View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1614_low_26 (Length: 452)

Name: NF1614_low_26
Description: NF1614
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1614_low_26
NF1614_low_26
[»] chr3 (54 HSPs)
chr3 (11-415)||(53664769-53665173)
chr3 (383-438)||(3537077-3537132)
chr3 (386-438)||(53620161-53620213)
chr3 (386-428)||(517796-517838)
chr3 (386-428)||(3537427-3537469)
chr3 (384-438)||(49183562-49183616)
chr3 (384-437)||(1133084-1133137)
chr3 (384-437)||(48909032-48909084)
chr3 (384-428)||(44411970-44412014)
chr3 (384-428)||(49861057-49861101)
chr3 (386-438)||(51684496-51684548)
chr3 (386-437)||(32858701-32858752)
chr3 (383-422)||(47789619-47789658)
chr3 (386-428)||(39499419-39499461)
chr3 (386-428)||(47789264-47789306)
chr3 (383-428)||(30121337-30121382)
chr3 (385-422)||(35282960-35282997)
chr3 (386-427)||(55439807-55439848)
chr3 (386-422)||(2927733-2927769)
chr3 (386-438)||(25754257-25754309)
chr3 (386-422)||(38456487-38456523)
chr3 (383-415)||(44400587-44400619)
chr3 (386-438)||(54372720-54372772)
chr3 (387-427)||(55445131-55445171)
chr3 (381-432)||(4604048-4604099)
chr3 (384-415)||(38639469-38639500)
chr3 (381-428)||(39115126-39115173)
chr3 (385-420)||(40119059-40119094)
chr3 (381-428)||(42668263-42668310)
chr3 (382-428)||(3042942-3042988)
chr3 (388-422)||(24588450-24588484)
chr3 (390-428)||(49682824-49682862)
chr3 (386-428)||(52620653-52620695)
chr3 (380-417)||(1132752-1132789)
chr3 (385-422)||(3706976-3707013)
chr3 (385-418)||(27921833-27921866)
chr3 (389-422)||(34729498-34729531)
chr3 (386-415)||(36598124-36598153)
chr3 (383-428)||(36796646-36796691)
chr3 (386-415)||(37674310-37674339)
chr3 (386-419)||(43237520-43237553)
chr3 (384-425)||(47359548-47359589)
chr3 (383-412)||(49855985-49856014)
chr3 (386-415)||(53664426-53664455)
chr3 (384-432)||(13279109-13279157)
chr3 (386-422)||(29623108-29623144)
chr3 (386-422)||(32859066-32859102)
chr3 (383-415)||(33944809-33944841)
chr3 (382-422)||(38515464-38515504)
chr3 (385-421)||(38592851-38592887)
chr3 (384-416)||(43007344-43007376)
chr3 (382-422)||(45555867-45555907)
chr3 (386-438)||(50948077-50948129)
chr3 (386-422)||(54126155-54126191)
[»] chr2 (54 HSPs)
chr2 (386-438)||(11514916-11514968)
chr2 (386-438)||(43572705-43572757)
chr2 (386-438)||(6655990-6656042)
chr2 (382-438)||(39750026-39750082)
chr2 (384-438)||(13018635-13018689)
chr2 (381-438)||(16519245-16519302)
chr2 (390-438)||(15555502-15555550)
chr2 (386-437)||(16813508-16813559)
chr2 (386-437)||(16852787-16852838)
chr2 (388-438)||(16625938-16625988)
chr2 (380-438)||(18780248-18780306)
chr2 (383-437)||(32761432-32761486)
chr2 (386-438)||(4003300-4003352)
chr2 (381-428)||(1726117-1726164)
chr2 (390-437)||(37194142-37194189)
chr2 (384-422)||(14008145-14008183)
chr2 (392-438)||(34757483-34757529)
chr2 (383-424)||(21625993-21626034)
chr2 (383-415)||(1364712-1364744)
chr2 (383-415)||(5322288-5322320)
chr2 (383-415)||(11515278-11515310)
chr2 (380-428)||(18781640-18781688)
chr2 (381-417)||(36870130-36870166)
chr2 (386-422)||(37201788-37201824)
chr2 (383-415)||(39204821-39204853)
chr2 (382-425)||(11950224-11950267)
chr2 (386-437)||(14008486-14008537)
chr2 (380-427)||(16625626-16625673)
chr2 (384-438)||(31082688-31082740)
chr2 (381-428)||(36567091-36567138)
chr2 (381-420)||(44137024-44137063)
chr2 (386-428)||(1365044-1365086)
chr2 (383-437)||(8991119-8991173)
chr2 (388-422)||(11522339-11522373)
chr2 (386-420)||(18826049-18826083)
chr2 (382-432)||(31369037-31369087)
chr2 (386-428)||(44137298-44137340)
chr2 (383-420)||(26599403-26599440)
chr2 (386-415)||(34757830-34757859)
chr2 (384-437)||(35550313-35550366)
chr2 (383-420)||(38293758-38293795)
chr2 (389-422)||(39180955-39180988)
chr2 (383-428)||(41655222-41655267)
chr2 (384-432)||(2981454-2981502)
chr2 (384-428)||(7367799-7367843)
chr2 (384-432)||(11914154-11914202)
chr2 (384-428)||(15803393-15803437)
chr2 (386-422)||(30312244-30312280)
chr2 (384-420)||(30312575-30312611)
chr2 (386-438)||(31550406-31550458)
chr2 (383-423)||(31899171-31899211)
chr2 (390-422)||(38294115-38294147)
chr2 (386-438)||(40211876-40211928)
chr2 (386-422)||(40357684-40357720)
[»] chr7 (43 HSPs)
chr7 (383-438)||(15749106-15749161)
chr7 (386-438)||(38505491-38505543)
chr7 (383-438)||(16805724-16805779)
chr7 (383-437)||(4058297-4058351)
chr7 (380-428)||(33872221-33872269)
chr7 (383-438)||(42253829-42253884)
chr7 (384-427)||(46442579-46442622)
chr7 (384-428)||(7666980-7667024)
chr7 (384-432)||(19679413-19679461)
chr7 (383-438)||(2826403-2826458)
chr7 (386-428)||(28437359-28437401)
chr7 (386-424)||(30081238-30081276)
chr7 (386-428)||(33871778-33871820)
chr7 (386-428)||(34651871-34651913)
chr7 (384-422)||(38236019-38236057)
chr7 (384-422)||(41471375-41471413)
chr7 (386-436)||(42854120-42854170)
chr7 (381-422)||(33406805-33406846)
chr7 (383-428)||(38505159-38505204)
chr7 (383-420)||(42382924-42382961)
chr7 (390-422)||(19791563-19791595)
chr7 (382-437)||(7391566-7391620)
chr7 (386-437)||(7667323-7667374)
chr7 (386-437)||(10592108-10592159)
chr7 (386-437)||(36747168-36747219)
chr7 (384-422)||(425272-425310)
chr7 (383-417)||(30183717-30183751)
chr7 (383-437)||(32650538-32650592)
chr7 (384-422)||(42267182-42267220)
chr7 (380-417)||(36747532-36747569)
chr7 (383-432)||(37572074-37572123)
chr7 (386-415)||(38137822-38137851)
chr7 (393-438)||(43741586-43741631)
chr7 (384-428)||(3658327-3658371)
chr7 (386-422)||(3658684-3658720)
chr7 (386-438)||(6746723-6746775)
chr7 (382-422)||(17768191-17768231)
chr7 (384-424)||(23465816-23465856)
chr7 (386-438)||(30080844-30080896)
chr7 (384-420)||(33113811-33113847)
chr7 (383-415)||(34379245-34379277)
chr7 (384-428)||(43189078-43189122)
chr7 (381-413)||(46611982-46612014)
[»] chr6 (18 HSPs)
chr6 (383-438)||(1567150-1567205)
chr6 (388-438)||(32719532-32719582)
chr6 (384-422)||(26713733-26713771)
chr6 (386-428)||(29241651-29241693)
chr6 (384-428)||(4909696-4909740)
chr6 (384-420)||(5825561-5825597)
chr6 (390-438)||(6855511-6855559)
chr6 (386-425)||(33590497-33590536)
chr6 (384-438)||(12779387-12779440)
chr6 (382-424)||(14201824-14201866)
chr6 (386-420)||(24734759-24734793)
chr6 (383-417)||(25073428-25073462)
chr6 (383-432)||(16803018-16803067)
chr6 (381-422)||(24735109-24735150)
chr6 (389-438)||(24875089-24875138)
chr6 (386-422)||(2365770-2365806)
chr6 (386-422)||(23094947-23094983)
chr6 (382-422)||(31345183-31345223)
[»] chr8 (44 HSPs)
chr8 (380-437)||(79772-79829)
chr8 (384-438)||(21174014-21174068)
chr8 (386-438)||(23932714-23932766)
chr8 (386-438)||(26772798-26772850)
chr8 (386-438)||(14581904-14581956)
chr8 (386-438)||(21262732-21262784)
chr8 (384-428)||(36906410-36906454)
chr8 (383-438)||(3404730-3404785)
chr8 (383-422)||(34148395-34148434)
chr8 (386-428)||(1839638-1839680)
chr8 (387-428)||(79439-79480)
chr8 (383-428)||(1839986-1840031)
chr8 (384-437)||(12506350-12506402)
chr8 (383-428)||(37659348-37659393)
chr8 (386-422)||(1941868-1941904)
chr8 (384-428)||(34349936-34349980)
chr8 (383-422)||(1942205-1942244)
chr8 (381-428)||(33230859-33230906)
chr8 (382-428)||(1111051-1111097)
chr8 (386-428)||(1111293-1111335)
chr8 (388-438)||(3635633-3635683)
chr8 (384-414)||(12319123-12319153)
chr8 (382-432)||(28722863-28722913)
chr8 (382-432)||(28730505-28730555)
chr8 (382-428)||(29584395-29584441)
chr8 (383-433)||(30591772-30591822)
chr8 (396-438)||(43239552-43239594)
chr8 (386-423)||(3393887-3393924)
chr8 (385-422)||(4074857-4074894)
chr8 (389-418)||(31149799-31149828)
chr8 (386-422)||(34553302-34553339)
chr8 (383-412)||(38676396-38676425)
chr8 (382-418)||(4734310-4734346)
chr8 (383-415)||(4873397-4873429)
chr8 (386-438)||(8228406-8228458)
chr8 (382-422)||(13227942-13227982)
chr8 (386-422)||(13406301-13406337)
chr8 (383-415)||(21258800-21258832)
chr8 (390-422)||(25033607-25033639)
chr8 (388-428)||(27030031-27030071)
chr8 (386-414)||(27085220-27085248)
chr8 (386-422)||(34272386-34272422)
chr8 (391-438)||(35616437-35616485)
chr8 (390-438)||(37659688-37659736)
[»] scaffold0136 (2 HSPs)
scaffold0136 (382-438)||(2179-2235)
scaffold0136 (384-432)||(13814-13862)
[»] chr1 (56 HSPs)
chr1 (386-438)||(36886742-36886794)
chr1 (386-438)||(34154485-34154537)
chr1 (386-438)||(36269615-36269667)
chr1 (384-437)||(37649774-37649827)
chr1 (382-422)||(17556536-17556576)
chr1 (386-437)||(29091959-29092010)
chr1 (383-422)||(45565356-45565395)
chr1 (384-438)||(39179263-39179317)
chr1 (384-422)||(52073621-52073659)
chr1 (384-437)||(17760634-17760687)
chr1 (389-438)||(31920172-31920221)
chr1 (383-428)||(32299324-32299369)
chr1 (383-428)||(32300276-32300321)
chr1 (382-422)||(9595788-9595828)
chr1 (383-438)||(27255078-27255133)
chr1 (383-422)||(41432944-41432983)
chr1 (386-428)||(33991763-33991805)
chr1 (386-428)||(40136436-40136478)
chr1 (386-428)||(43571787-43571829)
chr1 (388-438)||(52068297-52068347)
chr1 (381-438)||(12293677-12293734)
chr1 (385-422)||(38795192-38795229)
chr1 (384-428)||(1688033-1688077)
chr1 (383-415)||(5584384-5584416)
chr1 (386-422)||(49103124-49103160)
chr1 (383-422)||(2925752-2925791)
chr1 (384-415)||(5584744-5584775)
chr1 (383-438)||(26940475-26940530)
chr1 (383-414)||(47742405-47742436)
chr1 (383-438)||(47905846-47905901)
chr1 (384-418)||(666251-666285)
chr1 (386-428)||(896315-896357)
chr1 (382-420)||(40707373-40707411)
chr1 (386-428)||(42161872-42161914)
chr1 (387-425)||(44699791-44699829)
chr1 (386-420)||(51303348-51303382)
chr1 (386-415)||(2909021-2909050)
chr1 (383-428)||(2909338-2909383)
chr1 (383-412)||(7915392-7915421)
chr1 (381-422)||(8156154-8156195)
chr1 (378-419)||(15463688-15463729)
chr1 (383-428)||(27500205-27500250)
chr1 (381-410)||(36887108-36887137)
chr1 (380-417)||(43036135-43036172)
chr1 (383-420)||(43572126-43572163)
chr1 (383-432)||(48187519-48187568)
chr1 (383-416)||(50476761-50476794)
chr1 (383-419)||(896666-896702)
chr1 (386-422)||(15464038-15464074)
chr1 (389-437)||(28718950-28718998)
chr1 (383-415)||(34154153-34154185)
chr1 (384-432)||(44773972-44774020)
chr1 (383-415)||(49534514-49534546)
chr1 (384-412)||(50162016-50162044)
chr1 (386-422)||(50247823-50247859)
chr1 (386-438)||(50586920-50586972)
[»] chr5 (32 HSPs)
chr5 (384-438)||(35683630-35683684)
chr5 (384-437)||(5772877-5772930)
chr5 (386-438)||(10437858-10437910)
chr5 (386-438)||(13569261-13569313)
chr5 (386-438)||(18670905-18670957)
chr5 (381-432)||(9684604-9684655)
chr5 (386-437)||(39649442-39649493)
chr5 (381-419)||(6491081-6491119)
chr5 (386-422)||(1935237-1935273)
chr5 (383-422)||(35708926-35708965)
chr5 (383-438)||(43496376-43496431)
chr5 (386-428)||(10295707-10295749)
chr5 (384-438)||(35700930-35700984)
chr5 (387-420)||(9096195-9096228)
chr5 (386-438)||(18675869-18675921)
chr5 (386-422)||(25598587-25598623)
chr5 (386-422)||(32824535-32824571)
chr5 (386-422)||(38120013-38120049)
chr5 (384-428)||(38302176-38302220)
chr5 (385-428)||(25027143-25027186)
chr5 (384-422)||(1658403-1658441)
chr5 (386-432)||(6620456-6620502)
chr5 (386-420)||(17093126-17093160)
chr5 (383-424)||(4373559-4373600)
chr5 (386-415)||(5772548-5772577)
chr5 (382-422)||(2163907-2163947)
chr5 (383-415)||(6922090-6922122)
chr5 (388-428)||(10955860-10955900)
chr5 (384-428)||(12229630-12229674)
chr5 (390-422)||(27479989-27480021)
chr5 (386-414)||(35683291-35683319)
chr5 (384-428)||(38568195-38568239)
[»] chr4 (63 HSPs)
chr4 (388-438)||(16318491-16318541)
chr4 (381-438)||(33500387-33500444)
chr4 (386-437)||(29114392-29114443)
chr4 (388-438)||(38136991-38137041)
chr4 (384-437)||(12708992-12709045)
chr4 (390-438)||(28175621-28175669)
chr4 (384-437)||(27485400-27485453)
chr4 (386-438)||(675243-675295)
chr4 (386-438)||(45823427-45823479)
chr4 (383-438)||(31187251-31187306)
chr4 (383-438)||(41709274-41709329)
chr4 (390-437)||(43793301-43793348)
chr4 (386-428)||(20534148-20534190)
chr4 (386-428)||(22845050-22845092)
chr4 (386-428)||(31530244-31530286)
chr4 (388-422)||(35959072-35959106)
chr4 (383-437)||(46177085-46177139)
chr4 (381-438)||(7182348-7182405)
chr4 (383-428)||(17622288-17622333)
chr4 (381-422)||(21081212-21081253)
chr4 (383-428)||(37756534-37756579)
chr4 (388-425)||(42650517-42650554)
chr4 (390-438)||(16422795-16422843)
chr4 (384-428)||(38136650-38136694)
chr4 (384-428)||(41363628-41363672)
chr4 (386-422)||(41844662-41844698)
chr4 (381-425)||(44076465-44076509)
chr4 (386-422)||(52636633-52636669)
chr4 (383-422)||(7182002-7182041)
chr4 (385-428)||(32060867-32060910)
chr4 (383-422)||(32648819-32648858)
chr4 (383-422)||(38365898-38365937)
chr4 (383-422)||(42759812-42759851)
chr4 (382-425)||(45899259-45899302)
chr4 (386-417)||(52430732-52430763)
chr4 (386-437)||(54806347-54806398)
chr4 (386-428)||(24280132-24280174)
chr4 (384-438)||(32948674-32948728)
chr4 (384-422)||(36151187-36151225)
chr4 (386-428)||(38366247-38366289)
chr4 (381-415)||(40632307-40632341)
chr4 (382-432)||(44232989-44233039)
chr4 (386-420)||(45899511-45899545)
chr4 (386-428)||(48620501-48620543)
chr4 (388-438)||(49668260-49668310)
chr4 (387-424)||(30198942-30198979)
chr4 (383-420)||(41844311-41844348)
chr4 (384-417)||(42650864-42650897)
chr4 (383-420)||(49936388-49936425)
chr4 (383-428)||(50643044-50643089)
chr4 (387-420)||(54205707-54205740)
chr4 (384-420)||(904072-904108)
chr4 (384-432)||(8084994-8085042)
chr4 (383-415)||(12685879-12685911)
chr4 (384-428)||(16535912-16535956)
chr4 (386-422)||(21357980-21358016)
chr4 (383-415)||(28511493-28511525)
chr4 (384-428)||(29114059-29114103)
chr4 (386-422)||(31340659-31340695)
chr4 (386-438)||(41363969-41364021)
chr4 (381-417)||(43793957-43793993)
chr4 (384-428)||(55510125-55510169)
chr4 (384-432)||(56205255-56205303)
[»] scaffold0128 (1 HSPs)
scaffold0128 (386-438)||(26251-26303)
[»] scaffold0051 (2 HSPs)
scaffold0051 (386-437)||(6916-6967)
scaffold0051 (386-437)||(7899-7950)
[»] scaffold0248 (1 HSPs)
scaffold0248 (388-437)||(354-403)
[»] scaffold0388 (1 HSPs)
scaffold0388 (389-437)||(6940-6987)
[»] scaffold1163 (1 HSPs)
scaffold1163 (387-438)||(1931-1982)
[»] scaffold0717 (1 HSPs)
scaffold0717 (386-428)||(1800-1842)
[»] scaffold0028 (1 HSPs)
scaffold0028 (386-428)||(35273-35315)
[»] scaffold0026 (1 HSPs)
scaffold0026 (384-437)||(82869-82922)
[»] scaffold0031 (1 HSPs)
scaffold0031 (383-415)||(93676-93708)
[»] scaffold1562 (1 HSPs)
scaffold1562 (389-428)||(361-400)
[»] scaffold1158 (1 HSPs)
scaffold1158 (389-428)||(2193-2232)
[»] scaffold0036 (1 HSPs)
scaffold0036 (386-437)||(82667-82718)
[»] scaffold0006 (1 HSPs)
scaffold0006 (386-425)||(59672-59711)
[»] scaffold0636 (1 HSPs)
scaffold0636 (382-428)||(8612-8658)
[»] scaffold0059 (1 HSPs)
scaffold0059 (383-413)||(17673-17703)
[»] scaffold0048 (1 HSPs)
scaffold0048 (381-415)||(44373-44407)
[»] scaffold0598 (1 HSPs)
scaffold0598 (389-438)||(9557-9606)
[»] scaffold0087 (1 HSPs)
scaffold0087 (383-415)||(9936-9968)
[»] scaffold0063 (1 HSPs)
scaffold0063 (383-415)||(4063-4095)


