||||||||||| |||||||    
T  11511797 caattataagcaaatttaactttttaggttcatttaattaat 11511756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 293
Target Start/End: Original strand, 15133842 - 15133879
Alignment:
Q  256 tataaacaaaattaactttttaggttcattcaattaat 293  Q
    ||||| ||||||| ||||||||||||||||||||||||    
T  15133842 tataagcaaaatttactttttaggttcattcaattaat 15133879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 293
Target Start/End: Original strand, 18592344 - 18592397
Alignment:
Q  240 tccctccgttgtcaattataaacaaaattaactttttaggttcattcaattaat 293  Q
    |||||||||| | || ||||| ||||||| |||||||||||||||||| |||||    
T  18592344 tccctccgtttttaaatataagcaaaattgactttttaggttcattcatttaat 18592397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 293
Target Start/End: Original strand, 23511877 - 23511914
Alignment:
Q  256 tataaacaaaattaactttttaggttcattcaattaat 293  Q
    ||||| ||||||| ||||||||||||||||||||||||    
T  23511877 tataagcaaaattgactttttaggttcattcaattaat 23511914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 293
Target Start/End: Complemental strand, 23512001 - 23511964
Alignment:
Q  256 tataaacaaaattaactttttaggttcattcaattaat 293  Q
    ||||| ||||||| ||||||||||||||||||||||||    
T  23512001 tataagcaaaattgactttttaggttcattcaattaat 23511964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 293
Target Start/End: Original strand, 24156138 - 24156191
Alignment:
Q  240 tccctccgttgtcaattataaacaaaattaactttttaggttcattcaattaat 293  Q
    |||||||||| | || ||||| ||||||| |||||||||||||||||| |||||    
T  24156138 tccctccgtttttaaatataagcaaaattgactttttaggttcattcatttaat 24156191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 293
Target Start/End: Complemental strand, 26186005 - 26185956
Alignment:
Q  244 tccgttgtcaattataaacaaaattaactttttaggttcattcaattaat 293  Q
    |||||| | ||||||||||||| || |||||||||||||||||| |||||    
T  26186005 tccgtttttaattataaacaaattttactttttaggttcattcatttaat 26185956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 293
Target Start/End: Complemental strand, 27080167 - 27080130
Alignment:
Q  256 tataaacaaaattaactttttaggttcattcaattaat 293  Q
    ||||| ||||||| ||||||||||||||||||||||||    
T  27080167 tataagcaaaatttactttttaggttcattcaattaat 27080130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 293
Target Start/End: Original strand, 30051358 - 30051395
Alignment:
Q  256 tataaacaaaattaactttttaggttcattcaattaat 293  Q
    ||||| |||| |||||||||||||||||||||||||||    
T  30051358 tataagcaaatttaactttttaggttcattcaattaat 30051395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 293
Target Start/End: Complemental strand, 33379523 - 33379486
Alignment:
Q  256 tataaacaaaattaactttttaggttcattcaattaat 293  Q
    |||||||||| || ||||||||||||||||||||||||    
T  33379523 tataaacaaatttcactttttaggttcattcaattaat 33379486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 293
Target Start/End: Complemental strand, 34321507 - 34321470
Alignment:
Q  256 tataaacaaaattaactttttaggttcattcaattaat 293  Q
    ||||||||||||| |||||||||||||||||| |||||    
T  34321507 tataaacaaaattgactttttaggttcattcatttaat 34321470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 293
Target Start/End: Complemental strand, 34459122 - 34459073
Alignment:
Q  244 tccgttgtcaattataaacaaaattaactttttaggttcattcaattaat 293  Q
    |||||| |||||||||| |||| || | ||||||||||||||||||||||    
T  34459122 tccgttttcaattataagcaaatttgaatttttaggttcattcaattaat 34459073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 289
Target Start/End: Original strand, 44495681 - 44495738
Alignment:
Q  232 actactattccctccgttgtcaattataaacaaaattaactttttaggttcattcaat 289  Q
    ||||||| |||||||||| | || ||||| |||| || ||||||||||||||||||||    
T  44495681 actactactccctccgtttttaaatataagcaaatttgactttttaggttcattcaat 44495738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 293
Target Start/End: Complemental strand, 48088136 - 48088083
Alignment:
Q  240 tccctccgttgtcaattataaacaaaattaactttttaggttcattcaattaat 293  Q
    |||||||||| | || ||||| ||||||| |||||||| |||||||||||||||    
T  48088136 tccctccgtttttaaatataagcaaaattgactttttatgttcattcaattaat 48088083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 293
Target Start/End: Original strand, 51126104 - 51126157
Alignment:
Q  240 tccctccgttgtcaattataaacaaaattaactttttaggttcattcaattaat 293  Q
    |||||||||| | || ||||| |||| || ||||||||||||||||||||||||    
T  51126104 tccctccgttttaaaatataagcaaattttactttttaggttcattcaattaat 51126157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 293
Target Start/End: Original strand, 51545400 - 51545437
Alignment:
Q  256 tataaacaaaattaactttttaggttcattcaattaat 293  Q
    ||||||||||||| |||||||||||||||||| |||||    
T  51545400 tataaacaaaattcactttttaggttcattcatttaat 51545437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 293
Target Start/End: Original strand, 52913648 - 52913685
Alignment:
Q  256 tataaacaaaattaactttttaggttcattcaattaat 293  Q
    ||||||||||||| |||||||||||||||||| |||||    
T  52913648 tataaacaaaatttactttttaggttcattcatttaat 52913685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 293
Target Start/End: Complemental strand, 54569481 - 54569444
Alignment:
