View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1614_low_39 (Length: 401)

Name: NF1614_low_39
Description: NF1614
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1614_low_39
NF1614_low_39
[»] chr4 (65 HSPs)
chr4 (13-271)||(44145842-44146100)
chr4 (145-376)||(17182490-17182728)
chr4 (148-338)||(43961449-43961644)
chr4 (146-375)||(55080581-55080815)
chr4 (151-376)||(22186720-22186950)
chr4 (173-375)||(47846090-47846298)
chr4 (148-376)||(56135750-56135965)
chr4 (173-376)||(7977530-7977740)
chr4 (173-376)||(37761466-37761673)
chr4 (173-376)||(54576362-54576572)
chr4 (193-385)||(29993826-29994022)
chr4 (193-338)||(4437480-4437629)
chr4 (193-376)||(5824902-5825085)
chr4 (194-318)||(54001162-54001289)
chr4 (184-375)||(34995052-34995247)
chr4 (13-94)||(44155971-44156052)
chr4 (194-376)||(51329797-51329983)
chr4 (177-376)||(21694929-21695131)
chr4 (207-320)||(9030272-9030391)
chr4 (288-376)||(49735469-49735557)
chr4 (306-376)||(44145774-44145844)
chr4 (284-373)||(35543448-35543537)
chr4 (266-374)||(51074344-51074459)
chr4 (284-376)||(54935068-54935161)
chr4 (287-375)||(47846417-47846505)
chr4 (145-279)||(11089619-11089756)
chr4 (311-374)||(46007879-46007942)
chr4 (209-287)||(14539367-14539445)
chr4 (213-373)||(55510173-55510338)
chr4 (294-375)||(54576329-54576410)
chr4 (246-373)||(27735749-27735881)
chr4 (312-376)||(31348500-31348564)
chr4 (94-154)||(44156147-44156207)
chr4 (308-376)||(54320609-54320677)
chr4 (294-361)||(21694906-21694973)
chr4 (164-376)||(47433734-47433952)
chr4 (211-261)||(51075218-51075268)
chr4 (256-376)||(29798289-29798410)
chr4 (332-376)||(37711139-37711183)
chr4 (308-376)||(45741891-45741959)
chr4 (332-376)||(49735691-49735735)
chr4 (308-376)||(54935244-54935312)
chr4 (315-374)||(16400803-16400862)
chr4 (288-375)||(27735900-27735987)
chr4 (309-375)||(2247977-2248043)
chr4 (248-335)||(41227525-41227614)
chr4 (295-376)||(37711285-37711366)
chr4 (340-376)||(1968566-1968602)
chr4 (308-376)||(6938422-6938490)
chr4 (195-376)||(17938164-17938351)
chr4 (294-374)||(29993774-29993854)
chr4 (309-376)||(26166938-26167005)
chr4 (323-370)||(35565565-35565612)
chr4 (309-376)||(54320436-54320502)
chr4 (293-375)||(32192809-32192891)
chr4 (164-242)||(35543333-35543411)
chr4 (310-376)||(37761641-37761707)
chr4 (335-376)||(41174547-41174588)
chr4 (247-376)||(45132610-45132738)
chr4 (332-376)||(5730831-5730875)
chr4 (334-374)||(5731032-5731072)
chr4 (154-230)||(11842325-11842401)
chr4 (308-376)||(34995224-34995292)
chr4 (332-376)||(36151577-36151621)
chr4 (340-376)||(53260719-53260755)
[»] chr8 (42 HSPs)
chr8 (173-376)||(12022178-12022386)
chr8 (145-337)||(39449344-39449546)
chr8 (184-376)||(8815187-8815384)
chr8 (173-376)||(43732680-43732896)
chr8 (148-374)||(20472702-20472933)
chr8 (173-376)||(30365131-30365339)
chr8 (195-375)||(16024155-16024341)
chr8 (169-376)||(9933241-9933454)
chr8 (214-377)||(43826332-43826500)
chr8 (176-369)||(34196316-34196514)
chr8 (216-376)||(9434377-9434542)
chr8 (195-376)||(8671849-8672037)
chr8 (208-376)||(40633059-40633231)
chr8 (210-374)||(6453185-6453356)
chr8 (287-373)||(7394615-7394701)
chr8 (208-270)||(29937614-29937676)
chr8 (294-376)||(43732848-43732930)
chr8 (308-371)||(1281149-1281212)
chr8 (310-376)||(31543249-31543315)
chr8 (308-376)||(1027023-1027091)
chr8 (294-376)||(12022143-12022226)
chr8 (308-376)||(2248453-2248521)
chr8 (312-376)||(13404977-13405041)
chr8 (308-376)||(34634318-34634386)
chr8 (305-376)||(9718651-9718722)
chr8 (284-371)||(36308994-36309081)
chr8 (310-376)||(7503131-7503197)
chr8 (294-376)||(8815142-8815224)
chr8 (224-374)||(38198135-38198284)
chr8 (308-352)||(30581988-30582032)
chr8 (308-376)||(31543073-31543141)
chr8 (341-376)||(16652959-16652994)
chr8 (309-376)||(30365306-30365373)
chr8 (322-376)||(40632997-40633051)
chr8 (308-373)||(7979144-7979209)
chr8 (208-285)||(24243118-24243194)
chr8 (340-376)||(3726864-3726900)
chr8 (340-376)||(4247727-4247763)
chr8 (309-373)||(11575582-11575646)
chr8 (294-374)||(16024315-16024394)
chr8 (241-285)||(27487087-27487131)
chr8 (332-376)||(41103505-41103549)
[»] chr5 (43 HSPs)
chr5 (173-376)||(10204577-10204785)
chr5 (173-376)||(15986659-15986867)
chr5 (148-376)||(40305670-40305908)
chr5 (148-375)||(8551427-8551660)
chr5 (173-376)||(33744228-33744436)
chr5 (173-375)||(34980812-34981019)
chr5 (173-376)||(10043253-10043461)
chr5 (194-376)||(21580948-21581135)
chr5 (223-338)||(5688452-5688572)
chr5 (184-287)||(6382422-6382525)
chr5 (304-377)||(13634882-13634955)
chr5 (288-376)||(14245089-14245177)
chr5 (308-376)||(7544137-7544205)
chr5 (312-376)||(13634712-13634776)
chr5 (288-375)||(1657968-1658055)
chr5 (193-335)||(6597845-6597984)
chr5 (213-372)||(11436944-11437108)
chr5 (184-285)||(10043055-10043156)
chr5 (295-376)||(15858902-15858983)
chr5 (308-376)||(26414894-26414962)
chr5 (314-373)||(2550533-2550592)
chr5 (313-376)||(10476027-10476090)
chr5 (293-376)||(14245206-14245289)
chr5 (209-287)||(12036007-12036084)
chr5 (307-376)||(10476202-10476271)
chr5 (287-376)||(14684638-14684727)
chr5 (305-373)||(11756882-11756949)
chr5 (332-376)||(16938480-16938524)
chr5 (288-372)||(36363187-36363271)
chr5 (333-376)||(5688590-5688633)
chr5 (295-331)||(6382357-6382393)
chr5 (308-376)||(8502836-8502904)
chr5 (306-370)||(10043425-10043489)
chr5 (288-376)||(15986625-15986713)
chr5 (340-376)||(20147077-20147113)
chr5 (309-376)||(10204752-10204819)
chr5 (309-376)||(40815298-40815365)
chr5 (310-376)||(33744194-33744260)
chr5 (310-376)||(34980987-34981053)
chr5 (288-376)||(11437094-11437185)
chr5 (295-376)||(12035937-12036018)
chr5 (342-374)||(14681473-14681505)
chr5 (340-376)||(40305671-40305707)
[»] chr7 (43 HSPs)
chr7 (173-372)||(33519053-33519257)
chr7 (208-376)||(37925842-37926015)
chr7 (173-376)||(36267588-36267796)
chr7 (164-376)||(39646470-39646687)
chr7 (193-376)||(28074158-28074351)
chr7 (145-360)||(48013520-48013740)
chr7 (173-375)||(37620776-37620983)
chr7 (178-374)||(35421967-35422168)
chr7 (173-374)||(31364080-31364285)
chr7 (168-374)||(21857350-21857560)
chr7 (173-376)||(48881593-48881792)
chr7 (230-376)||(12670928-12671079)
chr7 (210-375)||(16833684-16833867)
chr7 (202-376)||(8122145-8122328)
chr7 (148-286)||(23116269-23116408)
chr7 (212-321)||(3215934-3216048)
chr7 (263-376)||(12682854-12682972)
chr7 (195-348)||(48015239-48015394)
chr7 (193-331)||(3143526-3143673)
chr7 (308-376)||(39856040-39856108)
chr7 (294-376)||(28074104-28074186)
chr7 (295-376)||(48881559-48881640)
chr7 (177-273)||(30592292-30592388)
chr7 (308-376)||(36267554-36267622)
chr7 (308-376)||(31571645-31571713)
chr7 (284-376)||(47390856-47390948)
chr7 (305-376)||(1051670-1051741)
chr7 (309-376)||(33519224-33519291)
chr7 (184-287)||(2087785-2087892)
chr7 (284-374)||(18795746-18795835)
chr7 (246-374)||(33655216-33655349)
chr7 (284-376)||(13771097-13771189)
chr7 (309-376)||(4833532-4833599)
chr7 (309-376)||(30592254-30592321)
chr7 (293-376)||(40196533-40196616)
chr7 (302-376)||(41496958-41497032)
chr7 (295-376)||(13770949-13771030)
chr7 (146-287)||(17852966-17853106)
chr7 (308-376)||(4835480-4835548)
chr7 (304-376)||(18231757-18231829)
chr7 (333-376)||(25887193-25887236)
chr7 (297-364)||(48147404-48147471)
chr7 (311-376)||(40282198-40282263)
[»] scaffold0095 (1 HSPs)
scaffold0095 (145-337)||(8187-8390)
[»] chr2 (47 HSPs)
chr2 (194-376)||(31061360-31061547)
chr2 (193-376)||(45257308-45257496)
chr2 (184-376)||(42296349-42296546)
chr2 (208-343)||(15085770-15085911)
chr2 (215-370)||(31928121-31928286)
chr2 (215-369)||(33265615-33265773)
chr2 (212-375)||(3094427-3094595)
chr2 (194-376)||(1052811-1053000)
chr2 (211-376)||(2381060-2381230)
chr2 (208-376)||(34187576-34187751)
chr2 (196-328)||(45098218-45098355)
chr2 (195-328)||(35325316-35325456)
chr2 (255-376)||(1270394-1270521)
chr2 (263-376)||(17333936-17334055)
chr2 (169-281)||(36052118-36052230)
chr2 (208-285)||(8554369-8554446)
chr2 (254-326)||(22356016-22356093)
chr2 (181-286)||(9313079-9313188)
chr2 (308-376)||(22356179-22356247)
chr2 (288-376)||(23748250-23748338)
chr2 (308-376)||(36347716-36347784)
chr2 (246-375)||(16713494-16713628)
chr2 (211-320)||(21502088-21502204)
chr2 (174-276)||(42813726-42813828)
chr2 (311-376)||(35736365-35736430)
chr2 (312-376)||(35736176-35736240)
chr2 (253-376)||(41778774-41778902)
chr2 (247-368)||(886927-887051)
chr2 (246-376)||(15224802-15224937)
chr2 (294-376)||(42813781-42813863)
chr2 (332-376)||(17379847-17379891)
chr2 (308-375)||(36046377-36046443)
chr2 (264-337)||(23739882-23739960)
chr2 (309-375)||(41841684-41841750)
chr2 (308-376)||(887285-887352)
chr2 (294-338)||(33265767-33265811)
chr2 (283-338)||(14196819-14196874)
chr2 (308-374)||(31795772-31795838)
chr2 (173-287)||(31795804-31795918)
chr2 (313-373)||(2380996-2381057)
chr2 (310-375)||(8426881-8426946)
chr2 (343-376)||(17380051-17380084)
chr2 (308-376)||(9631735-9631803)
chr2 (175-231)||(14187111-14187167)
chr2 (212-244)||(22356141-22356173)
chr2 (308-376)||(36347542-36347610)
chr2 (308-376)||(45257482-45257550)
[»] chr1 (43 HSPs)
chr1 (173-376)||(1085524-1085733)
chr1 (150-376)||(33643269-33643499)
chr1 (193-376)||(35927815-35928001)
chr1 (173-374)||(40709327-40709532)
chr1 (174-328)||(25268313-25268472)
chr1 (145-326)||(47071102-47071288)
chr1 (215-347)||(51303461-51303600)
chr1 (169-376)||(525133-525343)
chr1 (193-338)||(2506578-2506728)
chr1 (294-376)||(51303385-51303467)
chr1 (147-334)||(1344592-1344783)
chr1 (173-270)||(35512909-35513006)
chr1 (208-369)||(13386989-13387163)
chr1 (225-376)||(17622537-17622694)
chr1 (284-369)||(23536839-23536924)
chr1 (208-376)||(20607224-20607390)
chr1 (310-373)||(35512974-35513037)
chr1 (208-338)||(40287325-40287463)
chr1 (308-376)||(12234011-12234079)
chr1 (288-376)||(38509895-38509983)
chr1 (308-370)||(2859107-2859169)
chr1 (256-376)||(30010333-30010458)
chr1 (223-331)||(52707691-52707803)
chr1 (305-376)||(41498405-41498476)
chr1 (308-374)||(7444481-7444547)
chr1 (230-326)||(50079476-50079577)
chr1 (332-376)||(26324015-26324059)
chr1 (308-376)||(35349637-35349705)
chr1 (308-376)||(40094934-40095002)
chr1 (308-375)||(12234185-12234252)
chr1 (308-374)||(38510069-38510135)
chr1 (306-376)||(40709293-40709363)
chr1 (332-376)||(20607416-20607460)
chr1 (308-376)||(30010507-30010575)
chr1 (308-376)||(32951493-32951561)
chr1 (309-376)||(2858933-2859000)
chr1 (313-373)||(35512638-35512694)
chr1 (342-376)||(26941042-26941076)
chr1 (308-376)||(1085490-1085559)
chr1 (257-373)||(51597672-51597793)
chr1 (334-374)||(20576136-20576176)
chr1 (227-287)||(44210994-44211054)
chr1 (313-373)||(49946768-49946828)
[»] chr6 (37 HSPs)
chr6 (208-376)||(15353365-15353537)
chr6 (208-376)||(15323226-15323399)
chr6 (194-376)||(9051590-9051775)
chr6 (263-376)||(23090996-23091114)
chr6 (173-376)||(10293251-10293457)
chr6 (175-376)||(31798919-31799128)
chr6 (212-337)||(26318345-26318475)
chr6 (208-376)||(4097305-4097479)
chr6 (246-374)||(4097620-4097754)
chr6 (184-287)||(3841180-3841284)
chr6 (208-278)||(15373669-15373739)
chr6 (193-287)||(25468454-25468548)
chr6 (173-376)||(10818230-10818425)
chr6 (173-278)||(34176606-34176711)
chr6 (308-376)||(14515474-14515542)
chr6 (293-332)||(15373737-15373776)
chr6 (310-376)||(30487307-30487373)
chr6 (293-331)||(34177060-34177098)
chr6 (283-376)||(10818366-10818459)
chr6 (308-376)||(9721139-9721207)
chr6 (246-286)||(28477076-28477116)
chr6 (246-286)||(29692974-29693014)
chr6 (283-326)||(5287471-5287514)
chr6 (308-374)||(9719034-9719100)
chr6 (310-376)||(12811157-12811223)
chr6 (308-374)||(19278213-19278278)
chr6 (308-369)||(23091133-23091195)
chr6 (308-374)||(30487480-30487546)
chr6 (288-376)||(665842-665929)
chr6 (280-376)||(9719178-9719273)
chr6 (304-374)||(5585304-5585375)
chr6 (342-376)||(4097236-4097270)
chr6 (284-374)||(30850063-30850153)
chr6 (295-376)||(14515633-14515714)
chr6 (313-374)||(31849113-31849174)
chr6 (342-374)||(7775959-7775991)
chr6 (306-362)||(34176586-34176642)
[»] chr3 (41 HSPs)
chr3 (149-342)||(40858600-40858798)
chr3 (148-376)||(41414079-41414313)
chr3 (175-371)||(16884010-16884209)
chr3 (173-338)||(34641031-34641199)
chr3 (193-371)||(10943669-10943852)
chr3 (193-373)||(17474261-17474446)
chr3 (148-338)||(48683651-48683848)
chr3 (196-374)||(21090129-21090312)
chr3 (215-376)||(44412362-44412528)
chr3 (173-372)||(26135807-26136006)
chr3 (193-376)||(24253722-24253911)
chr3 (164-375)||(42772046-42772250)
chr3 (177-365)||(18086019-18086218)
chr3 (174-336)||(8432297-8432462)
chr3 (294-375)||(44412522-44412603)
chr3 (215-338)||(46978466-46978594)
chr3 (223-376)||(27197734-27197892)
chr3 (195-338)||(42699669-42699817)
chr3 (294-376)||(34641151-34641233)
chr3 (209-312)||(36727242-36727349)
chr3 (284-376)||(24560218-24560310)
chr3 (308-376)||(28582684-28582752)
chr3 (141-371)||(54985696-54985943)
chr3 (297-376)||(5961933-5962011)
chr3 (309-376)||(24560393-24560460)
chr3 (294-376)||(24253883-24253965)
chr3 (208-269)||(55428492-55428553)
chr3 (308-373)||(55428554-55428619)
chr3 (284-376)||(220548-220640)
chr3 (295-375)||(26135959-26136039)
chr3 (144-232)||(37102155-37102243)
chr3 (308-376)||(41110496-41110564)
chr3 (308-372)||(52473920-52473984)
chr3 (342-376)||(37102348-37102382)
chr3 (310-371)||(27541937-27541998)
chr3 (148-376)||(30200098-30200338)
chr3 (253-373)||(46204890-46205015)
chr3 (339-376)||(54574562-54574599)
chr3 (332-376)||(18654601-18654645)
chr3 (334-374)||(18654802-18654842)
chr3 (308-376)||(21773783-21773851)
[»] scaffold0026 (2 HSPs)
scaffold0026 (208-376)||(1467-1641)
scaffold0026 (293-374)||(1175-1256)
[»] scaffold0119 (2 HSPs)
scaffold0119 (193-376)||(37384-37572)
scaffold0119 (255-376)||(30716-30843)
[»] scaffold0071 (1 HSPs)
scaffold0071 (143-342)||(52921-53122)
[»] scaffold0007 (2 HSPs)
scaffold0007 (173-287)||(242311-242425)
scaffold0007 (294-373)||(242377-242456)
[»] scaffold0012 (2 HSPs)
scaffold0012 (193-338)||(184640-184796)
scaffold0012 (310-373)||(184784-184847)
[»] scaffold1414 (1 HSPs)
scaffold1414 (211-322)||(355-473)
[»] scaffold0067 (1 HSPs)
scaffold0067 (284-376)||(39341-39433)
[»] scaffold0240 (2 HSPs)
scaffold0240 (193-282)||(17640-17729)
scaffold0240 (309-376)||(17716-17781)
[»] scaffold0198 (1 HSPs)
scaffold0198 (309-374)||(3150-3215)
[»] scaffold0096 (1 HSPs)
scaffold0096 (309-376)||(6585-6652)
[»] scaffold0262 (1 HSPs)
scaffold0262 (304-376)||(16297-16369)
[»] scaffold0006 (1 HSPs)
scaffold0006 (225-273)||(81498-81546)


Alignment Details
Target: chr4 (Bit Score: 231; Significance: 1e-127; HSPs: 65)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 13 - 271
Target Start/End: Complemental strand, 44146100 - 44145842
Alignment:
Q  13 aaaataagtcttaagctacgagaattcacaagaaagttggtaagatcaatagaatgtggaatatgaatgaaaagtagatacatgatagtactacttttaa 112  Q
    |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  44146100 aaaagaagtcttaagctaagagaattcacaagaaagttggtaagatcaatagaatgtggaatatgaatgaaaagtagatacatgatagtactacctttaa 44146001  T
Q  113 ttacttatattaattctttttgacttactttattaagggtgtgtttgggaagagggtttaggaggggagggcttacattccttttttaatttaaagacat 212  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44146000 ttacttatattaattctttttgacttactttattaagggtgtatttggaaagagggtttaggaggggagggcttacattccttttttaatttaaagacat 44145901  T
Q  213 tataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttc 271  Q
    |||||||||||||||||||||||||||||||||||| || |||||||||||||||||||    
T  44145900 tataaaatgatttttaaaaaattgaattaacagcattataaatgatcatgtaatacttc 44145842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 145 - 376
Target Start/End: Original strand, 17182490 - 17182728
Alignment:
Q  145 ttaagggtgtgtttgggaagagggtttaggaggggagggcttacattccttttttaatttaaagacattataaaatgattttta--aaaaattgaattaa 242  Q
    |||| |||||||||||  ||||| |||||||||||| |  |||| || ||||||||| |||  ||| ||||||||||||||||   ||||||||||||||    
T  17182490 ttaaaggtgtgtttggatagaggttttaggaggggaagatttacttttcttttttaaattattgacgttataaaatgattttttgcaaaaattgaattaa 17182589  T
Q  243 cagcatgatcaatgatcatgtaatacttcaaaaacacttaattta-----aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcc 337  Q
    ||  ||||| ||||||||| |||||||||||||||||||||||||     |||| | ||||||| |||||||||||||||||||||||||| || |||||    
T  17182590 caatatgataaatgatcatataatacttcaaaaacacttaatttattttaaaaaaatattttaccttgttcgtaatttaaaaaataaaagtaagtcctcc 17182689  T
Q  338 catcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    | ||| ||||||||  |||||||||||||||||||||||    
T  17182690 cttcctttcccctcataaaccctcaatccaaacacaccc 17182728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 148 - 338
Target Start/End: Complemental strand, 43961644 - 43961449
Alignment:
Q  148 agggtgtgtttgggaagagggtttaggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagca 247  Q
    |||||||||||||   ||||| ||| ||||||||||||||  || ||||||||| |||   |||||||||||||||||||| |||||||||||| || ||    
T  43961644 agggtgtgtttggatggagggattatgaggggagggcttatttttcttttttaaattatgaacattataaaatgatttttagaaaattgaattatcaaca 43961545  T
Q  248 tgatcaatgatcatgtaatacttcaaaaacacttaa-----tttaaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctccc 338  Q
    |||| ||||||||| |||||||||||||||||||||     |||||||| |||||||||||||||| |||||||||||||||||||||||||||||    
T  43961544 tgataaatgatcatataatacttcaaaaacacttaatttattttaaaaaaacattttacattgttcataatttaaaaaataaaagtgagccctccc 43961449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 146 - 375
Target Start/End: Complemental strand, 55080815 - 55080581
Alignment:
Q  146 taagggtgtgtttgggaagagggtttaggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacag 245  Q
    |||||||||||||||   |||||||||||| |||||| ||||| || ||||||||| |||   |||||||||||| ||||||| |||||| ||||||||     
T  55080815 taagggtgtgtttggatggagggtttaggatgggaggacttacttttcttttttaaattacgaacattataaaataatttttagaaaatttaattaacaa 55080716  T
Q  246 catgatcaatgatcatgtaatacttcaaaaacacttaa-----tttaaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccat 340  Q
    |||||| |||||||||  ||||||||||||||||||||     ||| |||| |||||||||||||||||||||||| ||||||||| ||| || || | |    
T  55080715 catgataaatgatcataaaatacttcaaaaacacttaacttattttgaaaaaacattttacattgttcgtaatttacaaaataaaaatgaaccatctcct 55080616  T
Q  341 cccttcccctccaaaaccctcaatccaaacacacc 375  Q
    | ||||| |||| ||||||||||||||||||||||    
T  55080615 ctcttcctctcctaaaccctcaatccaaacacacc 55080581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 151 - 376
Target Start/End: Complemental strand, 22186950 - 22186720
Alignment:
Q  151 gtgtgtttgggaagagggtttaggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatga 250  Q
    ||||||||||   |||||||||  |||||||| || || || ||||||||| |||  ||||||||||||||||||||| ||||||||||||||| |||||    
T  22186950 gtgtgtttggatggagggtttaaaaggggaggactcacttttcttttttaaattacggacattataaaatgatttttagaaaattgaattaacaacatga 22186851  T
Q  251 tcaatgatcatgtaatacttcaaaaacac-----ttaatttaaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccatccctt 345  Q
    | |||||| || |||||||||||||||||     ||| |||||||| ||||||||| ||||| |||||||||||| ||||||||| | || || ||||||    
T  22186850 taaatgattatataatacttcaaaaacactttatttattttaaaaaaacattttacgttgtttgtaatttaaaaattaaaagtgaactctgccctccctt 22186751  T
Q  346 cccctccaaaaccctcaatccaaacacaccc 376  Q
    ||| ||| |||||||||||||||| ||||||    
T  22186750 cccttcctaaaccctcaatccaaatacaccc 22186720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 173 - 375
Target Start/End: Original strand, 47846090 - 47846298
Alignment:
Q  173 ggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttca 272  Q
    ||||||||| | |||| || ||||||||| ||   ||||||||||||| ||||||| ||||||||||||| | |||||| ||| ||||| ||||||||||    
T  47846090 ggaggggagagtttacttttcttttttaaattctggacattataaaataatttttacaaaattgaattaagaacatgataaataatcatataatacttca 47846189  T
Q  273 aaaacacttaattta------aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatcc 366  Q
    |||||||||||||||      |||| ||| |||||||||||| ||||||||||||||||||| | ||||||||||||||| ||||  |||||||||||||    
T  47846190 aaaacacttaatttattttaaaaaaaacactttacattgttcataatttaaaaaataaaagtaaaccctcccatcccttctcctcttaaaccctcaatcc 47846289  T
Q  367 aaacacacc 375  Q
    |||||||||    
T  47846290 aaacacacc 47846298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 148 - 376
Target Start/End: Complemental strand, 56135965 - 56135750
Alignment:
Q  148 agggtgtgtttgggaagagggtttaggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagca 247  Q
    |||||||||||||   ||||||||||||||||||||||||| || ||||||||| ||||||               ||||| |||||||||||||||       
T  56135965 agggtgtgtttggatggagggtttaggaggggagggcttacttttcttttttaaattaaag---------------ttttagaaaattgaattaaca--- 56135884  T
Q  248 tgatcaatgatcatgtaatacttcaaaaacacttaattta-----aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccatcc 342  Q
    |||| ||||||||| |||||||||||||||||||||||||     |||| |||||||||||||||||||||||||||||||||| ||| ||||||| |||    
T  56135883 tgataaatgatcatataatacttcaaaaacacttaatttattttaaaaaaacattttacattgttcgtaatttaaaaaataaaaatgaaccctcccctcc 56135784  T
Q  343 cttcccctccaaaaccctcaatccaaacacaccc 376  Q
    |||||||||| |||||||||||||||||||||||    
T  56135783 cttcccctcctaaaccctcaatccaaacacaccc 56135750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 173 - 376
Target Start/End: Original strand, 7977530 - 7977740
Alignment:
Q  173 ggaggggagggcttacattcctttttt-aatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttc 271  Q
    |||||||||||||||| || ||||||| || |||   |||||||||||| || |||  ||||||||||||||| |||||| ||||||||| |||||||||    
T  7977530 ggaggggagggcttacttttctttttttaaattacgaacattataaaataatattttgaaaattgaattaacaacatgataaatgatcatataatacttc 7977629  T
Q  272 aaaaacacttaattta------aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatc 365  Q
    ||||||| ||||||||      |||| |||||||||||| ||||||||||||||||||||| ||| ||||||| ||| ||||||||  ||||||||||||    
T  7977630 aaaaacaattaatttactttaaaaaaaacattttacattcttcgtaatttaaaaaataaaattgaaccctcccctcctttcccctcataaaccctcaatc 7977729  T
Q  366 caaacacaccc 376  Q
    |||||||||||    
T  7977730 caaacacaccc 7977740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 173 - 376
Target Start/End: Complemental strand, 37761673 - 37761466
Alignment:
Q  173 ggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttca 272  Q
    |||||||||||||| | || ||||||||| |||  |||||||| |||||||||||| ||||||||||||||| |||||| |||||| || ||| ||||||    
T  37761673 ggaggggagggcttccttttcttttttaaattatggacattatgaaatgatttttagaaaattgaattaacaacatgataaatgattatataacacttca 37761574  T
Q  273 aaaacacttaattta----aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaa 368  Q
    |||||||||||||||    |||| | ||||||  |||||||||||||||||| ||||||||| | || || ||| ||| ||||| |||| ||||||||||    
T  37761573 aaaacacttaatttattctaaaaaatattttatgttgttcgtaatttaaaaattaaaagtgaactctaccctcctttctcctcctaaactctcaatccaa 37761474  T
Q  369 acacaccc 376  Q
    ||||||||    
T  37761473 acacaccc 37761466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 173 - 376
Target Start/End: Original strand, 54576362 - 54576572
Alignment:
Q  173 ggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttca 272  Q
    |||||||||||||||| || ||||||||  |||  |||||||||||||||||| || ||||||||||||||| | |||| |||||| || ||||||||||    
T  54576362 ggaggggagggcttacttttcttttttagattacggacattataaaatgatttatagaaaattgaattaacaacgtgataaatgattatataatacttca 54576461  T
Q  273 aaaacacttaattt-------aaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatc 365  Q
    |||||| |||||||       ||||| ||||||||| |||||||||||||||||| ||||||||| | || |  |||||||| |||  ||||||| ||||    
T  54576462 aaaacatttaatttatttaaaaaaaaaacattttacgttgttcgtaatttaaaaattaaaagtgaactcttctctcccttcctctcttaaacccttaatc 54576561  T
Q  366 caaacacaccc 376  Q
    |||||||||||    
T  54576562 caaacacaccc 54576572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 193 - 385
Target Start/End: Original strand, 29993826 - 29994022
Alignment:
Q  193 cttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaa-----ttta 287  Q
    ||||||||| |||  |||| |||||||||||||||| ||||||||||||||| ||||||  ||||| || |||||||||||||| ||||||     ||||    
T  29993826 cttttttaaattacggacactataaaatgatttttagaaaattgaattaacaacatgattgatgatgatataatacttcaaaaatacttaatctatttta 29993925  T
Q  288 aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccccttaatctc 385  Q
    |||| || ||||||||||||||||||||||||| ||||||||| ||||||| ||| || |||||| ||| ||| |||| |||| || |||||||||||    
T  29993926 aaaaaactttttacattgttcgtaatttaaaaagtaaaagtgaaccctcccctccatttccctcctaaatccttaatctaaactca-cccttaatctc 29994022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 193 - 338
Target Start/End: Original strand, 4437480 - 4437629
Alignment:
Q  193 cttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaattta----a 288  Q