Alignment Details
Target: chr3 (Bit Score: 385; Significance: 0; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 385; E-Value: 0
Query Start/End: Original strand, 11 - 415
Target Start/End: Complemental strand, 53665173 - 53664769
Alignment:
Q  11 cacagagagttgttgtaatatcaaagttgtcagttctgaatggaatcaaaatggaaagcagaaacaaaagattgaagtttacctcaaagttcttagtcga 110  Q
    ||||||||||||||| |||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53665173 cacagagagttgttgcaatatcaaagctatcagttctgaatggaatcaaaatggaaagcagaaacaaaagattgaagtttacctcaaagttcttagtcga 53665074  T
Q  111 cttagggaattgaatgttcctgagattatggctcccggttttgaggatgatctttgggcgcatttctatcgtcttcccactaggtaccttcaaacccatt 210  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53665073 cttagggaattgaatgttcctgagattatggctcccggttttgaggatgatctttgggcgcatttctatcgtcttcccactaggtaccttcaaacccatt 53664974  T
Q  211 ctctcaccacttcatcattcttgcttcccacattcttgctttattctgaatgtaggtataatgttgaccgcgacatgtttgaatattctatagttgaatt 310  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  53664973 ctctcaccacttcatcattcttgcttcccacattcttgctttattctgaatgtaggtataacgttgaccgcgacatgtttgaatattctatagttgaatt 53664874  T
Q  311 gattttaattgtaaaataaaattttaagcttttgcaaccaaataattgggtttaagtgattaatgagctccactaaggctttgtttgcgagtttggaggg 410  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53664873 gattttaattgtaaaataaaattttaagcttttgcaactaaataattgggtttaagtgattaatgagctccactaaggctttgtttgcgagtttggaggg 53664774  T
Q  411 gaagg 415  Q
    |||||    
T  53664773 gaagg 53664769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 383 - 438
Target Start/End: Original strand, 3537077 - 3537132
Alignment:
Q  383 ctaaggctttgtttgcgagtttggaggggaagggaggggaaggcttaggaaaaaag 438  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||  ||||||||    
T  3537077 ctaagactttgtttgcgagtttggaggggaagggaggggaaggctttagaaaaaag 3537132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 386 - 438
Target Start/End: Original strand, 53620161 - 53620213
Alignment:
Q  386 aggctttgtttgcgagtttggaggggaagggaggggaaggcttaggaaaaaag 438  Q
    |||||||||||||||||||||||||||||||||| || ||||| |||||||||    
T  53620161 aggctttgtttgcgagtttggaggggaagggaggtgagggctttggaaaaaag 53620213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 386 - 428
Target Start/End: Complemental strand, 517838 - 517796
Alignment:
Q  386 aggctttgtttgcgagtttggaggggaagggaggggaaggctt 428  Q
    ||||||||||||||||||||||||||||||||||| |||||||    
T  517838 aggctttgtttgcgagtttggaggggaagggagggaaaggctt 517796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 386 - 428
Target Start/End: Complemental strand, 3537469 - 3537427
Alignment:
Q  386 aggctttgtttgcgagtttggaggggaagggaggggaaggctt 428  Q
    |||||||||||| ||||||||||||||||||||||||||||||    
T  3537469 aggctttgtttgggagtttggaggggaagggaggggaaggctt 3537427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 384 - 438
Target Start/End: Original strand, 49183562 - 49183616
Alignment:
Q  384 taaggctttgtttgcgagtttggaggggaagggaggggaaggcttaggaaaaaag 438  Q
    |||||||||||||| ||||||||||||||| ||||||||||| || |||||||||    
T  49183562 taaggctttgtttgtgagtttggaggggaatggaggggaaggtttgggaaaaaag 49183616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 384 - 437
Target Start/End: Complemental strand, 1133137 - 1133084
Alignment:
Q  384 taaggctttgtttgcgagtttggaggggaagggaggggaaggcttaggaaaaaa 437  Q
    |||||||||||||||||||||| |||||||||||||||| || || ||||||||    
T  1133137 taaggctttgtttgcgagtttgtaggggaagggaggggaggggtttggaaaaaa 1133084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 384 - 437
Target Start/End: Complemental strand, 48909084 - 48909032
Alignment:
Q  384 taaggctttgtttgcgagtttggaggggaagggaggggaaggcttaggaaaaaa 437  Q
    ||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||    
T  48909084 taaggctttgtttgcaagtttggaggggaagggaggggaagactt-ggaaaaaa 48909032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 384 - 428
Target Start/End: Original strand, 44411970 - 44412014
Alignment:
Q  384 taaggctttgtttgcgagtttggaggggaagggaggggaaggctt 428  Q
    |||||||||||||| |||||||||||||||||||||||| |||||    
T  44411970 taaggctttgtttgggagtttggaggggaagggaggggagggctt 44412014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 384 - 428
Target Start/End: Complemental strand, 49861101 - 49861057
Alignment:
Q  384 taaggctttgtttgcgagtttggaggggaagggaggggaaggctt 428  Q
    |||||||||||||| |||||||||||||||||||||||| |||||    
T  49861101 taaggctttgtttgggagtttggaggggaagggaggggagggctt 49861057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 386 - 438
Target Start/End: Original strand, 51684496 - 51684548
Alignment:
Q  386 aggctttgtttgcgagtttggaggggaagggaggggaaggcttaggaaaaaag 438  Q
    ||||||| ||||||||||||||||||||| ||||||||| ||| |||||||||    
T  51684496 aggctttatttgcgagtttggaggggaagagaggggaagacttgggaaaaaag 51684548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 386 - 437
Target Start/End: Original strand, 32858701 - 32858752
Alignment:
Q  386 aggctttgtttgcgagtttggaggggaagggaggggaaggcttaggaaaaaa 437  Q
    |||||||||||||||||||||||||||||| |||||| || || ||||||||    
T  32858701 aggctttgtttgcgagtttggaggggaaggaaggggaggggtttggaaaaaa 32858752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 383 - 422
Target Start/End: Complemental strand, 47789658 - 47789619
Alignment:
Q  383 ctaaggctttgtttgcgagtttggaggggaagggagggga 422  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  47789658 ctaaggctttgtttgggagtttggaggggaagggagggga 47789619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 386 - 428
Target Start/End: Complemental strand, 39499461 - 39499419
Alignment:
Q  386 aggctttgtttgcgagtttggaggggaagggaggggaaggctt 428  Q
    |||||||||||| |||||||||||||||||||||||| |||||    
T  39499461 aggctttgtttgggagtttggaggggaagggaggggagggctt 39499419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 386 - 428
Target Start/End: Original strand, 47789264 - 47789306
Alignment:
Q  386 aggctttgtttgcgagtttggaggggaagggaggggaaggctt 428  Q
    |||||||||||| |||||||||||||||||||||||| |||||    
T  47789264 aggctttgtttgggagtttggaggggaagggaggggagggctt 47789306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 383 - 428
Target Start/End: Original strand, 30121337 - 30121382
Alignment:
Q  383 ctaaggctttgtttgcgagtttggaggggaagggaggggaaggctt 428  Q
    ||||||||||||||| |||||||||||||| ||||||||| |||||    
T  30121337 ctaaggctttgtttgggagtttggaggggaggggaggggagggctt 30121382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 385 - 422
Target Start/End: Original strand, 35282960 - 35282997
Alignment:
Q  385 aaggctttgtttgcgagtttggaggggaagggagggga 422  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  35282960 aaggctttgtttgcgagtttggaggggaaggaagggga 35282997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 386 - 427
Target Start/End: Complemental strand, 55439848 - 55439807
Alignment:
Q  386 aggctttgtttgcgagtttggaggggaagggaggggaaggct 427  Q
    |||||||||||| |||||||||||||||||||||||| ||||    
T  55439848 aggctttgtttgggagtttggaggggaagggaggggagggct 55439807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 386 - 422
Target Start/End: Original strand, 2927733 - 2927769
Alignment:
Q  386 aggctttgtttgcgagtttggaggggaagggagggga 422  Q
    |||||||||||||||||||| ||||||||||||||||    
T  2927733 aggctttgtttgcgagtttgcaggggaagggagggga 2927769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 386 - 438
Target Start/End: Complemental strand, 25754309 - 25754257
Alignment:
Q  386 aggctttgtttgcgagtttggaggggaagggaggggaaggcttaggaaaaaag 438  Q
    |||||||||||||||||||||| | |||||||||||||| ||| | |||||||    
T  25754309 aggctttgtttgcgagtttggatgagaagggaggggaagtcttggaaaaaaag 25754257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 386 - 422
Target Start/End: Original strand, 38456487 - 38456523
Alignment:
Q  386 aggctttgtttgcgagtttggaggggaagggagggga 422  Q
    |||||||||||| ||||||||||||||||||||||||    
T  38456487 aggctttgtttgggagtttggaggggaagggagggga 38456523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 383 - 415
Target Start/End: Original strand, 44400587 - 44400619
Alignment:
Q  383 ctaaggctttgtttgcgagtttggaggggaagg 415  Q
    |||||||||||||||||||||||||||||||||    
T  44400587 ctaaggctttgtttgcgagtttggaggggaagg 44400619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 386 - 438
Target Start/End: Complemental strand, 54372772 - 54372720
Alignment:
Q  386 aggctttgtttgcgagtttggaggggaagggaggggaaggcttaggaaaaaag 438  Q
    |||||||||||| ||||||| ||||||||| |||||||||||| || ||||||    
T  54372772 aggctttgtttgtgagtttgaaggggaaggtaggggaaggctttgggaaaaag 54372720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 387 - 427
Target Start/End: Complemental strand, 55445171 - 55445131
Alignment:
Q  387 ggctttgtttgcgagtttggaggggaagggaggggaaggct 427  Q
    ||||||||||| |||||||||||||||||||||||| ||||    
T  55445171 ggctttgtttgggagtttggaggggaagggaggggagggct 55445131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 381 - 432
Target Start/End: Original strand, 4604048 - 4604099
Alignment:
Q  381 cactaaggctttgtttgcgagtttggaggggaagggaggggaaggcttagga 432  Q
    |||||||||||||||||||||||| |||||||||| | || |||||| ||||    
T  4604048 cactaaggctttgtttgcgagttttgaggggaaggaaaggaaaggctaagga 4604099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 415
Target Start/End: Original strand, 38639469 - 38639500
Alignment:
Q  384 taaggctttgtttgcgagtttggaggggaagg 415  Q
    ||||||||||||||||||||||||||||||||    
T  38639469 taaggctttgtttgcgagtttggaggggaagg 38639500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 381 - 428
Target Start/End: Complemental strand, 39115173 - 39115126
Alignment:
Q  381 cactaaggctttgtttgcgagtttggaggggaagggaggggaaggctt 428  Q
    |||| |||||||||||| |||||||||||| ||||||||||| |||||    
T  39115173 cacttaggctttgtttgtgagtttggagggaaagggaggggatggctt 39115126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 385 - 420
Target Start/End: Complemental strand, 40119094 - 40119059
Alignment:
Q  385 aaggctttgtttgcgagtttggaggggaagggaggg 420  Q
    |||||||||||||||||||||||||||| |||||||    
T  40119094 aaggctttgtttgcgagtttggaggggaggggaggg 40119059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 381 - 428
Target Start/End: Complemental strand, 42668310 - 42668263
Alignment:
Q  381 cactaaggctttgtttgcgagtttggaggggaagggaggggaaggctt 428  Q
    ||||||||||||||||| |||||||||| |||||||| |||| |||||    
T  42668310 cactaaggctttgtttgtgagtttggagaggaagggaagggagggctt 42668263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 382 - 428
Target Start/End: Original strand, 3042942 - 3042988
Alignment:
Q  382 actaaggctttgtttgcgagtttggaggggaagggaggggaaggctt 428  Q
    |||||||||||||||| |||||||||||||||| || |||| |||||    
T  3042942 actaaggctttgtttgggagtttggaggggaagagatgggagggctt 3042988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 388 - 422
Target Start/End: Complemental strand, 24588484 - 24588450
Alignment:
Q  388 gctttgtttgcgagtttggaggggaagggagggga 422  Q
    |||||||||||||||||||||||||||| ||||||    
T  24588484 gctttgtttgcgagtttggaggggaaggcagggga 24588450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 390 - 428
Target Start/End: Original strand, 49682824 - 49682862
Alignment:
Q  390 tttgtttgcgagtttggaggggaagggaggggaaggctt 428  Q
    |||||||| |||||||||||||||||||||||| |||||    
T  49682824 tttgtttgtgagtttggaggggaagggaggggagggctt 49682862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 386 - 428
Target Start/End: Original strand, 52620653 - 52620695
Alignment:
Q  386 aggctttgtttgcgagtttggaggggaagggaggggaaggctt 428  Q
    |||||||||||| |||||||||||||| ||||||||| |||||    
T  52620653 aggctttgtttgggagtttggaggggaggggaggggagggctt 52620695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 380 - 417
Target Start/End: Original strand, 1132752 - 1132789
Alignment:
Q  380 ccactaaggctttgtttgcgagtttggaggggaaggga 417  Q
    ||||| |||||||||||| |||||||||||||||||||    
T  1132752 ccacttaggctttgtttgggagtttggaggggaaggga 1132789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 422
Target Start/End: Original strand, 3706976 - 3707013
Alignment:
Q  385 aaggctttgtttgcgagtttggaggggaagggagggga 422  Q
    |||||||||||||||||||| ||||| |||||||||||    
T  3706976 aaggctttgtttgcgagtttagagggaaagggagggga 3707013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 418
Target Start/End: Original strand, 27921833 - 27921866
Alignment:
Q  385 aaggctttgtttgcgagtttggaggggaagggag 418  Q
    |||| |||||||||||||||||||||||||||||    
T  27921833 aaggttttgtttgcgagtttggaggggaagggag 27921866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 389 - 422
Target Start/End: Complemental strand, 34729531 - 34729498
Alignment:
Q  389 ctttgtttgcgagtttggaggggaagggagggga 422  Q
    ||||||||||||||||||||| ||||||||||||    
T  34729531 ctttgtttgcgagtttggaggtgaagggagggga 34729498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 386 - 415
Target Start/End: Original strand, 36598124 - 36598153
Alignment:
Q  386 aggctttgtttgcgagtttggaggggaagg 415  Q
    ||||||||||||||||||||||||||||||    
T  36598124 aggctttgtttgcgagtttggaggggaagg 36598153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 428
Target Start/End: Complemental strand, 36796691 - 36796646
Alignment:
Q  383 ctaaggctttgtttgcgagtttggaggggaagggaggggaaggctt 428  Q
    ||||||||||||||| |||||||||||  ||||||||||| |||||    
T  36796691 ctaaggctttgtttgggagtttggaggaaaagggaggggagggctt 36796646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 386 - 415
Target Start/End: Complemental strand, 37674339 - 37674310
Alignment:
Q  386 aggctttgtttgcgagtttggaggggaagg 415  Q
    ||||||||||||||||||||||||||||||    
T  37674339 aggctttgtttgcgagtttggaggggaagg 37674310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 386 - 419
Target Start/End: Complemental strand, 43237553 - 43237520
Alignment:
Q  386 aggctttgtttgcgagtttggaggggaagggagg 419  Q
    |||||||||||| |||||||||||||||||||||    
T  43237553 aggctttgtttgggagtttggaggggaagggagg 43237520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 384 - 425
Target Start/End: Complemental strand, 47359589 - 47359548
Alignment:
Q  384 taaggctttgtttgcgagtttggaggggaagggaggggaagg 425  Q
    ||||||||||||||||||||  || |||||||||||||||||    
T  47359589 taaggctttgtttgcgagttcagaagggaagggaggggaagg 47359548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 412
Target Start/End: Complemental strand, 49856014 - 49855985
Alignment:
Q  383 ctaaggctttgtttgcgagtttggagggga 412  Q
    ||||||||||||||||||||||||||||||    
T  49856014 ctaaggctttgtttgcgagtttggagggga 49855985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 386 - 415
Target Start/End: Original strand, 53664426 - 53664455
Alignment:
Q  386 aggctttgtttgcgagtttggaggggaagg 415  Q
    ||||||||||||||||||||||||||||||    
T  53664426 aggctttgtttgcgagtttggaggggaagg 53664455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 384 - 432
Target Start/End: Complemental strand, 13279157 - 13279109
Alignment:
Q  384 taaggctttgtttgcgagtttggaggggaagggaggggaaggcttagga 432  Q
    ||||||||||||||||||||| |||||||||| | || |||||| ||||    
T  13279157 taaggctttgtttgcgagttttgaggggaaggaaaggaaaggctaagga 13279109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 386 - 422
Target Start/End: Original strand, 29623108 - 29623144
Alignment:
Q  386 aggctttgtttgcgagtttggaggggaagggagggga 422  Q
    ||||||||||||||||||| ||||||||| |||||||    
T  29623108 aggctttgtttgcgagtttagaggggaagagagggga 29623144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 386 - 422
Target Start/End: Complemental strand, 32859102 - 32859066
Alignment:
Q  386 aggctttgtttgcgagtttggaggggaagggagggga 422  Q
    |||||||||||| |||||||||||||| |||||||||    
T  32859102 aggctttgtttgggagtttggaggggaggggagggga 32859066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 383 - 415
Target Start/End: Complemental strand, 33944841 - 33944809
Alignment:
Q  383 ctaaggctttgtttgcgagtttggaggggaagg 415  Q
    |||| ||||||||||||||||||||||||||||    
T  33944841 ctaaagctttgtttgcgagtttggaggggaagg 33944809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 382 - 422
Target Start/End: Complemental strand, 38515504 - 38515464
Alignment:
Q  382 actaaggctttgtttgcgagtttggaggggaagggagggga 422  Q
    ||||||||||||||||  | |||||||||||||||||||||    
T  38515504 actaaggctttgtttggaaatttggaggggaagggagggga 38515464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 421
Target Start/End: Original strand, 38592851 - 38592887
Alignment:
Q  385 aaggctttgtttgcgagtttggaggggaagggagggg 421  Q
    ||||||||||||| |||||||||||||| ||||||||    
T  38592851 aaggctttgtttgggagtttggaggggaggggagggg 38592887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 384 - 416
Target Start/End: Original strand, 43007344 - 43007376
Alignment:
Q  384 taaggctttgtttgcgagtttggaggggaaggg 416  Q
    |||||||||||||| ||||||||||||||||||    
T  43007344 taaggctttgtttgagagtttggaggggaaggg 43007376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 382 - 422
Target Start/End: Complemental strand, 45555907 - 45555867
Alignment:
Q  382 actaaggctttgtttgcgagtttggaggggaagggagggga 422  Q
    |||||||||||||||| ||||||||||||||| ||| ||||    
T  45555907 actaaggctttgtttgggagtttggaggggaatggaaggga 45555867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 386 - 438
Target Start/End: Original strand, 50948077 - 50948129
Alignment:
Q  386 aggctttgtttgcgagtttggaggggaagggaggggaaggcttaggaaaaaag 438  Q
    |||||||||||||| ||||||| |  || ||||||||||| ||||||||||||    
T  50948077 aggctttgtttgcgtgtttggaagaaaaaggaggggaaggtttaggaaaaaag 50948129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 386 - 422
Target Start/End: Original strand, 54126155 - 54126191
Alignment:
Q  386 aggctttgtttgcgagtttggaggggaagggagggga 422  Q
    |||| ||||||| ||||||||||||||||||||||||    
T  54126155 aggcattgtttgtgagtttggaggggaagggagggga 54126191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 53; Significance: 3e-21; HSPs: 54)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 386 - 438
Target Start/End: Original strand, 11514916 - 11514968
Alignment:
Q  386 aggctttgtttgcgagtttggaggggaagggaggggaaggcttaggaaaaaag 438  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11514916 aggctttgtttgcgagtttggaggggaagggaggggaaggcttaggaaaaaag 11514968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 386 - 438
Target Start/End: Complemental strand, 43572757 - 43572705
Alignment:
Q  386 aggctttgtttgcgagtttggaggggaagggaggggaaggcttaggaaaaaag 438  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  43572757 aggctttgtttgcgagtttggaggggaagggaggggaaggcttgggaaaaaag 43572705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 386 - 438
Target Start/End: Original strand, 6655990 - 6656042
Alignment:
Q  386 aggctttgtttgcgagtttggaggggaagggaggggaaggcttaggaaaaaag 438  Q
    ||||||||| |||||||||||||||||||||||||||||||| ||||||||||    
T  6655990 aggctttgtctgcgagtttggaggggaagggaggggaaggctaaggaaaaaag 6656042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 382 - 438
Target Start/End: Original strand, 39750026 - 39750082
Alignment:
Q  382 actaaggctttgtttgcgagtttggaggggaagggaggggaaggcttaggaaaaaag 438  Q
    ||||||||||| |||||||||||||||||||||| |||||||||||| |||||||||    
T  39750026 actaaggctttctttgcgagtttggaggggaaggaaggggaaggcttgggaaaaaag 39750082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 384 - 438
Target Start/End: Complemental strand, 13018689 - 13018635
Alignment:
Q  384 taaggctttgtttgcgagtttggaggggaagggaggggaaggcttaggaaaaaag 438  Q
    |||||||||||||||||||||||| ||||||||||||||||||||  ||||||||    
T  13018689 taaggctttgtttgcgagtttggaagggaagggaggggaaggcttgagaaaaaag 13018635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 381 - 438
Target Start/End: Complemental strand, 16519302 - 16519245
Alignment:
Q  381 cactaaggctttgtttgcgagtttggaggggaagggaggggaaggcttaggaaaaaag 438  Q
    |||||||||||||||||||||||||||||||||| ||||||| || || |||||||||    
T  16519302 cactaaggctttgtttgcgagtttggaggggaagagaggggagggttttggaaaaaag 16519245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 390 - 438
Target Start/End: Complemental strand, 15555550 - 15555502
Alignment:
Q  390 tttgtttgcgagtttggaggggaagggaggggaaggcttaggaaaaaag 438  Q
    ||||||||||||||||||||| ||||||||||||| |||||||||||||    
T  15555550 tttgtttgcgagtttggagggaaagggaggggaagacttaggaaaaaag 15555502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 386 - 437
Target Start/End: Original strand, 16813508 - 16813559
Alignment:
Q  386 aggctttgtttgcgagtttggaggggaagggaggggaaggcttaggaaaaaa 437  Q
    |||||||||||||||||||||||||||||||||| |||||  ||||||||||    
T  16813508 aggctttgtttgcgagtttggaggggaagggaggagaaggtctaggaaaaaa 16813559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 386 - 437
Target Start/End: Original strand, 16852787 - 16852838
Alignment:
Q  386 aggctttgtttgcgagtttggaggggaagggaggggaaggcttaggaaaaaa 437  Q
    |||||||||||||||||||||||||||||||||| |||||  ||||||||||    
T  16852787 aggctttgtttgcgagtttggaggggaagggaggagaaggtctaggaaaaaa 16852838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 388 - 438
Target Start/End: Complemental strand, 16625988 - 16625938
Alignment:
Q  388 gctttgtttgcgagtttggaggggaagggaggggaaggcttaggaaaaaag 438  Q
    ||||||||||||||||||||||||||||||||||| || || |||||||||    
T  16625988 gctttgtttgcgagtttggaggggaagggaggggagggttttggaaaaaag 16625938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 380 - 438
Target Start/End: Original strand, 18780248 - 18780306
Alignment:
Q  380 ccactaaggctttgtttgcgagtttggaggggaagggaggggaaggcttaggaaaaaag 438  Q
    |||||||||||||||||| |||||||||||||| ||||||||| || || |||||||||    
T  18780248 ccactaaggctttgtttgggagtttggaggggaggggaggggagggttttggaaaaaag 18780306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 383 - 437
Target Start/End: Complemental strand, 32761486 - 32761432
Alignment:
Q  383 ctaaggctttgtttgcgagtttggaggggaagggaggggaaggcttaggaaaaaa 437  Q
    ||||||||||| |||||||||||||||||||||||||||| ||||| | ||||||    
T  32761486 ctaaggctttgattgcgagtttggaggggaagggaggggagggctttgtaaaaaa 32761432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 386 - 438
Target Start/End: Original strand, 4003300 - 4003352
Alignment:
Q  386 aggctttgtttgcgagtttggaggggaagggaggggaaggcttaggaaaaaag 438  Q
    |||||||||||| |||||||||| ||||||||||||| ||||| |||||||||    
T  4003300 aggctttgtttgtgagtttggagtggaagggaggggagggctttggaaaaaag 4003352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 381 - 428
Target Start/End: Complemental strand, 1726164 - 1726117
Alignment:
Q  381 cactaaggctttgtttgcgagtttggaggggaagggaggggaaggctt 428  Q
    ||||||||||||||||| ||||||||||| |||||||||||| |||||    
T  1726164 cactaaggctttgtttgagagtttggaggagaagggaggggagggctt 1726117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 390 - 437
Target Start/End: Original strand, 37194142 - 37194189
Alignment:
Q  390 tttgtttgcgagtttggaggggaagggaggggaaggcttaggaaaaaa 437  Q
    ||||||||||||||||||||||||||||||||||| |||  |||||||    
T  37194142 tttgtttgcgagtttggaggggaagggaggggaagacttgagaaaaaa 37194189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 422