Q  256 tataaacaaaattaactttttaggttcattcaattaat 293  Q
    ||||| ||||||||| ||||||||||||||||||||||    
T  54569481 tataagcaaaattaattttttaggttcattcaattaat 54569444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 293
Target Start/End: Original strand, 56420430 - 56420483
Alignment:
Q  240 tccctccgttgtcaattataaacaaaattaactttttaggttcattcaattaat 293  Q
    |||||||||| | || |||||||||| || |||||||||||||| |||||||||    
T  56420430 tccctccgtttttaaatataaacaaattttactttttaggttcactcaattaat 56420483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 253 - 293
Target Start/End: Original strand, 16391444 - 16391484
Alignment:
Q  253 aattataaacaaaattaactttttaggttcattcaattaat 293  Q
    ||||||||||||| |||| ||||||| ||||||||||||||    
T  16391444 aattataaacaaatttaattttttagattcattcaattaat 16391484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 256 - 292
Target Start/End: Complemental strand, 43201133 - 43201097
Alignment:
Q  256 tataaacaaaattaactttttaggttcattcaattaa 292  Q
    ||||||||||||| |||||||||||||||||| ||||    
T  43201133 tataaacaaaatttactttttaggttcattcatttaa 43201097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 237 - 293
Target Start/End: Original strand, 47628277 - 47628333
Alignment:
Q  237 tattccctccgttgtcaattataaacaaaattaactttttaggttcattcaattaat 293  Q
    |||||||||||||   || ||||| ||||||| |||||||||||||||||| |||||    
T  47628277 tattccctccgtttcaaaatataagcaaaatttactttttaggttcattcatttaat 47628333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 37; Significance: 0.000000000007; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 244 - 292
Target Start/End: Complemental strand, 13397553 - 13397505
Alignment:
Q  244 tccgttgtcaattataaacaaaattaactttttaggttcattcaattaa 292  Q
    |||||||||||||||||||||| |||| || ||||||||||||||||||    
T  13397553 tccgttgtcaattataaacaaatttaaattcttaggttcattcaattaa 13397505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 237 - 287
Target Start/End: Original strand, 7109012 - 7109062
Alignment:
Q  237 tattccctccgttgtcaattataaacaaaattaactttttaggttcattca 287  Q
    ||||||||||||| | || ||||||||||||||||||||||| ||||||||    
T  7109012 tattccctccgtttttaaatataaacaaaattaactttttagattcattca 7109062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 293
Target Start/End: Complemental strand, 3586144 - 3586092
Alignment:
Q  242 cctccgttgtcaattataaacaaaatt-aactttttaggttcattcaattaat 293  Q
    |||||||||||||||||||| ||| || || ||||||||||||||||||||||    
T  3586144 cctccgttgtcaattataaataaattttaaatttttaggttcattcaattaat 3586092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 293
Target Start/End: Complemental strand, 3418894 - 3418844
Alignment:
Q  243 ctccgttgtcaattataaacaaaattaactttttaggttcattcaattaat 293  Q
    ||||||| | || ||||| ||||||| ||||||||||||||||||||||||    
T  3418894 ctccgtttttaaatataagcaaaattgactttttaggttcattcaattaat 3418844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 293
Target Start/End: Complemental strand, 7247009 - 7246959
Alignment:
Q  243 ctccgttgtcaattataaacaaaattaactttttaggttcattcaattaat 293  Q
    ||||||| | || |||||| |||||||| ||||||||||||||||||||||    
T  7247009 ctccgtttttaaatataaataaaattaattttttaggttcattcaattaat 7246959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 293
Target Start/End: Original strand, 26498603 - 26498645
Alignment:
Q  251 tcaattataaacaaaattaactttttaggttcattcaattaat 293  Q
    ||||||||||| ||| |||||||||||||||| ||||||||||    
T  26498603 tcaattataaataaatttaactttttaggttccttcaattaat 26498645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 293
Target Start/End: Original strand, 31872850 - 31872900
Alignment:
Q  243 ctccgttgtcaattataaacaaaattaactttttaggttcattcaattaat 293  Q
    |||| |||||||||||||  ||| |||| ||||||||||||||||||||||    
T  31872850 ctccattgtcaattataagaaaatttaaatttttaggttcattcaattaat 31872900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 293
Target Start/End: Complemental strand, 5433472 - 5433419
Alignment:
Q  240 tccctccgttgtcaattataaacaaaattaactttttaggttcattcaattaat 293  Q
    |||||||||| | |||||||| |||| || |||||||| |||||||||||||||    
T  5433472 tccctccgtttttaattataagcaaatttgactttttatgttcattcaattaat 5433419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 293
Target Start/End: Complemental strand, 13853513 - 13853460
Alignment:
Q  240 tccctccgttgtcaattataaacaaaattaactttttaggttcattcaattaat 293  Q
    |||||| ||| | ||||||||| |||||| |||||||| |||||||||||||||    
T  13853513 tccctctgttattaattataaataaaattgactttttaagttcattcaattaat 13853460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 293
Target Start/End: Complemental strand, 15091018 - 15090981
Alignment:
Q  256 tataaacaaaattaactttttaggttcattcaattaat 293  Q
    ||||||||||||| |||||||||||||||||| |||||    
T  15091018 tataaacaaaattcactttttaggttcattcatttaat 15090981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 293
Target Start/End: Original strand, 21478568 - 21478605
Alignment:
Q  256 tataaacaaaattaactttttaggttcattcaattaat 293  Q
    ||||||||||||| ||||||||| ||||||||||||||    
T  21478568 tataaacaaaattgactttttagattcattcaattaat 21478605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 293
Target Start/End: Original strand, 26597180 - 26597217