    ||||||||| |||  || |||||||||||||||||||||||||||||||||| |||||| | ||||||| ||||||||||||||||||| |||||         
T  4437480 cttttttaaattatggatattataaaatgatttttaaaaaattgaattaacaacatgataattgatcatataatacttcaaaaacacttgatttattttt 4437579  T
Q  289 aaagacattttacattgttcgtaatttaaaaaataaaagtgagccctccc 338  Q
    ||| |||||||||||||||  ||||||||||||||||| ||| |||||||    
T  4437580 aaaaacattttacattgtttttaatttaaaaaataaaaatgaaccctccc 4437629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 193 - 376
Target Start/End: Complemental strand, 5825085 - 5824902
Alignment:
Q  193 cttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaatttaaaaag 292  Q
    ||||||| | ||| |||||||||||||||||||||| ||||||||||||||| |||||| ||||||||| |||    || |||    ||| |||||| |     
T  5825085 cttttttgaattacagacattataaaatgatttttagaaaattgaattaacaacatgataaatgatcatataaccaatccaaacattttattttaaacaa 5824986  T
Q  293 acattttacattgttcgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    |||||||||||| ||||||||||||||||||||| ||||| ||  | | | ||||| |||||||||||||||||||||||||||    
T  5824985 acattttacatttttcgtaatttaaaaaataaaaatgagcactaaccttcattcccttccaaaaccctcaatccaaacacaccc 5824902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 194 - 318
Target Start/End: Original strand, 54001162 - 54001289
Alignment:
Q  194 ttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacac------ttaattta 287  Q
    |||||||| |||  ||||||||||||| |||||||||||||||||||||   |||||| ||||||||| |||||||||||||||||      ||| ||||    
T  54001162 ttttttaaattacggacattataaaataatttttaaaaaattgaattaa---catgataaatgatcatataatacttcaaaaacacttttatttatttta 54001258  T
Q  288 aaaagacattttacattgttcgtaatttaaa 318  Q
    ||||||||||||||||||||||| |||||||    
T  54001259 aaaagacattttacattgttcgtgatttaaa 54001289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 184 - 375
Target Start/End: Complemental strand, 34995247 - 34995052
Alignment:
Q  184 cttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaa 283  Q
    ||||| || ||||||||| |||  || ||||| |||||||||||| |||||||||||||   |||||| ||| ||| | |||||||||||||||||||||    
T  34995247 cttacttttcttttttaaattacggatattatcaaatgatttttagaaaattgaattaaa--catgataaataatcttataatacttcaaaaacacttaa 34995150  T
Q  284 tttaa-----aaagacattttacattgttcgtaatttaaaaaataaaagtgag-ccctcccatcccttcccctccaaaaccctcaatccaaacacacc 375  Q
    ||||      ||| |||||| |||||||||||||||||||||||||||||| | |  |||| |||||||| |||  || |||||||| ||||||||||    
T  34995149 tttattttagaaaaacatttcacattgttcgtaatttaaaaaataaaagtgtgtcattcccttcccttcctctctcaacccctcaattcaaacacacc 34995052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 13 - 94
Target Start/End: Original strand, 44155971 - 44156052
Alignment:
Q  13 aaaataagtcttaagctacgagaattcacaagaaagttggtaagatcaatagaatgtggaatatgaatgaaaagtagataca 94  Q
    |||| |||||||||||||||||||||||||||||||||||||| |||| || |||| ||||||||||| |||||||||||||    
T  44155971 aaaagaagtcttaagctacgagaattcacaagaaagttggtaaaatcactaaaatggggaatatgaattaaaagtagataca 44156052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 194 - 376
Target Start/End: Complemental strand, 51329983 - 51329797
Alignment:
Q  194 ttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaattta-----a 288  Q
    |||||||| |||  || |||||||||| |||| || |||||||||||||||  ||||| |||||| || |||||||||||||| ||||||||||     |    
T  51329983 ttttttaaattagggatattataaaataatttatagaaaattgaattaacaaaatgataaatgattatataatacttcaaaaa-acttaatttattttaa 51329885  T
Q  289 aaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    ||| |||||||   |||||||||||||||||| ||||| ||| | ||||  |  |||||||||| |||| ||||||||||||||||||    
T  51329884 aaaaacattttgtgttgttcgtaatttaaaaattaaaattgaactctcctctttcttcccctcctaaactctcaatccaaacacaccc 51329797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 177 - 376
Target Start/End: Original strand, 21694929 - 21695131
Alignment:
Q  177 gggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaa 276  Q
    |||||||||||| || ||||||||| |||  |||| ||||||||| ||||||| |||||||| |||||  ||||| ||||||||| |||||||||||  |    
T  21694929 gggagggcttacttttcttttttaaattacggacactataaaatggtttttaataaattgaaataacaaaatgat-aatgatcatataatacttcaatca 21695027  T
Q  277 cacttaattt----aaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacac 372  Q
    ||||||||||    ||||| | |  ||| ||||| | |||||||||| | |||||| | ||||||  | ||||||||||  |||||| ||||||||||||    
T  21695028 cacttaatttattaaaaaaaataaattatattgtccataatttaaaatagaaaagtaaaccctccgcttccttcccctcataaacccccaatccaaacac 21695127  T
Q  373 accc 376  Q
    ||||    
T  21695128 accc 21695131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 207 - 320
Target Start/End: Complemental strand, 9030391 - 9030272
Alignment:
Q  207 agacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaattta------aaaagacatttta 300  Q
    |||||||||||||||||||||| |||||| |||||| |  ||||| |||||| || |||||||| ||||||||||||||||      |||| ||||||||    
T  9030391 agacattataaaatgatttttagaaaatttaattaataaaatgataaatgattatataatactttaaaaacacttaatttattgtttaaaaaacatttta 9030292  T
Q  301 cattgttcgtaatttaaaaa 320  Q
    | ||||||||||||||||||    
T  9030291 cgttgttcgtaatttaaaaa 9030272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 288 - 376
Target Start/End: Complemental strand, 49735557 - 49735469
Alignment:
Q  288 aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    ||||||||||| |  |||| |||||||||||||  |||||||| ||||||| ||||||||||||| |||||||||||||||||||||||    
T  49735557 aaaagacatttcatgttgtccgtaatttaaaaatgaaaagtgaaccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 49735469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 306 - 376
Target Start/End: Complemental strand, 44145844 - 44145774
Alignment:
Q  306 ttcgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    |||||||||||||||||||||||||| |||||| ||||||||||||| ||||| | |||||||||||||||    
T  44145844 ttcgtaatttaaaaaataaaagtgagtcctcccctcccttcccctcctaaaccttgaatccaaacacaccc 44145774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 284 - 373
Target Start/End: Original strand, 35543448 - 35543537
Alignment:
Q  284 tttaaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacaca 373  Q
    |||||||| | |||||||  |||||||||||| |||||||||||||||| ||||||||  ||||||||  ||||||||||||||||||||    
T  35543448 tttaaaaaaatattttactatgttcgtaattttaaaaataaaagtgagctctcccatcatttcccctcataaaccctcaatccaaacaca 35543537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 266 - 374
Target Start/End: Complemental strand, 51074459 - 51074344
Alignment:
Q  266 tacttcaaaaacacttaattta-------aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaacc 358  Q
    ||||||||||||||||||||||       |||| ||| |||||| ||||| ||||||||||||||||||||||||||||| ||| ||| ||||| ||| |    
T  51074459 tacttcaaaaacacttaatttattaaaaaaaaaaacactttacaatgttcataatttaaaaaataaaagtgagccctcccgtcctttctcctcctaaatc 51074360  T
Q  359 ctcaatccaaacacac 374  Q
    || || ||||||||||    
T  51074359 cttaacccaaacacac 51074344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 284 - 376
Target Start/End: Complemental strand, 54935161 - 54935068
Alignment:
Q  284 tttaaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctccca-tcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    |||| ||| |||| ||| || ||||||||||||||||| |||||| | |||||||  ||||||||||||| |||||||||||||||||||||||    
T  54935161 tttagaaaaacatgttatatagttcgtaatttaaaaaagaaaagtaaaccctccccctcccttcccctcctaaaccctcaatccaaacacaccc 54935068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 287 - 375
Target Start/End: Original strand, 47846417 - 47846505
Alignment:
Q  287 aaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacacc 375  Q
    ||||| ||| |||||||||||| ||||||||||||||||||| | || |||  ||||||| ||||  ||||||||||||||||||||||    
T  47846417 aaaaaaacactttacattgttcataatttaaaaaataaaagtaaaccttcctttcccttctcctcttaaaccctcaatccaaacacacc 47846505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 145 - 279
Target Start/End: Complemental strand, 11089756 - 11089619
Alignment:
Q  145 ttaagggtgtgtttgggaagagggtttaggaggggagg---gcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaatta 241  Q
    ||||||||||||||||   |||| ||||| |||||| |   | ||||||| ||||||||| |||  ||| |||||||||  |||||| ||||||||||||    
T  11089756 ttaagggtgtgtttggattgaggatttagaaggggaagatggtttacatttcttttttaaattacggactttataaaatattttttagaaaattgaatta 11089657  T
Q  242 acagcatgatcaatgatcatgtaatacttcaaaaacac 279  Q
    ||| ||| || ||||||||| || ||||||||||||||    
T  11089656 acaacatcataaatgatcatatattacttcaaaaacac 11089619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 311 - 374
Target Start/End: Original strand, 46007879 - 46007942
Alignment:
Q  311 aatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacac 374  Q
    ||||||||||| |||||| | ||||||| ||||||||||||| |||||||||||||||||||||    
T  46007879 aatttaaaaaagaaaagtaaaccctcccctcccttcccctcctaaaccctcaatccaaacacac 46007942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 209 - 287
Target Start/End: Complemental strand, 14539445 - 14539367
Alignment:
Q  209 acattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaattta 287  Q
    ||||||||||||| || ||| |||||| |||||| | ||| || ||||||||| |||||||||||||||||||||||||    
T  14539445 acattataaaatgtttgttagaaaattaaattaagaacataataaatgatcatataatacttcaaaaacacttaattta 14539367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 213 - 373
Target Start/End: Complemental strand, 55510338 - 55510173
Alignment:
Q  213 tataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaa-----tttaaaaagacattttacattgtt 307  Q
    |||||||| ||||| ||||||||||| ||||| |||||| ||||||||| ||||||||||   ||||||||     |||||||| ||||||||||||||     
T  55510338 tataaaat-attttaaaaaaattgaaataacaacatgatgaatgatcatataatacttcagtcacacttaatttattttaaaaaaacattttacattgtc 55510240  T
Q  308 cgtaatttaaaaaataaaagtgagccctcccat-cccttcccctccaaaaccctcaatccaaacaca 373  Q
      ||| |||||||  |||||| || |||||| | ||||||||  || || |||||||||||||||||    
T  55510239 tttaaattaaaaatgaaaagtaagtcctcccctccccttccctccctaacccctcaatccaaacaca 55510173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 294 - 375
Target Start/End: Complemental strand, 54576410 - 54576329
Alignment:
Q  294 cattttacattgttcgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacacc 375  Q
    ||||||| | ||| |||||| ||||||| |||||| ||||||||| ||||||||||| | |||||||| |||||||||||||    
T  54576410 cattttataatgtccgtaatctaaaaaagaaaagtaagccctcccctcccttccccttctaaaccctccatccaaacacacc 54576329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 246 - 373
Target Start/End: Complemental strand, 27735881 - 27735749
Alignment:
Q  246 catgatcaatgatcatgtaatacttcaaaaacacttaattta-----aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccat 340  Q
    |||||| ||||||||| |||||||||||  ||||||||||||     |||| |||| ||| || || |||||||||||||  |||| | | ||||| | |    
T  27735881 catgataaatgatcatataatacttcaatcacacttaatttattttaaaaaaacatgttatatagtccgtaatttaaaaatgaaaattaaaccctctctt 27735782  T
Q  341 cccttcccctccaaaaccctcaatccaaacaca 373  Q
    |||||||||||| |||||||| |||||||||||    
T  27735781 cccttcccctcctaaaccctcgatccaaacaca 27735749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 312 - 376
Target Start/End: Original strand, 31348500 - 31348564
Alignment:
Q  312 atttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    |||||||||| |||||| | ||||||| ||||||||||||| |||| ||||||||||||||||||    
T  31348500 atttaaaaaagaaaagtaaaccctcccctcccttcccctcctaaactctcaatccaaacacaccc 31348564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 94 - 154
Target Start/End: Original strand, 44156147 - 44156207
Alignment:
Q  94 atgatagtactacttttaattacttatattaattctttttgacttactttattaagggtgt 154  Q
    ||||||||| ||| |||||||||||||||||||||| ||||||||| ||||||||| ||||    
T  44156147 atgatagtattacctttaattacttatattaattctctttgacttattttattaagagtgt 44156207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 308 - 376
Target Start/End: Original strand, 54320609 - 54320677
Alignment:
Q  308 cgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    ||||||||||||| |||||   | ||||||| ||||||||||||| |||||||||||||||||||||||    
T  54320609 cgtaatttaaaaattaaaatcaaaccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 54320677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 294 - 361
Target Start/End: Complemental strand, 21694973 - 21694906
Alignment:
Q  294 cattttacattgttcgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctc 361  Q
    ||||||| | ||| |||||||||||||| |||||| ||||||||| ||||||||||||| ||||||||    
T  21694973 cattttatagtgtccgtaatttaaaaaagaaaagtaagccctcccgtcccttcccctcctaaaccctc 21694906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 164 - 376
Target Start/End: Original strand, 47433734 - 47433952
Alignment:
Q  164 gagggtttaggagggga-gggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatg 262  Q
    ||||||||||||||||| ||| |||  || | ||||||| |||  ||||||||  |||| ||||||||||||| || ||| | ||| || || ||||||     
T  47433734 gagggtttaggaggggaagggtttaattttcgtttttaaattatggacattatggaatgttttttaaaaaattaaaataataacat-ataaacgatcata 47433832  T
Q  263 taatacttcaaaaacacttaattta-----aaaagacattttac-attgttcgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaa 356  Q
    |||||||||||  ||||||||||||     |||| |||| |||  || ||  ||||||||||||| |||||| | ||||||  ||||||||||||| |||    
T  47433833 taatacttcaatcacacttaatttattttaaaaaaacatgttattatagtctgtaatttaaaaaagaaaagtaaaccctcctctcccttcccctcctaaa 47433932  T
Q  357 ccctcaatccaaacacaccc 376  Q
    || |||| ||||||||||||    
T  47433933 ccgtcaacccaaacacaccc 47433952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 211 - 261
Target Start/End: Complemental strand, 51075268 - 51075218
Alignment:
Q  211 attataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcat 261  Q
    |||||||||| ||||||||||||||||||||||| |||||| |||||||||    
T  51075268 attataaaataatttttaaaaaattgaattaacaacatgataaatgatcat 51075218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 256 - 376
Target Start/End: Complemental strand, 29798410 - 29798289
Alignment:
Q  256 gatcatgtaatacttcaaaaacacttaatttaa-aaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaa 354  Q
    |||||| |||||||||||  |||||| |||||| ||| |||| ||| || ||  |||||||||||||||||||| | |  |||  || |||||||||| |    
T  29798410 gatcatataatacttcaatcacacttgatttaagaaaaacatgttatatagtctgtaatttaaaaaataaaagtaaactatcctctctcttcccctccta 29798311  T
Q  355 aaccctcaatccaaacacaccc 376  Q
    |||| |||||||||||||||||    
T  29798310 aaccatcaatccaaacacaccc 29798289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 332 - 376
Target Start/End: Complemental strand, 37711183 - 37711139
Alignment:
Q  332 ccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    ||||||| ||||||||||||| |||||||||||||||||||||||    
T  37711183 ccctcccttcccttcccctcctaaaccctcaatccaaacacaccc 37711139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 308 - 376
Target Start/End: Complemental strand, 45741959 - 45741891
Alignment:
Q  308 cgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    |||||||||||||| |||||| |  |||| ||| | ||||||||| |||||||||||||||||||||||    
T  45741959 cgtaatttaaaaaacaaaagtaaatcctcacattcattcccctcctaaaccctcaatccaaacacaccc 45741891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 332 - 376
Target Start/End: Original strand, 49735691 - 49735735
Alignment:
Q  332 ccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    ||||||| ||||||||||||| |||||||||||||||||||||||    
T  49735691 ccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 49735735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 308 - 376
Target Start/End: Original strand, 54935244 - 54935312
Alignment:
Q  308 cgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    |||||||||||||  |||| | | ||||||| ||||||||||||| |||||||| ||||||||||||||    
T  54935244 cgtaatttaaaaatgaaaaataaaccctcccctcccttcccctcctaaaccctccatccaaacacaccc 54935312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 315 - 374
Target Start/End: Complemental strand, 16400862 - 16400803
Alignment:
Q  315 taaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacac 374  Q
    ||||||||||||||||  |||||| ||||||| ||||| ||||||||||||||| |||||    
T  16400862 taaaaaataaaagtgaatcctcccctcccttctcctcctaaaccctcaatccaatcacac 16400803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 288 - 375
Target Start/End: Original strand, 27735900 - 27735987
Alignment:
Q  288 aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacacc 375  Q
    |||| |||||||| | ||| |||||||||||||  |||| ||| ||||  | ||||||||||||| |||||||| |||||||||||||    
T  27735900 aaaaaacattttatagtgtccgtaatttaaaaatgaaaaatgaaccctatcctcccttcccctcctaaaccctccatccaaacacacc 27735987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 309 - 375
Target Start/End: Original strand, 2247977 - 2248043
Alignment:
Q  309 gtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacacc 375  Q
    ||||||||||||| |||||| | | ||||| || |||| ||||| ||||||||||||||||||||||    
T  2247977 gtaatttaaaaaagaaaagtaaactctcccttcacttctcctcctaaaccctcaatccaaacacacc 2248043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 248 - 335
Target Start/End: Complemental strand, 41227614 - 41227525
Alignment:
Q  248 tgatcaatgatcatgtaatacttcaaaaacacttaattta--aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccct 335  Q
    |||| ||||||||| |||||||||||  |||||||||||   ||| ||||||||| ||||||| |||||||||||| | |||| ||||||    
T  41227614 tgataaatgatcatataatacttcaatcacacttaattttttaaatgacattttatattgttcataatttaaaaaagagaagtaagccct 41227525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 295 - 376
Target Start/End: Original strand, 37711285 - 37711366
Alignment:
Q  295 attttacattgttcgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    |||||| | ||| |||||||||||||  |||  | | ||||||| ||||||||||||| |||||||| ||||||||||||||    
T  37711285 attttatagtgtccgtaatttaaaaatgaaatctaaaccctcccctcccttcccctcctaaaccctccatccaaacacaccc 37711366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 340 - 376
Target Start/End: Original strand, 1968566 - 1968602
Alignment:
Q  340 tcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    ||||||||||||| |||||||||||||||||||||||    
T  1968566 tcccttcccctcctaaaccctcaatccaaacacaccc 1968602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 376
Target Start/End: Original strand, 6938422 - 6938490
Alignment:
Q  308 cgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    |||||||||||||  |||||||| ||||||| ||| ||||||||  ||||| || ||||||||||||||    
T  6938422 cgtaatttaaaaatgaaaagtgaaccctcccctccattcccctcataaaccttccatccaaacacaccc 6938490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 376
Target Start/End: Original strand, 17938164 - 17938351
Alignment:
Q  195 tttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaattt------aa 288  Q
    ||||||| |||  ||||||||  |||| |||||||||| || || ||| | |||||| || |||||| |||||||||||  |||||||||||      ||    
T  17938164 tttttaaattatggacattatggaatgttttttaaaaatttaaaataataacatgataaacgatcatataatacttcaatcacacttaatttatttaaaa 17938263  T
Q  289 aaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    ||| | || ||| || ||| ||||||||||||| |||||| | | |||   ||||||||||||| |||  ||||||||||||| ||||    
T  17938264 aaaaatatgttatatagtttgtaatttaaaaaagaaaagtaaactctcatctcccttcccctcctaaattctcaatccaaacataccc 17938351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 294 - 374
Target Start/End: Complemental strand, 29993854 - 29993774
Alignment:
Q  294 cattttacattgttcgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacac 374  Q
    ||||||| | ||| |||||||||||||| ||||  ||| |||||  || |||||||||| ||||||| |||||||||||||    
T  29993854 cattttatagtgtccgtaatttaaaaaagaaaaacgagtcctccactcacttcccctcctaaacccttaatccaaacacac 29993774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 309 - 376
Target Start/End: Complemental strand, 26167005 - 26166938
Alignment:
Q  309 gtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    ||||||||||||| ||||   | | ||||| ||| ||||||||| |||||||||||||||||||||||    
T  26167005 gtaatttaaaaaagaaaaacaaactctcccctccattcccctcctaaaccctcaatccaaacacaccc 26166938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 323 - 370
Target Start/End: Complemental strand, 35565612 - 35565565
Alignment:
Q  323 aaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaac 370  Q
    |||||| ||||||||| ||||||||||| | |||||||||||||||||    
T  35565612 aaaagtaagccctcccctcccttcccctgctaaaccctcaatccaaac 35565565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 309 - 376
Target Start/End: Complemental strand, 54320502 - 54320436
Alignment:
Q  309 gtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    ||||||||||||| ||||   | ||||||| |||||| |||||| |||||||||||||||||||||||    
T  54320502 gtaatttaaaaaagaaaatcaaaccctccc-tccctttccctcctaaaccctcaatccaaacacaccc 54320436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 293 - 375
Target Start/End: Complemental strand, 32192891 - 32192809
Alignment:
Q  293 acattttacattgttcgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacacc 375  Q
    |||||||||||| ||  ||||||||||||||||||||| ||||||  ||  ||   ||||||||||||| ||| |||||||||    
T  32192891 acattttacattattgataatttaaaaaataaaagtgaaccctccattctttttttctccaaaaccctcgatcaaaacacacc 32192809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 164 - 242
Target Start/End: Original strand, 35543333 - 35543411
Alignment:
Q  164 gagggtttaggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaa 242  Q
    ||||||||| || |||||  ||||  || ||||||||| |||   |||||||||||| |||||||||||||||||||||    
T  35543333 gagggtttaagaagggagaacttatttttcttttttaaattaggaacattataaaataatttttaaaaaattgaattaa 35543411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 310 - 376
Target Start/End: Original strand, 37761641 - 37761707
Alignment:
Q  310 taatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    |||||||||||| |||||  ||||||||| |||||||||||   ||| |||| ||||||||||||||    
T  37761641 taatttaaaaaagaaaaggaagccctcccctcccttccccttttaaatcctccatccaaacacaccc 37761707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 335 - 376
Target Start/End: Original strand, 41174547 - 41174588
Alignment:
Q  335 tcccatcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    |||| ||||||||||||| |||||||| ||||||||||||||    
T  41174547 tcccctcccttcccctcctaaaccctccatccaaacacaccc 41174588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 376
Target Start/End: Original strand, 45132610 - 45132738
Alignment:
Q  247 atgatcaatgatcatgtaatacttcaaaaacacttaatttaaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccatcccttc 346  Q
    ||||| || |||||| |||||||||||  ||||||||||||     |||| ||| || || |||||||||||||| |||||| | || || | || ||||    
T  45132610 atgataaacgatcatataatacttcaatcacacttaatttatttt-acatattatatagtccgtaatttaaaaaagaaaagtaaaccatctcctctcttc 45132708  T
Q  347 ccctccaaaaccctcaatccaaacacaccc 376  Q
    |||||| |||| |||||| |||||||||||    
T  45132709 ccctcctaaactctcaattcaaacacaccc 45132738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 376
Target Start/End: Complemental strand, 5730875 - 5730831
Alignment:
Q  332 ccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    |||||||||| ||| |||||| |||||||| ||||||||||||||    
T  5730875 ccctcccatctctttccctcctaaaccctccatccaaacacaccc 5730831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 334 - 374
Target Start/End: Original strand, 5731032 - 5731072
Alignment:
Q  334 ctcccatcccttcccctccaaaaccctcaatccaaacacac 374  Q
    ||||| ||||||||||||| ||||||||||| |||||||||    
T  5731032 ctcccctcccttcccctcctaaaccctcaattcaaacacac 5731072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 154 - 230
Target Start/End: Original strand, 11842325 - 11842401
Alignment:
Q  154 tgtttgggaagagggtttaggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaa 230  Q
    |||||||  ||||||||||| |||||||| ||||| || |||||| || ||| ||||| ||||||||  ||||||||    
T  11842325 tgtttggatagagggtttagaaggggaggacttacttttctttttcaaattacagacactataaaatattttttaaa 11842401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 308 - 376
Target Start/End: Original strand, 34995224 - 34995292
Alignment:
Q  308 cgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    |||||||||||||| |||||| || | | || || |||||| ||| |||||||||||| ||||||||||    
T  34995224 cgtaatttaaaaaagaaaagtaagtcttaccctcacttcccttcctaaaccctcaatctaaacacaccc 34995292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 376
Target Start/End: Complemental strand, 36151621 - 36151577
Alignment:
Q  332 ccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    ||||| |||| |||||||||||||||||||||| |||| ||||||    
T  36151621 ccctctcatctcttcccctccaaaaccctcaattcaaatacaccc 36151577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 340 - 376
Target Start/End: Complemental strand, 53260755 - 53260719
Alignment:
Q  340 tcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    ||||||||||||| |||||||| ||||||||||||||    