Target Start/End: Original strand, 14008145 - 14008183
Alignment:
Q  384 taaggctttgtttgcgagtttggaggggaagggagggga 422  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  14008145 taaggctttgtttgggagtttggaggggaagggagggga 14008183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 392 - 438
Target Start/End: Original strand, 34757483 - 34757529
Alignment:
Q  392 tgtttgcgagtttggaggggaagggaggggaaggcttaggaaaaaag 438  Q
    ||||||||| |||||||||||||||||||||||| || |||||||||    
T  34757483 tgtttgcgaatttggaggggaagggaggggaaggtttgggaaaaaag 34757529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 383 - 424
Target Start/End: Original strand, 21625993 - 21626034
Alignment:
Q  383 ctaaggctttgtttgcgagtttggaggggaagggaggggaag 424  Q
    |||||||||||||||||| |||||||||||| ||||||||||    
T  21625993 ctaaggctttgtttgcgaatttggaggggaatggaggggaag 21626034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 383 - 415
Target Start/End: Original strand, 1364712 - 1364744
Alignment:
Q  383 ctaaggctttgtttgcgagtttggaggggaagg 415  Q
    |||||||||||||||||||||||||||||||||    
T  1364712 ctaaggctttgtttgcgagtttggaggggaagg 1364744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 383 - 415
Target Start/End: Complemental strand, 5322320 - 5322288
Alignment:
Q  383 ctaaggctttgtttgcgagtttggaggggaagg 415  Q
    |||||||||||||||||||||||||||||||||    
T  5322320 ctaaggctttgtttgcgagtttggaggggaagg 5322288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 383 - 415
Target Start/End: Complemental strand, 11515310 - 11515278
Alignment:
Q  383 ctaaggctttgtttgcgagtttggaggggaagg 415  Q
    |||||||||||||||||||||||||||||||||    
T  11515310 ctaaggctttgtttgcgagtttggaggggaagg 11515278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 380 - 428
Target Start/End: Complemental strand, 18781688 - 18781640
Alignment:
Q  380 ccactaaggctttgtttgcgagtttggaggggaagggaggggaaggctt 428  Q
    ||||| ||| |||||||| |||||||||||||||||||||||| |||||    
T  18781688 ccacttaggttttgtttgagagtttggaggggaagggaggggagggctt 18781640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 381 - 417
Target Start/End: Original strand, 36870130 - 36870166
Alignment:
Q  381 cactaaggctttgtttgcgagtttggaggggaaggga 417  Q
    ||||||||||||||||||||||||| |||||||||||    
T  36870130 cactaaggctttgtttgcgagtttgaaggggaaggga 36870166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 386 - 422
Target Start/End: Complemental strand, 37201824 - 37201788
Alignment:
Q  386 aggctttgtttgcgagtttggaggggaagggagggga 422  Q
    ||||||||||||||| |||||||||||||||||||||    
T  37201824 aggctttgtttgcgaatttggaggggaagggagggga 37201788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 383 - 415
Target Start/End: Original strand, 39204821 - 39204853
Alignment:
Q  383 ctaaggctttgtttgcgagtttggaggggaagg 415  Q
    |||||||||||||||||||||||||||||||||    
T  39204821 ctaaggctttgtttgcgagtttggaggggaagg 39204853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 382 - 425
Target Start/End: Complemental strand, 11950267 - 11950224
Alignment:
Q  382 actaaggctttgtttgcgagtttggaggggaagggaggggaagg 425  Q
    ||||||||||||||||  ||||||||||||| ||||||||||||    
T  11950267 actaaggctttgtttggaagtttggaggggaggggaggggaagg 11950224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 386 - 437
Target Start/End: Complemental strand, 14008537 - 14008486
Alignment:
Q  386 aggctttgtttgcgagtttggaggggaagggaggggaaggcttaggaaaaaa 437  Q
    ||||||| |||| |||||||||||||||||||||||| || || ||||||||    
T  14008537 aggctttctttgggagtttggaggggaagggaggggagggttttggaaaaaa 14008486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 380 - 427
Target Start/End: Original strand, 16625626 - 16625673
Alignment:
Q  380 ccactaaggctttgtttgcgagtttggaggggaagggaggggaaggct 427  Q
    |||||||||||||||||| |||||||||||||| |||| |||| ||||    
T  16625626 ccactaaggctttgtttgggagtttggaggggaggggaagggagggct 16625673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 438
Target Start/End: Original strand, 31082688 - 31082740
Alignment:
Q  384 taaggctttgtttgcgagtttggaggggaagggaggggaaggcttaggaaaaaag 438  Q
    ||||||||||||||||||||||||  | |||||||||||| |||| |||||||||    
T  31082688 taaggctttgtttgcgagtttgga--gaaagggaggggaacgcttgggaaaaaag 31082740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 381 - 428
Target Start/End: Original strand, 36567091 - 36567138
Alignment:
Q  381 cactaaggctttgtttgcgagtttggaggggaagggaggggaaggctt 428  Q
    |||| ||||||||| || |||||||||||||||||||||||| |||||    
T  36567091 cacttaggctttgtctgtgagtttggaggggaagggaggggagggctt 36567138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 381 - 420
Target Start/End: Original strand, 44137024 - 44137063
Alignment:
Q  381 cactaaggctttgtttgcgagtttggaggggaagggaggg 420  Q
    ||||||||||||||||| |||||||||||||| |||||||    
T  44137024 cactaaggctttgtttgggagtttggaggggaggggaggg 44137063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 386 - 428
Target Start/End: Complemental strand, 1365086 - 1365044
Alignment:
Q  386 aggctttgtttgcgagtttggaggggaagggaggggaaggctt 428  Q
    |||||||||||||||||||||||||||||| | || |||||||    
T  1365086 aggctttgtttgcgagtttggaggggaaggaaaggaaaggctt 1365044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 383 - 437
Target Start/End: Complemental strand, 8991173 - 8991119
Alignment:
Q  383 ctaaggctttgtttgcgagtttggaggggaagggaggggaaggcttaggaaaaaa 437  Q
    |||| |||||||||| |||||||||||||| ||||||||| || || ||||||||    
T  8991173 ctaatgctttgtttgggagtttggaggggaggggaggggagggttttggaaaaaa 8991119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 388 - 422
Target Start/End: Complemental strand, 11522373 - 11522339
Alignment:
Q  388 gctttgtttgcgagtttggaggggaagggagggga 422  Q
    |||||||||||||||||||||||||| ||||||||    
T  11522373 gctttgtttgcgagtttggaggggaatggagggga 11522339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 386 - 420
Target Start/End: Original strand, 18826049 - 18826083
Alignment:
Q  386 aggctttgtttgcgagtttggaggggaagggaggg 420  Q
    |||||||||||| ||||||||||||||||||||||    
T  18826049 aggctttgtttgggagtttggaggggaagggaggg 18826083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 382 - 432
Target Start/End: Complemental strand, 31369087 - 31369037
Alignment:
Q  382 actaaggctttgtttgcgagtttggaggggaagggaggggaaggcttagga 432  Q
    ||||||||||||||||||||||| |||||||||| | || |||||| ||||    
T  31369087 actaaggctttgtttgcgagttttgaggggaaggaaaggaaaggctaagga 31369037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 386 - 428
Target Start/End: Complemental strand, 44137340 - 44137298
Alignment:
Q  386 aggctttgtttgcgagtttggaggggaagggaggggaaggctt 428  Q
    |||||||||||| ||||||||||||||||||| |||| |||||    
T  44137340 aggctttgtttgggagtttggaggggaagggaagggagggctt 44137298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 420
Target Start/End: Complemental strand, 26599440 - 26599403
Alignment:
Q  383 ctaaggctttgtttgcgagtttggaggggaagggaggg 420  Q
    |||| |||||||||| ||||||||||||||||||||||    
T  26599440 ctaatgctttgtttgtgagtttggaggggaagggaggg 26599403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 386 - 415
Target Start/End: Complemental strand, 34757859 - 34757830
Alignment:
Q  386 aggctttgtttgcgagtttggaggggaagg 415  Q
    ||||||||||||||||||||||||||||||    
T  34757859 aggctttgtttgcgagtttggaggggaagg 34757830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 384 - 437
Target Start/End: Complemental strand, 35550366 - 35550313
Alignment:
Q  384 taaggctttgtttgcgagtttggaggggaagggaggggaaggcttaggaaaaaa 437  Q
    |||| ||||||||||||||||||||||||||| | |||||| |||  |||||||    
T  35550366 taagactttgtttgcgagtttggaggggaaggaatgggaagtcttgagaaaaaa 35550313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 420
Target Start/End: Original strand, 38293758 - 38293795
Alignment:
Q  383 ctaaggctttgtttgcgagtttggaggggaagggaggg 420  Q
    ||||||||||||||| |||||||||||||| |||||||    
T  38293758 ctaaggctttgtttgggagtttggaggggaggggaggg 38293795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 389 - 422
Target Start/End: Original strand, 39180955 - 39180988
Alignment:
Q  389 ctttgtttgcgagtttggaggggaagggagggga 422  Q
    |||||||||||||||||||| |||||||||||||    
T  39180955 ctttgtttgcgagtttggagaggaagggagggga 39180988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 428
Target Start/End: Original strand, 41655222 - 41655267
Alignment:
Q  383 ctaaggctttgtttgcgagtttggaggggaagggaggggaaggctt 428  Q
    ||||||||||||||| |||||||||||||| |||  ||||||||||    
T  41655222 ctaaggctttgtttgggagtttggaggggagggggtgggaaggctt 41655267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 384 - 432
Target Start/End: Complemental strand, 2981502 - 2981454
Alignment:
Q  384 taaggctttgtttgcgagtttggaggggaagggaggggaaggcttagga 432  Q
    ||||||||||||||||||||| |||||||||| | || |||||| ||||    
T  2981502 taaggctttgtttgcgagttttgaggggaaggaaaggaaaggctaagga 2981454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 384 - 428
Target Start/End: Complemental strand, 7367843 - 7367799
Alignment:
Q  384 taaggctttgtttgcgagtttggaggggaagggaggggaaggctt 428  Q
    |||||||||||||| ||||||||||||||  ||| ||||||||||    
T  7367843 taaggctttgtttgagagtttggaggggagtggaagggaaggctt 7367799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 384 - 432
Target Start/End: Complemental strand, 11914202 - 11914154
Alignment:
Q  384 taaggctttgtttgcgagtttggaggggaagggaggggaaggcttagga 432  Q
    |||| |||||||||||||||| ||||||| |||| || |||||||||||    
T  11914202 taagactttgtttgcgagttttgaggggaggggaaggaaaggcttagga 11914154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 384 - 428
Target Start/End: Complemental strand, 15803437 - 15803393
Alignment:
Q  384 taaggctttgtttgcgagtttggaggggaagggaggggaaggctt 428  Q
    |||||||||||||| |||||||||||||| |||| || |||||||    
T  15803437 taaggctttgtttgggagtttggaggggaggggaaggaaaggctt 15803393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 386 - 422
Target Start/End: Original strand, 30312244 - 30312280
Alignment:
Q  386 aggctttgtttgcgagtttggaggggaagggagggga 422  Q
    |||||||||||| |||||||||||||||| |||||||    
T  30312244 aggctttgtttgagagtttggaggggaagagagggga 30312280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 384 - 420
Target Start/End: Complemental strand, 30312611 - 30312575
Alignment:
Q  384 taaggctttgtttgcgagtttggaggggaagggaggg 420  Q
    |||||||||||||| |||||||||||||| |||||||    
T  30312611 taaggctttgtttgggagtttggaggggaggggaggg 30312575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 386 - 438
Target Start/End: Complemental strand, 31550458 - 31550406
Alignment:
Q  386 aggctttgtttgcgagtttggaggggaagggaggggaaggcttaggaaaaaag 438  Q
    |||||||||||| |||||||||| ||| ||||||||| || || |||||||||    
T  31550458 aggctttgtttgggagtttggagtggaggggaggggagggttttggaaaaaag 31550406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 383 - 423
Target Start/End: Original strand, 31899171 - 31899211
Alignment:
Q  383 ctaaggctttgtttgcgagtttggaggggaagggaggggaa 423  Q
    |||| |||||||||| |||||||||||||||||||| ||||    
T  31899171 ctaaagctttgtttgggagtttggaggggaagggagaggaa 31899211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 390 - 422
Target Start/End: Complemental strand, 38294147 - 38294115
Alignment:
Q  390 tttgtttgcgagtttggaggggaagggagggga 422  Q
    |||||||| ||||||||||||||||||||||||    
T  38294147 tttgtttgggagtttggaggggaagggagggga 38294115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 386 - 438
Target Start/End: Original strand, 40211876 - 40211928
Alignment:
Q  386 aggctttgtttgcgagtttggaggggaagggaggggaaggcttaggaaaaaag 438  Q
    |||||||||||| ||||||||||| ||||||| ||||||| ||  ||||||||    
T  40211876 aggctttgtttgtgagtttggaggagaagggatgggaaggtttgagaaaaaag 40211928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 386 - 422
Target Start/End: Complemental strand, 40357720 - 40357684
Alignment:
Q  386 aggctttgtttgcgagtttggaggggaagggagggga 422  Q
    ||||||||||||  |||||||||||||||||||||||    
T  40357720 aggctttgtttggaagtttggaggggaagggagggga 40357684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 52; Significance: 1e-20; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 383 - 438
Target Start/End: Complemental strand, 15749161 - 15749106
Alignment:
Q  383 ctaaggctttgtttgcgagtttggaggggaagggaggggaaggcttaggaaaaaag 438  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  15749161 ctaaggttttgtttgcgagtttggaggggaagggaggggaaggcttaggaaaaaag 15749106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 386 - 438
Target Start/End: Complemental strand, 38505543 - 38505491
Alignment:
Q  386 aggctttgtttgcgagtttggaggggaagggaggggaaggcttaggaaaaaag 438  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  38505543 aggctttgtttgcgagtttggaggggaagggaggggaaggcttgggaaaaaag 38505491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 383 - 438
Target Start/End: Complemental strand, 16805779 - 16805724
Alignment:
Q  383 ctaaggctttgtttgcgagtttggaggggaagggaggggaaggcttaggaaaaaag 438  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| |||||||||    
T  16805779 ctaaggctttgtttgcgagtttggaggggaagggaggggaagacttgggaaaaaag 16805724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 383 - 437
Target Start/End: Complemental strand, 4058351 - 4058297
Alignment:
Q  383 ctaaggctttgtttgcgagtttggaggggaagggaggggaaggcttaggaaaaaa 437  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| ||||||||    
T  4058351 ctaaggctttgtttgcgagtttggaggggaagggaggggaagacttgggaaaaaa 4058297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 380 - 428
Target Start/End: Complemental strand, 33872269 - 33872221
Alignment:
Q  380 ccactaaggctttgtttgcgagtttggaggggaagggaggggaaggctt 428  Q
    ||||||||||||||||||||||||||||||||| ||||||||| |||||    
T  33872269 ccactaaggctttgtttgcgagtttggaggggaggggaggggagggctt 33872221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 383 - 438
Target Start/End: Original strand, 42253829 - 42253884
Alignment:
Q  383 ctaaggctttgtttgcgagtttggaggggaagggaggggaaggcttaggaaaaaag 438  Q
    |||||||||||||||||| |||||||||||||||| || ||||||| |||||||||    
T  42253829 ctaaggctttgtttgcgaatttggaggggaagggaaggaaaggcttgggaaaaaag 42253884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 384 - 427
Target Start/End: Original strand, 46442579 - 46442622
Alignment:
Q  384 taaggctttgtttgcgagtttggaggggaagggaggggaaggct 427  Q
    |||||||||| |||||||||||||||||||||||||||||||||    
T  46442579 taaggctttggttgcgagtttggaggggaagggaggggaaggct 46442622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 384 - 428
Target Start/End: Original strand, 7666980 - 7667024
Alignment:
Q  384 taaggctttgtttgcgagtttggaggggaagggaggggaaggctt 428  Q
    |||||||||||||| |||||||||||||||||||||||| |||||    
T  7666980 taaggctttgtttgggagtttggaggggaagggaggggagggctt 7667024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 384 - 432
Target Start/End: Complemental strand, 19679461 - 19679413
Alignment:
Q  384 taaggctttgtttgcgagtttggaggggaagggaggggaaggcttagga 432  Q
    |||||||||||||| ||||| |||||||||||||||||| |||||||||    
T  19679461 taaggctttgtttgtgagttaggaggggaagggaggggagggcttagga 19679413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 383 - 438
Target Start/End: Complemental strand, 2826458 - 2826403
Alignment:
Q  383 ctaaggctttgtttgcgagtttggaggggaagggaggggaaggcttaggaaaaaag 438  Q
    ||||| ||||||||||||||||||||| ||| |||||||||||||| || ||||||    
T  2826458 ctaagactttgtttgcgagtttggaggagaatggaggggaaggcttggggaaaaag 2826403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 386 - 428
Target Start/End: Original strand, 28437359 - 28437401
Alignment:
Q  386 aggctttgtttgcgagtttggaggggaagggaggggaaggctt 428  Q
    |||||||||||| |||||||||||||||||||||||| |||||    
T  28437359 aggctttgtttgagagtttggaggggaagggaggggagggctt 28437401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 386 - 424
Target Start/End: Original strand, 30081238 - 30081276
Alignment:
Q  386 aggctttgtttgcgagtttggaggggaagggaggggaag 424  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  30081238 aggctttgtttgtgagtttggaggggaagggaggggaag 30081276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 386 - 428
Target Start/End: Original strand, 33871778 - 33871820
Alignment:
Q  386 aggctttgtttgcgagtttggaggggaagggaggggaaggctt 428  Q
    ||||||||||||||||||||||||||| |||| ||||||||||    
T  33871778 aggctttgtttgcgagtttggaggggaggggaagggaaggctt 33871820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 386 - 428
Target Start/End: Original strand, 34651871 - 34651913
Alignment:
Q  386 aggctttgtttgcgagtttggaggggaagggaggggaaggctt 428  Q
    |||||||||||| |||||||||||||||||||||||| |||||    
T  34651871 aggctttgtttgggagtttggaggggaagggaggggatggctt 34651913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 422
Target Start/End: Complemental strand, 38236057 - 38236019
Alignment:
Q  384 taaggctttgtttgcgagtttggaggggaagggagggga 422  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  38236057 taaggctttgtttgggagtttggaggggaagggagggga 38236019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 422
Target Start/End: Original strand, 41471375 - 41471413
Alignment:
Q  384 taaggctttgtttgcgagtttggaggggaagggagggga 422  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  41471375 taaggctttgtttgcgagtttggaggagaagggagggga 41471413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 386 - 436
Target Start/End: Original strand, 42854120 - 42854170
Alignment:
Q  386 aggctttgtttgcgagtttggaggggaagggaggggaaggcttaggaaaaa 436  Q
    |||||||||||| || ||||||||||||||||||||| ||||| |||||||    
T  42854120 aggctttgtttgtgaatttggaggggaagggaggggagggctttggaaaaa 42854170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 381 - 422
Target Start/End: Complemental strand, 33406846 - 33406805
Alignment:
Q  381 cactaaggctttgtttgcgagtttggaggggaagggagggga 422  Q
    ||||||||||||||||| |||||||||||||| |||||||||    
T  33406846 cactaaggctttgtttgggagtttggaggggaggggagggga 33406805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 383 - 428
Target Start/End: Original strand, 38505159 - 38505204
Alignment:
Q  383 ctaaggctttgtttgcgagtttggaggggaagggaggggaaggctt 428  Q
    ||||||||||||||| |||||||||||||| |||| ||||||||||    
T  38505159 ctaaggctttgtttgggagtttggaggggaggggaagggaaggctt 38505204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 383 - 420
Target Start/End: Complemental strand, 42382961 - 42382924
Alignment:
Q  383 ctaaggctttgtttgcgagtttggaggggaagggaggg 420  Q
    |||||||| |||||||||||||||||||||||||||||    
T  42382961 ctaaggctctgtttgcgagtttggaggggaagggaggg 42382924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 390 - 422
Target Start/End: Original strand, 19791563 - 19791595
Alignment:
Q  390 tttgtttgcgagtttggaggggaagggagggga 422  Q
    |||||||||||||||||||||||||||||||||    
T  19791563 tttgtttgcgagtttggaggggaagggagggga 19791595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 382 - 437
Target Start/End: Complemental strand, 7391620 - 7391566
Alignment:
Q  382 actaaggctttgtttgcgagtttggaggggaagggaggggaaggcttaggaaaaaa 437  Q
    |||||||||||| ||||||||||||||||||| ||| ||||||| || ||||||||    
T  7391620 actaaggctttgcttgcgagtttggaggggaatgga-gggaagggtttggaaaaaa 7391566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 386 - 437
Target Start/End: Complemental strand, 7667374 - 7667323
Alignment:
Q  386 aggctttgtttgcgagtttggaggggaagggaggggaaggcttaggaaaaaa 437  Q
    |||||||||||| |||||||||||||| ||||||||| || || ||||||||    
T  7667374 aggctttgtttgggagtttggaggggaggggaggggagggttttggaaaaaa 7667323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 386 - 437
Target Start/End: Complemental strand, 10592159 - 10592108
Alignment:
Q  386 aggctttgtttgcgagtttggaggggaagggaggggaaggcttaggaaaaaa 437  Q
    ||||||||||| |||||||||| |||||| || |||||||||| ||||||||    
T  10592159 aggctttgtttacgagtttggaagggaagagatgggaaggcttgggaaaaaa 10592108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 386 - 437
Target Start/End: Original strand, 36747168 - 36747219
Alignment:
Q  386 aggctttgtttgcgagtttggaggggaagggaggggaaggcttaggaaaaaa 437  Q
    |||||||||||| |||||||||||||| ||||||||| || || ||||||||    
T  36747168 aggctttgtttgagagtttggaggggaggggaggggagggttttggaaaaaa 36747219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 422
Target Start/End: Original strand, 425272 - 425310
Alignment:
Q  384 taaggctttgtttgcgagtttggaggggaagggagggga 422  Q
    ||||||||||| ||||||||||||||||| |||||||||    
T  425272 taaggctttgtatgcgagtttggaggggaggggagggga 425310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 383 - 417
Target Start/End: Original strand, 30183717 - 30183751
Alignment:
Q  383 ctaaggctttgtttgcgagtttggaggggaaggga 417  Q
    |||||||||||||||||||||| ||||||||||||    
T  30183717 ctaaggctttgtttgcgagtttagaggggaaggga 30183751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 383 - 437
Target Start/End: Complemental strand, 32650592 - 32650538
Alignment:
Q  383 ctaaggctttgtttgcgagtttggaggggaagggaggggaaggcttaggaaaaaa 437  Q
    ||||| |||||||||||||||||||||||||| |||| ||| | || ||||||||    
T  32650592 ctaagactttgtttgcgagtttggaggggaagagaggagaaagtttgggaaaaaa 32650538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 422
Target Start/End: Complemental strand, 42267220 - 42267182
Alignment:
Q  384 taaggctttgtttgcgagtttggaggggaagggagggga 422  Q
    ||||||||||||||| |||||||||||||| ||||||||    
T  42267220 taaggctttgtttgcaagtttggaggggaatggagggga 42267182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 380 - 417
Target Start/End: Complemental strand, 36747569 - 36747532
Alignment:
Q  380 ccactaaggctttgtttgcgagtttggaggggaaggga 417  Q
    |||||||| ||||||||| |||||||||||||||||||    
T  36747569 ccactaagtctttgtttgagagtttggaggggaaggga 36747532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 432
Target Start/End: Complemental strand, 37572123 - 37572074
Alignment:
Q  383 ctaaggctttgtttgcgagtttggaggggaagggaggggaaggcttagga 432  Q
    |||||||||||||||||||||| |||||||||| | || |||||| ||||    
T  37572123 ctaaggctttgtttgcgagttttgaggggaaggaaaggaaaggctaagga 37572074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 386 - 415
Target Start/End: Original strand, 38137822 - 38137851
Alignment:
Q  386 aggctttgtttgcgagtttggaggggaagg 415  Q
    ||||||||||||||||||||||||||||||    
T  38137822 aggctttgtttgcgagtttggaggggaagg 38137851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 438
Target Start/End: Original strand, 43741586 - 43741631
Alignment:
Q  393 gtttgcgagtttggaggggaagggaggggaaggcttaggaaaaaag 438  Q
    |||||| ||||||||||||||| |||||||||||||  ||||||||    
T  43741586 gtttgcaagtttggaggggaagtgaggggaaggcttgagaaaaaag 43741631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 384 - 428
Target Start/End: Original strand, 3658327 - 3658371
Alignment:
Q  384 taaggctttgtttgcgagtttggaggggaagggaggggaaggctt 428  Q
    |||||||||||||| ||||||||||||||||| ||| || |||||    
T  3658327 taaggctttgtttgggagtttggaggggaaggaaggagagggctt 3658371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 386 - 422
