View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1614_high_121 (Length: 226)
Name: NF1614_high_121
Description: NF1614
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1614_high_121 |
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Alignment Details
Target: chr1 (Bit Score: 194; Significance: 1e-105; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 18 - 211
Target Start/End: Complemental strand, 48018261 - 48018068
Alignment:
| Q |
18 |
gctatttctaagtagaaggtgtatgtttaattttttagtttccatttggctatactttgatattcattttacccttttcaatctcttgtaacagtcaact |
117 |
Q |
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| T |
48018261 |
gctatttctaagtagaaggtgtatgtttaattttttagtttccatttggctatactttgatattcattttacccttttcaatctcttgtaacagtcaact |
48018162 |
T |
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| Q |
118 |
gggacattcatcgctgcatcaagatttggtggtgcaacacatattccaccttctgtacttagccgtggtgttggctggctggtactatatcatt |
211 |
Q |
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| T |
48018161 |
gggacattcatcgctgcatcaagatttggtggtgcaacacatattccaccttctgtacttagccgtggtgttggctggctggtactatatcatt |
48018068 |
T |
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