T  53260755 tcccttcccctcctaaaccctccatccaaacacaccc 53260719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 129; Significance: 1e-66; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 173 - 376
Target Start/End: Original strand, 12022178 - 12022386
Alignment:
Q  173 ggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttca 272  Q
    |||||||||||||||| || ||||||||| |||   |||||||||||||||||||| ||||||||||||||| |||||| ||||||||| ||||||||||    
T  12022178 ggaggggagggcttacttttcttttttaaattacgaacattataaaatgatttttagaaaattgaattaacaacatgataaatgatcatataatacttca 12022277  T
Q  273 aaaacacttaa-----tttaaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatcca 367  Q
    |||||||||||     |||||||| |||||||||||||| ||||||||||||||||||||||||||||||| ||| ||||||||| ||||||||||||||    
T  12022278 aaaacacttaatttattttaaaaaaacattttacattgtccgtaatttaaaaaataaaagtgagccctcccctcctttcccctcctaaaccctcaatcca 12022377  T
Q  368 aacacaccc 376  Q
    |||||||||    
T  12022378 aacacaccc 12022386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 145 - 337
Target Start/End: Complemental strand, 39449546 - 39449344
Alignment:
Q  145 ttaagggtgtgtttgggaagagggtttaggaggggaggg-----cttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaat 239  Q
    |||||||||||||||||||||| ||||||||||||||||     ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  39449546 ttaagggtgtgtttgggaagagagtttaggaggggaggggagggcttacattccttttttaatttaaagacgttataaaattatttttaaaaaattgaat 39449447  T
Q  240 taacagcatgatcaatgatcatgtaatacttcaaaaacacttaat-----ttaaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccc 334  Q
    ||||| |||||| ||||||||| |||||||||||||||| |||||     |||||||||||||| ||||||||||||||||||||||||||||||||| |    
T  39449446 taacaacatgattaatgatcatataatacttcaaaaacagttaatttatcttaaaaagacatttcacattgttcgtaatttaaaaaataaaagtgagctc 39449347  T
Q  335 tcc 337  Q
    |||    
T  39449346 tcc 39449344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 184 - 376
Target Start/End: Original strand, 8815187 - 8815384
Alignment:
Q  184 cttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacactt-a 282  Q
    ||||| || ||||||||| |||  ||||||||||||||||||||| |||||||||| |||| |||||| |||||| || ||||||||||||||||||| |    
T  8815187 cttacttttcttttttaaattacggacattataaaatgatttttagaaaattgaatcaacaacatgataaatgattatataatacttcaaaaacacttta 8815286  T
Q  283 attta----aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    |||||    |||| |||||||||| ||||||||||||||||| ||||||||| ||||||| ||||| ||||||| |||||||||||||||||||||||    
T  8815287 atttatttgaaaaaacattttacagtgttcgtaatttaaaaattaaaagtgaaccctcccctccctccccctcctaaaccctcaatccaaacacaccc 8815384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 173 - 376
Target Start/End: Complemental strand, 43732896 - 43732680
Alignment:
Q  173 ggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttca 272  Q
    ||||||||||| |||| || ||||||||| |||  ||||||||||||||||||||  |||||||||||||||  ||||| ||||||||| ||||||||||    
T  43732896 ggaggggagggtttacttttcttttttaaattacggacattataaaatgattttttgaaaattgaattaacaatatgataaatgatcatataatacttca 43732797  T
Q  273 aaaacacttaattt-------------aaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccc 359  Q
    ||||||||||||||             ||||| ||||||||||||||| ||||||||||||||||||||||| |||||  ||||||||||||| ||||||    
T  43732796 aaaacacttaatttattttttttaaaaaaaaaaacattttacattgttagtaatttaaaaaataaaagtgagtcctcctctcccttcccctcctaaaccc 43732697  T
Q  360 tcaatccaaacacaccc 376  Q
    |||||||||||||||||    
T  43732696 tcaatccaaacacaccc 43732680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 148 - 374
Target Start/End: Original strand, 20472702 - 20472933
Alignment:
Q  148 agggtgtgtttgggaagagggtttaggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagca 247  Q
    |||||||||||||  |||||| ||| ||||| ||||||||| || ||||||||| ||| |||||||||||||| | ||||| |||||||||||||||  |    
T  20472702 agggtgtgtttggatagagggattaagagggaagggcttacttttcttttttaaattacagacattataaaataaattttagaaaattgaattaacaata 20472801  T
Q  248 tgatcaatgatcatgtaatacttcaaaaacacttaattta-----aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccatcc 342  Q
    ||||  |||||||| ||||||||||||||||||| |||||     |||| |||  |||||||||||||||||||||||||||||||||| ||| || |||    
T  20472802 tgatatatgatcatataatacttcaaaaacacttgatttatttttaaaaaacaacttacattgttcgtaatttaaaaaataaaagtgagtccttccttcc 20472901  T
Q  343 cttcccctccaaaaccctcaatccaaacacac 374  Q
    ||| |||| | ||||| |||||||||||||||    
T  20472902 ctttcccttctaaaccttcaatccaaacacac 20472933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 173 - 376
Target Start/End: Complemental strand, 30365339 - 30365131
Alignment:
Q  173 ggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttca 272  Q
    |||||||||||||| | || ||||||||| ||| ||||||||| |||||||||||| ||||||||||||||| |||||| |||||| || ||| ||||||    
T  30365339 ggaggggagggcttccttttcttttttaaattacagacattatgaaatgatttttagaaaattgaattaacaacatgataaatgattatataacacttca 30365240  T
Q  273 aaaacacttaattta-----aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatcca 367  Q
    |||||||||||||||     |||| | ||||||  |||||||||||||||||| ||||||||| | ||||| ||| ||| ||||| ||||||||||||||    
T  30365239 aaaacacttaatttattctaaaaaaatattttatgttgttcgtaatttaaaaattaaaagtgaactctcccctcctttctcctcctaaaccctcaatcca 30365140  T
Q  368 aacacaccc 376  Q
    |||||||||    
T  30365139 aacacaccc 30365131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 195 - 375
Target Start/End: Complemental strand, 16024341 - 16024155
Alignment:
Q  195 tttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaattta------a 288  Q
    ||||||| |||  ||||||||||||||||||||| ||||||||||||||| |||||| ||||||||| |||||||||||||||||||||||||      |    
T  16024341 tttttaaattacggacattataaaatgatttttagaaaattgaattaacaacatgataaatgatcatataatacttcaaaaacacttaatttatttaaaa 16024242  T
Q  289 aaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacacc 375  Q
    |||  ||||||| |||||||||||||||||||  |||| ||||| ||||| ||||||||| ||| ||||||||||||||||||||||    
T  16024241 aaaatcattttatattgttcgtaatttaaaaacaaaaactgagctctcccctcccttcccttcctaaaccctcaatccaaacacacc 16024155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 169 - 376
Target Start/End: Complemental strand, 9933454 - 9933241
Alignment:
Q  169 tttaggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatac 268  Q
    ||||||||||||||| |||| || |||||||||  |   ||||||||||||||||||| ||||||||||||||||| |||||| ||||||||| |||||     
T  9933454 tttaggaggggagggtttacttttcttttttaaaatttggacattataaaatgattttaaaaaaattgaattaacaacatgataaatgatcatataatat 9933355  T
Q  269 ttcaaaaacacttaattt------aaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctca 362  Q
    |||||||| |||||||||      ||||| | ||||||||||||||||||||||||| ||||||||||   || || ||| ||| ||||| ||||| |||    
T  9933354 ttcaaaaatacttaatttattttgaaaaaaatattttacattgttcgtaatttaaaatataaaagtgaattcttccctcctttctcctcctaaaccttca 9933255  T
Q  363 atccaaacacaccc 376  Q
    ||||||||||||||    
T  9933254 atccaaacacaccc 9933241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 214 - 377
Target Start/End: Complemental strand, 43826500 - 43826332
Alignment:
Q  214 ataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaattta-----aaaagacattttacattgttc 308  Q
    ||||||| ||||||| ||||||||||||||| |||||| |||||||||  |||||||||||||||||||| |||     |||| ||||||||||||||||    
T  43826500 ataaaataatttttagaaaattgaattaacaacatgataaatgatcataaaatacttcaaaaacacttaacttattttgaaaaaacattttacattgttc 43826401  T
Q  309 gtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacacccc 377  Q
    |||||||| ||||||||| ||| | ||||| ||| ||||||||| ||| |||||||| |||||||||||    
T  43826400 gtaatttacaaaataaaaatgaactctcccctccattcccctcctaaatcctcaatctaaacacacccc 43826332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 176 - 369
Target Start/End: Complemental strand, 34196514 - 34196316
Alignment:
Q  176 ggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaa 275  Q
    ||||||||||||| || |||||| |||| | |||||||||||||||||||||| ||||||||||||||| || ||| || |||||| |||||||||||||    
T  34196514 ggggagggcttacttttctttttaaatt-acagacattataaaatgatttttagaaaattgaattaacaacaagataaacgatcatataatacttcaaaa 34196416  T
Q  276 acactta---attt----aaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaa 368  Q
    |||||||   ||||    ||||| ||| || ||||||||||||||||||||||| ||||||| ||| ||| |||||||||||||  | ||||||||||||    
T  34196415 acacttatttatttaaaaaaaaaaacacttcacattgttcgtaatttaaaaaattaaagtga-cccccccctcccttcccctcctgatccctcaatccaa 34196317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 216 - 376
Target Start/End: Original strand, 9434377 - 9434542
Alignment:
Q  216 aaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaattt------aaaaagacattttacattgttcg 309  Q
    ||||| ||||||||||||||||||||||| |||||| |||||| || ||||||||||||| ||||||||||      ||||| ||||||||||||||||     
T  9434377 aaaataatttttaaaaaattgaattaacaacatgataaatgataatataatacttcaaaaccacttaatttattaaaaaaaaaacattttacattgttcc 9434476  T
Q  310 taatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    ||||||||||||||||||||| | || |||||  || |||||  |||||||||||||||||||||||    
T  9434477 taatttaaaaaataaaagtgaactcttccatctatt-ccctcgtaaaccctcaatccaaacacaccc 9434542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 195 - 376
Target Start/End: Original strand, 8671849 - 8672037
Alignment:
Q  195 tttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatg--atcaatgatcatgtaatacttcaaaaacacttaa-----ttta 287  Q
    ||||||| |||  ||||||||||||||||||||| |||||||||||||||  |||  |  ||||||||| |||||||||||||| ||||||     ||||    
T  8671849 tttttaaattacggacattataaaatgatttttagaaaattgaattaacaatatgaaaaaaatgatcatataatacttcaaaaatacttaatttatttta 8671948  T
Q  288 aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    |||| |||||||||||| || |||||||||||||||||| | || | |||| | ||||||||| | ||| |||||||||||||||||||    
T  8671949 aaaatacattttacattatttgtaatttaaaaaataaaattaagtcatcccctaccttccccttctaaatcctcaatccaaacacaccc 8672037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 208 - 376
Target Start/End: Original strand, 40633059 - 40633231
Alignment:
Q  208 gacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaattta-----aaaagacattttaca 302  Q
    ||||||||||||| ||||||| ||||||||||||||| |||||| ||||||  | ||||| |||||||||||||||||||     |||  |||||||||     
T  40633059 gacattataaaataatttttagaaaattgaattaacaacatgataaatgattgtataatatttcaaaaacacttaatttattttaaaacaacattttacg 40633158  T
Q  303 ttgttcgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    |||||||||||| ||||| ||||| ||| || |||  | ||||||| ||| |||||||||||||||||||||||    
T  40633159 ttgttcgtaattgaaaaattaaaattgaacc-tccgcttccttcccttccgaaaccctcaatccaaacacaccc 40633231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 210 - 374
Target Start/End: Complemental strand, 6453356 - 6453185
Alignment:
Q  210 cattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaa------tttaaaaagacattttacat 303  Q
    ||||||||||||||||||| ||||||||||||| | |||||| | | ||||| |||||||||||||||||||||      || ||||| | |||||||||    
T  6453356 cattataaaatgatttttagaaaattgaattaataacatgataagtaatcatataatacttcaaaaacacttaatatattttaaaaaaaatattttacat 6453257  T
Q  304 tgttcgtaattt-aaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacac 374  Q
    | |||||||||| |||||||||||||||| | |||| ||||||   |||| |||||||||||||||| ||||    
T  6453256 tattcgtaatttaaaaaaataaaagtgagtcttcccctccctttttctcccaaaccctcaatccaaatacac 6453185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 287 - 373
Target Start/End: Original strand, 7394615 - 7394701
Alignment:
Q  287 aaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacaca 373  Q
    ||||| || |||| |||||||||||||||||||||||||||||| || |||| ||||||||||||| ||||||||||||||||||||    
T  7394615 aaaaaaacgttttgcattgttcgtaatttaaaaaataaaagtgaaccatcccctcccttcccctcctaaaccctcaatccaaacaca 7394701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 208 - 270
Target Start/End: Complemental strand, 29937676 - 29937614
Alignment:
Q  208 gacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatactt 270  Q
    ||||||||||||||||||||| ||||||||||||||| |||||| ||||||||| ||||||||    
T  29937676 gacattataaaatgatttttagaaaattgaattaacaacatgataaatgatcatataatactt 29937614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 294 - 376
Target Start/End: Original strand, 43732848 - 43732930
Alignment:
Q  294 cattttacattgttcgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    ||||||| | ||| |||||||||||||| |||||| | ||||||| ||||||||||||| |||||||| ||||||||||||||    
T  43732848 cattttataatgtccgtaatttaaaaaagaaaagtaaaccctcccctcccttcccctcctaaaccctccatccaaacacaccc 43732930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 308 - 371
Target Start/End: Complemental strand, 1281212 - 1281149
Alignment:
Q  308 cgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaaca 371  Q
    |||||||||||||| |||||| | ||||| ||||||||||||||| ||||||||||||||||||    
T  1281212 cgtaatttaaaaaagaaaagtaaaccctctcatcccttcccctcctaaaccctcaatccaaaca 1281149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 310 - 376
Target Start/End: Original strand, 31543249 - 31543315
Alignment:
Q  310 taatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    |||||||||||| |||||| | ||||||| ||||||||||||| |||||||||||| ||||||||||    
T  31543249 taatttaaaaaagaaaagtaaaccctcccctcccttcccctcctaaaccctcaatcgaaacacaccc 31543315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 308 - 376
Target Start/End: Original strand, 1027023 - 1027091
Alignment:
Q  308 cgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    |||||||||||||| |||||||| |||| || ||||||||| ||| ||||||| |||||||||||||||    
T  1027023 cgtaatttaaaaaagaaaagtgaacccttccctcccttcccttcctaaacccttaatccaaacacaccc 1027091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 294 - 376
Target Start/End: Complemental strand, 12022226 - 12022143
Alignment:
Q  294 cattttacattgttcgtaatttaaaaaataaaagtgagccctcccatcccttcccc-tccaaaaccctcaatccaaacacaccc 376  Q
    ||||||| | |||||||||||||||||| |||||| ||||||||| |||||||||| ||  |||||||| |||| |||||||||    
T  12022226 cattttataatgttcgtaatttaaaaaagaaaagtaagccctcccctcccttccccttctcaaaccctccatcctaacacaccc 12022143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 308 - 376
Target Start/End: Complemental strand, 2248521 - 2248453
Alignment:
Q  308 cgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    ||||||||||||||  ||| ||| | ||||| ||||||||||||| |||| ||||||||||||||||||    
T  2248521 cgtaatttaaaaaaggaaattgaactctcccctcccttcccctcctaaactctcaatccaaacacaccc 2248453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 312 - 376
Target Start/End: Complemental strand, 13405041 - 13404977
Alignment:
Q  312 atttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    |||||||||| |||||| |   ||||||||||||||||||| ||||||||||||||| |||||||    
T  13405041 atttaaaaaagaaaagtaatttctcccatcccttcccctcctaaaccctcaatccaaccacaccc 13404977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 308 - 376
Target Start/End: Original strand, 34634318 - 34634386
Alignment:
Q  308 cgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    |||||||||||||  |||| ||| ||||| ||||||||||||||| |||| ||| ||||||||||||||    
T  34634318 cgtaatttaaaaataaaaaatgaaccctcacatcccttcccctcctaaactctccatccaaacacaccc 34634386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 305 - 376
Target Start/End: Original strand, 9718651 - 9718722
Alignment:
Q  305 gttcgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    |||| |||||||||||| |||||| | |  |||| ||||||| ||||| |||||||||||||||||||||||    
T  9718651 gttcataatttaaaaaagaaaagtaaactttcccctcccttctcctcctaaaccctcaatccaaacacaccc 9718722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 284 - 371
Target Start/End: Original strand, 36308994 - 36309081
Alignment:
Q  284 tttaaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaaca 371  Q
    |||||||| | |||| ||| ||| ||||||||||| |  |||||| | ||||||| ||||||||||||| |||||||| |||||||||    
T  36308994 tttaaaaatatatttcacaatgtacgtaatttaaagatgaaaagtaaaccctcccctcccttcccctcctaaaccctccatccaaaca 36309081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 310 - 376
Target Start/End: Original strand, 7503131 - 7503197
Alignment:
Q  310 taatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    |||||||||||  |||||| | ||||||| |||| |||||||| ||| |||||||||||||||||||    
T  7503131 taatttaaaaacgaaaagtaaaccctcccctcccctcccctcccaaagcctcaatccaaacacaccc 7503197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 294 - 376
Target Start/End: Complemental strand, 8815224 - 8815142
Alignment:
Q  294 cattttacattgttcgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    ||||||| | ||| |||||||||||||| |||||| || | || | || |||||||||| |||||||| ||||||||||||||    
T  8815224 cattttataatgtccgtaatttaaaaaagaaaagtaagtcatcacctctcttcccctcctaaaccctccatccaaacacaccc 8815142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 224 - 374
Target Start/End: Original strand, 38198135 - 38198284
Alignment:
Q  224 ttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaattta----aaaagacattttacattgttcgtaatttaaaa 319  Q
    |||| |||||||||| ||||| ||||||  |||||||| |||||||||||  |||||||||| |    |||| ||| |||| | |||  |||||||||||    
T  38198135 tttttaaaaattgaaataacaacatgatatatgatcatataatacttcaatcacacttaattcattttaaaaaacactttatagtgtctgtaatttaaaa 38198234  T
Q  320 aataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacac 374  Q
    |  |||||| || |||||||     ||| ||||||||||||| ||||||||||||    
T  38198235 atgaaaagtaagtcctccca-----tccactccaaaaccctccatccaaacacac 38198284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 352
Target Start/End: Original strand, 30581988 - 30582032
Alignment:
Q  308 cgtaatttaaaaaataaaagtgagccctcccatcccttcccctcc 352  Q
    |||||||||||||| |||||| ||||||||| |||||||||||||    
T  30581988 cgtaatttaaaaaagaaaagtaagccctcccctcccttcccctcc 30582032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 376
Target Start/End: Complemental strand, 31543141 - 31543073
Alignment:
Q  308 cgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    |||||||||||||  |||||| | ||||||| ||||||||||||  |||||||| ||||||||| ||||    
T  31543141 cgtaatttaaaaatgaaaagtaaaccctcccctcccttcccctcttaaaccctccatccaaacataccc 31543073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 341 - 376
Target Start/End: Complemental strand, 16652994 - 16652959
Alignment:
Q  341 cccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    |||| |||||||||||||||||||||||||||||||    
T  16652994 ccctccccctccaaaaccctcaatccaaacacaccc 16652959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 309 - 376
Target Start/End: Original strand, 30365306 - 30365373
Alignment:
Q  309 gtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    ||||||||||||| |||||  ||||||||| |||||| |||| | ||| |||| ||||||||||||||    
T  30365306 gtaatttaaaaaagaaaaggaagccctcccctcccttacccttctaaatcctccatccaaacacaccc 30365373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 322 - 376
Target Start/End: Complemental strand, 40633051 - 40632997
Alignment:
Q  322 taaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    ||||||| ||||||||  ||||||||||||| |||||||| || |||||||||||    
T  40633051 taaaagtaagccctcctctcccttcccctcctaaaccctccattcaaacacaccc 40632997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 308 - 373
Target Start/End: Complemental strand, 7979209 - 7979144
Alignment:
Q  308 cgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacaca 373  Q
    |||||||||||||| |||||| | | ||||  |||||||| || | ||||||||||||||||||||    
T  7979209 cgtaatttaaaaaagaaaagtaaactctcctctcccttcctcttctaaaccctcaatccaaacaca 7979144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 208 - 285
Target Start/End: Original strand, 24243118 - 24243194
Alignment:
Q  208 gacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaatt 285  Q
    |||| |||||||||  ||||||||| ||||| ||| | |||||| ||||||||| |||||||||||  ||||||||||    
T  24243118 gacactataaaatgtcttttaaaaa-ttgaaataataacatgataaatgatcatataatacttcaatcacacttaatt 24243194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 340 - 376
Target Start/End: Complemental strand, 3726900 - 3726864
Alignment:
Q  340 tcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    ||||||||||||| |||||||| ||||||||||||||    
T  3726900 tcccttcccctcctaaaccctccatccaaacacaccc 3726864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 340 - 376
Target Start/End: Original strand, 4247727 - 4247763
Alignment:
Q  340 tcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    ||||||||||||| ||||| |||||||||||||||||    
T  4247727 tcccttcccctcctaaaccttcaatccaaacacaccc 4247763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 309 - 373
Target Start/End: Original strand, 11575582 - 11575646
Alignment:
Q  309 gtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacaca 373  Q
    ||||||||||||  |||||| | ||||||| ||||||| | ||| ||||||| ||||||||||||    
T  11575582 gtaatttaaaaatgaaaagtaaaccctcccctcccttctcatcctaaaccctgaatccaaacaca 11575646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 294 - 374
Target Start/End: Original strand, 16024315 - 16024394
Alignment:
Q  294 cattttacattgttcgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacac 374  Q
    ||||||| | ||| |||||||||||||  |||||| | | ||||| ||||||||||||| ||| |||| ||||||||||||    
T  16024315 cattttataatgtccgtaatttaaaaag-aaaagtaaactctcccctcccttcccctcctaaatcctccatccaaacacac 16024394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 241 - 285
Target Start/End: Complemental strand, 27487131 - 27487087
Alignment:
Q  241 aacagcatgatcaatgatcatgtaatacttcaaaaacacttaatt 285  Q
    |||| |||||| ||||||||| ||||||||||| |||||||||||    
T  27487131 aacaacatgataaatgatcatataatacttcaataacacttaatt 27487087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 376
Target Start/End: Complemental strand, 41103549 - 41103505
Alignment:
Q  332 ccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    ||||||| || |||||||||| |||||||| ||||||||||||||    
T  41103549 ccctcccctctcttcccctcctaaaccctccatccaaacacaccc 41103505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 129; Significance: 1e-66; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 173 - 376
Target Start/End: Complemental strand, 10204785 - 10204577
Alignment:
Q  173 ggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttca 272  Q
    |||||||||| ||||| || ||||||||||||| |||||||| ||||||||||||||||||||||||||||| | | || ||||||||| ||||||||||    
T  10204785 ggaggggaggacttacttttcttttttaatttacagacattaaaaaatgatttttaaaaaattgaattaacaacgtaataaatgatcatataatacttca 10204686  T
Q  273 aaaacacttaa-----tttaaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatcca 367  Q
    |||||||||||     |||||||||||||||||||||||| |||||||||||||||||||||||||||| | ||||||||||||| |||||||| |||||    
T  10204685 aaaacacttaatttattttaaaaagacattttacattgttggtaatttaaaaaataaaagtgagccctcacctcccttcccctcctaaaccctcgatcca 10204586  T
Q  368 aacacaccc 376  Q
    |||||||||    
T  10204585 aacacaccc 10204577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 173 - 376
Target Start/End: Original strand, 15986659 - 15986867
Alignment:
Q  173 ggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttca 272  Q
    |||||||||| ||||  || ||||||||||||| |||||||||||||||| ||||||||||||||||||||| |||    ||||||||| |||||||| |    
T  15986659 ggaggggaggacttaattttcttttttaatttacagacattataaaatgacttttaaaaaattgaattaacaacatttaaaatgatcatataatacttta 15986758  T
Q  273 aaaacacttaattta-----aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatcca 367  Q
    |||||||||||||||     ||||||||||||||||||||||||||||||||||||||||||||||||||  | ||||||||||| ||||||||||||||    
T  15986759 aaaacacttaatttattttaaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcctcttccttcccctcctaaaccctcaatcca 15986858  T
Q  368 aacacaccc 376  Q
    |||||||||    
T  15986859 aacacaccc 15986867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 148 - 376
Target Start/End: Original strand, 40305670 - 40305908
Alignment:
Q  148 agggtgtgtttgggaagagggtttaggagggga-----gggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaa 242  Q
    |||||||||||||   |||||||||||||||||     |||||||  || ||||||||| ||| |||||||||||||| ||||||| |||||||||||||    
T  40305670 agggtgtgtttggatggagggtttaggaggggaagggagggcttagttttcttttttaaattacagacattataaaataatttttagaaaattgaattaa 40305769  T
Q  243 cagcatgatcaatgatcatgtaatacttcaaaaacacttaattta-----aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcc 337  Q
    ||  ||||| ||||||||| || |||||||||||| |||||||||     |||| ||||||||||||| |||||||||||||||||||| ||||  ||||    
T  40305770 caatatgataaatgatcatatagtacttcaaaaacccttaatttattttgaaaaaacattttacattggtcgtaatttaaaaaataaaaatgagttctcc 40305869  T
Q  338 catcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    | ||||||| ||||| |||||||||||||||||||||||    