Target Start/End: Complemental strand, 3658720 - 3658684
Alignment:
Q  386 aggctttgtttgcgagtttggaggggaagggagggga 422  Q
    |||||||||||| |||||||||||||| |||||||||    
T  3658720 aggctttgtttgggagtttggaggggaggggagggga 3658684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 386 - 438
Target Start/End: Complemental strand, 6746775 - 6746723
Alignment:
Q  386 aggctttgtttgcgagtttggaggggaagggaggggaaggcttaggaaaaaag 438  Q
    |||||||||||| |||||| ||||||||| ||||||| || || |||||||||    
T  6746775 aggctttgtttgtgagtttagaggggaagtgaggggagggatttggaaaaaag 6746723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 382 - 422
Target Start/End: Complemental strand, 17768231 - 17768191
Alignment:
Q  382 actaaggctttgtttgcgagtttggaggggaagggagggga 422  Q
    ||||| ||| |||||| ||||||||||||||||||||||||    
T  17768231 actaatgctgtgtttgggagtttggaggggaagggagggga 17768191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 384 - 424
Target Start/End: Original strand, 23465816 - 23465856
Alignment:
Q  384 taaggctttgtttgcgagtttggaggggaagggaggggaag 424  Q
    |||||||||||||| |||||||||||||| |||| ||||||    
T  23465816 taaggctttgtttgggagtttggaggggaggggaagggaag 23465856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 386 - 438
Target Start/End: Original strand, 30080844 - 30080896
Alignment:
Q  386 aggctttgtttgcgagtttggaggggaagggaggggaaggcttaggaaaaaag 438  Q
    ||||||| |||||||||||| ||| |||||||||||||| |||  ||||||||    
T  30080844 aggctttatttgcgagtttgtaggagaagggaggggaagacttgagaaaaaag 30080896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 384 - 420
Target Start/End: Complemental strand, 33113847 - 33113811
Alignment:
Q  384 taaggctttgtttgcgagtttggaggggaagggaggg 420  Q
    |||||||||||||| |||||||||||||| |||||||    
T  33113847 taaggctttgtttgggagtttggaggggaggggaggg 33113811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 383 - 415
Target Start/End: Original strand, 34379245 - 34379277
Alignment:
Q  383 ctaaggctttgtttgcgagtttggaggggaagg 415  Q
    |||||||||||||||||||||| ||||||||||    
T  34379245 ctaaggctttgtttgcgagttttgaggggaagg 34379277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 384 - 428
Target Start/End: Complemental strand, 43189122 - 43189078
Alignment:
Q  384 taaggctttgtttgcgagtttggaggggaagggaggggaaggctt 428  Q
    |||||||||||||| ||||||||| |||||||||| ||| |||||    
T  43189122 taaggctttgtttgggagtttggatgggaagggagaggagggctt 43189078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 381 - 413
Target Start/End: Complemental strand, 46612014 - 46611982
Alignment:
Q  381 cactaaggctttgtttgcgagtttggaggggaa 413  Q
    |||| ||||||||||||||||||||||||||||    
T  46612014 cacttaggctttgtttgcgagtttggaggggaa 46611982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 52; Significance: 1e-20; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 383 - 438
Target Start/End: Original strand, 1567150 - 1567205
Alignment:
Q  383 ctaaggctttgtttgcgagtttggaggggaagggaggggaaggcttaggaaaaaag 438  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  1567150 ctaaggttttgtttgcgagtttggaggggaagggaggggaaggcttaggaaaaaag 1567205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 388 - 438
Target Start/End: Complemental strand, 32719582 - 32719532
Alignment:
Q  388 gctttgtttgcgagtttggaggggaagggaggggaaggcttaggaaaaaag 438  Q
    ||||||||||||||||||||||||||||||||||||||||  |||||||||    
T  32719582 gctttgtttgcgagtttggaggggaagggaggggaaggctagggaaaaaag 32719532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 384 - 422
Target Start/End: Original strand, 26713733 - 26713771
Alignment:
Q  384 taaggctttgtttgcgagtttggaggggaagggagggga 422  Q
    |||||||||||||||||||||||||||||||||||||||    
T  26713733 taaggctttgtttgcgagtttggaggggaagggagggga 26713771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 386 - 428
Target Start/End: Original strand, 29241651 - 29241693
Alignment:
Q  386 aggctttgtttgcgagtttggaggggaagggaggggaaggctt 428  Q
    |||||||||||| |||||||||||||||||||||||| |||||    
T  29241651 aggctttgtttgggagtttggaggggaagggaggggagggctt 29241693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 384 - 428
Target Start/End: Original strand, 4909696 - 4909740
Alignment:
Q  384 taaggctttgtttgcgagtttggaggggaagggaggggaaggctt 428  Q
    |||||||||||||| ||||||||||||||||||||| || |||||    
T  4909696 taaggctttgtttgggagtttggaggggaagggaggcgagggctt 4909740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 384 - 420
Target Start/End: Complemental strand, 5825597 - 5825561
Alignment:
Q  384 taaggctttgtttgcgagtttggaggggaagggaggg 420  Q
    |||||||||||||| ||||||||||||||||||||||    
T  5825597 taaggctttgtttgggagtttggaggggaagggaggg 5825561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 390 - 438
Target Start/End: Original strand, 6855511 - 6855559
Alignment:
Q  390 tttgtttgcgagtttggaggggaagggaggggaaggcttaggaaaaaag 438  Q
    |||||||| ||||||||| |||||||||||||||||||| | |||||||    
T  6855511 tttgtttgtgagtttggaagggaagggaggggaaggcttggaaaaaaag 6855559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 386 - 425
Target Start/End: Complemental strand, 33590536 - 33590497
Alignment:
Q  386 aggctttgtttgcgagtttggaggggaagggaggggaagg 425  Q
    |||||||||||||||||||||||||||| |||| ||||||    
T  33590536 aggctttgtttgcgagtttggaggggaatggagtggaagg 33590497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 438
Target Start/End: Original strand, 12779387 - 12779440
Alignment:
Q  384 taaggctttgtttgcgagtttggaggggaagggaggggaaggcttaggaaaaaag 438  Q
    |||||||||||||||||| ||||||| ||||||||||||||| || | |||||||    
T  12779387 taaggctttgtttgcgag-ttggaggtgaagggaggggaaggtttggaaaaaaag 12779440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 382 - 424
Target Start/End: Complemental strand, 14201866 - 14201824
Alignment:
Q  382 actaaggctttgtttgcgagtttggaggggaagggaggggaag 424  Q
    |||||||||||||||| |||||||| |||||||||| ||||||    
T  14201866 actaaggctttgtttgtgagtttggtggggaagggaagggaag 14201824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 386 - 420
Target Start/End: Original strand, 24734759 - 24734793
Alignment:
Q  386 aggctttgtttgcgagtttggaggggaagggaggg 420  Q
    |||||||||||| ||||||||||||||||||||||    
T  24734759 aggctttgtttgggagtttggaggggaagggaggg 24734793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 383 - 417
Target Start/End: Complemental strand, 25073462 - 25073428
Alignment:
Q  383 ctaaggctttgtttgcgagtttggaggggaaggga 417  Q
    |||||||||||||||| ||||||||||||||||||    
T  25073462 ctaaggctttgtttgcaagtttggaggggaaggga 25073428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 432
Target Start/End: Complemental strand, 16803067 - 16803018
Alignment:
Q  383 ctaaggctttgtttgcgagtttggaggggaagggaggggaaggcttagga 432  Q
    |||||||||||||||||||||| |||||||||| | || |||||| ||||    
T  16803067 ctaaggctttgtttgcgagttttgaggggaaggaaaggaaaggctaagga 16803018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 381 - 422
Target Start/End: Complemental strand, 24735150 - 24735109
Alignment:
Q  381 cactaaggctttgtttgcgagtttggaggggaagggagggga 422  Q
    |||||||| |||||||| |||||||||||||| |||||||||    
T  24735150 cactaaggttttgtttgggagtttggaggggaggggagggga 24735109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 389 - 438
Target Start/End: Complemental strand, 24875138 - 24875089
Alignment:
Q  389 ctttgtttgcgagtttggaggggaagggaggggaaggcttaggaaaaaag 438  Q
    ||||||||||||||||| | || |||||||||||| |||| |||||||||    
T  24875138 ctttgtttgcgagtttgaaaggaaagggaggggaatgcttgggaaaaaag 24875089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 386 - 422
Target Start/End: Complemental strand, 2365806 - 2365770
Alignment:
Q  386 aggctttgtttgcgagtttggaggggaagggagggga 422  Q
    |||||||||||| |||||||||||||| |||||||||    
T  2365806 aggctttgtttgggagtttggaggggaggggagggga 2365770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 386 - 422
Target Start/End: Original strand, 23094947 - 23094983
Alignment:
Q  386 aggctttgtttgcgagtttggaggggaagggagggga 422  Q
    |||||||||||| |||||||||| |||||||||||||    
T  23094947 aggctttgtttgggagtttggagtggaagggagggga 23094983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 382 - 422
Target Start/End: Original strand, 31345183 - 31345223
Alignment:
Q  382 actaaggctttgtttgcgagtttggaggggaagggagggga 422  Q
    |||||||||||||||| ||||||||| ||||| ||||||||    
T  31345183 actaaggctttgtttgggagtttggaagggaacggagggga 31345223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 50; Significance: 2e-19; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 380 - 437
Target Start/End: Complemental strand, 79829 - 79772
Alignment:
Q  380 ccactaaggctttgtttgcgagtttggaggggaagggaggggaaggcttaggaaaaaa 437  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  79829 ccaccaaggctttgtttgcgagtttggaggggaagggaggggaaggcttgggaaaaaa 79772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 384 - 438
Target Start/End: Complemental strand, 21174068 - 21174014
Alignment:
Q  384 taaggctttgtttgcgagtttggaggggaagggaggggaaggcttaggaaaaaag 438  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||||||||    
T  21174068 taaggctttgtttgcgagtttggagtggaagggaggggaatgcttaggaaaaaag 21174014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 386 - 438
Target Start/End: Complemental strand, 23932766 - 23932714
Alignment:
Q  386 aggctttgtttgcgagtttggaggggaagggaggggaaggcttaggaaaaaag 438  Q
    |||||||||||||||||||||||||||||||| |||||||||| |||||||||    
T  23932766 aggctttgtttgcgagtttggaggggaagggaagggaaggcttgggaaaaaag 23932714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 386 - 438
Target Start/End: Complemental strand, 26772850 - 26772798
Alignment:
Q  386 aggctttgtttgcgagtttggaggggaagggaggggaaggcttaggaaaaaag 438  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  26772850 aggctttgtttgcgagtttggagggaaagggagaggaaggcttaggaaaaaag 26772798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 386 - 438
Target Start/End: Complemental strand, 14581956 - 14581904
Alignment:
Q  386 aggctttgtttgcgagtttggaggggaagggaggggaaggcttaggaaaaaag 438  Q
    |||||||||||||||||||| ||||||| |||||||||||||| |||||||||    
T  14581956 aggctttgtttgcgagtttgcaggggaaaggaggggaaggcttgggaaaaaag 14581904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 386 - 438
Target Start/End: Complemental strand, 21262784 - 21262732
Alignment:
Q  386 aggctttgtttgcgagtttggaggggaagggaggggaaggcttaggaaaaaag 438  Q
    ||||||||||||||||||||||||||||||||  ||| ||||| |||||||||    
T  21262784 aggctttgtttgcgagtttggaggggaagggaaaggagggctttggaaaaaag 21262732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 384 - 428
Target Start/End: Complemental strand, 36906454 - 36906410
Alignment:
Q  384 taaggctttgtttgcgagtttggaggggaagggaggggaaggctt 428  Q
    |||||||||||||| |||||||||||||||||||||||| |||||    
T  36906454 taaggctttgtttgggagtttggaggggaagggaggggagggctt 36906410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 383 - 438
Target Start/End: Complemental strand, 3404785 - 3404730
Alignment:
Q  383 ctaaggctttgtttgcgagtttggaggggaagggaggggaaggcttaggaaaaaag 438  Q
    ||||||||||||||| |||||||||||||| ||||||||| || || |||||||||    
T  3404785 ctaaggctttgtttgggagtttggaggggaggggaggggagggttttggaaaaaag 3404730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 383 - 422
Target Start/End: Original strand, 34148395 - 34148434
Alignment:
Q  383 ctaaggctttgtttgcgagtttggaggggaagggagggga 422  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  34148395 ctaaggctttgtttgggagtttggaggggaagggagggga 34148434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 386 - 428
Target Start/End: Original strand, 1839638 - 1839680
Alignment:
Q  386 aggctttgtttgcgagtttggaggggaagggaggggaaggctt 428  Q
    |||||||||||||||||||||||||||||||| || |||||||    
T  1839638 aggctttgtttgcgagtttggaggggaagggaaggaaaggctt 1839680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 387 - 428
Target Start/End: Original strand, 79439 - 79480
Alignment:
Q  387 ggctttgtttgcgagtttggaggggaagggaggggaaggctt 428  Q
    |||||||||||||||||||||||||| |||| ||||||||||    
T  79439 ggctttgtttgcgagtttggaggggaggggaagggaaggctt 79480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 383 - 428
Target Start/End: Complemental strand, 1840031 - 1839986
Alignment:
Q  383 ctaaggctttgtttgcgagtttggaggggaagggaggggaaggctt 428  Q
    ||||||||||||||||||||||||||||||||| | || |||||||    
T  1840031 ctaaggctttgtttgcgagtttggaggggaaggaaaggaaaggctt 1839986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 384 - 437
Target Start/End: Complemental strand, 12506402 - 12506350
Alignment:
Q  384 taaggctttgtttgcgagtttggaggggaagggaggggaaggcttaggaaaaaa 437  Q
    ||||| ||||||||||||||||||| ||||||||||||||| ||| ||||||||    
T  12506402 taaggttttgtttgcgagtttggagaggaagggaggggaagactt-ggaaaaaa 12506350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 383 - 428
Target Start/End: Original strand, 37659348 - 37659393
Alignment:
Q  383 ctaaggctttgtttgcgagtttggaggggaagggaggggaaggctt 428  Q
    ||||||||||||||| || ||||||||||||||||||||| |||||    
T  37659348 ctaaggctttgtttgagaatttggaggggaagggaggggagggctt 37659393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 386 - 422
Target Start/End: Original strand, 1941868 - 1941904
Alignment:
Q  386 aggctttgtttgcgagtttggaggggaagggagggga 422  Q
    |||||||||||| ||||||||||||||||||||||||    
T  1941868 aggctttgtttgggagtttggaggggaagggagggga 1941904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 384 - 428
Target Start/End: Complemental strand, 34349980 - 34349936
Alignment:
Q  384 taaggctttgtttgcgagtttggaggggaagggaggggaaggctt 428  Q
    ||||| |||||||| ||||||||||||||||| ||||||||||||    
T  34349980 taaggttttgtttgggagtttggaggggaaggaaggggaaggctt 34349936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 422
Target Start/End: Complemental strand, 1942244 - 1942205
Alignment:
Q  383 ctaaggctttgtttgcgagtttggaggggaagggagggga 422  Q
    ||||||||||||||  ||||||||||||||||||||||||    
T  1942244 ctaaggctttgtttaggagtttggaggggaagggagggga 1942205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 381 - 428
Target Start/End: Original strand, 33230859 - 33230906
Alignment:
Q  381 cactaaggctttgtttgcgagtttggaggggaagggaggggaaggctt 428  Q
    |||| |||||||||||| ||||||||||||||||||||| || |||||    
T  33230859 cactgaggctttgtttgggagtttggaggggaagggaggagagggctt 33230906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 382 - 428
Target Start/End: Original strand, 1111051 - 1111097
Alignment:
Q  382 actaaggctttgtttgcgagtttggaggggaagggaggggaaggctt 428  Q
    ||||||| |||||||| ||||||||||||||||||| |||| |||||    
T  1111051 actaaggttttgtttgggagtttggaggggaagggaagggagggctt 1111097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 386 - 428
Target Start/End: Complemental strand, 1111335 - 1111293
Alignment:
Q  386 aggctttgtttgcgagtttggaggggaagggaggggaaggctt 428  Q
    ||||||||||||||||||||||||| ||||| ||||| |||||    
T  1111335 aggctttgtttgcgagtttggagggaaagggtggggagggctt 1111293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 388 - 438
Target Start/End: Complemental strand, 3635683 - 3635633
Alignment:
Q  388 gctttgtttgcgagtttggaggggaagggaggggaaggcttaggaaaaaag 438  Q
    |||||||||||||||||||||||||||||| | || || || |||||||||    
T  3635683 gctttgtttgcgagtttggaggggaagggatgagagggttttggaaaaaag 3635633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 414
Target Start/End: Complemental strand, 12319153 - 12319123
Alignment:
Q  384 taaggctttgtttgcgagtttggaggggaag 414  Q
    |||||||||||||||||||||||||||||||    
T  12319153 taaggctttgtttgcgagtttggaggggaag 12319123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 382 - 432
Target Start/End: Complemental strand, 28722913 - 28722863
Alignment:
Q  382 actaaggctttgtttgcgagtttggaggggaagggaggggaaggcttagga 432  Q
    ||||||||||||||||||||||| |||||||||| | || |||||| ||||    
T  28722913 actaaggctttgtttgcgagttttgaggggaaggaaaggaaaggctaagga 28722863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 382 - 432
Target Start/End: Complemental strand, 28730555 - 28730505
Alignment:
Q  382 actaaggctttgtttgcgagtttggaggggaagggaggggaaggcttagga 432  Q
    ||||||||||||||||||||||| |||||||||| | || |||||| ||||    
T  28730555 actaaggctttgtttgcgagttttgaggggaaggaaaggaaaggctaagga 28730505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 382 - 428
Target Start/End: Complemental strand, 29584441 - 29584395
Alignment:
Q  382 actaaggctttgtttgcgagtttggaggggaagggaggggaaggctt 428  Q
    ||||||||||||||||||||||||||||| | |||| || |||||||    
T  29584441 actaaggctttgtttgcgagtttggagggaaggggaaggaaaggctt 29584395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 383 - 433
Target Start/End: Original strand, 30591772 - 30591822
Alignment:
Q  383 ctaaggctttgtttgcgagtttggaggggaagggaggggaaggcttaggaa 433  Q
    |||||||||||||||||||||| |||||||||| | || |||||| |||||    
T  30591772 ctaaggctttgtttgcgagttttgaggggaaggaaaggaaaggctaaggaa 30591822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 396 - 438
Target Start/End: Original strand, 43239552 - 43239594
Alignment:
Q  396 tgcgagtttggaggggaagggaggggaaggcttaggaaaaaag 438  Q
    ||||||||| |||||||||||||||||||||||  ||||||||    
T  43239552 tgcgagtttagaggggaagggaggggaaggcttgtgaaaaaag 43239594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 386 - 423
Target Start/End: Original strand, 3393887 - 3393924
Alignment:
Q  386 aggctttgtttgcgagtttggaggggaagggaggggaa 423  Q
    |||||||| |||||||||||||||| ||||||||||||    
T  3393887 aggctttgcttgcgagtttggagggaaagggaggggaa 3393924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 422
Target Start/End: Complemental strand, 4074894 - 4074857
Alignment:
Q  385 aaggctttgtttgcgagtttggaggggaagggagggga 422  Q
    ||||||||||||| |||||||||||||| |||||||||    
T  4074894 aaggctttgtttgagagtttggaggggaggggagggga 4074857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 389 - 418
Target Start/End: Original strand, 31149799 - 31149828
Alignment:
Q  389 ctttgtttgcgagtttggaggggaagggag 418  Q
    ||||||||||||||||||||||||||||||    
T  31149799 ctttgtttgcgagtttggaggggaagggag 31149828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 386 - 422
Target Start/End: Complemental strand, 34553339 - 34553302
Alignment:
Q  386 aggctttgtttgcgagtttgga-ggggaagggagggga 422  Q
    |||||||||||||||||||||| |||||||||||||||    
T  34553339 aggctttgtttgcgagtttggagggggaagggagggga 34553302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 412
Target Start/End: Complemental strand, 38676425 - 38676396
Alignment:
Q  383 ctaaggctttgtttgcgagtttggagggga 412  Q
    ||||||||||||||||||||||||||||||    
T  38676425 ctaaggctttgtttgcgagtttggagggga 38676396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 382 - 418
Target Start/End: Original strand, 4734310 - 4734346
Alignment:
Q  382 actaaggctttgtttgcgagtttggaggggaagggag 418  Q
    ||||||| |||||||| ||||||||||||||||||||    
T  4734310 actaaggttttgtttgggagtttggaggggaagggag 4734346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 383 - 415
Target Start/End: Complemental strand, 4873429 - 4873397
Alignment:
Q  383 ctaaggctttgtttgcgagtttggaggggaagg 415  Q
    ||||||||||||||| |||||||||||||||||    
T  4873429 ctaaggctttgtttgtgagtttggaggggaagg 4873397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 386 - 438
Target Start/End: Original strand, 8228406 - 8228458
Alignment:
Q  386 aggctttgtttgcgagtttggaggggaagggaggggaaggcttaggaaaaaag 438  Q
    ||||||||||||||||||||||  |||| ||||||||| ||||  ||||||||    
T  8228406 aggctttgtttgcgagtttggaaaggaatggaggggaatgcttgagaaaaaag 8228458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 382 - 422
Target Start/End: Complemental strand, 13227982 - 13227942
Alignment:
Q  382 actaaggctttgtttgcgagtttggaggggaagggagggga 422  Q
    ||||||||| |||||| |||||||||||||| |||||||||    
T  13227982 actaaggctctgtttgagagtttggaggggaggggagggga 13227942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 386 - 422
Target Start/End: Original strand, 13406301 - 13406337
Alignment:
Q  386 aggctttgtttgcgagtttggaggggaagggagggga 422  Q
    |||||||||||||| |||||||||| |||||||||||    
T  13406301 aggctttgtttgcgtgtttggagggaaagggagggga 13406337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 383 - 415
Target Start/End: Original strand, 21258800 - 21258832
Alignment:
Q  383 ctaaggctttgtttgcgagtttggaggggaagg 415  Q
    |||||||||||||||||||||| ||||||||||    
T  21258800 ctaaggctttgtttgcgagttttgaggggaagg 21258832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 390 - 422
Target Start/End: Complemental strand, 25033639 - 25033607
Alignment:
Q  390 tttgtttgcgagtttggaggggaagggagggga 422  Q
    |||||||| ||||||||||||||||||||||||    
T  25033639 tttgtttgggagtttggaggggaagggagggga 25033607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 388 - 428
Target Start/End: Original strand, 27030031 - 27030071
Alignment:
Q  388 gctttgtttgcgagtttggaggggaagggaggggaaggctt 428  Q
    |||||||||| |||||| ||||| |||||||||||||||||    
T  27030031 gctttgtttgggagttttgagggaaagggaggggaaggctt 27030071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 386 - 414
Target Start/End: Original strand, 27085220 - 27085248
Alignment:
Q  386 aggctttgtttgcgagtttggaggggaag 414  Q
    |||||||||||||||||||||||||||||    
T  27085220 aggctttgtttgcgagtttggaggggaag 27085248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 386 - 422
Target Start/End: Original strand, 34272386 - 34272422
Alignment:
Q  386 aggctttgtttgcgagtttggaggggaagggagggga 422  Q
    |||||||||||| ||||||| ||||||||||||||||    
T  34272386 aggctttgtttgggagtttgaaggggaagggagggga 34272422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 391 - 438
Target Start/End: Original strand, 35616437 - 35616485
Alignment:
Q  391 ttgtttgcgagtttggaggggaagggagggga-aggcttaggaaaaaag 438  Q
    |||||||||||||||||||| |||||| |||| ||| ||||||||||||    
T  35616437 ttgtttgcgagtttggagggaaagggatgggagaggtttaggaaaaaag 35616485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 390 - 438
Target Start/End: Complemental strand, 37659736 - 37659688
Alignment:
Q  390 tttgtttgcgagtttggaggggaagggaggggaaggcttaggaaaaaag 438  Q
    |||||||| ||||||| |||||||||||||||| || || |||||||||    
T  37659736 tttgtttgggagtttgaaggggaagggaggggagggttttggaaaaaag 37659688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 49; Significance: 7e-19; HSPs: 2)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 382 - 438
Target Start/End: Complemental strand, 2235 - 2179
Alignment:
Q  382 actaaggctttgtttgcgagtttggaggggaagggaggggaaggcttaggaaaaaag 438  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||    
T  2235 actaaggctttgtttgcaagtttggaggggaagggaggggaaggcttaagaaaaaag 2179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 384 - 432
Target Start/End: Complemental strand, 13862 - 13814
Alignment:
Q  384 taaggctttgtttgcgagtttggaggggaagggaggggaaggcttagga 432  Q
    ||||||||||||||||||||| |||||||||| | || |||||| ||||    
T  13862 taaggctttgtttgcgagttttgaggggaaggaaaggaaaggctaagga 13814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 49; Significance: 7e-19; HSPs: 56)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 386 - 438
