View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1614_low_135 (Length: 206)
Name: NF1614_low_135
Description: NF1614
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1614_low_135 |
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Alignment Details
Target: chr2 (Bit Score: 147; Significance: 1e-77; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 17 - 191
Target Start/End: Complemental strand, 35211750 - 35211576
Alignment:
| Q |
17 |
actcagaactctttaatttagaattgtgactttcttatttaatttttcaaccaccccgtccaagaaaaaagacaaatacatttgtgcttaaccaaatcat |
116 |
Q |
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| T |
35211750 |
actcagaactctttaatttagaattgtgactttcttatttaatttttcaaccaccccgtccaagaaaaaagacaaatacatttgtgcttaaccaaatcat |
35211651 |
T |
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| Q |
117 |
tatttttattnnnnnnnntaatcactattttaatcccagtcggaaggtaactaaaaccaatatttatgaattcat |
191 |
Q |
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|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
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| T |
35211650 |
tatttttattataaaaaataatcactattttaatcccagtcggaaggtaactaaaaccaatatttgtgaattcat |
35211576 |
T |
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