T  40305870 cctcccttctcctcctaaaccctcaatccaaacacaccc 40305908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 148 - 375
Target Start/End: Original strand, 8551427 - 8551660
Alignment:
Q  148 agggtgtgtttgggaagagggtttaggagggga-gggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagc 246  Q
    |||||||||||||  ||||||||||  |||| | ||| |||||||  ||| ||||  || ||||||||||||||||||||||||||||| |||||||| |    
T  8551427 agggtgtgtttggatagagggtttaatagggaaagggtttacatttatttcttaaactacagacattataaaatgatttttaaaaaattaaattaacaac 8551526  T
Q  247 atgatcaatgatcatgtaatacttcaaaaacacttaattta-----aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccatc 341  Q
    || || ||||||||| |||||||| ||||||||||||||||     |||| ||||||||||||| ||||||||||||||||||||||||| || ||| ||    
T  8551527 attataaatgatcatataatactttaaaaacacttaatttatttttaaaacacattttacattgctcgtaatttaaaaaataaaagtgagaccccccctc 8551626  T
Q  342 ccttcccctccaaaaccctcaatccaaacacacc 375  Q
     |||||||||| ||||| ||||||||||||||||    
T  8551627 tcttcccctcctaaaccttcaatccaaacacacc 8551660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 173 - 376
Target Start/End: Original strand, 33744228 - 33744436
Alignment:
Q  173 ggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttca 272  Q
    ||||||||||| |||| || ||||||||| |||  ||||||||||||||||||||  ||||||||||||||| |||||| ||||||||| || | |||||    
T  33744228 ggaggggagggtttacttttcttttttaaattatggacattataaaatgattttttgaaaattgaattaacaacatgataaatgatcatatatttcttca 33744327  T
Q  273 aaaacacttaa-----tttaaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatcca 367  Q
    |||||||||||     |||||||| |||||||  |||||||||||||||||| |||||||||||||||||| |||||||  |||| ||||||||||||||    
T  33744328 aaaacacttaatttattttaaaaaaacattttgaattgttcgtaatttaaaatataaaagtgagccctcccctcccttcatctcctaaaccctcaatcca 33744427  T
Q  368 aacacaccc 376  Q
    || ||||||    
T  33744428 aatacaccc 33744436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 173 - 375
Target Start/End: Complemental strand, 34981019 - 34980812
Alignment:
Q  173 ggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttca 272  Q
    |||||||||| ||||| || ||||||||| |||  |||||||||||||||||| || |||||||| |||||| |||||| |||||| || ||||||||||    
T  34981019 ggaggggaggacttacttttcttttttaaattatggacattataaaatgatttatagaaaattgagttaacaacatgataaatgattatataatacttca 34980920  T
Q  273 aaaacacttaattta-----aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatcca 367  Q
    |||||||||||||||     |||| | ||||||| |||||||||||||||||| ||||||||| |||| || ||||||||||||| ||||| ||||||||    
T  34980919 aaaacacttaatttattttaaaaaaatattttacgttgttcgtaatttaaaaattaaaagtgaacccttccctcccttcccctcctaaaccttcaatcca 34980820  T
Q  368 aacacacc 375  Q
    ||||||||    
T  34980819 aacacacc 34980812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 173 - 376
Target Start/End: Complemental strand, 10043461 - 10043253
Alignment:
Q  173 ggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttca 272  Q
    |||||||||| || || || ||||||||| |||   | |||||||||||||||||| ||||||||||||||| ||| || ||| ||||| ||||||||||    
T  10043461 ggaggggaggactcacttttcttttttaaattacgaatattataaaatgatttttagaaaattgaattaacaacattataaataatcatataatacttca 10043362  T
Q  273 aaaacacttaa-----tttaaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatcca 367  Q
    |||||||||||     |||||||  | ||||||||||||||||||||||||||||||||||||| | |||| ||||||||||||  ||||| |||||| |    
T  10043361 aaaacacttaatttcttttaaaacaatattttacattgttcgtaatttaaaaaataaaagtgagtcatcccctcccttcccctcataaaccatcaatcta 10043262  T
Q  368 aacacaccc 376  Q
    || ||||||    
T  10043261 aatacaccc 10043253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 194 - 376
Target Start/End: Complemental strand, 21581135 - 21580948
Alignment:
Q  194 ttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaattta-----a 288  Q
    |||||||| |||  ||| |||| |||| ||||||| ||||||||||||||| |||||| |||| |||| | |||||||||||||||||||||||     |    
T  21581135 ttttttaaattatggacgttatgaaataatttttagaaaattgaattaacaacatgataaatgttcatatgatacttcaaaaacacttaatttattttaa 21581036  T
Q  289 aaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    ||| | |||||||||||||||||||||| ||||||||||||| ||||||| |||||| | ||||||||||| ||||||||| ||||||    
T  21581035 aaaaatattttacattgttcgtaatttagaaaataaaagtgacccctcccctccctttctctccaaaacccccaatccaaatacaccc 21580948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 223 - 338
Target Start/End: Complemental strand, 5688572 - 5688452
Alignment:
Q  223 tttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaat-----ttaaaaagacattttacattgttcgtaatttaa 317  Q
    |||||| ||||||||||||||| ||||||  ||||| || ||||||||||||||||||||||     ||||||| |||||||||||||||||||||||||    
T  5688572 tttttagaaaattgaattaacaacatgattgatgatgatataatacttcaaaaacacttaatctattttaaaaaaacattttacattgttcgtaatttaa 5688473  T
Q  318 aaaataaaagtgagccctccc 338  Q
    ||||||||||||| |||||||    
T  5688472 aaaataaaagtgaaccctccc 5688452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 184 - 287
Target Start/End: Complemental strand, 6382525 - 6382422
Alignment:
Q  184 cttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaa 283  Q
    ||||| || ||||| |||||||  |||||||||||||  |||||| ||||||||||||||| |||||| |||| |||||| |||||||||||| ||||||    
T  6382525 cttacttttcttttctaatttacggacattataaaatactttttagaaaattgaattaacaacatgataaatgttcatgtgatacttcaaaaagacttaa 6382426  T
Q  284 ttta 287  Q
    ||||    
T  6382425 ttta 6382422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 304 - 377
Target Start/End: Original strand, 13634882 - 13634955
Alignment:
Q  304 tgttcgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacacccc 377  Q
    |||||||||||||||||  |||||| | ||||||| ||||||||||||| ||||||||||||||||||||||||    
T  13634882 tgttcgtaatttaaaaatgaaaagtaacccctcccctcccttcccctcctaaaccctcaatccaaacacacccc 13634955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 288 - 376
Target Start/End: Complemental strand, 14245177 - 14245089
Alignment:
Q  288 aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    |||| |||||| ||| ||| |||||||||||||| |||||| |  |||||| ||||||||||||| |||||||||||||||||||||||    
T  14245177 aaaaaacatttcacagtgtccgtaatttaaaaaagaaaagtaaatcctcccctcccttcccctcctaaaccctcaatccaaacacaccc 14245089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 308 - 376
Target Start/End: Complemental strand, 7544205 - 7544137
Alignment:
Q  308 cgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    |||||||||||||| |||| | ||||||||| ||||||||| ||| |||||||||||||||||||||||    
T  7544205 cgtaatttaaaaaagaaaatttagccctcccctcccttcccttcctaaaccctcaatccaaacacaccc 7544137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 312 - 376
Target Start/End: Complemental strand, 13634776 - 13634712
Alignment:
Q  312 atttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    |||||||||| |||||| | ||||||| ||||||||||||| |||||||||||||||||||||||    
T  13634776 atttaaaaaagaaaagtaaaccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 13634712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 288 - 375
Target Start/End: Original strand, 1657968 - 1658055
Alignment:
Q  288 aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacacc 375  Q
    |||| |||||||| | ||| |||||||||||||  |||||| | ||||||| ||||||||||||| |||||||| |||||||||||||    
T  1657968 aaaaaacattttatagtgtccgtaatttaaaaatgaaaagtaaaccctcccctcccttcccctcctaaaccctccatccaaacacacc 1658055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 193 - 335
Target Start/End: Original strand, 6597845 - 6597984
Alignment:
Q  193 cttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaattta----a 288  Q
    ||||||||| |||  |||||| |||||||||||||  ||||||||| ||||| |||||| ||||||||| ||||||       ||||||||||||    |    
T  6597845 cttttttaaattacggacattgtaaaatgattttttgaaaattgaaataacaacatgataaatgatcatataatac-------acacttaatttatttta 6597937  T
Q  289 aaagacattttacattgttcgtaatttaaaaaataaaagtgagccct 335  Q
    ||| | |||||||||| ||| ||||||||||||||||| ||||||||    
T  6597938 aaaaatattttacattattcataatttaaaaaataaaaatgagccct 6597984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 213 - 372
Target Start/End: Complemental strand, 11437108 - 11436944
Alignment:
Q  213 tataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaatttaaaaagacat------tttacattgt 306  Q
    ||||||||| ||||||||||||| || |||||||  ||| ||||||| | |||||||||||  ||  || ||||||||| | ||      | || |||||    
T  11437108 tataaaatgttttttaaaaaattaaaataacagcgcgataaatgatcgtataatacttcaatcac-gtttatttaaaaataaataaaatatatatattgt 11437010  T
Q  307 tcgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacac 372  Q
     ||||||||||||||  ||||| ||||||||  ||||||||||||| |||||||||||||||||||    
T  11437009 ccgtaatttaaaaaaggaaagtaagccctcctctcccttcccctcctaaaccctcaatccaaacac 11436944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 184 - 285
Target Start/End: Original strand, 10043055 - 10043156
Alignment:
Q  184 cttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaa 283  Q
    ||||| || |||| |||| ||| | |||||| | ||| |||| || ||||||||||||||| |||||| ||||||||| |||||||| ||||||||||||    
T  10043055 cttacttttctttcttaaattataaacattaaagaattatttctagaaaattgaattaacaacatgataaatgatcatataatactttaaaaacacttaa 10043154  T
Q  284 tt 285  Q
    ||    
T  10043155 tt 10043156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 295 - 376
Target Start/End: Original strand, 15858902 - 15858983
Alignment:
Q  295 attttacattgttcgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    ||||| |||||||||||||||| |||||||| ||||| | |||| ||||||| ||||| ||| ||||||| |||||||||||    
T  15858902 attttccattgttcgtaatttagaaaataaatgtgagtcatcccctcccttcacctcccaaagcctcaattcaaacacaccc 15858983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 308 - 376
Target Start/End: Complemental strand, 26414962 - 26414894
Alignment:
Q  308 cgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    |||||||||||||  |||||| | ||||||| ||||||| ||||| |||||||||||||||||||||||    
T  26414962 cgtaatttaaaaacgaaaagtaaaccctcccctcccttctcctcctaaaccctcaatccaaacacaccc 26414894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 314 - 373
Target Start/End: Original strand, 2550533 - 2550592
Alignment:
Q  314 ttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacaca 373  Q
    |||||||| |||||| | ||||||| ||||||||||||| ||||||||||||||||||||    
T  2550533 ttaaaaaagaaaagtaaaccctcccctcccttcccctcctaaaccctcaatccaaacaca 2550592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 313 - 376
Target Start/End: Complemental strand, 10476090 - 10476027
Alignment:
Q  313 tttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    ||||||||| |||||| | ||||| ||||||||||||||| ||||||||||| |||||||||||    
T  10476090 tttaaaaaagaaaagtaaaccctctcatcccttcccctcctaaaccctcaattcaaacacaccc 10476027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 293 - 376
Target Start/End: Original strand, 14245206 - 14245289
Alignment:
Q  293 acattttacattgttcgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    |||||| ||| ||| |||||||||||||  ||||   | ||||||| ||||||||||||| |||||||||||||||||||||||    
T  14245206 acatttcacagtgtccgtaatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 14245289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 209 - 287
Target Start/End: Original strand, 12036007 - 12036084
Alignment:
Q  209 acattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaattta 287  Q
    |||||||||||| ||| ||| |||||||||||| || |||||| ||| ||||| |||||||| ||||||||||||||||    
T  12036007 acattataaaattattattagaaaattgaatta-caacatgataaattatcatataatacttaaaaaacacttaattta 12036084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 307 - 376
Target Start/End: Original strand, 10476202 - 10476271
Alignment:
Q  307 tcgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    |||||||||||||| || |||| | | ||||| ||||||||||||| |||||||| ||||||||||||||    
T  10476202 tcgtaatttaaaaattataagtaaacactcccctcccttcccctcctaaaccctccatccaaacacaccc 10476271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 287 - 376
Target Start/End: Original strand, 14684638 - 14684727
Alignment:
Q  287 aaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    ||||| |||||||| ||||  ||||||| |||||| |||||| ||||||||  || || ||||||| ||||||| |||||||||||||||    
T  14684638 aaaaaaacattttatattgcccgtaattaaaaaaagaaaagtaagccctcctctctctgcccctcctaaaccctaaatccaaacacaccc 14684727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 305 - 373
Target Start/End: Complemental strand, 11756949 - 11756882
Alignment:
Q  305 gttcgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacaca 373  Q
    ||||||||||||||||||||||   | | ||||||||||| ||||||| ||||||||||||||||||||    
T  11756949 gttcgtaatttaaaaaataaaaacaaactctcccatccct-cccctcctaaaccctcaatccaaacaca 11756882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 332 - 376
Target Start/End: Complemental strand, 16938524 - 16938480
Alignment:
Q  332 ccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    ||||||| ||||||||||||| |||||||||||||||||||||||    
T  16938524 ccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 16938480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 288 - 372
Target Start/End: Original strand, 36363187 - 36363271
Alignment:
Q  288 aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacac 372  Q
    ||||||||||||| | | | |||||||||||||  |||||||| | ||| | ||||||||||||| |||||||| ||||||||||    
T  36363187 aaaagacattttatagtatccgtaatttaaaaatgaaaagtgaactctctcctcccttcccctcctaaaccctccatccaaacac 36363271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 333 - 376
Target Start/End: Original strand, 5688590 - 5688633
Alignment:
Q  333 cctcccatcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    |||||| ||||||||||||| |||||||||||||||||||||||    
T  5688590 cctcccttcccttcccctcctaaaccctcaatccaaacacaccc 5688633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 295 - 331
Target Start/End: Complemental strand, 6382393 - 6382357
Alignment:
Q  295 attttacattgttcgtaatttaaaaaataaaagtgag 331  Q
    |||||||||||||||| ||||||||||||||||||||    
T  6382393 attttacattgttcgtgatttaaaaaataaaagtgag 6382357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 376
Target Start/End: Complemental strand, 8502904 - 8502836
Alignment:
Q  308 cgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    |||||||||||||  |||||||| ||||||||||| ||||| ||  ||||| || ||||||||||||||    
T  8502904 cgtaatttaaaaatgaaaagtgaaccctcccatccattcccttcataaaccatccatccaaacacaccc 8502836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 306 - 370
Target Start/End: Original strand, 10043425 - 10043489
Alignment:
Q  306 ttcgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaac 370  Q
    |||||||||||||||| ||||||||| |||||| ||||||  ||||| ||||  |||||||||||    
T  10043425 ttcgtaatttaaaaaagaaaagtgagtcctcccctcccttttcctcctaaacaatcaatccaaac 10043489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 288 - 376
Target Start/End: Complemental strand, 15986713 - 15986625
Alignment:
Q  288 aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    ||||| ||||||| | |||  |||| |||||||| |||| | || |||||| ||||||||||||| ||||||||  |||||||||||||    
T  15986713 aaaagtcattttataatgtctgtaaattaaaaaagaaaattaagtcctcccctcccttcccctcctaaaccctctttccaaacacaccc 15986625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 340 - 376
Target Start/End: Original strand, 20147077 - 20147113
Alignment:
Q  340 tcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    ||||||||||||| |||||||||||||||||||||||    
T  20147077 tcccttcccctcctaaaccctcaatccaaacacaccc 20147113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 309 - 376
Target Start/End: Original strand, 10204752 - 10204819
Alignment:
Q  309 gtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    |||| |||||||| |||||| || |||||| ||||||||||||| |||| |||  |||||||||||||    
T  10204752 gtaaattaaaaaagaaaagtaagtcctcccctcccttcccctcctaaactctctttccaaacacaccc 10204819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 309 - 376
Target Start/End: Complemental strand, 40815365 - 40815298
Alignment:
Q  309 gtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    ||||||||||||| |||||| |  |||| | ||||||||||||| ||| | |||||||||||||||||    
T  40815365 gtaatttaaaaaagaaaagtaaatcctctcttcccttcccctcctaaatcttcaatccaaacacaccc 40815298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 310 - 376
Target Start/End: Complemental strand, 33744260 - 33744194
Alignment:
Q  310 taatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    |||||||||||| |||||| | ||||||| ||||||| || ||  ||||||| ||||||||||||||    
T  33744260 taatttaaaaaagaaaagtaaaccctcccctcccttctccgccttaaccctccatccaaacacaccc 33744194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 310 - 376
Target Start/End: Original strand, 34980987 - 34981053
Alignment:
Q  310 taatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    |||||||||||| |||||| || |||||| ||||||||||||  |||||||| ||  ||||||||||    
T  34980987 taatttaaaaaagaaaagtaagtcctcccctcccttcccctcttaaaccctccattaaaacacaccc 34981053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 376
Target Start/End: Original strand, 11437094 - 11437185
Alignment:
Q  288 aaaagacattttacattgttcgtaatttaaaaaataaaagtgagcc---ctcccatcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    |||| |||||||| | ||||| || ||||||||| |||||| || |   ||||| ||||||||||| | |||||||||||||||| ||||||    
T  11437094 aaaaaacattttatagtgttcctattttaaaaaagaaaagtaagtcgtcctcccttcccttccccttctaaaccctcaatccaaaaacaccc 11437185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 295 - 376
Target Start/End: Complemental strand, 12036018 - 12035937
Alignment:
Q  295 attttacattgttcgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    |||||| | ||||| |||||||||||| ||||   || |||||  ||||||||||||| ||||| || ||||||||||||||    
T  12036018 attttataatgttcataatttaaaaaagaaaaacaagtcctcctctcccttcccctcctaaaccatctatccaaacacaccc 12035937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 342 - 374
Target Start/End: Complemental strand, 14681505 - 14681473
Alignment:
Q  342 ccttcccctccaaaaccctcaatccaaacacac 374  Q
    ||||||||||| |||||||||||||||||||||    
T  14681505 ccttcccctcctaaaccctcaatccaaacacac 14681473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 340 - 376
Target Start/End: Complemental strand, 40305707 - 40305671
Alignment:
Q  340 tcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    ||||||||||||| |||||||| ||||||||||||||    
T  40305707 tcccttcccctcctaaaccctccatccaaacacaccc 40305671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 121; Significance: 7e-62; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 173 - 372
Target Start/End: Complemental strand, 33519257 - 33519053
Alignment:
Q  173 ggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttca 272  Q
    ||||||||||| |||| || ||| ||||| ||| |||||||||||||||||||||| ||||||||||||||| |||||| ||||||||| ||||||||||    
T  33519257 ggaggggagggattacttttcttctttaaattacagacattataaaatgatttttagaaaattgaattaacaacatgataaatgatcatataatacttca 33519158  T
Q  273 aaaacacttaattt-----aaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatcca 367  Q
    ||||||||||||||     ||||| |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||| |||| |||||    
T  33519157 aaaacacttaatttatttcaaaaaaacattttatattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaaacctccatcca 33519058  T
Q  368 aacac 372  Q
    |||||    
T  33519057 aacac 33519053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 208 - 376
Target Start/End: Complemental strand, 37926015 - 37925842
Alignment:
Q  208 gacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaa-----tttaaaaagacattttaca 302  Q
    |||||||||||||||| |||| ||||||||||||||| ||||||  ||||| || |||||||||||||||||||||     || ||||| ||||||||||    
T  37926015 gacattataaaatgatgtttagaaaattgaattaacaacatgattgatgatgatataatacttcaaaaacacttaatctatttaaaaaaaacattttaca 37925916  T
Q  303 ttgttcgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||||| |||||||||||||||||||||||    
T  37925915 ttgttcgtaatttaaaaaataaaagtgaaccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 37925842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 173 - 376
Target Start/End: Original strand, 36267588 - 36267796
Alignment:
Q  173 ggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttca 272  Q
    |||||||||||||||  || ||||||||| |||  || |||||||||||||||||| |||||||||| ||||  ||||| ||||||||| ||||||||||    
T  36267588 ggaggggagggcttagttttcttttttaaattacggatattataaaatgatttttagaaaattgaatcaacaatatgataaatgatcatataatacttca 36267687  T
Q  273 aaaacacttaattta-----aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatcca 367  Q
    |||||||||| | ||     |||| ||||||||||||| | |||||||||||||||||| ||||||||||| ||||||||||||| ||||||||||||||    
T  36267688 aaaacacttactatattttgaaaaaacattttacattggttgtaatttaaaaaataaaaatgagccctcccctcccttcccctcctaaaccctcaatcca 36267787  T
Q  368 aacacaccc 376  Q
    |||||||||    
T  36267788 aacacaccc 36267796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 164 - 376
Target Start/End: Complemental strand, 39646687 - 39646470
Alignment:
Q  164 gagggtttaggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgt 263  Q
    ||||||||||||||||| | || || ||  |||||||| |||  ||||||||||||||||||||| ||||||||||||||| ||||||  ||||| || |    
T  39646687 gagggtttaggaggggatgactcacttttattttttaaattacggacattataaaatgatttttagaaaattgaattaacaacatgattgatgatgatat 39646588  T
Q  264 aatacttcaaaaacacttaattta-----aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaacc 358  Q
    ||||||||||||||| ||||||||     |||| | |||||||||||||| |||||||||||||||||||||  |||||| |||||||| |||| |||||    
T  39646587 aatacttcaaaaacagttaatttattttaaaaatatattttacattgttcataatttaaaaaataaaagtgattcctcccctcccttcctctcctaaacc 39646488  T
Q  359 ctcaatccaaacacaccc 376  Q
     |||||||||||||||||    
T  39646487 gtcaatccaaacacaccc 39646470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 193 - 376
Target Start/End: Original strand, 28074158 - 28074351
Alignment:
Q  193 cttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaattta----- 287  Q
    ||||||||| |||  ||||||||||||||||||||| ||||||||||||||| | |||| ||||||||| |||||||||||||||||||||||||         
T  28074158 cttttttaaattacggacattataaaatgatttttagaaaattgaattaacaacctgataaatgatcatataatacttcaaaaacacttaatttatttaa 28074257  T
Q  288 ---aaaagacattttacattgttcgtaatttaaa--aaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
       |||| |||||||||||||||||| ||| |||  |||||||||||| ||||||| | |||||| |||| |||||||||||||||||||||||    
T  28074258 aacaaaaaacattttacattgttcgtgattaaaaataaataaaagtgatccctccccttccttcctctcctaaaccctcaatccaaacacaccc 28074351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 145 - 360
Target Start/End: Complemental strand, 48013740 - 48013520
Alignment:
Q  145 ttaagggtgtgtttgggaagagggtttaggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaaca 244  Q
    ||||||||||||||||   ||||| |||||||||||| |||||| || | ||||||| | | |||| ||||||||| ||||||| |||||||||||||||    
T  48013740 ttaagggtgtgtttggatggagggattaggaggggagagcttacttttcgtttttaaatcacagactttataaaataatttttagaaaattgaattaaca 48013641  T
Q  245 gcatgatcaatgatcatgt-aatacttcaaaaacacttaa-----tttaaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctccc 338  Q
     |||||| ||||||||| | |||  |||||||||||||||     |||||||| ||||||||||||||||||||||| ||||||||||| || | |||||    
T  48013640 acatgataaatgatcatatgaatttttcaaaaacacttaatttattttaaaaaaacattttacattgttcgtaattt-aaaaataaaagcgaacgctccc 48013542  T
Q  339 atcccttcccctccaaaaccct 360  Q
     ||||||||||||| |||||||    
T  48013541 ctcccttcccctcctaaaccct 48013520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 173 - 375
Target Start/End: Complemental strand, 37620983 - 37620776
Alignment:
Q  173 ggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttca 272  Q
    ||||||||||| || | || ||||||||| |||  ||||||||||||||||||||  |||||||||||| || |||||| || ||| || ||||||||||    
T  37620983 ggaggggagggtttgcttttcttttttaaattatggacattataaaatgatttttggaaaattgaattatcaacatgataaaagattatataatacttca 37620884  T
Q  273 aaaacacttaattta-----aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatcca 367  Q
    |||||| ||||||||     ||||  ||||||||||||||| |||||| ||||  |||||||| | ||||| ||||||||||||| ||||||||||||||    
T  37620883 aaaacatttaatttattttaaaaaatcattttacattgttcataatttgaaaataaaaagtgaactctcccctcccttcccctcccaaaccctcaatcca 37620784  T
Q  368 aacacacc 375  Q
    ||||||||    
T  37620783 aacacacc 37620776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 178 - 374
Target Start/End: Complemental strand, 35422168 - 35421967
Alignment:
Q  178 ggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaac 277  Q
    |||||| |||| || |||||| || |||  ||||||||||||| ||||||| ||||||||||||||| ||| || ||| ||||| | |||||||||||||    