Target Start/End: Original strand, 36886742 - 36886794
Alignment:
Q  386 aggctttgtttgcgagtttggaggggaagggaggggaaggcttaggaaaaaag 438  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  36886742 aggctttgtttgcgagtttggaggggaagggaggggaaggcttgggaaaaaag 36886794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 386 - 438
Target Start/End: Complemental strand, 34154537 - 34154485
Alignment:
Q  386 aggctttgtttgcgagtttggaggggaagggaggggaaggcttaggaaaaaag 438  Q
    |||||||||||||||||||||||||||||||||| |||||||| |||||||||    
T  34154537 aggctttgtttgcgagtttggaggggaagggaggagaaggcttgggaaaaaag 34154485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 386 - 438
Target Start/End: Original strand, 36269615 - 36269667
Alignment:
Q  386 aggctttgtttgcgagtttggaggggaagggaggggaaggcttaggaaaaaag 438  Q
    ||||||||||||||||||||||||||||| ||||||||||||| |||||||||    
T  36269615 aggctttgtttgcgagtttggaggggaagtgaggggaaggcttgggaaaaaag 36269667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 384 - 437
Target Start/End: Complemental strand, 37649827 - 37649774
Alignment:
Q  384 taaggctttgtttgcgagtttggaggggaagggaggggaaggcttaggaaaaaa 437  Q
    |||||||||||||||||||||||||||||| ||||| |||||||| ||||||||    
T  37649827 taaggctttgtttgcgagtttggaggggaatggaggagaaggcttgggaaaaaa 37649774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 382 - 422
Target Start/End: Original strand, 17556536 - 17556576
Alignment:
Q  382 actaaggctttgtttgcgagtttggaggggaagggagggga 422  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  17556536 actaaggctttgtttgcgagtttggaggggaagggagggga 17556576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 386 - 437
Target Start/End: Original strand, 29091959 - 29092010
Alignment:
Q  386 aggctttgtttgcgagtttggaggggaagggaggggaaggcttaggaaaaaa 437  Q
    ||||||||||||||||||||||| |||||||||||||||| || ||||||||    
T  29091959 aggctttgtttgcgagtttggagaggaagggaggggaaggtttgggaaaaaa 29092010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 383 - 422
Target Start/End: Complemental strand, 45565395 - 45565356
Alignment:
Q  383 ctaaggctttgtttgcgagtttggaggggaagggagggga 422  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  45565395 ctaaggctttgtttgcgagtttggaggggaagggagggga 45565356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 384 - 438
Target Start/End: Complemental strand, 39179317 - 39179263
Alignment:
Q  384 taaggctttgtttgcgagtttggaggggaagggaggggaaggcttaggaaaaaag 438  Q
    |||||||||||||| |||||||||||||||||||||||| || || |||||||||    
T  39179317 taaggctttgtttgggagtttggaggggaagggaggggagggttttggaaaaaag 39179263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 384 - 422
Target Start/End: Complemental strand, 52073659 - 52073621
Alignment:
Q  384 taaggctttgtttgcgagtttggaggggaagggagggga 422  Q
    |||||||||||||||||||||||||||||||||||||||    
T  52073659 taaggctttgtttgcgagtttggaggggaagggagggga 52073621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 384 - 437
Target Start/End: Complemental strand, 17760687 - 17760634
Alignment:
Q  384 taaggctttgtttgcgagtttggaggggaagggaggggaaggcttaggaaaaaa 437  Q
    |||| ||||||||||||| |||||||||||||||||||||||||| ||| ||||    
T  17760687 taagcctttgtttgcgagcttggaggggaagggaggggaaggcttgggataaaa 17760634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 389 - 438
Target Start/End: Original strand, 31920172 - 31920221
Alignment:
Q  389 ctttgtttgcgagtttggaggggaagggaggggaaggcttaggaaaaaag 438  Q
    ||||||||||||||||||||||||| ||||||||||| || |||||||||    
T  31920172 ctttgtttgcgagtttggaggggaaaggaggggaaggtttgggaaaaaag 31920221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 383 - 428
Target Start/End: Complemental strand, 32299369 - 32299324
Alignment:
Q  383 ctaaggctttgtttgcgagtttggaggggaagggaggggaaggctt 428  Q
    ||||||||||||||| |||||||||||||||||||||||| |||||    
T  32299369 ctaaggctttgtttgggagtttggaggggaagggaggggagggctt 32299324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 383 - 428
Target Start/End: Complemental strand, 32300321 - 32300276
Alignment:
Q  383 ctaaggctttgtttgcgagtttggaggggaagggaggggaaggctt 428  Q
    ||||||||||||||| |||||||||||||||||||||||| |||||    
T  32300321 ctaaggctttgtttgggagtttggaggggaagggaggggagggctt 32300276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 382 - 422
Target Start/End: Complemental strand, 9595828 - 9595788
Alignment:
Q  382 actaaggctttgtttgcgagtttggaggggaagggagggga 422  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  9595828 actaaggctttgtttgggagtttggaggggaagggagggga 9595788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 383 - 438
Target Start/End: Original strand, 27255078 - 27255133
Alignment:
Q  383 ctaaggctttgtttgcgagtttggaggggaagggaggggaaggcttaggaaaaaag 438  Q
    ||||||||||||||||||||||||||||||||  |||||||| |||  ||||||||    
T  27255078 ctaaggctttgtttgcgagtttggaggggaagaaaggggaagacttgagaaaaaag 27255133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 383 - 422
Target Start/End: Complemental strand, 41432983 - 41432944
Alignment:
Q  383 ctaaggctttgtttgcgagtttggaggggaagggagggga 422  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  41432983 ctaaggctttgtttgcgagtttggaggggaagggaaggga 41432944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 386 - 428
Target Start/End: Complemental strand, 33991805 - 33991763
Alignment:
Q  386 aggctttgtttgcgagtttggaggggaagggaggggaaggctt 428  Q
    |||||||||||| |||||||||||||||||||||||| |||||    
T  33991805 aggctttgtttgggagtttggaggggaagggaggggagggctt 33991763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 386 - 428
Target Start/End: Complemental strand, 40136478 - 40136436
Alignment:
Q  386 aggctttgtttgcgagtttggaggggaagggaggggaaggctt 428  Q
    |||||||||||||||||||||||||||||| | ||||||||||    
T  40136478 aggctttgtttgcgagtttggaggggaaggaaagggaaggctt 40136436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 386 - 428
Target Start/End: Original strand, 43571787 - 43571829
Alignment:
Q  386 aggctttgtttgcgagtttggaggggaagggaggggaaggctt 428  Q
    |||||||||||| |||||||||| |||||||||||||||||||    
T  43571787 aggctttgtttgggagtttggagaggaagggaggggaaggctt 43571829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 388 - 438
Target Start/End: Complemental strand, 52068347 - 52068297
Alignment:
Q  388 gctttgtttgcgagtttggaggggaagggaggggaaggcttaggaaaaaag 438  Q
    ||||||||| |||||||||||||||| ||||||||||||||  ||||||||    
T  52068347 gctttgtttccgagtttggaggggaatggaggggaaggcttgagaaaaaag 52068297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 381 - 438
Target Start/End: Original strand, 12293677 - 12293734
Alignment:
Q  381 cactaaggctttgtttgcgagtttggaggggaagggaggggaaggcttaggaaaaaag 438  Q
    ||||||||||||||||| |||||||||||||| | ||||||| || || |||||||||    
T  12293677 cactaaggctttgtttgggagtttggaggggaggagaggggagggttttggaaaaaag 12293734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 385 - 422
Target Start/End: Complemental strand, 38795229 - 38795192
Alignment:
Q  385 aaggctttgtttgcgagtttggaggggaagggagggga 422  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  38795229 aaggctttgtttgggagtttggaggggaagggagggga 38795192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 384 - 428
Target Start/End: Original strand, 1688033 - 1688077
Alignment:
Q  384 taaggctttgtttgcgagtttggaggggaagggaggggaaggctt 428  Q
    |||||| ||||||| |||||||||||||||||||||||| |||||    
T  1688033 taaggcgttgtttgggagtttggaggggaagggaggggagggctt 1688077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 383 - 415
Target Start/End: Original strand, 5584384 - 5584416
Alignment:
Q  383 ctaaggctttgtttgcgagtttggaggggaagg 415  Q
    |||||||||||||||||||||||||||||||||    
T  5584384 ctaaggctttgtttgcgagtttggaggggaagg 5584416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 386 - 422
Target Start/End: Complemental strand, 49103160 - 49103124
Alignment:
Q  386 aggctttgtttgcgagtttggaggggaagggagggga 422  Q
    ||||| |||||||||||||||||||||||||||||||    
T  49103160 aggctatgtttgcgagtttggaggggaagggagggga 49103124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 422
Target Start/End: Original strand, 2925752 - 2925791
Alignment:
Q  383 ctaaggctttgtttgcgagtttggaggggaagggagggga 422  Q
    ||||||||||||||| ||||||| ||||||||||||||||    
T  2925752 ctaaggctttgtttgggagtttgaaggggaagggagggga 2925791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 415
Target Start/End: Complemental strand, 5584775 - 5584744
Alignment:
Q  384 taaggctttgtttgcgagtttggaggggaagg 415  Q
    ||||||||||||||||||||||||||||||||    
T  5584775 taaggctttgtttgcgagtttggaggggaagg 5584744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 438
Target Start/End: Original strand, 26940475 - 26940530
Alignment:
Q  383 ctaaggctttgtttgcgagtttggaggggaagggaggggaaggcttaggaaaaaag 438  Q
    ||||||||||||||| ||||||||||||||  |||||||| || || |||||||||    
T  26940475 ctaaggctttgtttgagagtttggaggggagaggaggggagggttttggaaaaaag 26940530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 414
Target Start/End: Original strand, 47742405 - 47742436
Alignment:
Q  383 ctaaggctttgtttgcgagtttggaggggaag 414  Q
    ||||||||||||||||||||||||||||||||    
T  47742405 ctaaggctttgtttgcgagtttggaggggaag 47742436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 438
Target Start/End: Complemental strand, 47905901 - 47905846
Alignment:
Q  383 ctaaggctttgtttgcgagtttggaggggaagggaggggaaggcttaggaaaaaag 438  Q
    ||||||||||||||| |||||||||||||| || |||||| || || |||||||||    
T  47905901 ctaaggctttgtttgggagtttggaggggagggaaggggagggttttggaaaaaag 47905846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 418
Target Start/End: Original strand, 666251 - 666285
Alignment:
Q  384 taaggctttgtttgcgagtttggaggggaagggag 418  Q
    |||||||||||||| ||||||||||||||||||||    
T  666251 taaggctttgtttgtgagtttggaggggaagggag 666285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 386 - 428
Target Start/End: Original strand, 896315 - 896357
Alignment:
Q  386 aggctttgtttgcgagtttggaggggaagggaggggaaggctt 428  Q
    |||||||||||| ||||||||||| |||||||||||| |||||    
T  896315 aggctttgtttgggagtttggaggagaagggaggggagggctt 896357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 382 - 420
Target Start/End: Complemental strand, 40707411 - 40707373
Alignment:
Q  382 actaaggctttgtttgcgagtttggaggggaagggaggg 420  Q
    |||||||||||||||| |||||||||||||||| |||||    
T  40707411 actaaggctttgtttgggagtttggaggggaagagaggg 40707373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 386 - 428
Target Start/End: Original strand, 42161872 - 42161914
Alignment:
Q  386 aggctttgtttgcgagtttggaggggaagggaggggaaggctt 428  Q
    |||||||||||| |||||||||||||||| ||||||| |||||    
T  42161872 aggctttgtttgggagtttggaggggaagagaggggagggctt 42161914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 387 - 425
Target Start/End: Original strand, 44699791 - 44699829
Alignment:
Q  387 ggctttgtttgcgagtttggaggggaagggaggggaagg 425  Q
    |||||||||||||||||| |||||||||||| |||||||    
T  44699791 ggctttgtttgcgagttttgaggggaagggaagggaagg 44699829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 386 - 420
Target Start/End: Complemental strand, 51303382 - 51303348
Alignment:
Q  386 aggctttgtttgcgagtttggaggggaagggaggg 420  Q
    ||||||||||||||||||| |||||||||||||||    
T  51303382 aggctttgtttgcgagtttagaggggaagggaggg 51303348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 386 - 415
Target Start/End: Original strand, 2909021 - 2909050
Alignment:
Q  386 aggctttgtttgcgagtttggaggggaagg 415  Q
    ||||||||||||||||||||||||||||||    
T  2909021 aggctttgtttgcgagtttggaggggaagg 2909050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 428
Target Start/End: Complemental strand, 2909383 - 2909338
Alignment:
Q  383 ctaaggctttgtttgcgagtttggaggggaagggaggggaaggctt 428  Q
    ||||||||||||||| ||||||||||||||||| | || |||||||    
T  2909383 ctaaggctttgtttgggagtttggaggggaaggaaaggaaaggctt 2909338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 412
Target Start/End: Original strand, 7915392 - 7915421
Alignment:
Q  383 ctaaggctttgtttgcgagtttggagggga 412  Q
    ||||||||||||||||||||||||||||||    
T  7915392 ctaaggctttgtttgcgagtttggagggga 7915421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 381 - 422
Target Start/End: Original strand, 8156154 - 8156195
Alignment:
Q  381 cactaaggctttgtttgcgagtttggaggggaagggagggga 422  Q
    ||||||||||||||||| ||||||||| ||||||||| ||||    
T  8156154 cactaaggctttgtttgagagtttggaagggaagggaaggga 8156195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 378 - 419
Target Start/End: Original strand, 15463688 - 15463729
Alignment:
Q  378 ctccactaaggctttgtttgcgagtttggaggggaagggagg 419  Q
    |||||||||||||||||||| || ||||||||||| ||||||    
T  15463688 ctccactaaggctttgtttgggaatttggaggggaggggagg 15463729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 428
Target Start/End: Complemental strand, 27500250 - 27500205
Alignment:
Q  383 ctaaggctttgtttgcgagtttggaggggaagggaggggaaggctt 428  Q
    ||||||| ||||||| |||||||||| ||||||||||||| |||||    
T  27500250 ctaaggcattgtttgggagtttggagaggaagggaggggagggctt 27500205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 381 - 410
Target Start/End: Complemental strand, 36887137 - 36887108
Alignment:
Q  381 cactaaggctttgtttgcgagtttggaggg 410  Q
    ||||||||||||||||||||||||||||||    
T  36887137 cactaaggctttgtttgcgagtttggaggg 36887108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 380 - 417
Target Start/End: Original strand, 43036135 - 43036172
Alignment:
Q  380 ccactaaggctttgtttgcgagtttggaggggaaggga 417  Q
    |||||||||||||||||| |||||||||||||| ||||    
T  43036135 ccactaaggctttgtttgggagtttggaggggagggga 43036172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 420
Target Start/End: Complemental strand, 43572163 - 43572126
Alignment:
Q  383 ctaaggctttgtttgcgagtttggaggggaagggaggg 420  Q
    ||||||||||||||| |||||||||||||| |||||||    
T  43572163 ctaaggctttgtttgggagtttggaggggaggggaggg 43572126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 432
Target Start/End: Complemental strand, 48187568 - 48187519
Alignment:
Q  383 ctaaggctttgtttgcgagtttggaggggaagggaggggaaggcttagga 432  Q
    |||||||||||||||||||||| |||||||||| | || |||||| ||||    
T  48187568 ctaaggctttgtttgcgagttttgaggggaaggaaaggaaaggctaagga 48187519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 416
Target Start/End: Complemental strand, 50476794 - 50476761
Alignment:
Q  383 ctaaggctttgtttgcgagtttggaggggaaggg 416  Q
    ||||||||||||||| ||||||||||||||||||    
T  50476794 ctaaggctttgtttgggagtttggaggggaaggg 50476761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 383 - 419
Target Start/End: Complemental strand, 896702 - 896666
Alignment:
Q  383 ctaaggctttgtttgcgagtttggaggggaagggagg 419  Q
    ||||||||||||||| |||||||||||||| ||||||    
T  896702 ctaaggctttgtttgggagtttggaggggaggggagg 896666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 386 - 422
Target Start/End: Complemental strand, 15464074 - 15464038
Alignment:
Q  386 aggctttgtttgcgagtttggaggggaagggagggga 422  Q
    |||||||||||| ||||||| ||||||||||||||||    
T  15464074 aggctttgtttgggagtttgaaggggaagggagggga 15464038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 389 - 437
Target Start/End: Complemental strand, 28718998 - 28718950
Alignment:
Q  389 ctttgtttgcgagtttggaggggaagggaggggaaggcttaggaaaaaa 437  Q
    ||||||||||||||||||||||||| |||| ||| || || ||||||||    
T  28718998 ctttgtttgcgagtttggaggggaaaggagtggagggttttggaaaaaa 28718950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 383 - 415
Target Start/End: Original strand, 34154153 - 34154185
Alignment:
Q  383 ctaaggctttgtttgcgagtttggaggggaagg 415  Q
    ||||||||||||||| |||||||||||||||||    
T  34154153 ctaaggctttgtttgggagtttggaggggaagg 34154185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 384 - 432
Target Start/End: Complemental strand, 44774020 - 44773972
Alignment:
Q  384 taaggctttgtttgcgagtttggaggggaagggaggggaaggcttagga 432  Q
    ||||||||||||||||||||| ||||||| |||| || || ||||||||    
T  44774020 taaggctttgtttgcgagttttgaggggatgggaaggaaaagcttagga 44773972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 383 - 415
Target Start/End: Original strand, 49534514 - 49534546
Alignment:
Q  383 ctaaggctttgtttgcgagtttggaggggaagg 415  Q
    |||||||||||||||||||||| ||||||||||    
T  49534514 ctaaggctttgtttgcgagttttgaggggaagg 49534546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 384 - 412
Target Start/End: Original strand, 50162016 - 50162044
Alignment:
Q  384 taaggctttgtttgcgagtttggagggga 412  Q
    |||||||||||||||||||||||||||||    
T  50162016 taaggctttgtttgcgagtttggagggga 50162044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 386 - 422
Target Start/End: Complemental strand, 50247859 - 50247823
Alignment:
Q  386 aggctttgtttgcgagtttggaggggaagggagggga 422  Q
    ||||||| |||| ||||||||||||||||||||||||    
T  50247859 aggctttctttgggagtttggaggggaagggagggga 50247823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 386 - 438
Target Start/End: Original strand, 50586920 - 50586972
Alignment:
Q  386 aggctttgtttgcgagtttggaggggaagggaggggaaggcttaggaaaaaag 438  Q
    |||| |||||||| ||||||||||||||||||| |||  |||| |||||||||    
T  50586920 aggccttgtttgcaagtttggaggggaagggagaggagagctttggaaaaaag 50586972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 47; Significance: 1e-17; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 384 - 438
Target Start/End: Complemental strand, 35683684 - 35683630
Alignment:
Q  384 taaggctttgtttgcgagtttggaggggaagggaggggaaggcttaggaaaaaag 438  Q
    |||||||||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  35683684 taaggctttgtttgcgagtttgaaggggaagggaggggaaggtttaggaaaaaag 35683630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 384 - 437
Target Start/End: Complemental strand, 5772930 - 5772877
Alignment:
Q  384 taaggctttgtttgcgagtttggaggggaagggaggggaaggcttaggaaaaaa 437  Q
    |||||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  5772930 taaggctttgtttaagagtttggaggggaagggaggggaaggcttaggaaaaaa 5772877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 386 - 438
Target Start/End: Original strand, 10437858 - 10437910
Alignment:
Q  386 aggctttgtttgcgagtttggaggggaagggaggggaaggcttaggaaaaaag 438  Q
    ||||||||||||||||||||||||||||||||| ||||||||| |||||||||    
T  10437858 aggctttgtttgcgagtttggaggggaagggagaggaaggcttgggaaaaaag 10437910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 386 - 438
Target Start/End: Original strand, 13569261 - 13569313
Alignment:
Q  386 aggctttgtttgcgagtttggaggggaagggaggggaaggcttaggaaaaaag 438  Q
    |||||||||||||||||||||||||||||||||||||| |||| |||||||||    
T  13569261 aggctttgtttgcgagtttggaggggaagggaggggaatgcttgggaaaaaag 13569313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 386 - 438
Target Start/End: Original strand, 18670905 - 18670957
Alignment:
Q  386 aggctttgtttgcgagtttggaggggaagggaggggaaggcttaggaaaaaag 438  Q
    |||||||||||| |||||||||||||||||||||||||||||| |||||||||    
T  18670905 aggctttgtttgtgagtttggaggggaagggaggggaaggcttcggaaaaaag 18670957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 381 - 432
Target Start/End: Original strand, 9684604 - 9684655
Alignment:
Q  381 cactaaggctttgtttgcgagtttggaggggaagggaggggaaggcttagga 432  Q
    |||| |||||||||||| ||||||||||||||||||| ||||||||||||||    
T  9684604 cacttaggctttgtttgggagtttggaggggaagggaagggaaggcttagga 9684655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 386 - 437
Target Start/End: Original strand, 39649442 - 39649493
Alignment:
Q  386 aggctttgtttgcgagtttggaggggaagggaggggaaggcttaggaaaaaa 437  Q
    ||||||||||||||||||||||||| ||||||||| ||||||| ||||||||    
T  39649442 aggctttgtttgcgagtttggagggcaagggagggaaaggcttgggaaaaaa 39649493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 381 - 419
Target Start/End: Original strand, 6491081 - 6491119
Alignment:
Q  381 cactaaggctttgtttgcgagtttggaggggaagggagg 419  Q
    |||||||||||||||||||||||||||||||||||||||    
T  6491081 cactaaggctttgtttgcgagtttggaggggaagggagg 6491119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 386 - 422
Target Start/End: Complemental strand, 1935273 - 1935237
Alignment:
Q  386 aggctttgtttgcgagtttggaggggaagggagggga 422  Q
    |||||||||||||||||||||||||||||||||||||    
T  1935273 aggctttgtttgcgagtttggaggggaagggagggga 1935237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 383 - 422
Target Start/End: Complemental strand, 35708965 - 35708926
Alignment:
Q  383 ctaaggctttgtttgcgagtttggaggggaagggagggga 422  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  35708965 ctaaggctttgtttgtgagtttggaggggaagggagggga 35708926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 383 - 438
Target Start/End: Original strand, 43496376 - 43496431
Alignment:
Q  383 ctaaggctttgtttgcgagtttggaggggaagggaggggaaggcttaggaaaaaag 438  Q
    ||||||||||||||||||||||||||||||||  |||||| || || |||||||||    
T  43496376 ctaaggctttgtttgcgagtttggaggggaagaaaggggagggttttggaaaaaag 43496431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 386 - 428
Target Start/End: Complemental strand, 10295749 - 10295707
Alignment:
Q  386 aggctttgtttgcgagtttggaggggaagggaggggaaggctt 428  Q
    |||||||||||| |||||||||||||||||||||||| |||||    
T  10295749 aggctttgtttgggagtttggaggggaagggaggggagggctt 10295707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 438
Target Start/End: Original strand, 35700930 - 35700984
Alignment:
Q  384 taaggctttgtttgcgagtttggaggggaagggaggggaaggcttaggaaaaaag 438  Q
    |||||||||||||| |||||||||||||| ||||||||| || || |||||||||    
T  35700930 taaggctttgtttgggagtttggaggggaggggaggggagggttttggaaaaaag 35700984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 387 - 420
Target Start/End: Original strand, 9096195 - 9096228
Alignment:
Q  387 ggctttgtttgcgagtttggaggggaagggaggg 420  Q
    ||||||||||||||||||||||||||||||||||    
T  9096195 ggctttgtttgcgagtttggaggggaagggaggg 9096228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 386 - 438
Target Start/End: Complemental strand, 18675921 - 18675869
Alignment:
Q  386 aggctttgtttgcgagtttggaggggaagggaggggaaggcttaggaaaaaag 438  Q
    |||||||||| | ||||||||| ||||||||||| |||||||| |||||||||    
T  18675921 aggctttgttggtgagtttggaagggaagggaggcgaaggcttgggaaaaaag 18675869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 386 - 422
Target Start/End: Original strand, 25598587 - 25598623
Alignment:
Q  386 aggctttgtttgcgagtttggaggggaagggagggga 422  Q
    |||||||||||| ||||||||||||||||||||||||    
T  25598587 aggctttgtttgggagtttggaggggaagggagggga 25598623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 386 - 422
Target Start/End: Original strand, 32824535 - 32824571
Alignment:
Q  386 aggctttgtttgcgagtttggaggggaagggagggga 422  Q
    |||||||||||||||||||||||| ||||||||||||    
T  32824535 aggctttgtttgcgagtttggaggagaagggagggga 32824571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 386 - 422
Target Start/End: Original strand, 38120013 - 38120049