Alignment:
Q  256 tataaacaaaattaactttttaggttcattcaattaat 293  Q
    ||||||||||||| |||||||||||||||||| |||||    
T  26597180 tataaacaaaattcactttttaggttcattcatttaat 26597217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 241 - 293
Target Start/End: Original strand, 5433332 - 5433383
Alignment:
Q  241 ccctccgttgtcaattataaacaaaattaactttttaggttcattcaattaat 293  Q
    ||||||||| |||||||||| |||| || ||| ||||||||||||||||||||    
T  5433332 ccctccgttttcaattataagcaaa-ttgactatttaggttcattcaattaat 5433383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 37; Significance: 0.000000000007; HSPs: 11)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 229 - 293
Target Start/End: Original strand, 19908493 - 19908557
Alignment:
Q  229 tacactactattccctccgttgtcaattataaacaaaattaactttttaggttcattcaattaat 293  Q
    ||||| ||||||||||||||| | || ||||| ||||||| |||||||||||||||||| |||||    
T  19908493 tacaccactattccctccgttttaaaatataagcaaaattcactttttaggttcattcatttaat 19908557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 240 - 293
Target Start/End: Complemental strand, 40846605 - 40846552
Alignment:
Q  240 tccctccgttgtcaattataaacaaaattaactttttaggttcattcaattaat 293  Q
    |||||||||| | || ||||||||||||| |||||||||||||||||| |||||    
T  40846605 tccctccgttttaaaatataaacaaaattcactttttaggttcattcatttaat 40846552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 293
Target Start/End: Complemental strand, 20556727 - 20556674
Alignment:
Q  240 tccctccgttgtcaattataaacaaaattaactttttaggttcattcaattaat 293  Q
    |||||||||| |||| ||||| ||||||| | |||||||||||||||| |||||    
T  20556727 tccctccgttttcaaatataagcaaaattgattttttaggttcattcatttaat 20556674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 293
Target Start/End: Complemental strand, 21209033 - 21208980
Alignment:
Q  240 tccctccgttgtcaattataaacaaaattaactttttaggttcattcaattaat 293  Q
    |||||||||| | || ||||| ||||||| |||||||||||||||||| |||||    
T  21209033 tccctccgttttaaaatataagcaaaattcactttttaggttcattcatttaat 21208980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 293
Target Start/End: Complemental strand, 22352568 - 22352531
Alignment:
Q  256 tataaacaaaattaactttttaggttcattcaattaat 293  Q
    ||||||||||||| |||||||||||||||||| |||||    
T  22352568 tataaacaaaattcactttttaggttcattcatttaat 22352531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 293
Target Start/End: Original strand, 27327845 - 27327882
Alignment:
Q  256 tataaacaaaattaactttttaggttcattcaattaat 293  Q
    |||||||||| || ||||||||||||||||||||||||    
T  27327845 tataaacaaattttactttttaggttcattcaattaat 27327882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 293
Target Start/End: Original strand, 34466113 - 34466150
Alignment:
Q  256 tataaacaaaattaactttttaggttcattcaattaat 293  Q
    |||||||||| || ||||||||||||||||||||||||    
T  34466113 tataaacaaattttactttttaggttcattcaattaat 34466150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 293
Target Start/End: Original strand, 41145279 - 41145316
Alignment:
Q  256 tataaacaaaattaactttttaggttcattcaattaat 293  Q
    |||||||||| || ||||||||||||||||||||||||    
T  41145279 tataaacaaattttactttttaggttcattcaattaat 41145316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 237 - 293
Target Start/End: Complemental strand, 2795454 - 2795398
Alignment:
Q  237 tattccctccgttgtcaattataaacaaaattaactttttaggttcattcaattaat 293  Q
    ||||| ||||||| | || ||||| |||| || ||||||||||||||||||||||||    
T  2795454 tattctctccgttttaaaatataagcaaattttactttttaggttcattcaattaat 2795398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 292
Target Start/End: Complemental strand, 31596938 - 31596886
Alignment:
Q  240 tccctccgttgtcaattataaacaaaattaactttttaggttcattcaattaa 292  Q
    ||||||||||   |||||||| ||||||| |||||||||||||||||| ||||    
T  31596938 tccctccgtttataattataagcaaaatttactttttaggttcattcatttaa 31596886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 253 - 293
Target Start/End: Original strand, 38532459 - 38532499
Alignment:
Q  253 aattataaacaaaattaactttttaggttcattcaattaat 293  Q
    |||||||| ||||||||||||||||| || |||||||||||    
T  38532459 aattataagcaaaattaactttttagattgattcaattaat 38532499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 35; Significance: 0.0000000001; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 243 - 293
Target Start/End: Original strand, 36137017 - 36137067
Alignment:
Q  243 ctccgttgtcaattataaacaaaattaactttttaggttcattcaattaat 293  Q
    |||||||||  |||||||||||| |||||||||||| ||||||||||||||    
T  36137017 ctccgttgttgattataaacaaatttaactttttagattcattcaattaat 36137067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 256 - 293
Target Start/End: Original strand, 43340430 - 43340467
Alignment:
Q  256 tataaacaaaattaactttttaggttcattcaattaat 293  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  43340430 tataaacaaaatttactttttaggttcattcaattaat 43340467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 240 - 293
Target Start/End: Original strand, 43585494 - 43585547
Alignment:
Q  240 tccctccgttgtcaattataaacaaaattaactttttaggttcattcaattaat 293  Q
    |||||||||| | || |||||||||| || ||||||||||||||||||||||||    
