View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1614_low_25 (Length: 452)
Name: NF1614_low_25
Description: NF1614
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1614_low_25 |
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Alignment Details
Target: chr2 (Bit Score: 426; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 426; E-Value: 0
Query Start/End: Original strand, 1 - 442
Target Start/End: Original strand, 37602844 - 37603285
Alignment:
| Q |
1 |
cttacttcattgtgcaagtgctttggaaagcaatgatataaccttagctcaacaagttatgtgggtcttaaacaacgttgcttcaccattaggtgacaca |
100 |
Q |
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| T |
37602844 |
cttacttcattgtgcaagtgctttggaaagcaatgatataaccttagctcaacaagttatgtgggtcttaaacaacgttgcttcaccattaggtgacact |
37602943 |
T |
|
| Q |
101 |
aaccaaagactcacttcatggtttctgagagcattaatctctagagcttcaaggatttgtcctacttcaatgaatttcaaaggaagtaactacacaattc |
200 |
Q |
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| T |
37602944 |
aaccaaagactcacttcctggtttctaagagcattaatctctagagcttcaaggatttgtcctacttcaatgaatttcaaaggaagtaactacacaattc |
37603043 |
T |
|
| Q |
201 |
aaagaaggttgatgtccgttaccgaactcgccgggtatgttgatttaattccttggcataggtttggtttttgtgcttccaacaatgaaattttcaagtc |
300 |
Q |
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| T |
37603044 |
aaagaagattgatgtccgttaccgaactcgccgggtatgttgatttaattccttggcataggtttggtttttgtgcttccaacaatgaaattttcaagtc |
37603143 |
T |
|
| Q |
301 |
aattaagggattcaaaagggtacatattttagattttagcataacaccttgtatgcaatggcctacttttatagattctttggctaaattaccagaaggc |
400 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37603144 |
aattaagggattcaaaagggtacatattttagattttagcataacaccttgtatgcaatggcctacttttatagattctttggctaaattaccagaaggc |
37603243 |
T |
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| Q |
401 |
cctccttcacttagaatcacagttccatcttttaggcctatg |
442 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| |
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| T |
37603244 |
cctccttcacttagaatcacagttccatcttttaggcctatg |
37603285 |
T |
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