Alignment:
Q  386 aggctttgtttgcgagtttggaggggaagggagggga 422  Q
    |||||||||||| ||||||||||||||||||||||||    
T  38120013 aggctttgtttgggagtttggaggggaagggagggga 38120049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 384 - 428
Target Start/End: Original strand, 38302176 - 38302220
Alignment:
Q  384 taaggctttgtttgcgagtttggaggggaagggaggggaaggctt 428  Q
    ||||| |||||||| |||||||||||||||||||||||| |||||    
T  38302176 taaggttttgtttgggagtttggaggggaagggaggggagggctt 38302220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 385 - 428
Target Start/End: Complemental strand, 25027186 - 25027143
Alignment:
Q  385 aaggctttgtttgcgagtttggaggggaagggaggggaaggctt 428  Q
    |||| |||||||| |||||||||||||||||||||||| |||||    
T  25027186 aaggttttgtttgggagtttggaggggaagggaggggagggctt 25027143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 422
Target Start/End: Complemental strand, 1658441 - 1658403
Alignment:
Q  384 taaggctttgtttgcgagtttggaggggaagggagggga 422  Q
    |||||||||||||| ||||||| ||||||||||||||||    
T  1658441 taaggctttgtttgagagtttgaaggggaagggagggga 1658403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 386 - 432
Target Start/End: Complemental strand, 6620502 - 6620456
Alignment:
Q  386 aggctttgtttgcgagtttggaggggaagggaggggaaggcttagga 432  Q
    ||||||||||||||||||| |||||||||||| || |||||| ||||    
T  6620502 aggctttgtttgcgagttttgaggggaagggaaggaaaggctaagga 6620456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 386 - 420
Target Start/End: Complemental strand, 17093160 - 17093126
Alignment:
Q  386 aggctttgtttgcgagtttggaggggaagggaggg 420  Q
    |||||||||||| ||||||||||||||||||||||    
T  17093160 aggctttgtttgggagtttggaggggaagggaggg 17093126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 424
Target Start/End: Original strand, 4373559 - 4373600
Alignment:
Q  383 ctaaggctttgtttgcgagtttggaggggaagggaggggaag 424  Q
    |||||||||||||||| ||||||||| | |||||||||||||    
T  4373559 ctaaggctttgtttgcaagtttggagagaaagggaggggaag 4373600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 386 - 415
Target Start/End: Original strand, 5772548 - 5772577
Alignment:
Q  386 aggctttgtttgcgagtttggaggggaagg 415  Q
    ||||||||||||||||||||||||||||||    
T  5772548 aggctttgtttgcgagtttggaggggaagg 5772577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 382 - 422
Target Start/End: Original strand, 2163907 - 2163947
Alignment:
Q  382 actaaggctttgtttgcgagtttggaggggaagggagggga 422  Q
    ||||||||| |||||| |||||||||||| |||||||||||    
T  2163907 actaaggctatgtttgggagtttggagggtaagggagggga 2163947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 383 - 415
Target Start/End: Complemental strand, 6922122 - 6922090
Alignment:
Q  383 ctaaggctttgtttgcgagtttggaggggaagg 415  Q
    |||||||||||||||||||||| ||||||||||    
T  6922122 ctaaggctttgtttgcgagttttgaggggaagg 6922090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 388 - 428
Target Start/End: Complemental strand, 10955900 - 10955860
Alignment:
Q  388 gctttgtttgcgagtttggaggggaagggaggggaaggctt 428  Q
    ||||| |||||||||||||||||||||| ||| ||||||||    
T  10955900 gctttatttgcgagtttggaggggaaggaaggtgaaggctt 10955860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 384 - 428
Target Start/End: Complemental strand, 12229674 - 12229630
Alignment:
Q  384 taaggctttgtttgcgagtttggaggggaagggaggggaaggctt 428  Q
    ||||||| |||||| |||||||||||||| ||||||||| |||||    
T  12229674 taaggctctgtttgggagtttggaggggaggggaggggagggctt 12229630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 390 - 422
Target Start/End: Original strand, 27479989 - 27480021
Alignment:
Q  390 tttgtttgcgagtttggaggggaagggagggga 422  Q
    |||||||| ||||||||||||||||||||||||    
T  27479989 tttgtttgagagtttggaggggaagggagggga 27480021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 386 - 414
Target Start/End: Original strand, 35683291 - 35683319
Alignment:
Q  386 aggctttgtttgcgagtttggaggggaag 414  Q
    |||||||||||||||||||||||||||||    
T  35683291 aggctttgtttgcgagtttggaggggaag 35683319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 384 - 428
Target Start/End: Original strand, 38568195 - 38568239
Alignment:
Q  384 taaggctttgtttgcgagtttggaggggaagggaggggaaggctt 428  Q
    ||||||||||||||||||||||||| ||  ||| |||||||||||    
T  38568195 taaggctttgtttgcgagtttggagaggggggggggggaaggctt 38568239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 47; Significance: 1e-17; HSPs: 63)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 388 - 438
Target Start/End: Original strand, 16318491 - 16318541
Alignment:
Q  388 gctttgtttgcgagtttggaggggaagggaggggaaggcttaggaaaaaag 438  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  16318491 gctttgtttgcgagttttgaggggaagggaggggaaggcttaggaaaaaag 16318541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 381 - 438
Target Start/End: Original strand, 33500387 - 33500444
Alignment:
Q  381 cactaaggctttgtttgcgagtttggaggggaagggaggggaaggcttaggaaaaaag 438  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||  ||||||||    
T  33500387 cactaaggctttgtttgcgagtttggaagggaagggaggggaaggcttgagaaaaaag 33500444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 386 - 437
Target Start/End: Complemental strand, 29114443 - 29114392
Alignment:
Q  386 aggctttgtttgcgagtttggaggggaagggaggggaaggcttaggaaaaaa 437  Q
    |||||||||||||||||||||| |||||||||||||||||||| ||||||||    
T  29114443 aggctttgtttgcgagtttggaagggaagggaggggaaggcttgggaaaaaa 29114392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 388 - 438
Target Start/End: Complemental strand, 38137041 - 38136991
Alignment:
Q  388 gctttgtttgcgagtttggaggggaagggaggggaaggcttaggaaaaaag 438  Q
    |||||||||||||||||||||||||||||||||||||||||  ||||||||    
T  38137041 gctttgtttgcgagtttggaggggaagggaggggaaggcttgagaaaaaag 38136991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 384 - 437
Target Start/End: Complemental strand, 12709045 - 12708992
Alignment:
Q  384 taaggctttgtttgcgagtttggaggggaagggaggggaaggcttaggaaaaaa 437  Q
    |||||||||||||||||||||||||||||  |||||||||||||| ||||||||    
T  12709045 taaggctttgtttgcgagtttggaggggattggaggggaaggcttgggaaaaaa 12708992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 390 - 438
Target Start/End: Complemental strand, 28175669 - 28175621
Alignment:
Q  390 tttgtttgcgagtttggaggggaagggaggggaaggcttaggaaaaaag 438  Q
    ||||||||||||||||||| ||||||||||||||||||| |||||||||    
T  28175669 tttgtttgcgagtttggagaggaagggaggggaaggcttgggaaaaaag 28175621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 384 - 437
Target Start/End: Complemental strand, 27485453 - 27485400
Alignment:
Q  384 taaggctttgtttgcgagtttggaggggaagggaggggaaggcttaggaaaaaa 437  Q
    ||||||||||||||||||||||||| ||||||||||||| || || ||||||||    
T  27485453 taaggctttgtttgcgagtttggagtggaagggaggggaggggtttggaaaaaa 27485400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 386 - 438
Target Start/End: Original strand, 675243 - 675295
Alignment:
Q  386 aggctttgtttgcgagtttggaggggaagggaggggaaggcttaggaaaaaag 438  Q
    ||||||||||||||||||||||||||||||||  ||| ||||| |||||||||    
T  675243 aggctttgtttgcgagtttggaggggaagggaaaggagggctttggaaaaaag 675295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 386 - 438
Target Start/End: Original strand, 45823427 - 45823479
Alignment:
Q  386 aggctttgtttgcgagtttggaggggaagggaggggaaggcttaggaaaaaag 438  Q
    |||||||||||||||||||||| | ||||||||||||| |||| |||||||||    
T  45823427 aggctttgtttgcgagtttggaagagaagggaggggaatgcttgggaaaaaag 45823479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 383 - 438
Target Start/End: Complemental strand, 31187306 - 31187251
Alignment:
Q  383 ctaaggctttgtttgcgagtttggaggggaagggaggggaaggcttaggaaaaaag 438  Q
    ||||||||||||||| |||||||||||||| ||||||||| || || |||||||||    
T  31187306 ctaaggctttgtttgggagtttggaggggacgggaggggatggttttggaaaaaag 31187251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 383 - 438
Target Start/End: Complemental strand, 41709329 - 41709274
Alignment:
Q  383 ctaaggctttgtttgcgagtttggaggggaagggaggggaaggcttaggaaaaaag 438  Q
    |||||| ||||| |||||||||| |||||||| ||||||||||||| |||||||||    
T  41709329 ctaaggttttgtctgcgagtttgcaggggaagagaggggaaggcttgggaaaaaag 41709274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 390 - 437
Target Start/End: Original strand, 43793301 - 43793348
Alignment:
Q  390 tttgtttgcgagtttggaggggaagggaggggaaggcttaggaaaaaa 437  Q
    ||||||||||||||| ||||| ||||||||||||||||||| ||||||    
T  43793301 tttgtttgcgagttttgagggaaagggaggggaaggcttagaaaaaaa 43793348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 386 - 428
Target Start/End: Complemental strand, 20534190 - 20534148
Alignment:
Q  386 aggctttgtttgcgagtttggaggggaagggaggggaaggctt 428  Q
    |||||||||||| |||||||||||||||||||||||| |||||    
T  20534190 aggctttgtttgggagtttggaggggaagggaggggagggctt 20534148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 386 - 428
Target Start/End: Original strand, 22845050 - 22845092
Alignment:
Q  386 aggctttgtttgcgagtttggaggggaagggaggggaaggctt 428  Q
    |||||||||||| |||||||||||||||||||||||| |||||    
T  22845050 aggctttgtttgggagtttggaggggaagggaggggagggctt 22845092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 386 - 428
Target Start/End: Complemental strand, 31530286 - 31530244
Alignment:
Q  386 aggctttgtttgcgagtttggaggggaagggaggggaaggctt 428  Q
    |||||||||||| |||||||||||||||||||||||| |||||    
T  31530286 aggctttgtttgagagtttggaggggaagggaggggagggctt 31530244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 388 - 422
Target Start/End: Original strand, 35959072 - 35959106
Alignment:
Q  388 gctttgtttgcgagtttggaggggaagggagggga 422  Q
    |||||||||||||||||||||||||||||||||||    
T  35959072 gctttgtttgcgagtttggaggggaagggagggga 35959106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 383 - 437
Target Start/End: Complemental strand, 46177139 - 46177085
Alignment:
Q  383 ctaaggctttgtttgcgagtttggaggggaagggaggggaaggcttaggaaaaaa 437  Q
    ||||||||||||||| |||||||||||| ||||||||||| || || ||||||||    
T  46177139 ctaaggctttgtttgtgagtttggagggaaagggaggggagggttttggaaaaaa 46177085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 381 - 438
Target Start/End: Complemental strand, 7182405 - 7182348
Alignment:
Q  381 cactaaggctttgtttgcgagtttggaggggaagggaggggaaggcttaggaaaaaag 438  Q
    |||| |||||||||||| |||||||||||||| ||||||||| || || |||||||||    
T  7182405 cacttaggctttgtttgggagtttggaggggaggggaggggagggttttggaaaaaag 7182348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 383 - 428
Target Start/End: Original strand, 17622288 - 17622333
Alignment:
Q  383 ctaaggctttgtttgcgagtttggaggggaagggaggggaaggctt 428  Q
    |||||| |||||||| |||||||||||||||||||||||| |||||    
T  17622288 ctaaggttttgtttgggagtttggaggggaagggaggggagggctt 17622333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 381 - 422
Target Start/End: Original strand, 21081212 - 21081253
Alignment:
Q  381 cactaaggctttgtttgcgagtttggaggggaagggagggga 422  Q
    |||| ||||||||||||||||||||||||||||| |||||||    
T  21081212 cacttaggctttgtttgcgagtttggaggggaagagagggga 21081253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 383 - 428
Target Start/End: Original strand, 37756534 - 37756579
Alignment:
Q  383 ctaaggctttgtttgcgagtttggaggggaagggaggggaaggctt 428  Q
    |||||||||||||||  ||||||||||||||||||||||| |||||    
T  37756534 ctaaggctttgtttggaagtttggaggggaagggaggggagggctt 37756579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 388 - 425
Target Start/End: Original strand, 42650517 - 42650554
Alignment:
Q  388 gctttgtttgcgagtttggaggggaagggaggggaagg 425  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  42650517 gctttgtttgcgagtttggaggggaagcgaggggaagg 42650554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 390 - 438
Target Start/End: Original strand, 16422795 - 16422843
Alignment:
Q  390 tttgtttgcgagtttggaggggaagggaggggaaggcttaggaaaaaag 438  Q
    |||||||| ||||||||||||||||||||||||| |||| | |||||||    
T  16422795 tttgtttgtgagtttggaggggaagggaggggaaagcttggaaaaaaag 16422843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 384 - 428
Target Start/End: Original strand, 38136650 - 38136694
Alignment:
Q  384 taaggctttgtttgcgagtttggaggggaagggaggggaaggctt 428  Q
    |||||||||||||| ||||||||||||||||||| || |||||||    
T  38136650 taaggctttgtttgggagtttggaggggaagggaaggaaaggctt 38136694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 384 - 428
Target Start/End: Original strand, 41363628 - 41363672
Alignment:
Q  384 taaggctttgtttgcgagtttggaggggaagggaggggaaggctt 428  Q
    |||||||||||||| ||||||||||| |||||||||||| |||||    
T  41363628 taaggctttgtttgagagtttggaggcgaagggaggggagggctt 41363672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 386 - 422
Target Start/End: Complemental strand, 41844698 - 41844662
Alignment:
Q  386 aggctttgtttgcgagtttggaggggaagggagggga 422  Q
    |||||||||||| ||||||||||||||||||||||||    
T  41844698 aggctttgtttgggagtttggaggggaagggagggga 41844662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 381 - 425
Target Start/End: Original strand, 44076465 - 44076509
Alignment:
Q  381 cactaaggctttgtttgcgagtttggaggggaagggaggggaagg 425  Q
    ||||||| |||||||||||||||||||||||| |||| |||||||    
T  44076465 cactaagactttgtttgcgagtttggaggggaggggaagggaagg 44076509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 386 - 422
Target Start/End: Original strand, 52636633 - 52636669
Alignment:
Q  386 aggctttgtttgcgagtttggaggggaagggagggga 422  Q
    |||||||||||||||||||||||||||||||| ||||    
T  52636633 aggctttgtttgcgagtttggaggggaagggatggga 52636669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 422
Target Start/End: Original strand, 7182002 - 7182041
Alignment:
Q  383 ctaaggctttgtttgcgagtttggaggggaagggagggga 422  Q
    |||||| |||||||| ||||||||||||||||||||||||    
T  7182002 ctaaggttttgtttgggagtttggaggggaagggagggga 7182041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 385 - 428
Target Start/End: Complemental strand, 32060910 - 32060867
Alignment:
Q  385 aaggctttgtttgcgagtttggaggggaagggaggggaaggctt 428  Q
    ||||||||||||| |||||||||| ||||||||||||| |||||    
T  32060910 aaggctttgtttgggagtttggagtggaagggaggggagggctt 32060867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 422
Target Start/End: Original strand, 32648819 - 32648858
Alignment:
Q  383 ctaaggctttgtttgcgagtttggaggggaagggagggga 422  Q
    ||||||||||||||| | ||||||||||||||||||||||    
T  32648819 ctaaggctttgtttgggggtttggaggggaagggagggga 32648858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 422
Target Start/End: Original strand, 38365898 - 38365937
Alignment:
Q  383 ctaaggctttgtttgcgagtttggaggggaagggagggga 422  Q
    ||||||||||||||| |||||||||||||| |||||||||    
T  38365898 ctaaggctttgtttgggagtttggaggggaggggagggga 38365937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 422
Target Start/End: Complemental strand, 42759851 - 42759812
Alignment:
Q  383 ctaaggctttgtttgcgagtttggaggggaagggagggga 422  Q
    ||||||||||||||||  ||||||||||||||||||||||    
T  42759851 ctaaggctttgtttgcacgtttggaggggaagggagggga 42759812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 382 - 425
Target Start/End: Original strand, 45899259 - 45899302
Alignment:
Q  382 actaaggctttgtttgcgagtttggaggggaagggaggggaagg 425  Q
    ||||||||| |||||| |||||||||||||| ||||||||||||    
T  45899259 actaaggctctgtttgggagtttggaggggaggggaggggaagg 45899302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 386 - 417
Target Start/End: Complemental strand, 52430763 - 52430732
Alignment:
Q  386 aggctttgtttgcgagtttggaggggaaggga 417  Q
    ||||||||||||||||||||||||||||||||    
T  52430763 aggctttgtttgcgagtttggaggggaaggga 52430732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 386 - 437
Target Start/End: Original strand, 54806347 - 54806398
Alignment:
Q  386 aggctttgtttgcgagtttggaggggaagggaggggaaggcttaggaaaaaa 437  Q
    |||||||||||| |||||||||| ||||||||||||| || || ||||||||    
T  54806347 aggctttgtttgggagtttggagaggaagggaggggagggttttggaaaaaa 54806398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 386 - 428
Target Start/End: Complemental strand, 24280174 - 24280132
Alignment:
Q  386 aggctttgtttgcgagtttggaggggaagggaggggaaggctt 428  Q
    |||||||||||| |||||| |||||||||||||||||| ||||    
T  24280174 aggctttgtttgggagtttcgaggggaagggaggggaaagctt 24280132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 438
Target Start/End: Complemental strand, 32948728 - 32948674
Alignment:
Q  384 taaggctttgtttgcgagtttggaggggaagggaggggaaggcttaggaaaaaag 438  Q
    |||||||||||||| ||||||||| |||| ||||||||| || || |||||||||    
T  32948728 taaggctttgtttgggagtttggaagggaggggaggggagggtttcggaaaaaag 32948674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 422
Target Start/End: Original strand, 36151187 - 36151225
Alignment:
Q  384 taaggctttgtttgcgagtttggaggggaagggagggga 422  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  36151187 taaggctttatttgggagtttggaggggaagggagggga 36151225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 386 - 428
Target Start/End: Complemental strand, 38366289 - 38366247
Alignment:
Q  386 aggctttgtttgcgagtttggaggggaagggaggggaaggctt 428  Q
    |||||||||||| |||||||||| ||||||||||||| |||||    
T  38366289 aggctttgtttgggagtttggagaggaagggaggggagggctt 38366247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 381 - 415
Target Start/End: Complemental strand, 40632341 - 40632307
Alignment:
Q  381 cactaaggctttgtttgcgagtttggaggggaagg 415  Q
    |||||||||||||||||||||||| ||||||||||    
T  40632341 cactaaggctttgtttgcgagttttgaggggaagg 40632307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 382 - 432
Target Start/End: Original strand, 44232989 - 44233039
Alignment:
Q  382 actaaggctttgtttgcgagtttggaggggaagggaggggaaggcttagga 432  Q
    ||||||||||||||||||||||| |||||||||| | || |||||| ||||    
T  44232989 actaaggctttgtttgcgagttttgaggggaaggaaaggaaaggctaagga 44233039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 386 - 420
Target Start/End: Complemental strand, 45899545 - 45899511
Alignment:
Q  386 aggctttgtttgcgagtttggaggggaagggaggg 420  Q
    |||||||||||| ||||||||||||||||||||||    
T  45899545 aggctttgtttgggagtttggaggggaagggaggg 45899511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 386 - 428
Target Start/End: Complemental strand, 48620543 - 48620501
Alignment:
Q  386 aggctttgtttgcgagtttggaggggaagggaggggaaggctt 428  Q
    ||||||||||||||||||||||||||| |||| || |||||||    
T  48620543 aggctttgtttgcgagtttggaggggaggggaaggaaaggctt 48620501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 388 - 438
Target Start/End: Complemental strand, 49668310 - 49668260
Alignment:
Q  388 gctttgtttgcgagtttggaggggaagggaggggaaggcttaggaaaaaag 438  Q
    ||||||||||||||||||||| ||||| |||||||||| ||  ||||||||    
T  49668310 gctttgtttgcgagtttggagaggaagtgaggggaaggtttgagaaaaaag 49668260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 387 - 424
Target Start/End: Complemental strand, 30198979 - 30198942
Alignment:
Q  387 ggctttgtttgcgagtttggaggggaagggaggggaag 424  Q
    |||||||||||||||||| |||||||| ||||||||||    
T  30198979 ggctttgtttgcgagtttagaggggaatggaggggaag 30198942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 420
Target Start/End: Original strand, 41844311 - 41844348
Alignment:
Q  383 ctaaggctttgtttgcgagtttggaggggaagggaggg 420  Q
    ||||||||||||||| |||||||||||||| |||||||    
T  41844311 ctaaggctttgtttgggagtttggaggggaggggaggg 41844348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 384 - 417
Target Start/End: Complemental strand, 42650897 - 42650864
Alignment:
Q  384 taaggctttgtttgcgagtttggaggggaaggga 417  Q
    |||||||||||||| |||||||||||||||||||    
T  42650897 taaggctttgtttgtgagtttggaggggaaggga 42650864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 420
Target Start/End: Original strand, 49936388 - 49936425
Alignment:
Q  383 ctaaggctttgtttgcgagtttggaggggaagggaggg 420  Q
    |||||||||| |||| ||||||||||||||||||||||    
T  49936388 ctaaggctttctttgggagtttggaggggaagggaggg 49936425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 428
Target Start/End: Complemental strand, 50643089 - 50643044
Alignment:
Q  383 ctaaggctttgtttgcgagtttggaggggaagggaggggaaggctt 428  Q
    ||||| ||||||||| ||||||||||||||||||| |||| |||||    
T  50643089 ctaagactttgtttgggagtttggaggggaagggatgggagggctt 50643044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 387 - 420
Target Start/End: Original strand, 54205707 - 54205740
Alignment:
Q  387 ggctttgtttgcgagtttggaggggaagggaggg 420  Q
    ||||| ||||||||||||||||||||||||||||    
T  54205707 ggcttcgtttgcgagtttggaggggaagggaggg 54205740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 384 - 420
Target Start/End: Original strand, 904072 - 904108
Alignment:
Q  384 taaggctttgtttgcgagtttggaggggaagggaggg 420  Q
    |||||||||||||| |||||||||||||| |||||||    
T  904072 taaggctttgtttgggagtttggaggggaggggaggg 904108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 384 - 432
Target Start/End: Original strand, 8084994 - 8085042
Alignment:
Q  384 taaggctttgtttgcgagtttggaggggaagggaggggaaggcttagga 432  Q
    ||||||||||||||||||||| |||||||||| | || |||||| ||||    
T  8084994 taaggctttgtttgcgagttttgaggggaaggaaaggaaaggctaagga 8085042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 383 - 415
Target Start/End: Original strand, 12685879 - 12685911
Alignment:
Q  383 ctaaggctttgtttgcgagtttggaggggaagg 415  Q
    |||||||||||||||||||||| ||||||||||    
T  12685879 ctaaggctttgtttgcgagttttgaggggaagg 12685911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 384 - 428
Target Start/End: Complemental strand, 16535956 - 16535912
Alignment:
Q  384 taaggctttgtttgcgagtttggaggggaagggaggggaaggctt 428  Q
    ||||| |||||||| ||||||||| |||||||||||||| |||||    
T  16535956 taaggttttgtttgggagtttggatgggaagggaggggagggctt 16535912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 386 - 422
Target Start/End: Original strand, 21357980 - 21358016
Alignment:
Q  386 aggctttgtttgcgagtttggaggggaagggagggga 422  Q
    ||||| |||||| ||||||||||||||||||||||||    
T  21357980 aggctctgtttgagagtttggaggggaagggagggga 21358016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 383 - 415
Target Start/End: Original strand, 28511493 - 28511525
Alignment:
Q  383 ctaaggctttgtttgcgagtttggaggggaagg 415  Q
    |||||||||||||||||||||| ||||||||||    
T  28511493 ctaaggctttgtttgcgagttttgaggggaagg 28511525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 384 - 428
Target Start/End: Original strand, 29114059 - 29114103
Alignment:
Q  384 taaggctttgtttgcgagtttggaggggaagggaggggaaggctt 428  Q
    |||||||||||||| ||||||||||||||||| | || |||||||    
T  29114059 taaggctttgtttgggagtttggaggggaaggaaaggaaaggctt 29114103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 386 - 422
Target Start/End: Original strand, 31340659 - 31340695
Alignment:
Q  386 aggctttgtttgcgagtttggaggggaagggagggga 422  Q
    |||||||||||| ||||||||||||||||||| ||||    
T  31340659 aggctttgtttgggagtttggaggggaagggatggga 31340695  T