T  43585494 tccctccgtttttaaatataaacaaattttactttttaggttcattcaattaat 43585547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 237 - 293
Target Start/End: Complemental strand, 15966787 - 15966731
Alignment:
Q  237 tattccctccgttgtcaattataaacaaaattaactttttaggttcattcaattaat 293  Q
    |||| |||||||| | || |||||| |||||| ||||||||||||||||||||||||    
T  15966787 tatttcctccgtttttaaatataaataaaattgactttttaggttcattcaattaat 15966731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 263 - 293
Target Start/End: Original strand, 15966665 - 15966695
Alignment:
Q  263 aaaattaactttttaggttcattcaattaat 293  Q
    |||||||||||||||||||||||||||||||    
T  15966665 aaaattaactttttaggttcattcaattaat 15966695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 293
Target Start/End: Original strand, 6638229 - 6638282
Alignment:
Q  240 tccctccgttgtcaattataaacaaaattaactttttaggttcattcaattaat 293  Q
    |||||||||| | || ||||| |||| || ||||||||||||||||||||||||    
T  6638229 tccctccgtttttaaatataagcaaattttactttttaggttcattcaattaat 6638282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 293
Target Start/End: Complemental strand, 9247087 - 9247050
Alignment:
Q  256 tataaacaaaattaactttttaggttcattcaattaat 293  Q
    |||||||||| || ||||||||||||||||||||||||    
T  9247087 tataaacaaattttactttttaggttcattcaattaat 9247050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 293
Target Start/End: Complemental strand, 14550173 - 14550120
Alignment:
Q  240 tccctccgttgtcaattataaacaaaattaactttttaggttcattcaattaat 293  Q
    |||||||||| | || ||||| ||||||| |||||||||||||||||| |||||    
T  14550173 tccctccgttttaaaatataagcaaaattcactttttaggttcattcatttaat 14550120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 293
Target Start/End: Original strand, 18942001 - 18942038
Alignment:
Q  256 tataaacaaaattaactttttaggttcattcaattaat 293  Q
    |||||||||| || ||||||||||||||||||||||||    
T  18942001 tataaacaaattttactttttaggttcattcaattaat 18942038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 293
Target Start/End: Original strand, 25257072 - 25257121
Alignment:
Q  244 tccgttgtcaattataaacaaaattaactttttaggttcattcaattaat 293  Q
    ||||||| |||||||||||||| ||||||||| || |||||| |||||||    
T  25257072 tccgttgccaattataaacaaatttaacttttaagattcatttaattaat 25257121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 293
Target Start/End: Original strand, 25320862 - 25320911
Alignment:
Q  244 tccgttgtcaattataaacaaaattaactttttaggttcattcaattaat 293  Q
    ||||||| |||||||||||||| ||||||||| || |||||| |||||||    
T  25320862 tccgttgccaattataaacaaatttaacttttaagattcatttaattaat 25320911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 293
Target Start/End: Original strand, 25600592 - 25600629
Alignment:
Q  256 tataaacaaaattaactttttaggttcattcaattaat 293  Q
    ||||||||||||| |||||||||||||||||| |||||    
T  25600592 tataaacaaaattcactttttaggttcattcatttaat 25600629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 293
Target Start/End: Complemental strand, 27990494 - 27990445
Alignment:
Q  244 tccgttgtcaattataaacaaaattaactttttaggttcattcaattaat 293  Q
    |||||||  |||||||| |||| || ||||||||||||||||||||||||    
T  27990494 tccgttgctaattataagcaaatttcactttttaggttcattcaattaat 27990445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 293
Target Start/End: Original strand, 29112283 - 29112336
Alignment:
Q  240 tccctccgttgtcaattataaacaaaattaactttttaggttcattcaattaat 293  Q
    |||||||||| | |||||||| |||| || | ||||||||||||||||||||||    
T  29112283 tccctccgtttttaattataagcaaattttattttttaggttcattcaattaat 29112336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 293
Target Start/End: Complemental strand, 34186496 - 34186443
Alignment:
Q  240 tccctccgttgtcaattataaacaaaattaactttttaggttcattcaattaat 293  Q
    |||||||||| | || ||||| ||||||| | ||||||||||||||||||||||    
T  34186496 tccctccgtttttaaatataagcaaaattgagtttttaggttcattcaattaat 34186443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 293
Target Start/End: Complemental strand, 35245749 - 35245696
Alignment:
Q  240 tccctccgttgtcaattataaacaaaattaactttttaggttcattcaattaat 293  Q
    |||||||||| | || ||||| |||| || ||||||||||||||||||||||||    
T  35245749 tccctccgttttaaaatataagcaaattttactttttaggttcattcaattaat 35245696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 293
Target Start/End: Original strand, 36917166 - 36917219
Alignment:
Q  240 tccctccgttgtcaattataaacaaaattaactttttaggttcattcaattaat 293  Q
    |||||||||| | || ||||| ||||||| |||||||||||||||||| |||||    
T  36917166 tccctccgttttaaagtataagcaaaattcactttttaggttcattcatttaat 36917219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 293
Target Start/End: Complemental strand, 37039833 - 37039780
Alignment:
Q  240 tccctccgttgtcaattataaacaaaattaactttttaggttcattcaattaat 293  Q
    |||||||||| | || ||||| ||||||||| |||||||||||||||| |||||    
T  37039833 tccctccgtttttaaatataagcaaaattaaatttttaggttcattcatttaat 37039780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 293
Target Start/End: Complemental strand, 43585620 - 43585583
Alignment:
Q  256 tataaacaaaattaactttttaggttcattcaattaat 293  Q
    ||||| ||||||| ||||||||||||||||||||||||    
T  43585620 tataagcaaaatttactttttaggttcattcaattaat 43585583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 237 - 293
