View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16149_low_9 (Length: 482)
Name: NF16149_low_9
Description: NF16149
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16149_low_9 |
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Alignment Details
Target: chr7 (Bit Score: 399; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 399; E-Value: 0
Query Start/End: Original strand, 19 - 475
Target Start/End: Complemental strand, 25693348 - 25692884
Alignment:
| Q |
19 |
aacagacataacaagacaacactgcctgtcacattggcacggattgtacttatttcggcacttgtggttatcgattcctctttacttataataa------ |
112 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
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| T |
25693348 |
aacagacataacaagacaacactgcctgtcacattggcacggattgtacttatttccgcacttgtggttatcgattcctctttacttataataaattaat |
25693249 |
T |
|
| Q |
113 |
--tgacatttttctttgtttatgtttctttcttcattcgaccnnnnnnntgtttctttcttcatttatttttctttggaaaaattgatgctcgattattt |
210 |
Q |
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|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25693248 |
aatgacatttttctttgtttatgtttctttcttcattcgaccaaaaaaatgtttctttcttcatttatttttctttggaaaaattgatgctcgattattt |
25693149 |
T |
|
| Q |
211 |
gcatggtctccttatccatccagcaagattggtttagacgtgggagtgttacgcctcagtttattggccatgtgtgtgttcatgatacaatgtcatatat |
310 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25693148 |
gcatggtctccttatccatccagcaagattggtttagacgtgggagtgttacgcctcagtttattggccatgtgtgtgttcatgatacaatgtcatatat |
25693049 |
T |
|
| Q |
311 |
tatacacggaaatatgcactagttaattgctttggaccttcttgtctcctgcatcacatggggtggaagagaaaattacgtggatagtttatatgcctaa |
410 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
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| T |
25693048 |
tatacacggaaatatgcactagttaattgctttggaccttcttgtctcctgcatcacatggggtggaagagaacattacgtggatagtttatatgcctaa |
25692949 |
T |
|
| Q |
411 |
catttatatttataattacgtgtgtgcgtgtttcagtttaaattaattttaaaggagtgtctgtg |
475 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| |
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| T |
25692948 |
catttatatttataattacgtgtgtgcgtgtttcagtttaaattaattttgaaggagtgtttgtg |
25692884 |
T |
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