T  35422168 ggagggtttacttttctttttaaaattacggacattataaaataatttttagaaaattgaattaacaacataataaataatcatatgatacttcaaaaac 35422069  T
Q  278 acttaa-----tttaaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacac 372  Q
    ||||||     |||||||| ||||||||||||||| |||||||||||||||||| | || | ||   ||||||| ||||  ||| |||||||||||||||    
T  35422068 acttaatttattttaaaaaaacattttacattgtttgtaatttaaaaaataaaaataagtcatcttctcccttcacctcttaaatcctcaatccaaacac 35421969  T
Q  373 ac 374  Q
    ||    
T  35421968 ac 35421967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 173 - 374
Target Start/End: Original strand, 31364080 - 31364285
Alignment:
Q  173 ggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttca 272  Q
    ||||||||| |||||| || ||||| ||| |||  ||||||||||||||||||| | |||||||||| |||  ||| |   |||||||| ||||||||||    
T  31364080 ggaggggagagcttacttttcttttctaaattacggacattataaaatgattttaagaaaattgaatcaacgacataa---atgatcatataatacttca 31364176  T
Q  273 aaaacac---ttaatttaaaaagacattttacattgttcgtaatttaaaaaata------aaagtgagccctcccatcccttcccctccaaaaccctcaa 363  Q
    |||||||   ||| |||||||| |||||||||||||||| ||||||||||||||      ||||| | ||||||  ||||||||||||| ||||||||||    
T  31364177 aaaacacaacttattttaaaaaaacattttacattgttcctaatttaaaaaataaaaaataaagtaaaccctcc--tcccttcccctcctaaaccctcaa 31364274  T
Q  364 tccaaacacac 374  Q
    |||||||||||    
T  31364275 tccaaacacac 31364285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 168 - 374
Target Start/End: Complemental strand, 21857560 - 21857350
Alignment:
Q  168 gtttaggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaata 267  Q
    |||||||||| |||| ||||| || || ||||||||   | |||||||||||||||||||| ||||||||||||||| |||||| |||||||||  ||||    
T  21857560 gtttaggaggagaggacttacttttctcttttaattacga-acattataaaatgatttttagaaaattgaattaacaacatgataaatgatcatacaata 21857462  T
Q  268 cttcaaaaacacttaa-----tttaaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctca 362  Q
     |||||||||||||||     ||||||||   |||||| ||||||| ||||||||||||||||| ||| | |||   ||||||||||| | ||||| ||     
T  21857461 tttcaaaaacacttaatttattttaaaaaaggattttatattgttcttaatttaaaaaataaaaatgaactctctactcccttccccttctaaaccttcg 21857362  T
Q  363 atccaaacacac 374  Q
    ||||||||||||    
T  21857361 atccaaacacac 21857350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 173 - 376
Target Start/End: Original strand, 48881593 - 48881792
Alignment:
Q  173 ggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttca 272  Q
    |||||||| ||||||| || ||||||||| |||  ||||||||||||| ||||| | ||||||||||||||| |||||| |||||| || |||| |||||    
T  48881593 ggaggggatggcttacttttcttttttaaattacggacattataaaataattttcagaaaattgaattaacaacatgataaatgattatataatgcttca 48881692  T
Q  273 aaaacacttaa------tttaaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatcc 366  Q
    |||| ||||||      |||||||| ||||||||| ||||| |||||||||||| |||||||||           ||||||||||| |||||||||||||    
T  48881693 aaaatacttaatttatttttaaaaaaacattttacgttgtttgtaatttaaaaattaaaagtga----------accttcccctcctaaaccctcaatcc 48881782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 230 - 376
Target Start/End: Original strand, 12670928 - 12671079
Alignment:
Q  230 aaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaattta-----aaaagacattttacattgttcgtaatttaaaaaataa 324  Q
    ||||||||||||||| |||||| ||||||||| ||||||||||||||||||||||| |     |||| |||||| |||||||||||| ||||||||||||    
T  12670928 aaaattgaattaacaacatgataaatgatcatataatacttcaaaaacacttaattcatttacaaaaaacatttcacattgttcgtagtttaaaaaataa 12671027  T
Q  325 aagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    ||||||| | | || ||  || | |||| ||| |||||||||||||||||||    
T  12671028 aagtgagtctttccctctgtttcactcctaaaacctcaatccaaacacaccc 12671079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 210 - 375
Target Start/End: Complemental strand, 16833867 - 16833684
Alignment:
Q  210 cattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaattt----------------aaaaaga 293  Q
    |||||||| || ||||||| ||||||||||||| | |||||| ||||||||||||||||||||||||||||||||||                ||||| |    
T  16833867 cattataatataatttttataaaattgaattaataacatgataaatgatcatgtaatacttcaaaaacacttaatttttttttaaaaaaaaaaaaaaaaa 16833768  T
Q  294 cattttacattgttcgtaatttaaaaaataaaagtgag-ccct-cccatcccttcccctccaaaaccctcaatccaaacacacc 375  Q
    ||||||||||||||||||||||||||||||||||| || | || | |||||||| |||||  ||||||||||||||||||||||    
T  16833767 cattttacattgttcgtaatttaaaaaataaaagtaagtctctactcatccctttccctcttaaaccctcaatccaaacacacc 16833684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 202 - 376
Target Start/End: Complemental strand, 8122328 - 8122145
Alignment:
Q  202 tttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaat----acttcaaaaacacttaattta-----aaaag 292  Q
    |||| |||||||||||||| ||||||| |||||||||||||||  ||||| ||| ||||| ||||    |||||||||||| ||||||||     |||      
T  8122328 tttatagacattataaaataatttttagaaaattgaattaacaagatgataaattatcatataattaatacttcaaaaacaattaatttattttaaaaca 8122229  T
Q  293 acattttacattgttcgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    | |||||| || ||||||||||||||||||||||||||| | |||| ||||||| ||||| |||  |||||| |||||||||||    
T  8122228 atattttatatggttcgtaatttaaaaaataaaagtgagtcttcccctcccttctcctcctaaattctcaattcaaacacaccc 8122145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 148 - 286
Target Start/End: Original strand, 23116269 - 23116408
Alignment:
Q  148 agggtgtgtttgggaagagggtttaggaggggagggcttacattccttttttaatttaaagacattataaaa-tgatttttaaaaaattgaattaacagc 246  Q
    |||||||||||||   |||||||||||| |||||||||||| || ||||||||| ||| ||||| ||||||| || || ||||||||||||| || || |    
T  23116269 agggtgtgtttggatggagggtttaggaagggagggcttacttttcttttttaaattacagacactataaaagtgtttattaaaaaattgaaatagcaac 23116368  T
Q  247 atgatcaatgatcatgtaatacttcaaaaacacttaattt 286  Q
    ||||| |||||| || |||||||||||  |||||||||||    
T  23116369 atgataaatgattatataatacttcaatcacacttaattt 23116408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 212 - 321
Target Start/End: Original strand, 3215934 - 3216048
Alignment:
Q  212 ttataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaattta-----aaaagacattttacattgt 306  Q
    ||||||||||||||||| |||||||||||||||  ||||| ||||||||| |||||||||| ||| |||| |||||     |||| ||||||||||||||    
T  3215934 ttataaaatgatttttagaaaattgaattaacaatatgataaatgatcatataatacttcataaatacttgatttattttgaaaaaacattttacattgt 3216033  T
Q  307 tcgtaatttaaaaaa 321  Q
    || ||||||||||||    
T  3216034 tcataatttaaaaaa 3216048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 263 - 376
Target Start/End: Original strand, 12682854 - 12682972
Alignment:
Q  263 taatacttcaaaaacacttaattta-----aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaac 357  Q
    |||||||||||||||||||||||||     |||| ||||||||||||||||||| ||||||||||||||||||||| | || ||  || | |||| |||     
T  12682854 taatacttcaaaaacacttaatttatttaaaaaatacattttacattgttcgtagtttaaaaaataaaagtgagcctttccctctgtttcgctcctaaaa 12682953  T
Q  358 cctcaatccaaacacaccc 376  Q
    |||||||||||||||||||    
T  12682954 cctcaatccaaacacaccc 12682972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 195 - 348
Target Start/End: Complemental strand, 48015394 - 48015239
Alignment:
Q  195 tttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaattt------aa 288  Q
    ||||||| ||| |||| ||||||||| ||||||  ||||||||||||||| |||||| ||||||||| ||||  ||||||||||||||||||      ||    
T  48015394 tttttaaattacagactttataaaataatttttggaaaattgaattaacaacatgataaatgatcatataatttttcaaaaacacttaatttatttaaaa 48015295  T
Q  289 aaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccatcccttccc 348  Q
    ||| ||||||||||||    ||||||||||| ||||||| || | ||||| |||||||||    
T  48015294 aaaaacattttacatt----gtaatttaaaagataaaagcgaacgctcccctcccttccc 48015239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 193 - 331
Target Start/End: Complemental strand, 3143673 - 3143526
Alignment:
Q  193 cttttttaatttaaagacattataaaatgatttttaaaaaattgaattaa----cagcatgatcaatgatcatgtaatacttcaaaaacacttaa----- 283  Q
    ||||||||| |||| ||||||||||||| |||||||||||||||||||||    ||  ||||| ||||||||| |||||||||||||| ||||||         
T  3143673 cttttttaaattaatgacattataaaataatttttaaaaaattgaattaattaacaaaatgataaatgatcatataatacttcaaaaaaacttaatttat 3143574  T
Q  284 tttaaaaagacattttacattgttcgtaatttaaaaaataaaagtgag 331  Q
    |||| ||| | |||||||||||||  |||||||||||| |||| ||||    
T  3143573 tttataaaaatattttacattgtttataatttaaaaaaaaaaattgag 3143526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 308 - 376
Target Start/End: Original strand, 39856040 - 39856108
Alignment:
Q  308 cgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    |||||||||||||| |||||| | ||||||| ||||||||||||| |||||||||||||||||||||||    
T  39856040 cgtaatttaaaaaagaaaagtaaaccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 39856108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 294 - 376
Target Start/End: Complemental strand, 28074186 - 28074104
Alignment:
Q  294 cattttacattgttcgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    ||||||| | ||| |||||||||||||| |||||||||  ||||| ||||||||||||| ||||| |||||||||||||||||    
T  28074186 cattttataatgtccgtaatttaaaaaagaaaagtgagttctcccctcccttcccctcctaaaccttcaatccaaacacaccc 28074104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 295 - 376
Target Start/End: Complemental strand, 48881640 - 48881559
Alignment:
Q  295 attttacattgttcgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    |||||| | ||| |||||||||||||| |||||| |||| |||| ||||||||||||| |||||||| ||||||||||||||    
T  48881640 attttataatgtccgtaatttaaaaaagaaaagtaagccatcccctcccttcccctcctaaaccctccatccaaacacaccc 48881559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 177 - 273
Target Start/End: Original strand, 30592292 - 30592388
Alignment:
Q  177 gggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaa 273  Q
    |||||||||||| || ||||||||| ||| ||||| |||||||||||||||||||||||||| |||    ||||| ||| ||||| |||||||||||    
T  30592292 gggagggcttacttttcttttttaaattacagacactataaaatgatttttaaaaaattgaaataatcatatgataaataatcatataatacttcaa 30592388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 308 - 376
Target Start/End: Complemental strand, 36267622 - 36267554
Alignment:
Q  308 cgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    |||||||||||||| |||| | ||||||||| ||||||||||||| |||||||| ||||||||||||||    
T  36267622 cgtaatttaaaaaagaaaactaagccctcccctcccttcccctcctaaaccctccatccaaacacaccc 36267554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 308 - 376
Target Start/End: Original strand, 31571645 - 31571713
Alignment:
Q  308 cgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    |||||||||||||| |||||| | | ||||| || |||||||||| |||||||||||||||||||||||    
T  31571645 cgtaatttaaaaaagaaaagtaaactctcccctcgcttcccctcctaaaccctcaatccaaacacaccc 31571713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 284 - 376
Target Start/End: Complemental strand, 47390948 - 47390856
Alignment:
Q  284 tttaaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    |||| ||| |||| ||| || |||| |||||||||||| |||||| | ||||||  ||||||||||||| || ||||||||||||||||||||    
T  47390948 tttagaaaaacatgttatatagttcataatttaaaaaagaaaagtaaaccctccactcccttcccctcctaacccctcaatccaaacacaccc 47390856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 305 - 376
Target Start/End: Original strand, 1051670 - 1051741
Alignment:
Q  305 gttcgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    ||||||||||||||||| |||| | |  |||| | ||||||||||||| |||||||||||||||||||||||    
T  1051670 gttcgtaatttaaaaaagaaaaataaatcctctcctcccttcccctcctaaaccctcaatccaaacacaccc 1051741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 309 - 376
Target Start/End: Original strand, 33519224 - 33519291
Alignment:
Q  309 gtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    |||||||||| || |||||| | ||||||| ||||||||||||| |||||||| ||||||||||||||    
T  33519224 gtaatttaaagaagaaaagtaatccctcccctcccttcccctcctaaaccctccatccaaacacaccc 33519291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 184 - 287
Target Start/End: Original strand, 2087785 - 2087892
Alignment:
Q  184 cttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaa----tgatcatgtaatacttcaaaaacac 279  Q
    ||||| || ||||||||| |||  || |||||||||| |||||||||||| |||||||||| |||||| ||    ||||||| ||||||||||||||||     
T  2087785 cttacttttcttttttaaattacggatattataaaataatttttaaaaaaatgaattaacaacatgataaataattgatcatataatacttcaaaaacat 2087884  T
Q  280 ttaattta 287  Q
    | ||||||    
T  2087885 taaattta 2087892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 284 - 374
Target Start/End: Original strand, 18795746 - 18795835
Alignment:
Q  284 tttaaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacac 374  Q
    |||||||| |||||||| |||||||||||||||||||| ||||   |||| |||| | ||||||||| | |||| ||||||||||||||||    
T  18795746 tttaaaaaaacattttatattgttcgtaatttaaaaaagaaaatcaagccttcccct-ccttccccttctaaactctcaatccaaacacac 18795835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 246 - 374
Target Start/End: Original strand, 33655216 - 33655349
Alignment:
Q  246 catgatcaatgatcatgtaatacttcaaaaacacttaatttaa-----aaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccat 340  Q
    |||||| ||||||||| |||||||||||  ||||||||||||      ||| |||| ||| || |  | |||||||||||| |||||| | ||||| | |    
T  33655216 catgataaatgatcatataatacttcaatcacacttaatttattttagaaaaacatgttatatagcccataatttaaaaaagaaaagtaaaccctcgcct 33655315  T
Q  341 cccttcccctccaaaaccctcaatccaaacacac 374  Q
    | |||||||||| |||||||||||||||||||||    
T  33655316 ctcttcccctcctaaaccctcaatccaaacacac 33655349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 284 - 376
Target Start/End: Original strand, 13771097 - 13771189
Alignment:
Q  284 tttaaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    |||||||| |||| ||| || || |||||||||||||  |||||| | | ||| | ||||||||||||| |||||||||||| ||||||||||    
T  13771097 tttaaaaaaacatgttatatagtccgtaatttaaaaacgaaaagtaaactctcacctcccttcccctcctaaaccctcaatctaaacacaccc 13771189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 309 - 376
Target Start/End: Complemental strand, 4833599 - 4833532
Alignment:
Q  309 gtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    ||||||||||||  |||||| | ||||||| ||||||||||||| |||||||| ||||||||| ||||    
T  4833599 gtaatttaaaaatgaaaagtaaaccctcccctcccttcccctcctaaaccctccatccaaacataccc 4833532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 309 - 376
Target Start/End: Complemental strand, 30592321 - 30592254
Alignment:
Q  309 gtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    ||||||||||||| |||||| ||||||||| |||||| |||||| ||| |||| ||||||| ||||||    
T  30592321 gtaatttaaaaaagaaaagtaagccctcccttccctttccctcctaaatcctccatccaaatacaccc 30592254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 293 - 376
Target Start/End: Complemental strand, 40196616 - 40196533
Alignment:
Q  293 acattttacattgttcgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    |||||||| | ||| ||||||| |||||  |||||| | ||||||  ||||||||||||| |||||||| ||||||||||||||    
T  40196616 acattttatagtgtccgtaattcaaaaatgaaaagtaaaccctcctctcccttcccctcccaaaccctccatccaaacacaccc 40196533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 302 - 376
Target Start/End: Complemental strand, 41497032 - 41496958
Alignment:
Q  302 attgttcgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    ||||| |||||||||||||  |||||| |  | |||| ||||||||||||| |||||||| ||||||||||||||    
T  41497032 attgtccgtaatttaaaaataaaaagtaaatcatcccctcccttcccctcctaaaccctccatccaaacacaccc 41496958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 295 - 376
Target Start/End: Complemental strand, 13771030 - 13770949
Alignment:
Q  295 attttacattgttcgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    |||||| | ||| |||||||||||||  | |||| |  |||||| ||||||||||||| ||| |||||||||||||||||||    
T  13771030 attttatagtgtccgtaatttaaaaataataagtaaatcctcccctcccttcccctcctaaatcctcaatccaaacacaccc 13770949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 146 - 287
Target Start/End: Complemental strand, 17853106 - 17852966
Alignment:
Q  146 taagggtgtgtttgggaagagggtttaggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacag 245  Q
    |||||||||||||||   ||||||||||||||||||||||||| || | ||||||| |||    || ||| ||| | ||||||||||  | || |||||     
T  17853106 taagggtgtgtttggatggagggtttaggaggggagggcttacttttcatttttaaattacgagcactatgaaaag-tttttaaaaagataaaataacaa 17853008  T
Q  246 catgatcaatgatcatgtaatacttcaaaaacacttaattta 287  Q
    |||||| || |||||| |||||| ||||  ||||||||||||    
T  17853007 catgataaacgatcatataatacctcaatcacacttaattta 17852966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 376
Target Start/End: Complemental strand, 4835548 - 4835480
Alignment:
Q  308 cgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    |||||||||||||| |||||| ||| | ||| |||||| | |||| |||||||||||| ||||||||||    
T  4835548 cgtaatttaaaaaagaaaagtaagcacacccctccctttctctcctaaaccctcaatctaaacacaccc 4835480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 304 - 376
Target Start/End: Original strand, 18231757 - 18231829
Alignment:
Q  304 tgttcgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    |||| ||||||||||||  |||||| |  |||||| ||||||||||||| |||| ||| ||||||||||||||    
T  18231757 tgtttgtaatttaaaaatgaaaagtaaatcctcccctcccttcccctcctaaacgctccatccaaacacaccc 18231829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 333 - 376
Target Start/End: Complemental strand, 25887236 - 25887193
Alignment:
Q  333 cctcccatcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    |||||| ||||||||||||  |||||||||||||||||||||||    
T  25887236 cctcccctcccttcccctcataaaccctcaatccaaacacaccc 25887193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 297 - 364
Target Start/End: Original strand, 48147404 - 48147471
Alignment:
Q  297 tttacattgttcgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaat 364  Q
    |||||||| || |||||||||||||||||||||||| ||| | || ||| |||||| |||| ||||||    
T  48147404 tttacattatttgtaatttaaaaaataaaagtgagctctctcctctctttccctcctaaactctcaat 48147471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 311 - 376
Target Start/End: Complemental strand, 40282263 - 40282198
Alignment:
Q  311 aatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    ||||||||||| ||||   | ||||||  ||||||||||||| |||||||||||||||||| ||||    
T  40282263 aatttaaaaaagaaaatcaaaccctcctctcccttcccctcctaaaccctcaatccaaacataccc 40282198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095 (Bit Score: 120; Significance: 3e-61; HSPs: 1)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 145 - 337
Target Start/End: Complemental strand, 8390 - 8187
Alignment:
Q  145 ttaagggtgtgttt-gggaagagggtttaggaggggaggg-----cttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaa 238  Q
    |||||||||||||| |||||||| ||||||||||||||||     ||||||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  8390 ttaagggtgtgtttagggaagagagtttaggaggggaggggagggcttacattccttttttaatttaaagacgttataaaattatttttaaaaaattgaa 8291  T
Q  239 ttaacagcatgatcaatgatcatgtaatacttcaaaaacacttaat-----ttaaaaagacattttacattgttcgtaatttaaaaaataaaagtgagcc 333  Q
    |||||| |||||| ||||||||| |||||||||||||||| |||||     |||||||||||||| |||||||||||||||||||||||||||||||||     
T  8290 ttaacaacatgattaatgatcatataatacttcaaaaacagttaatttatcttaaaaagacatttcacattgttcgtaatttaaaaaataaaagtgagct 8191  T
Q  334 ctcc 337  Q
    ||||    
T  8190 ctcc 8187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 112; Significance: 2e-56; HSPs: 47)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 194 - 376
Target Start/End: Complemental strand, 31061547 - 31061360
Alignment:
Q  194 ttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaattta-----a 288  Q
    |||||||| ||| |||||||||||| ||| ||||  ||||||||||||||| |||||| ||||||||| ||||| |||||||||||||||||||     |    
T  31061547 ttttttaaattacagacattataaagtgactttttgaaaattgaattaacaacatgataaatgatcatataatatttcaaaaacacttaatttattttaa 31061448  T
Q  289 aaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| |||||||||||||||||    
T  31061447 aaacacattttacattgttcgtaatttaaaaaataaaagtgagccctcccatcctttcccctcctaaaccttcaatccaaacacaccc 31061360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 193 - 376
Target Start/End: Complemental strand, 45257496 - 45257308
Alignment:
Q  193 cttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaattta----- 287  Q
    ||||||||| |||  || |||||||||||||||||  |||||||||||||||  ||||| ||||||||| |||||||||||||||||||||||||         
T  45257496 cttttttaaattacggatattataaaatgattttttgaaaattgaattaacaatatgataaatgatcatataatacttcaaaaacacttaatttatttta 45257397  T
Q  288 aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    | || |||||||||||||||||||||||| |||||||||||||| |||||| ||| ||||||||| |||| ||||||||||||||||||    
T  45257396 agaaaacattttacattgttcgtaatttataaaataaaagtgagtcctcccttcctttcccctcctaaactctcaatccaaacacaccc 45257308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 184 - 376
Target Start/End: Original strand, 42296349 - 42296546
Alignment:
Q  184 cttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaa 283  Q
    ||||| || ||||||||| |||  || |||||||||||| ||||| |||| |||||||||| ||| || ||||||||| ||||| || ||||||||||||    
T  42296349 cttacttttcttttttaaattacggatattataaaatgaattttagaaaaatgaattaacaacataataaatgatcatataataatttaaaaacacttaa 42296448  T
Q  284 tt-----taaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    ||     |||||| | ||||||||| |||||||||||||||||||||||||| ||||| | ||||||||||||| || ||||||||||||||||||||    
T  42296449 ttcattttaaaaaaatattttacatcgttcgtaatttaaaaaataaaagtgaaccctctcctcccttcccctcctaatccctcaatccaaacacaccc 42296546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 208 - 343
Target Start/End: Original strand, 15085770 - 15085911
Alignment:
Q  208 gacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaattta------aaaagacattttac 301  Q
    ||||||||||||||||||||| ||||||||||||||| | |||| ||||||||| |||||||||||||||||||||||||      |||| | ||||||     
T  15085770 gacattataaaatgatttttagaaaattgaattaacaacttgataaatgatcatataatacttcaaaaacacttaatttattttttaaaaaatattttat 15085869  T
Q  302 attgttcgtaatttaaaaaataaaagtgagccctcccatccc 343  Q
    |||||||||||||||||||||||||| |||||||||||||||    
T  15085870 attgttcgtaatttaaaaaataaaagcgagccctcccatccc 15085911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 215 - 370
Target Start/End: Original strand, 31928121 - 31928286
Alignment:
Q  215 taaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaattta----------aaaagacattttacatt 304  Q
    |||||||||||||  ||||||||||||| | |||||| ||||||||| |||||||||||||||||||||||||          |||| ||||||||||||    
T  31928121 taaaatgatttttttaaaattgaattaataacatgataaatgatcatataatacttcaaaaacacttaatttatttaaaaaaaaaaaaacattttacatt 31928220  T
Q  305 gttcgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaac 370  Q
    ||| |||||||||||| ||||||||||||||||| ||||||||||||| |||||||| ||||||||    
T  31928221 gtttgtaatttaaaaattaaaagtgagccctcccttcccttcccctcctaaaccctcgatccaaac 31928286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 215 - 369
Target Start/End: Complemental strand, 33265773 - 33265615
Alignment:
Q  215 taaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaattta----aaaagacattttacattgttcgt 310  Q
    |||||||||||||  |||||||||||||||  ||||| ||||||||| |||||||||||||||||||||||||    |||| |  |||||||||||||||    
T  33265773 taaaatgattttttgaaaattgaattaacaatatgataaatgatcatataatacttcaaaaacacttaatttattttaaaaaatgttttacattgttcgt 33265674  T
Q  311 aatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaa 369  Q
    |||||||||||||||| |||| | || | ||||||||||||| ||||||||||||||||    
T  33265673 aatttaaaaaataaaaatgagtcatcgcctcccttcccctcctaaaccctcaatccaaa 33265615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 212 - 375
Target Start/End: Original strand, 3094427 - 3094595
Alignment:
Q  212 ttataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacac-----ttaatttaaaaagacattttacattgt 306  Q
    ||||||||||||| ||| ||||||||||||||| |||||| ||| ||||| |||||||||||||||||     ||| |||| ||| ||||||||||| ||    
T  3094427 ttataaaatgattcttagaaaattgaattaacaacatgataaataatcatataatacttcaaaaacacgaaatttattttagaaaaacattttacatagt 3094526  T
Q  307 tcgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacacc 375  Q
    | ||||||||||||||||||||||| | |||| |||||| || ||| ||||||||||||||||||||||    
T  3094527 ttgtaatttaaaaaataaaagtgagtcttcccctccctttccttcctaaaccctcaatccaaacacacc 3094595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 194 - 376
Target Start/End: Original strand, 1052811 - 1053000
Alignment:
Q  194 ttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaattta------ 287  Q
    |||||||| |||  || |||||||||| ||||||| ||||||||||||||| |||||| ||||||| | ||||| |||||||||| ||||||||          