Target Start/End: Complemental strand, 8959929 - 8959873
Alignment:
Q  237 tattccctccgttgtcaattataaacaaaattaactttttaggttcattcaattaat 293  Q
    |||| |||||||| | || |||||  ||||||||||||||||||||||||| |||||    
T  8959929 tatttcctccgtttttaaatataagtaaaattaactttttaggttcattcatttaat 8959873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 237 - 293
Target Start/End: Complemental strand, 16137971 - 16137916
Alignment:
Q  237 tattccctccgttgtcaattataaacaaaattaactttttaggttcattcaattaat 293  Q
    ||||| ||||||||| ||||||||| ||| ||||||||||| ||| |||||||||||    
T  16137971 tattctctccgttgttaattataaataaatttaacttttta-gttaattcaattaat 16137916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 253 - 293
Target Start/End: Original strand, 23118161 - 23118201
Alignment:
Q  253 aattataaacaaaattaactttttaggttcattcaattaat 293  Q
    ||||||||||||| || | ||||||||||||||||||||||    
T  23118161 aattataaacaaattttattttttaggttcattcaattaat 23118201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 257 - 293
Target Start/End: Original strand, 24230939 - 24230975
Alignment:
Q  257 ataaacaaaattaactttttaggttcattcaattaat 293  Q
    |||| ||||||| ||||||||||||||||||||||||    
T  24230939 ataagcaaaattgactttttaggttcattcaattaat 24230975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 235 - 287
Target Start/End: Complemental strand, 25600698 - 25600646
Alignment:
Q  235 actattccctccgttgtcaattataaacaaaattaactttttaggttcattca 287  Q
    |||| ||| |||||| | || ||||||||||||| ||||||||||||||||||    
T  25600698 actactccatccgttttaaaatataaacaaaattcactttttaggttcattca 25600646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 240 - 293
Target Start/End: Complemental strand, 63579 - 63526
Alignment:
Q  240 tccctccgttgtcaattataaacaaaattaactttttaggttcattcaattaat 293  Q
    |||||||||| |||||||||| |||| || |||||||||||||||| |||||||    
T  63579 tccctccgttatcaattataagcaaatttgactttttaggttcatttaattaat 63526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 240 - 289
Target Start/End: Original strand, 58299 - 58348
Alignment:
Q  240 tccctccgttgtcaattataaacaaaattaactttttaggttcattcaat 289  Q
    ||||||||||| ||||||||| |||| ||||||||||| |||||||||||    
T  58299 tccctccgttgccaattataagcaaatttaactttttaagttcattcaat 58348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 293
Target Start/End: Complemental strand, 58438 - 58388
Alignment:
Q  243 ctccgttgtcaattataaacaaaattaactttttaggttcattcaattaat 293  Q
    |||||||  ||||||||| |||| || ||||||||||||||||||||||||    
T  58438 ctccgtttccaattataagcaaatttgactttttaggttcattcaattaat 58388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 34; Significance: 0.0000000004; HSPs: 14)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 256 - 293
Target Start/End: Complemental strand, 8568945 - 8568908
Alignment:
Q  256 tataaacaaaattaactttttaggttcattcaattaat 293  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  8568945 tataaacaaaattgactttttaggttcattcaattaat 8568908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 240 - 293
Target Start/End: Complemental strand, 26492450 - 26492397
Alignment:
Q  240 tccctccgttgtcaattataaacaaaattaactttttaggttcattcaattaat 293  Q
    |||||||||| | || ||||||||||||| |||||||||||||||| |||||||    
T  26492450 tccctccgtttttaaatataaacaaaatttactttttaggttcattgaattaat 26492397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 240 - 293
Target Start/End: Original strand, 44282264 - 44282317
Alignment:
Q  240 tccctccgttgtcaattataaacaaaattaactttttaggttcattcaattaat 293  Q
    ||||||||||| ||||||||| |||| || ||| ||||||||||||||||||||    
T  44282264 tccctccgttgccaattataagcaaatttgactctttaggttcattcaattaat 44282317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 237 - 293
Target Start/End: Original strand, 18126051 - 18126107
Alignment:
Q  237 tattccctccgttgtcaattataaacaaaattaactttttaggttcattcaattaat 293  Q
    ||||||||||||| | || ||||| ||||||| |||||||||||||||||| |||||    
T  18126051 tattccctccgttttaaaatataagcaaaattcactttttaggttcattcatttaat 18126107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 237 - 293
Target Start/End: Original strand, 32241744 - 32241800
Alignment:
Q  237 tattccctccgttgtcaattataaacaaaattaactttttaggttcattcaattaat 293  Q
    |||| |||||||| | || |||||||||| || ||||||||||||||||||||||||    
T  32241744 tatttcctccgttcttaaatataaacaaattttactttttaggttcattcaattaat 32241800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 293
Target Start/End: Original strand, 9331283 - 9331341
Alignment:
Q  235 actattccctccgttgtcaattataaacaaaattaactttttaggttcattcaattaat 293  Q
    |||| |||||||||| | || ||||||||||||| | |||||||||||||||| |||||    
T  9331283 actactccctccgttttgaaatataaacaaaattgattttttaggttcattcatttaat 9331341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 293
Target Start/End: Original strand, 7256886 - 7256939
Alignment:
Q  240 tccctccgttgtcaattataaacaaaattaactttttaggttcattcaattaat 293  Q
    |||||||||| | || |||||||||| || ||||||||| ||||||||||||||    
T  7256886 tccctccgttttgaaatataaacaaattttactttttagattcattcaattaat 7256939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 293
Target Start/End: Original strand, 8568835 - 8568872