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Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 386 - 438
Target Start/End: Complemental strand, 41364021 - 41363969
Alignment:
Q  386 aggctttgtttgcgagtttggaggggaagggaggggaaggcttaggaaaaaag 438  Q
    |||||||||||| |||||||||||||| ||||||| | || || |||||||||    
T  41364021 aggctttgtttgggagtttggaggggaggggagggaacggttttggaaaaaag 41363969  T

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Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 381 - 417
Target Start/End: Complemental strand, 43793993 - 43793957
Alignment:
Q  381 cactaaggctttgtttgcgagtttggaggggaaggga 417  Q
    |||| ||||||||||| ||||||||||||||||||||    
T  43793993 cacttaggctttgtttacgagtttggaggggaaggga 43793957  T

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Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 384 - 428
Target Start/End: Complemental strand, 55510169 - 55510125
Alignment:
Q  384 taaggctttgtttgcgagtttggaggggaagggaggggaaggctt 428  Q
    |||||||||||||| |||||||||||||| ||||  |||||||||    
T  55510169 taaggctttgtttgggagtttggaggggaggggaatggaaggctt 55510125  T

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Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 384 - 432
Target Start/End: Original strand, 56205255 - 56205303
Alignment:
Q  384 taaggctttgtttgcgagtttggaggggaagggaggggaaggcttagga 432  Q
    ||||||||||||||||||||| |||||||||| | || |||||| ||||    
T  56205255 taaggctttgtttgcgagttttgaggggaaggaaaggaaaggctaagga 56205303  T