T  1052811 ttttttaaattatcgatattataaaataatttttagaaaattgaattaacaacatgataaatgatcgtataatatttcaaaaacatttaatttatttaaa 1052910  T
Q  288 aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccatcccttccc-ctccaaaaccctcaatccaaacacaccc 376  Q
    |||| |||||||||||||||||||||||||||||||||||||||| ||||  ||| ||||| |||| |||| ||||||||||| ||||||    
T  1052911 aaaaaacattttacattgttcgtaatttaaaaaataaaagtgagctctcctctcctttcccgctcctaaactctcaatccaaatacaccc 1053000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 211 - 376
Target Start/End: Original strand, 2381060 - 2381230
Alignment:
Q  211 attataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaattta-----aaaagacattttacattg 305  Q
    |||||||||||| ||||| ||||||||||| ||| ||||||  ||||| || |||||||||||||||||||||||||     |||| |||||||||||||    
T  2381060 attataaaatgaattttagaaaattgaattgacaacatgattgatgatgatataatacttcaaaaacacttaatttattttaaaaaaacattttacattg 2381159  T
Q  306 ttcgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    ||||||||||||||||||||||||| | ||||| |||| | |||||  |||||| ||||||||| ||||||    
T  2381160 ttcgtaatttaaaaaataaaagtgaactctcccctcccattccctcataaacccacaatccaaatacaccc 2381230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 208 - 376
Target Start/End: Complemental strand, 34187751 - 34187576
Alignment:
Q  208 gacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgta--atacttcaaaaacacttaattta-----aaaagacatttta 300  Q
    ||||||||||||||||||||| ||||||||||||||| |||||| |||||| || ||  |||||||||||||||||||||||     | || |||| |||    
T  34187751 gacattataaaatgatttttagaaaattgaattaacaacatgataaatgattatatataatacttcaaaaacacttaatttattttaataaaacatctta 34187652  T
Q  301 cattgttcgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    | |||||||||||||||||| ||||||||| || |||| | |||||| |||| |||| ||||||||||||||||||    
T  34187651 cgttgttcgtaatttaaaaattaaaagtgaaccttccccttccttccactcctaaactctcaatccaaacacaccc 34187576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 196 - 328
Target Start/End: Complemental strand, 45098355 - 45098218
Alignment:
Q  196 ttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaa-----tttaaaa 290  Q
    |||||| ||| ||||||||||||||| ||||| |||||||||||||||| |||||| ||||||||| |||||||||||||||||||||     |||||||    
T  45098355 ttttaaattacagacattataaaatggtttttgaaaaattgaattaacaacatgataaatgatcatataatacttcaaaaacacttaatttattttaaaa 45098256  T
Q  291 agacattttacattgttcgtaatttaaaaaataaaagt 328  Q
    | |||||||||||| || ||||| ||||||||||||||    
T  45098255 atacattttacattatttgtaatgtaaaaaataaaagt 45098218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 195 - 328
Target Start/End: Complemental strand, 35325456 - 35325316
Alignment:
Q  195 tttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaattt-------a 287  Q
    ||||||| |||| ||||||||||||| ||||||||||||||||||||| | |||||| ||||||||| |||||||||||||| |||||||||       |    
T  35325456 tttttaaattaacgacattataaaataatttttaaaaaattgaattaataacatgataaatgatcatataatacttcaaaaatacttaatttattttaaa 35325357  T
Q  288 aaaagacattttacattgttcgtaatttaaaaaataaaagt 328  Q
    |||| | |||||||||||||||||||| |||||||||||||    
T  35325356 aaaatatattttacattgttcgtaattaaaaaaataaaagt 35325316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 255 - 376
Target Start/End: Original strand, 1270394 - 1270521
Alignment:
Q  255 tgatcatgtaatacttcaaaaacacttaattta------aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccatcccttccc 348  Q
    ||||||| ||| |||||||||||||||||||||      |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||  |    
T  1270394 tgatcatataacacttcaaaaacacttaatttatttaaaaaaaaacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttgtc 1270493  T
Q  349 ctccaaaaccctcaatccaaacacaccc 376  Q
    |||| ||| ||||||||||||| |||||    
T  1270494 ctcctaaatcctcaatccaaacgcaccc 1270521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 263 - 376
Target Start/End: Original strand, 17333936 - 17334055
Alignment:
Q  263 taatacttcaaaaacacttaattta-----aaaagacattttacattgttcgtaatttaaaa-aataaaagtgagccctcccatcccttcccctccaaaa 356  Q
    |||||||||||||||||||||||||     |||||||||||||||||||| |||| |||||| |||||||||||| |||||| | ||||||||||| |||    
T  17333936 taatacttcaaaaacacttaatttattttaaaaagacattttacattgtttgtaacttaaaaaaataaaagtgagtcctccccttccttcccctcctaaa 17334035  T
Q  357 ccctcaatccaaacacaccc 376  Q
    |||||||| |||| ||||||    
T  17334036 ccctcaattcaaaaacaccc 17334055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 169 - 281
Target Start/End: Original strand, 36052118 - 36052230
Alignment:
Q  169 tttaggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatac 268  Q
    |||||||||||| | ||||| || || |||||| ||| | |||||||||||||||||||| ||||||||||||||| ||| ||  |||||||| | ||||    
T  36052118 tttaggaggggacgacttacttttctattttaaattacatacattataaaatgatttttagaaaattgaattaacaacatcatacatgatcatatgatac 36052217  T
Q  269 ttcaaaaacactt 281  Q
    |||||||||||||    
T  36052218 ttcaaaaacactt 36052230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 208 - 285
Target Start/End: Original strand, 8554369 - 8554446
Alignment:
Q  208 gacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaatt 285  Q
    ||||||||||||| |||||| |||||||||||||||| |||||| ||||||| |  ||||||||||||||||| ||||    
T  8554369 gacattataaaataattttttaaaaattgaattaacatcatgataaatgatcgtacaatacttcaaaaacactcaatt 8554446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 254 - 326
Target Start/End: Complemental strand, 22356093 - 22356016
Alignment:
Q  254 atgatcatgtaatacttcaaaaacacttaat-----ttaaaaagacattttacattgttcgtaatttaaaaaataaaa 326  Q
    ||||| || ||||||||||||||||||||||     ||||||| ||||||||||||||||||||||||||||||||||    
T  22356093 atgatgatataatacttcaaaaacacttaatctattttaaaaaaacattttacattgttcgtaatttaaaaaataaaa 22356016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 181 - 286
Target Start/End: Complemental strand, 9313188 - 9313079
Alignment:
Q  181 gggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatc----atgtaatacttcaaaaa 276  Q
    |||||||| || | ||||||| ||| |||||||||||||||||||||  ||||||||||||||| | |||| |||||||    || | ||||||||||||    
T  9313188 gggcttacttttcctttttaaattacagacattataaaatgatttttcgaaaattgaattaacaacttgataaatgatcgatcatattatacttcaaaaa 9313089  T
Q  277 cacttaattt 286  Q
    ||||||||||    
T  9313088 cacttaattt 9313079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 308 - 376
Target Start/End: Original strand, 22356179 - 22356247
Alignment:
Q  308 cgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    |||||||||||||| |||| ||| ||||||| ||||||||||||| ||| |||||||||||||||||||    
T  22356179 cgtaatttaaaaaagaaaaatgaaccctcccctcccttcccctcctaaatcctcaatccaaacacaccc 22356247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 288 - 376
Target Start/End: Original strand, 23748250 - 23748338
Alignment:
Q  288 aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    ||||||||||| | | ||| |||| ||||||||  |||||||| ||||||| ||||||||||||| |||||||| ||||||||||||||    
T  23748250 aaaagacatttcatagtgtccgtagtttaaaaatgaaaagtgaaccctcccctcccttcccctcctaaaccctccatccaaacacaccc 23748338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 308 - 376
Target Start/End: Original strand, 36347716 - 36347784
Alignment:
Q  308 cgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    |||||||||||||| |||||| | | ||||| ||||||||||||| |||||||||||||||||||||||    
T  36347716 cgtaatttaaaaaagaaaagtaaactctcccttcccttcccctcctaaaccctcaatccaaacacaccc 36347784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 246 - 375
Target Start/End: Complemental strand, 16713628 - 16713494
Alignment:
Q  246 catgatcaatgatcatgtaatacttcaaaaacacttaattt-----aaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccat 340  Q
    |||||| |||||  || ||||||||||||||||| ||||||     ||||| | |||||| ||||| ||||||||||||| ||||| ||| |  |||| |    
T  16713628 catgataaatgaatatataatacttcaaaaacacataatttcttttaaaaaaatattttatattgtacgtaatttaaaaattaaaattgaactatccctt 16713529  T
Q  341 cccttcccctccaaaaccctcaatccaaacacacc 375  Q
    |||||||||||  |||||||||||| |||||||||    
T  16713528 cccttcccctcttaaaccctcaatcaaaacacacc 16713494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 211 - 320
Target Start/End: Complemental strand, 21502204 - 21502088
Alignment:
Q  211 attataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaattt-------aaaaagacattttacat 303  Q
    |||||||||| ||||| | ||||||| ||||||| || ||| |||| |||| ||||||||||||||||||||||||       ||||| | |||||| ||    
T  21502204 attataaaataattttaagaaaattgcattaacaacaagataaatggtcatataatacttcaaaaacacttaatttatttttaaaaaaaatattttatat 21502105  T
Q  304 tgttcgtaatttaaaaa 320  Q
    |||||||||||||||||    
T  21502104 tgttcgtaatttaaaaa 21502088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 174 - 276
Target Start/End: Complemental strand, 42813828 - 42813726
Alignment:
Q  174 gaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaa 273  Q
    ||||||| ||||||  || ||||||||| |||   |||||||||||||||||||| ||||||||||||||| | |||| ||| ||||| |||||||| ||    
T  42813828 gaggggatggcttatttttcttttttaaattacgaacattataaaatgatttttagaaaattgaattaacaacctgataaataatcatataatactttaa 42813729  T
Q  274 aaa 276  Q
    |||    
T  42813728 aaa 42813726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 311 - 376
Target Start/End: Original strand, 35736365 - 35736430
Alignment:
Q  311 aatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    ||||||||||  |||||||||||||||| ||||||| ||||| |||||||| ||||||||||||||    
T  35736365 aatttaaaaacgaaaagtgagccctcccctcccttcacctcctaaaccctccatccaaacacaccc 35736430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 312 - 376
Target Start/End: Complemental strand, 35736240 - 35736176
Alignment:
Q  312 atttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    |||||||||| |||| | | ||||||| ||||||||||||| |||||||||||||||||||||||    
T  35736240 atttaaaaaagaaaattaacccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 35736176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 253 - 376
Target Start/End: Complemental strand, 41778902 - 41778774
Alignment:
Q  253 aatgatcatgtaatacttcaaaaacacttaattta-----aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccatcccttcc 347  Q
    ||||||||| |||||||||||  ||||||||||||     |||| |||||||| | ||| | |||||||||  | |||||| | ||||||| |||||| |    
T  41778902 aatgatcatataatacttcaatcacacttaatttattttaaaaaaacattttatactgtccataatttaaagtacaaaagtaaaccctcccctccctttc 41778803  T
Q  348 cctccaaaaccctcaatccaaacacaccc 376  Q
    ||| | |||||||||||||||||||||||    
T  41778802 ccttctaaaccctcaatccaaacacaccc 41778774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 247 - 368
Target Start/End: Complemental strand, 887051 - 886927
Alignment:
Q  247 atgatcaatgatcatgtaatacttcaaaaacacttaattta-----aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccatc 341  Q
    ||||| ||||||||| |||||||||||  |||| |||||||     ||||  ||||||| |||||  ||||||||||||| |||||| ||||||||| |     
T  887051 atgataaatgatcatataatacttcaatcacacataatttattttaaaaaagcattttatattgt--gtaatttaaaaaagaaaagtaagccctccctta 886954  T
Q  342 ccttcccctccaaaaccctcaatccaa 368  Q
    ||||||||||| |||||||||| ||||    
T  886953 ccttcccctcctaaaccctcaacccaa 886927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 246 - 376
Target Start/End: Original strand, 15224802 - 15224937
Alignment:
Q  246 catgatcaatgatcatgtaatacttcaaaaacacttaatttaa-----aaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccat 340  Q
    |||||| ||||||||| |||||||||||  ||||||||||||      ||| |||| ||| || |  |||||||||||||| |||||| | || |||| |    
T  15224802 catgataaatgatcatataatacttcaatcacacttaatttattctagaaaaacatgttatatagcccgtaatttaaaaaagaaaagtaaaccatcccct 15224901  T
Q  341 cccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    |||||||||||| |||||||  ||||||||||||||    
T  15224902 cccttcccctcctaaacccttgatccaaacacaccc 15224937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 294 - 376
Target Start/End: Original strand, 42813781 - 42813863
Alignment:
Q  294 cattttacattgttcgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    ||||||| | |||||||||||||||||| |||| | |||| |||| || |||||||||| |||||||  ||||||||||||||    
T  42813781 cattttataatgttcgtaatttaaaaaagaaaaataagccatcccctctcttcccctcctaaacccttcatccaaacacaccc 42813863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 332 - 376
Target Start/End: Complemental strand, 17379891 - 17379847
Alignment:
Q  332 ccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    ||||||| ||||||||||||| |||||||||||||||||||||||    
T  17379891 ccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 17379847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 308 - 375
Target Start/End: Original strand, 36046377 - 36046443
Alignment:
Q  308 cgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacacc 375  Q
    |||||||||||||| |||||| | || |||| ||||||||||||  ||||||||||||||||||||||    
T  36046377 cgtaatttaaaaaacaaaagtaaacc-tcccctcccttcccctcataaaccctcaatccaaacacacc 36046443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 264 - 337
Target Start/End: Original strand, 23739882 - 23739960
Alignment:
Q  264 aatacttcaaaaacacttaattta-----aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcc 337  Q
    ||||||||||||||| ||||||||     |||| ||||||||| || |||||||||||||||||||| || ||||||||    
T  23739882 aatacttcaaaaacatttaatttattttaaaaaaacattttacttttttcgtaatttaaaaaataaatgttagccctcc 23739960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 309 - 375
Target Start/End: Complemental strand, 41841750 - 41841684
Alignment:
Q  309 gtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacacc 375  Q
    ||||||||||||| ||||   | |||||||||||||| |||||| ||| ||||||||||||||||||    
T  41841750 gtaatttaaaaaagaaaatcaaaccctcccatccctttccctcctaaatcctcaatccaaacacacc 41841684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 376
Target Start/End: Original strand, 887285 - 887352
Alignment:
Q  308 cgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    |||||||||||||| |||||| ||| ||||| ||||||||||||| ||||| || ||||| ||||||||    
T  887285 cgtaatttaaaaaagaaaagtaagcgctcccctcccttcccctcctaaaccttc-atccagacacaccc 887352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 294 - 338
Target Start/End: Original strand, 33265767 - 33265811
Alignment:
Q  294 cattttacattgttcgtaatttaaaaaataaaagtgagccctccc 338  Q
    ||||||||||||||| |||||||||||||||||| ||| ||||||    
T  33265767 cattttacattgttcataatttaaaaaataaaagcgagtcctccc 33265811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 283 - 338
Target Start/End: Original strand, 14196819 - 14196874
Alignment:
Q  283 atttaaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctccc 338  Q
    |||| |||| |||||||| | |||||||||||||||||| |||||| |||||||||    
T  14196819 attttaaaaaacattttatagtgttcgtaatttaaaaaagaaaagtaagccctccc 14196874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 308 - 374
Target Start/End: Complemental strand, 31795838 - 31795772
Alignment:
Q  308 cgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacac 374  Q
    |||||||||||||  |||||| || |||||| ||||||| ||||  |||||||| ||||||||||||    
T  31795838 cgtaatttaaaaacgaaaagtaagtcctcccctcccttcacctcataaaccctccatccaaacacac 31795772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 173 - 287
Target Start/End: Original strand, 31795804 - 31795918
Alignment:
Q  173 ggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttca 272  Q
    |||||||||| ||||| || | ||||||| |||  |||| ||| ||| | ||||| ||||| | || ||||| |||||| || |||||| ||||||||||    
T  31795804 ggaggggaggacttacttttcgtttttaaattacggacactatgaaaagtttttttaaaaaataaaataacaacatgataaacgatcatataatacttca 31795903  T
Q  273 aaaacacttaattta 287  Q
    |  ||||||||||||    
T  31795904 atcacacttaattta 31795918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 313 - 373
Target Start/End: Complemental strand, 2381057 - 2380996
Alignment:
Q  313 tttaaaaaataaaagtgagccctcccatccc-ttcccctccaaaaccctcaatccaaacaca 373  Q
    ||||||||| |||| |||| |||||| |||| ||||||||| |||||||| |||||||||||    
T  2381057 tttaaaaaagaaaaatgagtcctcccctccccttcccctcctaaaccctctatccaaacaca 2380996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 310 - 375
Target Start/End: Complemental strand, 8426946 - 8426881
Alignment:
Q  310 taatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacacc 375  Q
    ||||||||||| ||||||| | ||||||| ||||||||||||| |||| ||| || |||| |||||    
T  8426946 taatttaaaaattaaaagtaaaccctcccttcccttcccctcctaaactctccattcaaatacacc 8426881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 343 - 376
Target Start/End: Original strand, 17380051 - 17380084
Alignment:
Q  343 cttcccctccaaaaccctcaatccaaacacaccc 376  Q
    |||||||||| |||||||||||||||||||||||    
T  17380051 cttcccctcctaaaccctcaatccaaacacaccc 17380084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 308 - 376
Target Start/End: Original strand, 9631735 - 9631803
Alignment:
Q  308 cgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    |||||||||||||  |||||| | |||||   |||||| |||||| |||||||| ||||||||||||||    
T  9631735 cgtaatttaaaaacgaaaagttaaccctcttctccctttccctcctaaaccctccatccaaacacaccc 9631803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 231
Target Start/End: Original strand, 14187111 - 14187167
Alignment:
Q  175 aggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaa 231  Q
    |||||||||||||| || ||||||||| ||| | ||||||||||||| |||| ||||    
T  14187111 aggggagggcttacttttcttttttaaattataaacattataaaatgtttttgaaaa 14187167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 212 - 244
Target Start/End: Complemental strand, 22356173 - 22356141
Alignment:
Q  212 ttataaaatgatttttaaaaaattgaattaaca 244  Q
    ||||||||||||||||| |||||||||||||||    
T  22356173 ttataaaatgatttttagaaaattgaattaaca 22356141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 308 - 376
Target Start/End: Complemental strand, 36347610 - 36347542
Alignment:
Q  308 cgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    |||||| ||||||  |||||||| | ||| | ||||||||||||| |||||||  ||||||||||||||    
T  36347610 cgtaatataaaaatgaaaagtgaactctctcttcccttcccctcctaaacccttcatccaaacacaccc 36347542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 308 - 376
Target Start/End: Original strand, 45257482 - 45257550
Alignment:
Q  308 cgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    |||||||||||||| |||||| | || || | ||||||||| ||| ||| |||| ||||||||||||||    
T  45257482 cgtaatttaaaaaagaaaagtaaaccatctcctcccttcccatcctaaaacctccatccaaacacaccc 45257550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 110; Significance: 3e-55; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 173 - 376
Target Start/End: Original strand, 1085524 - 1085733
Alignment:
Q  173 ggaggggagggcttacatt-ccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttc 271  Q
    |||||||||| ||||| || |||||||||| |||  ||||||| ||||||||||||| ||||||||| |||||||||||| ||||||||| |||||||||    
T  1085524 ggaggggaggacttacttttccttttttaaattacggacattagaaaatgatttttagaaaattgaactaacagcatgataaatgatcatataatacttc 1085623  T
Q  272 aaaaacacttaa-----tttaaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatcc 366  Q
    ||||||||||||     |||||||| ||||||||||| ||||||||||||||||||||||||||| | || | ||||||||||||| |||||||| ||||    
T  1085624 aaaaacacttaatttattttaaaaaaacattttacatggttcgtaatttaaaaaataaaagtgagtcatctcctcccttcccctcctaaaccctctatcc 1085723  T
Q  367 aaacacaccc 376  Q
    ||||||||||    
T  1085724 aaacacaccc 1085733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 150 - 376
Target Start/End: Complemental strand, 33643499 - 33643269
Alignment:
Q  150 ggtgtgtttgggaagagggtttaggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatg 249  Q
    |||||||||||  |||||||||||||||||||   ||| ||| ||||||||| |||   ||||| |||||||||||||| ||||||||||||| |  |||    
T  33643499 ggtgtgtttggatagagggtttaggaggggagaattta-atttcttttttaaattatgaacattttaaaatgatttttagaaaattgaattaataatatg 33643401  T
Q  250 atcaatgatcatgtaatacttcaaaaacacttaattta-----aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccatccct 344  Q
    || ||||||||| |||||||||||||||||||||||||     |||| |||||||||||| |||||||||||||||||||||||||| | |||| |||||    
T  33643400 atgaatgatcatataatacttcaaaaacacttaatttattttaaaaaaacattttacatttttcgtaatttaaaaaataaaagtgagtcatcccttccct 33643301  T
Q  345 tcccctccaaaaccctcaatccaaacacaccc 376  Q
    |||||||| ||||| |||||| ||||||||||    
T  33643300 tcccctcctaaaccttcaatctaaacacaccc 33643269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 193 - 376
Target Start/End: Complemental strand, 35928001 - 35927815
Alignment:
Q  193 cttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaattta----a 288  Q
    ||||||||| ||| |||  ||||||||| ||||| | ||||||||||||||| |||||| ||||||||| |||||||||||||| ||||||||||    |    
T  35928001 cttttttaaattacagattttataaaataatttt-agaaaattgaattaacaacatgataaatgatcatataatacttcaaaaatacttaatttatttta 35927903  T
Q  289 aaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
     || |   |||||||||||| |||||||||||||||| |||||||||||| ||| ||||||||| ||| |||||||||||||||||||    
T  35927902 gaaaaatatttacattgttcataatttaaaaaataaatgtgagccctcccctccattcccctcctaaaacctcaatccaaacacaccc 35927815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 173 - 374
Target Start/End: Original strand, 40709327 - 40709532
Alignment:
Q  173 ggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttca 272  Q
    |||| ||||| ||||| || ||||||||| |||   | |||||||||| ||||||| |||||| |||||||   ||||| ||||||||| ||||||||||    
T  40709327 ggagaggaggacttacttttcttttttaaattacgaatattataaaataatttttagaaaattaaattaacgatatgataaatgatcatataatacttca 40709426  T
Q  273 aaaacacttaattta-----aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatcca 367  Q
    ||||||||||||||      |||| || ||||||||||||| ||||||||||||||||||||| ||||||| ||| ||||||||| ||| ||||||||||    
T  40709427 aaaacacttaatttctttttaaaaaaccttttacattgttcataatttaaaaaataaaagtga-ccctcccctccgttcccctcctaaatcctcaatcca 40709525  T
Q  368 aacacac 374  Q
    |||||||    
T  40709526 aacacac 40709532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 174 - 328
Target Start/End: Complemental strand, 25268472 - 25268313
Alignment:
Q  174 gaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaa 273  Q
    |||||||||| |||| |||||||||||| |||  || |||||||||||||||||| |||||| ||| |||| | |||| ||||||||| |||||||||||    
T  25268472 gaggggagggtttactttccttttttaaattacggaaattataaaatgatttttagaaaatttaatcaacaacgtgataaatgatcatataatacttcaa 25268373  T
Q  274 aaacacttaa-----tttaaaaagacattttacattgttcgtaatttaaaaaataaaagt 328  Q
    ||||||||||     |||||||| ||||||||||||||||  ||||||||| ||||||||    
T  25268372 aaacacttaatttattttaaaaatacattttacattgttcaaaatttaaaatataaaagt 25268313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 145 - 326
Target Start/End: Complemental strand, 47071288 - 47071102
Alignment:
Q  145 ttaagggtgtgtttgggaagagggtttaggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaaca 244  Q
    ||||||||||||||||    ||||||||||| |||| | || || || ||||||||| |||  ||||||||||||||||||||| |||||| ||||||||    
T  47071288 ttaagggtgtgtttggatgaagggtttaggaagggaagactaacttttcttttttaaattacggacattataaaatgatttttagaaaatttaattaaca 47071189  T
Q  245 gcatgatcaatgatcatgtaatacttcaaaaacacttaa-----tttaaaaagacattttacattgttcgtaatttaaaaaataaaa 326  Q
     |||||| |||||||||  |||| |||||||||||||||     ||| |||| ||||||||||||| |||||||||| |||||||||    
T  47071188 acatgataaatgatcataaaatatttcaaaaacacttaacttattttgaaaaaacattttacattgctcgtaatttacaaaataaaa 47071102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 215 - 347
Target Start/End: Original strand, 51303461 - 51303600
Alignment:
Q  215 taaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaattt------aaaaagacattttacattgttc 308  Q
    |||||||||||||  ||||||||||||||| |||||| ||||||||| ||||||||||||||||||||||||      ||||| |  |||||||||||||    
T  51303461 taaaatgatttttttaaaattgaattaacaacatgataaatgatcatataatacttcaaaaacacttaatttattttaaaaaaaatgttttacattgttc 51303560  T
Q  309 gtaatttaaaaaat-aaaagtgagccctcccatcccttcc 347  Q
    |||||||||||||| |||| ||||||||||| ||||||||    
T  51303561 gtaatttaaaaaataaaaaatgagccctcccttcccttcc 51303600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 169 - 376
Target Start/End: Original strand, 525133 - 525343
Alignment:
Q  169 tttaggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatac 268  Q
    ||||||||||||||  |||| || ||||||||| |||  ||||| ||||||| ||||||| ||| |||||||||||  ||||| |||||| || ||||||    
T  525133 tttaggaggggagga-ttacttttcttttttaaattacggacat-ataaaataatttttagaaa-ttgaattaacaatatgataaatgattatataatac 525229  T
Q  269 ttcaaaaacacttaattta------aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctca 362  Q
    |||||| | ||||||||||      |||| ||||||||| ||||| |||||||||||| ||||||||| | || || ||||||||| ||| |||||||||    
T  525230 ttcaaacaaacttaatttattttaaaaaaaacattttacgttgtttgtaatttaaaaattaaaagtgaactcttccttcccttcccgtcctaaaccctca 525329  T