Alignment:
Q  256 tataaacaaaattaactttttaggttcattcaattaat 293  Q
    |||||||||| || ||||||||||||||||||||||||    
T  8568835 tataaacaaattttactttttaggttcattcaattaat 8568872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 293
Target Start/End: Complemental strand, 11302068 - 11302031
Alignment:
Q  256 tataaacaaaattaactttttaggttcattcaattaat 293  Q
    ||||| |||||||||||||||||||||||| |||||||    
T  11302068 tataagcaaaattaactttttaggttcatttaattaat 11302031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 293
Target Start/End: Complemental strand, 11303015 - 11302978
Alignment:
Q  256 tataaacaaaattaactttttaggttcattcaattaat 293  Q
    ||||| |||||||||||||||||||||||| |||||||    
T  11303015 tataagcaaaattaactttttaggttcatttaattaat 11302978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 293
Target Start/End: Original strand, 26492324 - 26492361
Alignment:
Q  256 tataaacaaaattaactttttaggttcattcaattaat 293  Q
    ||||||||||||| | ||||||||||||||||||||||    
T  26492324 tataaacaaaattgattttttaggttcattcaattaat 26492361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 293
Target Start/End: Complemental strand, 34188459 - 34188406
Alignment:
Q  240 tccctccgttgtcaattataaacaaaattaactttttaggttcattcaattaat 293  Q
    |||||||||| | || |||||| ||| || ||||||||||||||||||||||||    
T  34188459 tccctccgttcttaaatataaataaattttactttttaggttcattcaattaat 34188406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 293
Target Start/End: Complemental strand, 43484073 - 43484020
Alignment:
Q  240 tccctccgttgtcaattataaacaaaattaactttttaggttcattcaattaat 293  Q
    |||||||||| | || ||||| |||| || ||||||||||||||||||||||||    
T  43484073 tccctccgtttttaaatataagcaaattttactttttaggttcattcaattaat 43484020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 293
Target Start/End: Complemental strand, 44282406 - 44282353
Alignment:
Q  240 tccctccgttgtcaattataaacaaaattaactttttaggttcattcaattaat 293  Q
    |||||| |||| ||||||||| |||| |||| ||||||| ||||||||||||||    
T  44282406 tccctctgttgccaattataagcaaatttaattttttagattcattcaattaat 44282353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 34; Significance: 0.0000000004; HSPs: 25)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 240 - 293
Target Start/End: Original strand, 42595727 - 42595780
Alignment:
Q  240 tccctccgttgtcaattataaacaaaattaactttttaggttcattcaattaat 293  Q
    |||||||||| | || |||||||||| || ||||||||||||||||||||||||    
T  42595727 tccctccgttttaaaatataaacaaattttactttttaggttcattcaattaat 42595780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 256 - 293
Target Start/End: Original strand, 54008453 - 54008490
Alignment:
Q  256 tataaacaaaattaactttttaggttcattcaattaat 293  Q
    |||||||||||||||||||||||||||||||| |||||    
T  54008453 tataaacaaaattaactttttaggttcattcatttaat 54008490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 234 - 293
Target Start/End: Complemental strand, 33639061 - 33639002
Alignment:
Q  234 tactattccctccgttgtcaattataaacaaaattaactttttaggttcattcaattaat 293  Q
    ||||| |||||||||| | || ||||| ||||||| |||||||||||||||||| |||||    
T  33639061 tactactccctccgtttttaaatataagcaaaattcactttttaggttcattcatttaat 33639002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 240 - 287
Target Start/End: Complemental strand, 43884004 - 43883957
Alignment:
Q  240 tccctccgttgtcaattataaacaaaattaactttttaggttcattca 287  Q
    |||||||||| | || |||||| |||||||||||||||||||||||||    
T  43884004 tccctccgtttttaaatataaataaaattaactttttaggttcattca 43883957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 234 - 293
Target Start/End: Complemental strand, 47931836 - 47931777
Alignment:
Q  234 tactattccctccgttgtcaattataaacaaaattaactttttaggttcattcaattaat 293  Q
    ||||| ||||||| ||| ||||||||| |||| |||| |||||||||| |||||||||||    
T  47931836 tactactccctccattgccaattataagcaaatttaattttttaggtttattcaattaat 47931777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 293
Target Start/End: Complemental strand, 54008353 - 54008295
Alignment:
Q  235 actattccctccgttgtcaattataaacaaaattaactttttaggttcattcaattaat 293  Q
    |||| |||||||||| | || ||||| ||||||| |||||||||||||||||| |||||    
T  54008353 actactccctccgtttttaaatataagcaaaattgactttttaggttcattcatttaat 54008295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 293
Target Start/End: Complemental strand, 378829 - 378776
Alignment:
Q  240 tccctccgttgtcaattataaacaaaattaactttttaggttcattcaattaat 293  Q
    |||||||||| | || ||||| ||||||| |||||||||||||||||| |||||    
T  378829 tccctccgttttaaaatataagcaaaattcactttttaggttcattcatttaat 378776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 293
Target Start/End: Original strand, 1453385 - 1453438
Alignment:
Q  240 tccctccgttgtcaattataaacaaaattaactttttaggttcattcaattaat 293  Q
    |||||||||| | |||||||| ||||||| | ||||||||||||||| ||||||    
T  1453385 tccctccgttctaaattataagcaaaattgattttttaggttcattcgattaat 1453438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 293
Target Start/End: Original strand, 13083886 - 13083923
Alignment:
Q  256 tataaacaaaattaactttttaggttcattcaattaat 293  Q
    ||||||||||||| | ||||||||||||||||||||||    
T  13083886 tataaacaaaattgattttttaggttcattcaattaat 13083923  T

