View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1614_high_69 (Length: 311)
Name: NF1614_high_69
Description: NF1614
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1614_high_69 |
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Alignment Details
Target: chr5 (Bit Score: 205; Significance: 1e-112; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 16 - 254
Target Start/End: Complemental strand, 19598706 - 19598471
Alignment:
| Q |
16 |
aaaaggacgaagatccaacctaccaagcagacctcaaatcctacaaacgaagggagcatacgactaaggagcaaaaactaacacgacactccaacccgac |
115 |
Q |
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| T |
19598706 |
aaaaggacggagatccaacctaccaagcagacctcaaatcctgcaaacgaagggagcatacgactaaggagcaaaaactaacacgacactccaacccgac |
19598607 |
T |
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| Q |
116 |
acttcattctcgagaaaacatagacatgtgaaagactcttatccagaactttgtgcccgggcattgagatgtcaaacactccaagtcggcgctatgtatc |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||| ||||||||| |
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| T |
19598606 |
acttcattctcgagaaaacatagacatgtgaaagactcttatccagaactttgttcccgggcattgagatgtcaaacactccaagccggcactatgtatc |
19598507 |
T |
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| Q |
216 |
cgagcaaattacctggaaatgtgaaagactccaagcaaa |
254 |
Q |
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||||||| ||||||||||||||||||||||||||||| |
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| T |
19598506 |
cgagcaa---acctggaaatgtgaaagactccaagcaaa |
19598471 |
T |
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