Q  363 atccaaacacaccc 376  Q
    ||||||||||||||    
T  525330 atccaaacacaccc 525343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 193 - 338
Target Start/End: Complemental strand, 2506728 - 2506578
Alignment:
Q  193 cttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaattta----- 287  Q
    ||||||||| ||| ||| |||||||||| ||||||||||||| |||||||||  || || ||||||||| |||||||||||||||||||||||||         
T  2506728 cttttttaaattacagatattataaaataatttttaaaaaatcgaattaacaatataataaatgatcatataatacttcaaaaacacttaatttattttg 2506629  T
Q  288 aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctccc 338  Q
    |||| |||||||| |||| ||||||||||||| |||||| ||| |||||||    
T  2506628 aaaaaacattttatattggtcgtaatttaaaagataaaaatgaaccctccc 2506578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 294 - 376
Target Start/End: Complemental strand, 51303467 - 51303385
Alignment:
Q  294 cattttacattgttcgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    |||||||||||||| ||||| |||||||||||||||||||||||| |||| |||||||| |||||||||||||||||||||||    
T  51303467 cattttacattgttggtaatataaaaaataaaagtgagccctcccctcccctcccctcctaaaccctcaatccaaacacaccc 51303385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 147 - 334
Target Start/End: Complemental strand, 1344783 - 1344592
Alignment:
Q  147 aagggtgtgtttgggaagagggtttaggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagc 246  Q
    |||| |||||||||   |||||||||||||||||    |||  || ||||||||| |||  |||||| |||||||||||||| |||||||||  |||| |    
T  1344783 aaggatgtgtttggatggagggtttaggaggggaaaatttatttttcttttttaaattacggacattgtaaaatgatttttagaaaattgaaccaacaac 1344684  T
Q  247 atgatcaatgatcatgtaatacttcaaaaacacttaattta----aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccc 334  Q
    ||||| ||| | ||| || ||| |||||||||||||||||     |||| ||||||| ||||||| ||||||||||||||||||||||||||    
T  1344683 atgataaataaacatatattacatcaaaaacacttaattttttttaaaaaacattttgcattgtttgtaatttaaaaaataaaagtgagccc 1344592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 173 - 270
Target Start/End: Complemental strand, 35513006 - 35512909
Alignment:
Q  173 ggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatactt 270  Q
    |||||||||||||||| ||  |||||||| |||  ||||||||||||||||||||| ||||||||||||||| |||||| ||||||||| ||||||||    
T  35513006 ggaggggagggcttacttttattttttaaattatggacattataaaatgatttttagaaaattgaattaacaacatgataaatgatcatataatactt 35512909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 208 - 369
Target Start/End: Original strand, 13386989 - 13387163
Alignment:
Q  208 gacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaattt-------------aaaaagac 294  Q
    ||||| |||||| |||||||| ||||||||||||||| |||||| ||||||||| ||||||   |||||||||||||||             ||||| ||    
T  13386989 gacatcataaaacgatttttagaaaattgaattaacaacatgataaatgatcatataatacacaaaaaacacttaatttatttataaaaaaaaaaaaaac 13387088  T
Q  295 attttacattgttcgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaa 369  Q
    ||||| ||||||| |||||||||||||||||| |||| |||||  || ||| |||||| ||||||||||||||||    
T  13387089 atttttcattgtttgtaatttaaaaaataaaaatgagtcctccactctctttccctcctaaaccctcaatccaaa 13387163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 225 - 376
Target Start/End: Complemental strand, 17622694 - 17622537
Alignment:
Q  225 tttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaatttaaaaagacatttta------cattgttcgtaatttaaa 318  Q
    |||||||||||||||||| | |||||| | ||||||| ||||||||| |||||||||||||||  |     |||||      ||||||||||| ||||||    
T  17622694 tttaaaaaattgaattaataacatgataagtgatcatataatacttctaaaacacttaatttattatttttttttaaaattacattgttcgtagtttaaa 17622595  T
Q  319 aaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    ||||||||||||| ||||||||  ||||||||||  |||||| |||||||||||||||    
T  17622594 aaataaaagtgagtcctcccattgcttcccctcctgaacccttaatccaaacacaccc 17622537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 284 - 369
Target Start/End: Original strand, 23536839 - 23536924
Alignment:
Q  284 tttaaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaa 369  Q
    |||||||| ||||||||||||| || | ||||||||||||||| ||||||||||| ||||||||||||  ||| ||||||||||||    
T  23536839 tttaaaaaaacattttacattgatcattatttaaaaaataaaaatgagccctcccctcccttcccctcataaatcctcaatccaaa 23536924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 208 - 376
Target Start/End: Complemental strand, 20607390 - 20607224
Alignment:
Q  208 gacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaattta---------aaaagacattt 298  Q
    ||||||||||||||||||||  |||||| ||||||||   ||||  || ||||| |||||||||||||||||||||||||         |||| ||||||    
T  20607390 gacattataaaatgattttttgaaaattaaattaaca---tgatatattatcatataatacttcaaaaacacttaatttatttaaaaaaaaaaaacattt 20607294  T
Q  299 tacattgttcgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
     |||||||   |||||||||||||||||||||||||     ||||||||||||| ||||||||||| |||||||||||    
T  20607293 -acattgta--taatttaaaaaataaaagtgagccc-----tcccttcccctcctaaaccctcaattcaaacacaccc 20607224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 310 - 373
Target Start/End: Original strand, 35512974 - 35513037
Alignment:
Q  310 taatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacaca 373  Q
    ||||||||||||||||||| ||||||||| ||||||||||||| |||||||| |||||||||||    
T  35512974 taatttaaaaaataaaagtaagccctcccctcccttcccctcctaaaccctccatccaaacaca 35513037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 208 - 338
Target Start/End: Original strand, 40287325 - 40287463
Alignment:
Q  208 gacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaattt--------aaaaagacatttt 299  Q
    |||||| | |||||| ||||| |||||||||||||||  || || |||||| || ||||||||||||||||||||||||        ||| | | |||||    
T  40287325 gacattgtgaaatgagttttagaaaattgaattaacaaaatcataaatgattatataatacttcaaaaacacttaatttatttaaaaaaatatatatttt 40287424  T
Q  300 acattgttcgtaatttaaaaaataaaagtgagccctccc 338  Q
    |||| ||||||| |||||||||||||||||||| |||||    
T  40287425 acatagttcgtagtttaaaaaataaaagtgagctctccc 40287463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 308 - 376
Target Start/End: Complemental strand, 12234079 - 12234011
Alignment:
Q  308 cgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    |||||||||||||| |||| | |||||| || ||||||||||||| |||||||||||||||||||||||    
T  12234079 cgtaatttaaaaaagaaaattaagccctaccctcccttcccctcctaaaccctcaatccaaacacaccc 12234011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 288 - 376
Target Start/End: Complemental strand, 38509983 - 38509895
Alignment:
Q  288 aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    ||||||||||| | | ||| |||||||||||||  |||||||| ||||||  ||||||||||||| |||||||| ||||||||||||||    
T  38509983 aaaagacatttcatagtgtccgtaatttaaaaatgaaaagtgaaccctcctctcccttcccctcctaaaccctctatccaaacacaccc 38509895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 308 - 370
Target Start/End: Original strand, 2859107 - 2859169
Alignment:
Q  308 cgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaac 370  Q
    ||||||||||||||||||||| | ||||||| ||||||||||||| ||||| |||||||||||    
T  2859107 cgtaatttaaaaaataaaagtaaaccctcccctcccttcccctcctaaaccttcaatccaaac 2859169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 256 - 376
Target Start/End: Complemental strand, 30010458 - 30010333
Alignment:
Q  256 gatcatgtaatacttcaaaaacacttaatttaa-----aaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccatcccttcccct 350  Q
    |||||| |||||||||||  ||||||||||||      ||| |||| ||| || || ||||||||||| || |||||| |  |||||| |||||||||||    
T  30010458 gatcatataatacttcaaccacacttaatttattttagaaaaacatgttatatagtccgtaatttaaacaagaaaagtaaatcctcccctcccttcccct 30010359  T
Q  351 ccaaaaccctcaatccaaacacaccc 376  Q
    || |||||||||||||||||||||||    
T  30010358 cctaaaccctcaatccaaacacaccc 30010333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 223 - 331
Target Start/End: Complemental strand, 52707803 - 52707691
Alignment:
Q  223 tttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaattta-----aaaagacattttacattgttcgtaatttaa 317  Q
    ||||| ||||||| ||| |||| |||||| |||||| || |||||||||||||| || |||||||     |||| ||||||||||||||| ||| |||||    
T  52707803 ttttttaaaaatttaat-aacaacatgataaatgatgatataatacttcaaaaatacataatttatttttaaaaaacattttacattgtttgtagtttaa 52707705  T
Q  318 aaaataaaagtgag 331  Q
    ||||||||||||||    
T  52707704 aaaataaaagtgag 52707691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 305 - 376
Target Start/End: Complemental strand, 41498476 - 41498405
Alignment:
Q  305 gttcgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    |||| |||||||||||  |||||| | ||||||| || |||||||||| |||||||||||||||||||||||    
T  41498476 gttcataatttaaaaacgaaaagtaaaccctcccctcacttcccctcctaaaccctcaatccaaacacaccc 41498405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 308 - 374
Target Start/End: Complemental strand, 7444547 - 7444481
Alignment:
Q  308 cgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacac 374  Q
    |||||||||||||| |||||| | ||||||| ||||||| ||||| ||||||||||||| |||||||    
T  7444547 cgtaatttaaaaaagaaaagtaaaccctcccttcccttctcctcccaaaccctcaatcctaacacac 7444481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 230 - 326
Target Start/End: Original strand, 50079476 - 50079577
Alignment:
Q  230 aaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaa-----tttaaaaagacattttacattgttcgtaatttaaaaaataa 324  Q
    |||||| || |||||  ||||| ||||||||| |||||||| ||||||||||||     |||||||| |||||||| |||||||||| |||||| |||||    
T  50079476 aaaatttaactaacaatatgataaatgatcatataatactttaaaaacacttaatttattttaaaaaaacattttatattgttcgtactttaaataataa 50079575  T
Q  325 aa 326  Q
    ||    
T  50079576 aa 50079577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 332 - 376
Target Start/End: Complemental strand, 26324059 - 26324015
Alignment:
Q  332 ccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    ||||||| ||||||||||||| |||||||||||||||||||||||    
T  26324059 ccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 26324015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 308 - 376
Target Start/End: Original strand, 35349637 - 35349705
Alignment:
Q  308 cgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    |||||||||||||  |||||| | ||||||| ||||||||||||  ||||||| |||||||||||||||    
T  35349637 cgtaatttaaaaacgaaaagtaaaccctcccctcccttcccctcataaacccttaatccaaacacaccc 35349705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 308 - 376
Target Start/End: Complemental strand, 40095002 - 40094934
Alignment:
Q  308 cgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    |||||||||||||  |||||| | ||||||| | ||||||||||| |||||||| ||||||||||||||    
T  40095002 cgtaatttaaaaatgaaaagtaaaccctccccttccttcccctcctaaaccctccatccaaacacaccc 40094934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 308 - 375
Target Start/End: Original strand, 12234185 - 12234252
Alignment:
Q  308 cgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacacc 375  Q
    |||||||||||||  |||| | | ||||||| ||||||||||||| |||||||| |||||||||||||    
T  12234185 cgtaatttaaaaatgaaaactaaaccctcccctcccttcccctcctaaaccctccatccaaacacacc 12234252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 308 - 374
Target Start/End: Original strand, 38510069 - 38510135
Alignment:
Q  308 cgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacac 374  Q
    |||| ||||||||| |||| | | ||||||| ||||||||||||| ||||||| |||||||||||||    
T  38510069 cgtagtttaaaaaagaaaactaaaccctcccctcccttcccctcctaaacccttaatccaaacacac 38510135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 306 - 376
Target Start/End: Complemental strand, 40709363 - 40709293
Alignment:
Q  306 ttcgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    |||||||||||||||| |||||| || |||||  ||||||||||||  ||||| | |||||||||||||||    
T  40709363 ttcgtaatttaaaaaagaaaagtaagtcctcctctcccttcccctcttaaaccttaaatccaaacacaccc 40709293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 332 - 376
Target Start/End: Original strand, 20607416 - 20607460
Alignment:
Q  332 ccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    ||||||| ||||||||||||| |||||||| ||||||||||||||    
T  20607416 ccctcccctcccttcccctcctaaaccctccatccaaacacaccc 20607460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 376
Target Start/End: Original strand, 30010507 - 30010575
Alignment:
Q  308 cgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    |||||||| ||||  |||||| | ||||||| ||||||||||| | |||||||| ||||||||||||||    
T  30010507 cgtaatttcaaaatgaaaagtaaaccctcccctcccttccccttctaaaccctccatccaaacacaccc 30010575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 376
Target Start/End: Original strand, 32951493 - 32951561
Alignment:
Q  308 cgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    |||||||||||||  |||||| | | ||||| |||||||| |||| |||| ||||||||||||||||||    
T  32951493 cgtaatttaaaaacgaaaagtaaactctcccctcccttcctctcctaaactctcaatccaaacacaccc 32951561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 309 - 376
Target Start/End: Complemental strand, 2859000 - 2858933
Alignment:
Q  309 gtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    |||||||| |||  |||||| | ||||||| |||||| |||||| |||||||| ||||||||||||||    
T  2859000 gtaatttagaaatgaaaagtaaaccctcccctccctttccctcctaaaccctccatccaaacacaccc 2858933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 313 - 373
Target Start/End: Complemental strand, 35512694 - 35512638
Alignment:
Q  313 tttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacaca 373  Q
    ||||||||||||||||||||||||    ||| |||||||| |||||||| |||||||||||    
T  35512694 tttaaaaaataaaagtgagccctc----cccctcccctcctaaaccctccatccaaacaca 35512638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 376
Target Start/End: Original strand, 26941042 - 26941076
Alignment:
Q  342 ccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    ||||||||||| |||||||||||||||||||||||    
T  26941042 ccttcccctcctaaaccctcaatccaaacacaccc 26941076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 308 - 376
Target Start/End: Complemental strand, 1085559 - 1085490
Alignment:
Q  308 cgtaatttaaaaaat-aaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    ||||||||||||||  |||||| || |||||| ||| | ||||||| |||||||| ||||||||||||||    
T  1085559 cgtaatttaaaaaaggaaaagtaagtcctcccctccatccccctcctaaaccctccatccaaacacaccc 1085490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 373
Target Start/End: Complemental strand, 51597793 - 51597672
Alignment:
Q  257 atcatgtaatacttcaaaaacacttaa-----tttaaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccatcccttcccctc 351  Q
    ||||| |||||||||||  ||||||||     |||||||| |||| ||| || || ||| |||||||||| |||||| | | ||||| ||||||||  ||    
T  51597793 atcatataatacttcaatcacacttaatttattttaaaaaaacatgttatatagtccgtgatttaaaaaagaaaagtaaactctcccctcccttcctttc 51597694  T
Q  352 caaaaccctcaatccaaacaca 373  Q
      ||||||||||||||||||||    
T  51597693 ataaaccctcaatccaaacaca 51597672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 334 - 374
Target Start/End: Complemental strand, 20576176 - 20576136
Alignment:
Q  334 ctcccatcccttcccctccaaaaccctcaatccaaacacac 374  Q
    ||||| ||||||||||||| |||||||| ||||||||||||    
T  20576176 ctcccctcccttcccctcctaaaccctctatccaaacacac 20576136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 227 - 287
Target Start/End: Original strand, 44210994 - 44211054
Alignment:
Q  227 taaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaattta 287  Q
    ||||||||| || ||||| |||||| || |||||| |||||||||||  ||||||||||||    
T  44210994 taaaaaattaaaataacaacatgataaacgatcatataatacttcaatcacacttaattta 44211054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 313 - 373
Target Start/End: Original strand, 49946768 - 49946828
Alignment:
Q  313 tttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacaca 373  Q
    |||||| || |||||| | ||||| |||||||||||| || || |||||||||||||||||    
T  49946768 tttaaacaagaaaagtaaaccctcacatcccttccccgcctaatccctcaatccaaacaca 49946828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 107; Significance: 2e-53; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 208 - 376
Target Start/End: Complemental strand, 15353537 - 15353365
Alignment:
Q  208 gacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacactta---attt-aaaaagacattttacat 303  Q
    ||||||||||||||||||||| ||||||||||||||| ||| || ||||||||| |||||| |||||||||||||   |||| ||||| |||||||||||    
T  15353537 gacattataaaatgatttttagaaaattgaattaacaacattataaatgatcatataatacatcaaaaacacttatttatttcaaaaaaacattttacat 15353438  T
Q  304 tgttcgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    ||||||||||||||||||||||||||||| ||| | ||||||||||||| |||||||||||||||||||||||    
T  15353437 tgttcgtaatttaaaaaataaaagtgagcgctctcctcccttcccctcctaaaccctcaatccaaacacaccc 15353365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 208 - 376
Target Start/End: Complemental strand, 15323399 - 15323226
Alignment:
Q  208 gacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaattta-----aaaagacattttaca 302  Q
    ||||||||||||||||||||| ||||||||||||||| |||||  ||||||||| |||||| ||| ||||||||||||||     |||| | ||||||||    
T  15323399 gacattataaaatgatttttagaaaattgaattaacaacatgacaaatgatcatataatacatcagaaacacttaatttattttaaaaatatattttaca 15323300  T
Q  303 ttgttcgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    |||||||||||||||||||||||||||||| ||| | ||||||||||||| |||||||||||||||||||||||    
T  15323299 ttgttcgtaatttaaaaaataaaagtgagcgctctcctcccttcccctcctaaaccctcaatccaaacacaccc 15323226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 194 - 376
Target Start/End: Original strand, 9051590 - 9051775
Alignment:
Q  194 ttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaattta-----a 288  Q
    |||||||| |||  || |||||||||||||||||| ||||||||||||||| |||||| ||||||||| |  ||||| ||||||||||||||||     |    
T  9051590 ttttttaaattacggatattataaaatgatttttagaaaattgaattaacaacatgataaatgatcatatgctactttaaaaacacttaatttatttaaa 9051689  T
Q  289 aaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    ||| | |||||||||||||||||||||||||| |||||||||||  |||| ||||||||||||  |||||||||||||||||||||||    
T  9051690 aaaaatattttacattgttcgtaatttaaaaa-taaaagtgagca-tcccctcccttcccctcttaaaccctcaatccaaacacaccc 9051775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 263 - 376
Target Start/End: Complemental strand, 23091114 - 23090996
Alignment:
Q  263 taatacttcaaaaacacttaattta-----aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaac 357  Q
    |||||||||||||||||||||||||     |||| |||||||| |||||||||||||||||| |||||||||||||||||| ||||||||||||| ||||    
T  23091114 taatacttcaaaaacacttaatttagtttaaaaatacattttagattgttcgtaatttaaaagataaaagtgagccctcccctcccttcccctcctaaac 23091015  T
Q  358 cctcaatccaaacacaccc 376  Q
    | |||||||||||||||||    
T  23091014 cttcaatccaaacacaccc 23090996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 173 - 376
Target Start/End: Complemental strand, 10293457 - 10293251
Alignment:
Q  173 ggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttca 272  Q
    ||||||||| |||||| || |||||| || ||| ||| |||||||||||||||||| |||| |||||| ||| ||| || ||| ||||| ||||||||||    
T  10293457 ggaggggagagcttacttttctttttcaaattacagatattataaaatgatttttagaaaactgaattgacaacatcataaataatcatataatacttca 10293358  T
Q  273 aaaacacttaatttaa---aaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaa 369  Q
    ||||    |||||||    ||| | |||||||||||||||||||||||||||||||||||||||||||| ||  || |  ||| |||||| |||||||||    
T  10293357 aaaatcggtaatttattttaaaaatattttacattgttcgtaatttaaaaaataaaagtgagccctcccctctttttctttcctaaacccacaatccaaa 10293258  T
Q  370 cacaccc 376  Q
    |||||||    
T  10293257 cacaccc 10293251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 175 - 376
Target Start/End: Complemental strand, 31799128 - 31798919
Alignment:
Q  175 aggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaa 274  Q
    ||||||| | |||| || ||||||||| |||  || |||||||||| |||||| |||||||||||||||| |||||| ||||||||| ||||||||||||    
T  31799128 aggggagagtttacttttcttttttaaattacggatattataaaataattttttaaaaattgaattaacaacatgataaatgatcatataatacttcaaa 31799029  T
Q  275 aacacttaattt--------aaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatcc 366  Q
    |||| ||  |||        ||||| ||||||||||||| ||||||||||||||||||||| ||| | || | || |||  ||||| |||||||||||||    
T  31799028 aacattttttttattaaaaaaaaaaaacattttacattgctcgtaatttaaaaaataaaagcgagtcatctcctctcttatcctcctaaaccctcaatcc 31798929  T
Q  367 aaacacaccc 376  Q
    ||||||||||    
T  31798928 aaacacaccc 31798919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 212 - 337
Target Start/End: Complemental strand, 26318475 - 26318345
Alignment:
Q  212 ttataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaa-----tttaaaaagacattttacattgt 306  Q
    ||||||||||| ||||| ||||||||||||||| |||||| | ||||||| |||||||||||||||||||||     |||||||| |||||||| ||| |    
T  26318475 ttataaaatgacttttagaaaattgaattaacaacatgataattgatcatataatacttcaaaaacacttaatttattttaaaaaaacattttatatttt 26318376  T
Q  307 tcgtaatttaaaaaataaaagtgagccctcc 337  Q
    |||||||||||||||||||| ||| ||||||    
T  26318375 tcgtaatttaaaaaataaaaatgaaccctcc 26318345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 208 - 376
Target Start/End: Original strand, 4097305 - 4097479
Alignment:
Q  208 gacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaattt-----------aaaaagacat 296  Q
    |||||||||||||  |||||| ||||||||||||||| |||||| |||||||||  |||||||| ||||||||||||||           ||||| ||||    
T  4097305 gacattataaaatattttttagaaaattgaattaacaacatgataaatgatcatacaatacttccaaaacacttaatttatttttaaaaaaaaaaaacat 4097404  T
Q  297 tttacattgttcgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    ||||||||||||  |||||||||||||||||||||      |||||| |||||||| |||||||| |||| |||||||||    
T  4097405 tttacattgttcacaatttaaaaaataaaagtgag-----tcatcccctcccctcctaaaccctccatcctaacacaccc 4097479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 246 - 374
Target Start/End: Original strand, 4097620 - 4097754
Alignment:
Q  246 catgatcaatgatcatgtaatacttcaaaaacacttaattta------aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctccca 339  Q
    |||||| || |||||| |||||||||||  ||||||||||||      |||| | || ||| ||||| |||||||||||||| |||||||| |||| ||     
T  4097620 catgataaacgatcatataatacttcaatcacacttaatttattttggaaaaaaaatgttatattgtccgtaatttaaaaaagaaaagtgaacccttccc 4097719  T
Q  340 tcccttcccctccaaaaccctcaatccaaacacac 374  Q
    ||||||||||||  |||||||||||||||||||||    
T  4097720 tcccttcccctcttaaaccctcaatccaaacacac 4097754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 184 - 287
Target Start/End: Complemental strand, 3841284 - 3841180
Alignment:
Q  184 cttacattccttttttaatttaaagacattataaaatgattttt--aaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacactt 281  Q
    ||||| || ||||||||| |||  ||||||||||||||||||||  | |||||||||||||||  ||||| |||||| || |||||||||||||||||||    
T  3841284 cttacttttcttttttaaattacggacattataaaatgatttttttacaaaattgaattaacaa-atgataaatgatgatataatacttcaaaaacactt 3841186  T
Q  282 aattta 287  Q
    ||||||    
T  3841185 aattta 3841180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 208 - 278
Target Start/End: Original strand, 15373669 - 15373739
Alignment:
Q  208 gacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaaca 278  Q
    ||||||||||||||||||||| ||||||||||||||| |||||  ||||||||| |||||| |||||||||    
T  15373669 gacattataaaatgatttttagaaaattgaattaacaacatgacaaatgatcatataatacatcaaaaaca 15373739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 193 - 287
Target Start/End: Original strand, 25468454 - 25468548
Alignment:
Q  193 cttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaattta 287  Q
    ||||||||| |||  ||||||||||||| ||||| | |||||| | |||||| | |||| |||||| || |||||||||||||||||||||||||    
T  25468454 cttttttaaattatggacattataaaataattttaagaaaattaatttaacaacgtgataaatgattatataatacttcaaaaacacttaattta 25468548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 173 - 376
Target Start/End: Complemental strand, 10818425 - 10818230
Alignment:
Q  173 ggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttca 272  Q
    ||||||||||| |||| || | ||||||| |||  |||| ||| ||||| ||||||||| ||| |  ||  | |||||| ||||||||| ||||||||||    
T  10818425 ggaggggagggtttacttttcatttttaaattacggacactatgaaatgttttttaaaatattaacatattaacatgataaatgatcatataatacttca 10818326  T
Q  273 aaaacacttaatttaaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacac 372  Q
    |  |||     |||||||   ||| ||| ||||| |||||||||||||| |||| | | |  |||| ||||||||||||| |||||||||||||||||||    
T  10818325 atcaca-----tttaaaa---catgttatattgtccgtaatttaaaaaagaaaaataaacaatcccctcccttcccctcctaaaccctcaatccaaacac 10818234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 173 - 278