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Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 293
Target Start/End: Complemental strand, 13927520 - 13927483
Alignment:
Q  256 tataaacaaaattaactttttaggttcattcaattaat 293  Q
    ||||||||||||| |||||||||||||||||| |||||    
T  13927520 tataaacaaaattcactttttaggttcattcatttaat 13927483  T

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Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 293
Target Start/End: Complemental strand, 16894311 - 16894258
Alignment:
Q  240 tccctccgttgtcaattataaacaaaattaactttttaggttcattcaattaat 293  Q
    |||||||||| | || ||||||||||||| ||||||||| || |||||||||||    
T  16894311 tccctccgtttttaaatataaacaaaattgactttttagatttattcaattaat 16894258  T

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Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 293
Target Start/End: Original strand, 17004957 - 17005010
Alignment:
Q  240 tccctccgttgtcaattataaacaaaattaactttttaggttcattcaattaat 293  Q
    |||||||||| | || ||||| ||||||| | ||||||||||||||||||||||    
T  17004957 tccctccgtttttaaatataagcaaaattgattttttaggttcattcaattaat 17005010  T

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Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 293
Target Start/End: Complemental strand, 17005085 - 17005048
Alignment:
Q  256 tataaacaaaattaactttttaggttcattcaattaat 293  Q
    ||||| ||||||| ||||||||||||||||||||||||    
T  17005085 tataagcaaaattgactttttaggttcattcaattaat 17005048  T