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Target: scaffold0128 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 386 - 438
Target Start/End: Original strand, 26251 - 26303
Alignment:
Q  386 aggctttgtttgcgagtttggaggggaagggaggggaaggcttaggaaaaaag 438  Q
    ||||||||||| |||||||| |||||||||||||||||||||| |||||||||    
T  26251 aggctttgtttacgagtttgaaggggaagggaggggaaggcttgggaaaaaag 26303  T

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Target: scaffold0051 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 386 - 437
Target Start/End: Complemental strand, 6967 - 6916
Alignment:
Q  386 aggctttgtttgcgagtttggaggggaagggaggggaaggcttaggaaaaaa 437  Q
    ||||||||||||||||||||||||||||||||||||||| |||  |||||||    
T  6967 aggctttgtttgcgagtttggaggggaagggaggggaagtcttgagaaaaaa 6916  T

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Target: scaffold0051; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 386 - 437
Target Start/End: Complemental strand, 7950 - 7899
Alignment:
Q  386 aggctttgtttgcgagtttggaggggaagggaggggaaggcttaggaaaaaa 437  Q
    ||||||||||||||||||||||||||||||||||||||| |||  |||||||    
T  7950 aggctttgtttgcgagtttggaggggaagggaggggaagtcttgagaaaaaa 7899  T

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Target: scaffold0248 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0248
Description:

Target: scaffold0248; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 388 - 437
Target Start/End: Complemental strand, 403 - 354
Alignment:
Q  388 gctttgtttgcgagtttggaggggaagggaggggaaggcttaggaaaaaa 437  Q
    |||||||||||||||||||||||||||||||||||| |||| ||| ||||    
T  403 gctttgtttgcgagtttggaggggaagggaggggaaagcttgggataaaa 354  T

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Target: scaffold0388 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0388
Description:

Target: scaffold0388; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 389 - 437
Target Start/End: Original strand, 6940 - 6987
Alignment:
Q  389 ctttgtttgcgagtttggaggggaagggaggggaaggcttaggaaaaaa 437  Q
    |||||||||||||||||||||||||||||||||||| ||| ||||||||    
T  6940 ctttgtttgcgagtttggaggggaagggaggggaagactt-ggaaaaaa 6987  T

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Target: scaffold1163 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold1163
Description:

Target: scaffold1163; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 387 - 438
Target Start/End: Original strand, 1931 - 1982
Alignment:
Q  387 ggctttgtttgcgagtttggaggggaagggaggggaaggcttaggaaaaaag 438  Q
    ||||||||||||||||||||||||||||||| |||||| ||| | |||||||    
T  1931 ggctttgtttgcgagtttggaggggaagggaagggaagactttgaaaaaaag 1982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0717 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0717
Description:

Target: scaffold0717; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 386 - 428
Target Start/End: Complemental strand, 1842 - 1800
Alignment:
Q  386 aggctttgtttgcgagtttggaggggaagggaggggaaggctt 428  Q
    |||||||||||| |||||||||||||||||||||||| |||||    
T  1842 aggctttgtttgagagtttggaggggaagggaggggagggctt 1800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 386 - 428
Target Start/End: Original strand, 35273 - 35315
Alignment:
Q  386 aggctttgtttgcgagtttggaggggaagggaggggaaggctt 428  Q
    |||||||||||| |||||||||||||||||||||||| |||||    
T  35273 aggctttgtttgggagtttggaggggaagggaggggagggctt 35315  T

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Target: scaffold0026 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 384 - 437
Target Start/End: Complemental strand, 82922 - 82869
Alignment:
Q  384 taaggctttgtttgcgagtttggaggggaagggaggggaaggcttaggaaaaaa 437  Q
    ||||||||||||||||||||||||||| || | |||||| ||||| ||||||||    
T  82922 taaggctttgtttgcgagtttggagggaaatgaaggggagggctttggaaaaaa 82869  T

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Target: scaffold0031 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 383 - 415
Target Start/End: Complemental strand, 93708 - 93676
Alignment:
Q  383 ctaaggctttgtttgcgagtttggaggggaagg 415  Q
    |||||||||||||||||||||||||||||||||    
T  93708 ctaaggctttgtttgcgagtttggaggggaagg 93676  T

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Target: scaffold1562 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold1562
Description:

Target: scaffold1562; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 389 - 428
Target Start/End: Complemental strand, 400 - 361
Alignment:
Q  389 ctttgtttgcgagtttggaggggaagggaggggaaggctt 428  Q
    ||||||||| |||||||||||||||||||||||| |||||    
T  400 ctttgtttgagagtttggaggggaagggaggggagggctt 361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1158 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold1158
Description:

Target: scaffold1158; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 389 - 428
Target Start/End: Original strand, 2193 - 2232
Alignment:
Q  389 ctttgtttgcgagtttggaggggaagggaggggaaggctt 428  Q
    ||||||||| |||||||||||||||||||||||| |||||    
T  2193 ctttgtttgagagtttggaggggaagggaggggagggctt 2232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 386 - 437
Target Start/End: Original strand, 82667 - 82718
Alignment:
Q  386 aggctttgtttgcgagtttggaggggaagggaggggaaggcttaggaaaaaa 437  Q
    ||||||| |||| |||||||||||| ||||||||||| ||||| ||||||||    
T  82667 aggctttctttgtgagtttggagggtaagggaggggagggctttggaaaaaa 82718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 386 - 425
Target Start/End: Original strand, 59672 - 59711
Alignment:
Q  386 aggctttgtttgcgagtttggaggggaagggaggggaagg 425  Q
    |||||||||||| |||||||||||||| ||||||||||||    
T  59672 aggctttgtttgggagtttggaggggaggggaggggaagg 59711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0636 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0636
Description:

Target: scaffold0636; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 382 - 428
Target Start/End: Complemental strand, 8658 - 8612
Alignment:
Q  382 actaaggctttgtttgcgagtttggaggggaagggaggggaaggctt 428  Q
    |||||||||||||||| | |||||||||||||| ||||||| |||||    
T  8658 actaaggctttgtttgggggtttggaggggaagagaggggagggctt 8612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 383 - 413
Target Start/End: Complemental strand, 17703 - 17673
Alignment:
Q  383 ctaaggctttgtttgcgagtttggaggggaa 413  Q
    |||||||||||||||||||||||||||||||    
T  17703 ctaaggctttgtttgcgagtttggaggggaa 17673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 381 - 415
Target Start/End: Original strand, 44373 - 44407
Alignment:
Q  381 cactaaggctttgtttgcgagtttggaggggaagg 415  Q
    |||||||||||||||||||||||| ||||||||||    
T  44373 cactaaggctttgtttgcgagttttgaggggaagg 44407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 389 - 438
Target Start/End: Complemental strand, 9606 - 9557
Alignment:
Q  389 ctttgtttgcgagtttggaggggaagggaggggaaggcttaggaaaaaag 438  Q
    |||||||||||||||||||||||||| || || ||| ||||| |||||||    
T  9606 ctttgtttgcgagtttggaggggaagtgaaggaaagacttagaaaaaaag 9557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 383 - 415
Target Start/End: Complemental strand, 9968 - 9936
Alignment:
Q  383 ctaaggctttgtttgcgagtttggaggggaagg 415  Q
    |||||||||||||||||||||| ||||||||||    
T  9968 ctaaggctttgtttgcgagttttgaggggaagg 9936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 383 - 415
Target Start/End: Complemental strand, 4095 - 4063
Alignment:
Q  383 ctaaggctttgtttgcgagtttggaggggaagg 415  Q
    |||||||||||||||||||||| ||||||||||    
T  4095 ctaaggctttgtttgcgagttttgaggggaagg 4063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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