View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1614_high_80 (Length: 280)
Name: NF1614_high_80
Description: NF1614
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1614_high_80 |
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Alignment Details
Target: chr7 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 10 - 263
Target Start/End: Original strand, 28273078 - 28273331
Alignment:
| Q |
10 |
aagaaaatattttaactgaagcatgtcaagaattttaatttggacgattatcactaatatataaagaagtcactgcattacatcattataatattacggt |
109 |
Q |
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| T |
28273078 |
aagaaaatattttaactgaagcatgtcaagaattttaatttggacgattatcactaatatataaagaagtcactgcattacatcattataatattacggt |
28273177 |
T |
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| Q |
110 |
cattgtacttgtnnnnnnnggcttgagaatttgcttctatggaagttgtaaacatttaagatatctttatggactggtgtggatatcgtaaacacttaca |
209 |
Q |
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|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
28273178 |
cattgtacttgtaaaaaaaggcttgagaatttgcttctatggaagttgtaaacatttaagatatctttatggactggtgtggatatcgtaaacacttaca |
28273277 |
T |
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| Q |
210 |
ttactgcatattacatatactatttgtgttgcgtgtaaaatgaatacatcaatt |
263 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
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| T |
28273278 |
ttactgcatattacatatactatttgtgttgcgtgtaaaatgaataaatcaatt |
28273331 |
T |
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