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Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 293
Target Start/End: Complemental strand, 17056632 - 17056595
Alignment:
Q  256 tataaacaaaattaactttttaggttcattcaattaat 293  Q
    ||||| |||||||||||||||||||||||||| |||||    
T  17056632 tataagcaaaattaactttttaggttcattcatttaat 17056595  T

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Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 293
Target Start/End: Original strand, 17940187 - 17940240
Alignment:
Q  240 tccctccgttgtcaattataaacaaaattaactttttaggttcattcaattaat 293  Q
    |||||||||| | || ||||| ||||||| |||||||||||||||||| |||||    
T  17940187 tccctccgtttttaaatataagcaaaatttactttttaggttcattcatttaat 17940240  T

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Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 293
Target Start/End: Complemental strand, 38082639 - 38082602
Alignment:
Q  256 tataaacaaaattaactttttaggttcattcaattaat 293  Q
    ||||||||||||| |||||||||||||||||| |||||    
T  38082639 tataaacaaaattcactttttaggttcattcatttaat 38082602  T

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Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 293
Target Start/End: Complemental strand, 40326563 - 40326526
Alignment:
Q  256 tataaacaaaattaactttttaggttcattcaattaat 293  Q
    ||||| ||||||| ||||||||||||||||||||||||    
T  40326563 tataagcaaaattgactttttaggttcattcaattaat 40326526  T

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Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 293
Target Start/End: Original strand, 44544173 - 44544210
Alignment:
Q  256 tataaacaaaattaactttttaggttcattcaattaat 293  Q
    ||||| ||||||| ||||||||||||||||||||||||    
T  44544173 tataagcaaaattgactttttaggttcattcaattaat 44544210  T

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Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 293
Target Start/End: Original strand, 47342597 - 47342634
Alignment:
Q  256 tataaacaaaattaactttttaggttcattcaattaat 293  Q
    ||||| |||||||||||||||||||||||||| |||||    
T  47342597 tataagcaaaattaactttttaggttcattcatttaat 47342634  T

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Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 293
Target Start/End: Original strand, 51256582 - 51256619
Alignment:
Q  256 tataaacaaaattaactttttaggttcattcaattaat 293  Q
    |||||||||| || ||||||||||||||||||||||||    
T  51256582 tataaacaaattttactttttaggttcattcaattaat 51256619  T

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Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 293
Target Start/End: Original strand, 51486441 - 51486478
Alignment:
Q  256 tataaacaaaattaactttttaggttcattcaattaat 293  Q
    ||||| ||||||| ||||||||||||||||||||||||    
T  51486441 tataagcaaaattgactttttaggttcattcaattaat 51486478  T

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Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 293
Target Start/End: Original strand, 54985538 - 54985575
Alignment:
Q  256 tataaacaaaattaactttttaggttcattcaattaat 293  Q
    ||||||||||||| ||| ||||||||||||||||||||    
T  54985538 tataaacaaaattgactctttaggttcattcaattaat 54985575  T

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Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 256 - 292
Target Start/End: Complemental strand, 4979732 - 4979696
Alignment:
Q  256 tataaacaaaattaactttttaggttcattcaattaa 292  Q
    ||||| |||||||||||||||||||||||| ||||||    
T  4979732 tataagcaaaattaactttttaggttcattaaattaa 4979696  T

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Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 237 - 293
Target Start/End: Complemental strand, 25990793 - 25990737
Alignment:
Q  237 tattccctccgttgtcaattataaacaaaattaactttttaggttcattcaattaat 293  Q
    ||||||||||||| | || ||||| ||||| ||| |||||||||||||||| |||||    
T  25990793 tattccctccgtttttaaatataagcaaaaataattttttaggttcattcatttaat 25990737  T

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Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 237 - 285
Target Start/End: Original strand, 46843632 - 46843680
Alignment:
Q  237 tattccctccgttgtcaattataaacaaaattaactttttaggttcatt 285  Q
    ||||||||||||| | || ||||||||||||| ||||||||| ||||||    
T  46843632 tattccctccgtttttaaatataaacaaaatttactttttagattcatt 46843680  T

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Target: scaffold0063 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 293
Target Start/End: Original strand, 54637 - 54686
Alignment:
Q  244 tccgttgtcaattataaacaaaattaactttttaggttcattcaattaat 293  Q
    |||||||||||||||||| ||| |||| |||||| |||| ||||||||||    
T  54637 tccgttgtcaattataaataaatttaattttttatgttcgttcaattaat 54686  T

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Target: scaffold0036 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 293
Target Start/End: Complemental strand, 36551 - 36498
Alignment:
Q  240 tccctccgttgtcaattataaacaaaattaactttttaggttcattcaattaat 293  Q
    |||||||||| | || ||||| ||||||| |||||||||||||||||| |||||    
T  36551 tccctccgttctaaaatataagcaaaattcactttttaggttcattcatttaat 36498  T

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Target: scaffold1786 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold1786
Description:

Target: scaffold1786; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 253 - 293
Target Start/End: Complemental strand, 638 - 598
Alignment:
Q  253 aattataaacaaaattaactttttaggttcattcaattaat 293  Q
    ||||||||| |||||| || |||||||||||||||||||||    
T  638 aattataaataaaattgacgttttaggttcattcaattaat 598  T

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Target: scaffold0129 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 256 - 292
Target Start/End: Original strand, 43890 - 43926
Alignment:
Q  256 tataaacaaaattaactttttaggttcattcaattaa 292  Q
    ||||| |||||||||||||||||||||||||| ||||    
T  43890 tataagcaaaattaactttttaggttcattcatttaa 43926  T

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