View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1614_high_71 (Length: 308)
Name: NF1614_high_71
Description: NF1614
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1614_high_71 |
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Alignment Details
Target: chr1 (Bit Score: 243; Significance: 1e-135; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 243; E-Value: 1e-135
Query Start/End: Original strand, 10 - 289
Target Start/End: Original strand, 45603935 - 45604218
Alignment:
| Q |
10 |
aatatcccatgaataacatatgaagagtaccatat----agtaattagttcttaatctaaaaatgaaattacatgtgtgtgcacaaaagcaactctagca |
105 |
Q |
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| T |
45603935 |
aatatcccaggaataacatatgaagagcaccatatatatagtaattagttcttaatctaaaaatgaaattacatgtgtgtgcacaaaagcaactctaaca |
45604034 |
T |
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| Q |
106 |
aaataacaaataatttcatgtgtatatggtaaccctgtggatattgaaatcatttgaatttcgtaggaggaatatagtaaatacaatacatgacatacat |
205 |
Q |
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| T |
45604035 |
aaataacaaataatttcatgtgtatatggtaaccctgtggaaattgaaatcatttgaatttggtaggaggaatatagtaaatacaatacattacatacat |
45604134 |
T |
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| Q |
206 |
aattcagtatgtataattcaaagccctcaaacgtacattgcatcattgcttagattgaaattgttacttaaatcaactccaggc |
289 |
Q |
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| T |
45604135 |
aattcagtatgtataattcaaagccctcaaacgtacattgcatcattgcttagattgaaattgttacttaaatcaactccaggc |
45604218 |
T |
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