View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1614_high_79 (Length: 282)
Name: NF1614_high_79
Description: NF1614
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1614_high_79 |
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Alignment Details
Target: chr1 (Bit Score: 191; Significance: 1e-104; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 76 - 266
Target Start/End: Original strand, 36769025 - 36769215
Alignment:
| Q |
76 |
atgagcttgattgatcacaacatatgctcatctaataagatctacattatcacaagaaaactttgagtatacaactccactatgtagacgttactacatg |
175 |
Q |
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| T |
36769025 |
atgagcttgattgatcacaacatatgctcatctaataagatctacattatcacaagaaaactttgagtatacaactccactatgtagacgttactacatg |
36769124 |
T |
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| Q |
176 |
aataatgctacatatacgttgagcatagccatgtaaacttattgctcatacaacagcgatatgtaaaacaacatttcctaccctcaaattt |
266 |
Q |
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| T |
36769125 |
aataatgctacatatacgttgagcatagccatgtaaacttattgctcatacaacagcgatatgtaaaacaacatttcctaccctcaaattt |
36769215 |
T |
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