Target Start/End: Original strand, 34176606 - 34176711
Alignment:
Q  173 ggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttca 272  Q
    |||||||| | ||||| || ||||||||| |||   | |||||||| |||||||||||||||||||||||||  || || ||||||||| ||||| ||||    
T  34176606 ggaggggaagacttacttttcttttttaaattacgaaaattataaattgatttttaaaaaattgaattaacaatataataaatgatcatataatatttca 34176705  T
Q  273 aaaaca 278  Q
    ||||||    
T  34176706 aaaaca 34176711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 308 - 376
Target Start/End: Complemental strand, 14515542 - 14515474
Alignment:
Q  308 cgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    |||||||||||||| ||||   | ||||||| ||||||||||||| |||||||||||||||||||||||    
T  14515542 cgtaatttaaaaaagaaaaacaaaccctcccctcccttcccctcctaaaccctcaatccaaacacaccc 14515474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 293 - 332
Target Start/End: Original strand, 15373737 - 15373776
Alignment:
Q  293 acattttacattgttcgtaatttaaaaaataaaagtgagc 332  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  15373737 acattttacattgttcgtaatttaaaaaataaaagtgagc 15373776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 310 - 376
Target Start/End: Complemental strand, 30487373 - 30487307
Alignment:
Q  310 taatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    |||||||| ||  |||||||| ||||||| ||||||||||||| |||||||| ||||||||||||||    
T  30487373 taatttaacaatgaaaagtgaaccctcccctcccttcccctcctaaaccctccatccaaacacaccc 30487307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 293 - 331
Target Start/End: Original strand, 34177060 - 34177098
Alignment:
Q  293 acattttacattgttcgtaatttaaaaaataaaagtgag 331  Q
    |||||||||||||||||||||||||||||||||||||||    
T  34177060 acattttacattgttcgtaatttaaaaaataaaagtgag 34177098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 283 - 376
Target Start/End: Original strand, 10818366 - 10818459
Alignment:
Q  283 atttaaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    |||| |||| |||||| | | ||| |||||||||||||  |||||| | ||||||| ||||| ||||||| |||| ||||||||||||||||||    
T  10818366 attttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaagtaaaccctcccctccctacccctcctaaactctcaatccaaacacaccc 10818459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 308 - 376
Target Start/End: Complemental strand, 9721207 - 9721139
Alignment:
Q  308 cgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    |||||||||||||  |||| | | ||||||| ||||||||||||| ||||| |||||||||||||||||    
T  9721207 cgtaatttaaaaatgaaaaataaaccctcccctcccttcccctcctaaaccttcaatccaaacacaccc 9721139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 246 - 286
Target Start/End: Complemental strand, 28477116 - 28477076
Alignment:
Q  246 catgatcaatgatcatgtaatacttcaaaaacacttaattt 286  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  28477116 catgataaatgatcatgtaatacttcaaaaacacttaattt 28477076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 246 - 286
Target Start/End: Complemental strand, 29693014 - 29692974
Alignment:
Q  246 catgatcaatgatcatgtaatacttcaaaaacacttaattt 286  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  29693014 catgataaatgatcatgtaatacttcaaaaacacttaattt 29692974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 283 - 326
Target Start/End: Original strand, 5287471 - 5287514
Alignment:
Q  283 atttaaaaagacattttacattgttcgtaatttaaaaaataaaa 326  Q
    ||||||||| |||||||| |||||||||||||||||||||||||    
T  5287471 atttaaaaaaacattttatattgttcgtaatttaaaaaataaaa 5287514  T

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Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 308 - 374
Target Start/End: Complemental strand, 9719100 - 9719034
Alignment:
Q  308 cgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacac 374  Q
    |||||||||||||  |||| | |  |||||| ||||||||||||| |||||||||||||||||||||    
T  9719100 cgtaatttaaaaatgaaaaataaatcctcccctcccttcccctcctaaaccctcaatccaaacacac 9719034  T

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Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 310 - 376
Target Start/End: Original strand, 12811157 - 12811223
Alignment:
Q  310 taatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    ||||||||| || |||||| | ||||||| || |||||| ||| |||||||||||||||||||||||    
T  12811157 taatttaaagaagaaaagtaatccctcccctctcttcccatcctaaaccctcaatccaaacacaccc 12811223  T

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Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 308 - 374
Target Start/End: Original strand, 19278213 - 19278278
Alignment:
Q  308 cgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacac 374  Q
    |||||||||||||| |||| | | ||||||| ||||||||||||| |||| ||||||||||||||||    
T  19278213 cgtaatttaaaaaagaaaa-taaaccctcccctcccttcccctcctaaactctcaatccaaacacac 19278278  T

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Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 308 - 369
Target Start/End: Original strand, 23091133 - 23091195
Alignment:
Q  308 cgtaatttaaaaaat-aaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaa 369  Q
    ||||||||||||||  |||||| ||||||||| ||||||||||||| |||||||| |||||||    
T  23091133 cgtaatttaaaaaaagaaaagtaagccctcccctcccttcccctcctaaaccctccatccaaa 23091195  T

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Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 308 - 374
Target Start/End: Original strand, 30487480 - 30487546
Alignment:
Q  308 cgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacac 374  Q
    |||| |||||||||||||| | | ||||||  ||||||||||||| |||||||||||| ||||||||    
T  30487480 cgtagtttaaaaaataaaactaaaccctccactcccttcccctcctaaaccctcaatcgaaacacac 30487546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 288 - 376
Target Start/End: Complemental strand, 665929 - 665842
Alignment:
Q  288 aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    ||||||||||| | | | ||| |||||||||||  |||| ||| ||||||| || |||||||||| |||||||| ||||||||||||||    
T  665929 aaaagacatttcataatattcataatttaaaaatgaaaaatgaaccctcccctcacttcccctcctaaaccctc-atccaaacacaccc 665842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 280 - 376
Target Start/End: Original strand, 9719178 - 9719273
Alignment:
Q  280 ttaatttaaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    ||||||||||||| ||| ||| || || || ||||||||||| |||| | | ||| ||| || |||||||||  |||||||||||||||||||||||    
T  9719178 ttaatttaaaaag-catgttatatagtccggaatttaaaaaagaaaattaaacccacccctctcttcccctcataaaccctcaatccaaacacaccc 9719273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 304 - 374
Target Start/End: Complemental strand, 5585375 - 5585304
Alignment:
Q  304 tgttcgtaatttaaaaaataaaa-gtgagccctcccatcccttcccctccaaaaccctcaatccaaacacac 374  Q
    |||||||||||||||||| |||| || | | || |||| ||||||||||| |||||||| ||||||||||||    
T  5585375 tgttcgtaatttaaaaaagaaaaagtaaactcttccattccttcccctcctaaaccctccatccaaacacac 5585304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 376
Target Start/End: Complemental strand, 4097270 - 4097236
Alignment:
Q  342 ccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    ||||||||||| |||||||||||||||||||||||    
T  4097270 ccttcccctcctaaaccctcaatccaaacacaccc 4097236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 284 - 374
Target Start/End: Original strand, 30850063 - 30850153
Alignment:
Q  284 tttaaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacac 374  Q
    |||||||| |||| ||| ||  ||| |||||||||| | |||||| | | ||||| || ||| |||||| |||||||||||||||||||||    
T  30850063 tttaaaaaaacatattatataattcataatttaaaataaaaaagtaaactctcccttctctttccctcctaaaccctcaatccaaacacac 30850153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 295 - 376
Target Start/End: Original strand, 14515633 - 14515714
Alignment:
Q  295 attttacattgttcgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    |||||| | ||||| |||||||||||  |||  | | ||||||| | ||||||||||| |||||||| ||||||||||||||    
T  14515633 attttatagtgttcataatttaaaaatgaaatctaaaccctccctttccttcccctcctaaaccctccatccaaacacaccc 14515714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 313 - 374
Target Start/End: Complemental strand, 31849174 - 31849113
Alignment:
Q  313 tttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacac 374  Q
    ||||||||| |||| | | ||||||| ||||||||||||  ||||||||||||| |||||||    
T  31849174 tttaaaaaagaaaactaaaccctcccctcccttcccctcttaaaccctcaatcctaacacac 31849113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 342 - 374
Target Start/End: Complemental strand, 7775991 - 7775959
Alignment:
Q  342 ccttcccctccaaaaccctcaatccaaacacac 374  Q
    |||||||||||||||||||| ||||||||||||    
T  7775991 ccttcccctccaaaaccctccatccaaacacac 7775959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 306 - 362
Target Start/End: Complemental strand, 34176642 - 34176586
Alignment:
Q  306 ttcgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctca 362  Q
    |||||||||||||||| |||||| || | |||| |||| |||||||| |||||||||    
T  34176642 ttcgtaatttaaaaaagaaaagtaagtcttcccctcccatcccctcctaaaccctca 34176586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 107; Significance: 2e-53; HSPs: 41)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 149 - 342
Target Start/End: Complemental strand, 40858798 - 40858600
Alignment:
Q  149 gggtgtgtttgggaagagggtttaggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcat 248  Q
    ||||||||||||   |||||||||||||||||||| |||  || ||||||||| |||  |||||||||||||||| |||  ||||||||||||||| |||    
T  40858798 gggtgtgtttggatggagggtttaggaggggagggtttagttttcttttttaaattacggacattataaaatgatcttttgaaaattgaattaacaacat 40858699  T
Q  249 gatcaatgatcatgtaatacttcaaaaacac-----ttaatttaaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccatcc 342  Q
    ||| ||||||||| |||||||||||||||||     ||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40858698 gataaatgatcatataatacttcaaaaacactaaatttattttaaaaaaacattttacattgttcgtaatttaaaaaataaaagtgagccctcccatcc 40858600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 148 - 376
Target Start/End: Complemental strand, 41414313 - 41414079
Alignment:
Q  148 agggtgtgtttgggaagagggtttaggaggggagggcttacattcctttttt-aatttaaagacattataaaatgatttttaaaaaattgaattaacagc 246  Q
    |||||||||||||   | |||||||||||||||| | |||| || ||||||| || | |  ||||||||||||||||||||| |||||||| |||||| |    
T  41414313 agggtgtgtttggatggtgggtttaggaggggagtgtttacttttctttttttaaatcagggacattataaaatgatttttagaaaattgagttaacaac 41414214  T
Q  247 atgatcaatgatcatgtaatacttcaaaaac-----acttaatttaaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccatc 341  Q
    ||||| ||||||||| |||||||||||||||     | ||| |||||||| ||||||||| |||||| ||||||||||||||||||||||||||||| ||    
T  41414213 atgataaatgatcatataatacttcaaaaacgcttgatttattttaaaaaaacattttaccttgttcataatttaaaaaataaaagtgagccctcccctc 41414114  T
Q  342 ccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    |||| |||||| |||||||||||| ||||| ||||    
T  41414113 cctttccctcctaaaccctcaatctaaacataccc 41414079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 175 - 371
Target Start/End: Original strand, 16884010 - 16884209
Alignment:
Q  175 aggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaa 274  Q
    ||||||||||||||||| ||||||||||||| | | || ||||||  | |||||||||||||||| |||| |||||| ||||||||| ||||||||||||    
T  16884010 aggggagggcttacatttcttttttaatttacaaatat-ataaaaaaaattttaaaaaattgaat-aacaacatgataaatgatcatataatacttcaaa 16884107  T
Q  275 aacacttaattta-----aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaa 369  Q
    |||||||||||||     ||||||||||||||||||||||||| |||||||||||||||||| | |  |||||||||| |||| ||||||||||||||||    
T  16884108 aacacttaatttattttaaaaagacattttacattgttcgtaacttaaaaaataaaagtgagtcttatcatcccttcctctcctaaaccctcaatccaaa 16884207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 173 - 338
Target Start/End: Complemental strand, 34641199 - 34641031
Alignment:
Q  173 ggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttca 272  Q
    |||||||||||||||| || ||||||||| |||  ||||||||||||||||||  | ||||||||||||||| |||||| ||||||||| ||||||||||    
T  34641199 ggaggggagggcttacttttcttttttaaattacggacattataaaatgattt--agaaaattgaattaacaacatgataaatgatcatataatacttca 34641102  T
Q  273 aaaacacttaattta-----aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctccc 338  Q
    |||||||||||||||     ||||  | |||||||||||||||||||||||||||||||||||||||||||    
T  34641101 aaaacacttaatttattttaaaaaatccttttacattgttcgtaatttaaaaaataaaagtgagccctccc 34641031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 193 - 371
Target Start/End: Original strand, 10943669 - 10943852
Alignment:
Q  193 cttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaa-----ttta 287  Q
    ||||||||| ||| ||| |||||||||||||||||| ||||||||||||||| ||| || ||| || || |||||||||||||||||||||     ||||    
T  10943669 cttttttaaattatagatattataaaatgatttttagaaaattgaattaacaacataataaataattatataatacttcaaaaacacttaatttatttta 10943768  T
Q  288 aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaaca 371  Q
    |||| ||||||| |||||||||||||||||||| ||||||||| ||||||| || ||| |||||  ||||||||||||||||||    
T  10943769 aaaaaacattttgcattgttcgtaatttaaaaattaaaagtgaaccctcccctctctttccctcataaaccctcaatccaaaca 10943852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 193 - 373
Target Start/End: Original strand, 17474261 - 17474446
Alignment:
Q  193 cttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaattta----- 287  Q
    ||||||||| |||  ||||||||||||| |||||| ||||||||||||||||  ||||| ||| ||||  |||||||||||||||||||||||||         
T  17474261 cttttttaaattacggacattataaaataattttttaaaaattgaattaacaatatgataaataatcaaataatacttcaaaaacacttaatttattttt 17474360  T
Q  288 aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacaca 373  Q
    |||| | |||||||||| ||||||||||||||||||||||| | | ||||| |||||||||||||  |||||||||||||||||||    
T  17474361 aaaaaatattttacattattcgtaatttaaaaaataaaagttaactctcccctcccttcccctcctcaaccctcaatccaaacaca 17474446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 148 - 338
Target Start/End: Complemental strand, 48683848 - 48683651
Alignment:
Q  148 agggtgtgtttgggaagagggtttaggaggggagggcttacattc-cttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagc 246  Q
    |||||||||||||  ||||||||||||||||||||| |||  ||  ||||||||| |||   ||||||||||||||||||||  |||||||||||||| |    
T  48683848 agggtgtgtttggatagagggtttaggaggggagggtttattttttcttttttaaattacgaacattataaaatgatttttaggaaattgaattaacaac 48683749  T
Q  247 at-gatcaatgatcatgtaatacttcaaaaacacttaattta-----aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctccc 338  Q
    || ||| ||||||||| ||||| |||||||||||||||||||     |||| ||||||||||||||||||||||||| ||||||||||||| ||||||    
T  48683748 attgataaatgatcatataatatttcaaaaacacttaatttattttaaaaaaacattttacattgttcgtaatttaagaaataaaagtgagtcctccc 48683651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 196 - 374
Target Start/End: Original strand, 21090129 - 21090312
Alignment:
Q  196 ttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaattta-----aaa 290  Q
    |||||| ||| ||| ||||||||| |||||||  ||||||||||||||| ||||||  || ||||| |||||||||||||||||||||||||     |||    
T  21090129 ttttaaattacagatattataaaacgattttttgaaaattgaattaacaacatgatatattatcatataatacttcaaaaacacttaatttattttaaaa 21090228  T
Q  291 agacattttacattgttcgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacac 374  Q
    | | |||||||||||||| |||||||||||||||||||||| |||| | |||||||| |||| ||||| |||||||||||||||    
T  21090229 aaatattttacattgttcataatttaaaaaataaaagtgagtcctctcctcccttcctctcctaaaccatcaatccaaacacac 21090312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 215 - 376
Target Start/End: Complemental strand, 44412528 - 44412362
Alignment:
Q  215 taaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaattta-----aaaagacattttacattgttcg 309  Q
    |||||||||||||  ||||||||||||||| |||||| ||| ||||| |||||||||||||||||||||||||     |||| |  ||||||||||||||    
T  44412528 taaaatgattttttgaaaattgaattaacaacatgataaatcatcatataatacttcaaaaacacttaatttattttaaaaaaatgttttacattgttcg 44412429  T
Q  310 taatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    |||||||||||  |||| |||| |||||| || |||||||||| ||||||||||| |||||||||||    
T  44412428 taatttaaaaataaaaaatgagtcctcccctctcttcccctcctaaaccctcaattcaaacacaccc 44412362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 173 - 372
Target Start/End: Complemental strand, 26136006 - 26135807
Alignment:
Q  173 ggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttca 272  Q
    |||| |||||| |||| || ||||||||| |||  ||||||||||||| ||||||  |||||||||||||||  ||||| ||| || || ||||||||||    
T  26136006 ggagtggagggtttacttttcttttttaaattacggacattataaaataattttttgaaaattgaattaacaatatgataaataattatataatacttca 26135907  T
Q  273 aaaacacttaattta-----aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatcca 367  Q
    |||||||||||||||     |||| |||||||||||||||| |||||||||||||||||||||| ||     ||||||| | ||| ||||||||||||||    
T  26135906 aaaacacttaatttatttttaaaaaacattttacattgttcataatttaaaaaataaaagtgagtcc-----tcccttctcttcctaaaccctcaatcca 26135812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 193 - 376
Target Start/End: Complemental strand, 24253911 - 24253722
Alignment:
Q  193 cttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaa-----ttta 287  Q
    ||||||||| |||  ||||||||||||||| ||||| ||| ||||||||||| |||||| |||||| || ||| |||||||||||||||||     ||||    
T  24253911 cttttttaaattacggacattataaaatgagttttagaaagttgaattaacaacatgataaatgattatataacacttcaaaaacacttaatttatttta 24253812  T
Q  288 aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccct-cccatcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    ||||   ||||||||||| || ||||||||||| ||||||||| | || ||| |||||| |||||| |||||||||||||||||||||||    
T  24253811 aaaaattattttacattgctcataatttaaaaattaaaagtgaacactccccctccctttccctcctaaaccctcaatccaaacacaccc 24253722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 164 - 375
Target Start/End: Complemental strand, 42772250 - 42772046
Alignment:
Q  164 gagggtttaggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgt 263  Q
    ||||||||||||||||| || |||| || ||| || || |||  ||||||||||||||||||||  ||||||||||||||| |||||| ||||||||| |    
T  42772250 gagggtttaggaggggaaggtttactttgcttcttaaaattacggacattataaaatgattttttgaaaattgaattaacaacatgataaatgatcatat 42772151  T
Q  264 aatacttcaaaaacacttaatttaaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaa 363  Q
    ||||||||||||||||||||||||        ||||  |      ||||||||||||||||||||||| |||||| ||||||||||||  ||||| ||||    
T  42772150 aatacttcaaaaacacttaattta-------tttttcaaaaaaaagtaatttaaaaaataaaagtgagtcctcccctcccttcccctcttaaaccttcaa 42772058  T
Q  364 tccaaacacacc 375  Q
    ||||||||||||    
T  42772057 tccaaacacacc 42772046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 177 - 365
Target Start/End: Original strand, 18086019 - 18086218
Alignment:
Q  177 gggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgat-caatgatcatgtaatacttcaaaa 275  Q
    ||||| |||||| || ||||||||| ||| ||||||||||||||| |||||| ||||||||||||||| ||| ||  |||||||||  ||||||||||||    
T  18086019 gggagagcttacttttcttttttaaattacagacattataaaatgttttttagaaaattgaattaacaacataataaaatgatcataaaatacttcaaaa 18086118  T
Q  276 acacttaattt----------aaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatc 365  Q
    |||||||||||          ||||| ||| ||||||||||| |||||||||||||||| |||||||| | || |||| |||||||  ||||||||||||    
T  18086119 acacttaatttatttgagaaaaaaaaaacaatttacattgttagtaatttaaaaaataatagtgagccttaccctcccatcccctcataaaccctcaatc 18086218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 174 - 336
Target Start/End: Original strand, 8432297 - 8432462
Alignment:
Q  174 gaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaa 273  Q
    ||||||||| ||||| ||  |||||| | ||| |||||||||||||||||||||| ||||||||||||||| |||||| ||| ||  | |||||||||||    
T  8432297 gaggggaggacttacttt--tttttttaattacagacattataaaatgatttttacaaaattgaattaacaacatgataaataattttataatacttcaa 8432394  T
Q  274 aaacacttaa-----tttaaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctc 336  Q
    ||||||||||     |||||||| ||||||| ||||||||||| |||||||| ||||| ||| |||||    
T  8432395 aaacacttaattcattttaaaaaaacatttttcattgttcgtagtttaaaaattaaaattgaaccctc 8432462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 294 - 375
Target Start/End: Original strand, 44412522 - 44412603
Alignment:
Q  294 cattttacattgttcgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacacc 375  Q
    |||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||  ||||| ||||||||||||||||    
T  44412522 cattttacattgttcgtaatttaaaaaataaaagtgagtcctcccctcccttcccctcacaaaccatcaatccaaacacacc 44412603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 215 - 338
Target Start/End: Complemental strand, 46978594 - 46978466
Alignment:
Q  215 taaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaa-----tttaaaaagacattttacattgttcg 309  Q
    |||||||||||||| |||||| |||||||| |||||| |||||| || |||||||||||||||| ||||     |||||||| ||||||||||  |||||    
T  46978594 taaaatgatttttataaaatttaattaacaacatgataaatgattatataatacttcaaaaacatttaatttattttaaaaaaacattttacaccgttcg 46978495  T
Q  310 taatttaaaaaataaaagtgagccctccc 338  Q
    ||||||||||| ||||||||| |||||||    
T  46978494 taatttaaaaattaaaagtgaaccctccc 46978466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 223 - 376
Target Start/End: Original strand, 27197734 - 27197892
Alignment:
Q  223 tttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaattta-----aaaagacattttacattgttcgtaatttaa 317  Q
    |||||| ||||||||||||||| ||||||  |||||||| |||||||| ||| | ||||||||||     |||| | || ||||||||||||||||||||    
T  27197734 tttttagaaaattgaattaacaacatgatagatgatcatataatactttaaatatacttaatttattttaaaaaaatatgttacattgttcgtaatttaa 27197833  T
Q  318 aaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    |||||||||||||| |||||  || ||||| |||  ||||| ||||| |||||||||||    
T  27197834 aaaataaaagtgagtcctcctttctcttcctctcttaaaccttcaattcaaacacaccc 27197892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 195 - 338
Target Start/End: Original strand, 42699669 - 42699817
Alignment:
Q  195 tttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaattta-----aa 289  Q
    ||||||| |||  ||||||||||||| | ||||| |||||||||||| ||  ||||| ||||||||| |||||||||||||||||||||||||      |    
T  42699669 tttttaaattatggacattataaaataaattttagaaaattgaattatcaatatgataaatgatcatataatacttcaaaaacacttaatttatttttta 42699768  T
Q  290 aagacattttacattgttcgtaatttaaaaaataaaagtgagccctccc 338  Q
    || | |||||| |||||||||||||||||||  ||||||||| ||||||    
T  42699769 aaaatattttatattgttcgtaatttaaaaacaaaaagtgagtcctccc 42699817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 294 - 376
Target Start/End: Original strand, 34641151 - 34641233
Alignment:
Q  294 cattttacattgttcgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    ||||||| | ||| |||||||||||||| |||||| ||||||||| ||||||||||||| |||||||| ||||||||||||||    
T  34641151 cattttataatgtccgtaatttaaaaaagaaaagtaagccctcccctcccttcccctcctaaaccctccatccaaacacaccc 34641233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 209 - 312
Target Start/End: Complemental strand, 36727349 - 36727242
Alignment:
Q  209 acattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacactta---atttaaaaag-acattttacatt 304  Q
    |||||||||||| ||||| | |||||| | |||||| |||||| ||| ||||| ||||||||||||||||||||   |||| ||||| ||||||||||||    
T  36727349 acattataaaataattttaagaaaattaacttaacaacatgataaattatcatataatacttcaaaaacacttatttattttaaaagaacattttacatt 36727250  T
Q  305 gttcgtaa 312  Q
    ||| ||||    
T  36727249 gttagtaa 36727242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 284 - 376
Target Start/End: Complemental strand, 24560310 - 24560218
Alignment:
Q  284 tttaaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    |||| ||| |||| |||||| || |||||||||||||| ||||   | ||||||| ||||||||||||| ||||||| |||||||||||||||    
T  24560310 tttagaaaaacatgttacatagtccgtaatttaaaaaagaaaaacaaaccctcccctcccttcccctcctaaacccttaatccaaacacaccc 24560218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 308 - 376
Target Start/End: Original strand, 28582684 - 28582752
Alignment:
Q  308 cgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    |||||||||||||| |||||| | ||||||| ||||||||||||| ||| ||||| |||||||||||||    
T  28582684 cgtaatttaaaaaagaaaagtaaaccctcccctcccttcccctcctaaatcctcagtccaaacacaccc 28582752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 141 - 371
Target Start/End: Original strand, 54985696 - 54985943
Alignment:
Q  141 tttattaagggtgtgtttgggaagagggtttaggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaatt 240  Q
    |||| |||| ||||||||||   |||||||||| ||| ||| |||||  || | ||||||| |||  ||||||||||| ||||||||| |||||||||||    
T  54985696 tttactaagagtgtgtttggattgagggtttagaaggagagagcttagttttcgtttttaaattacggacattataaattgatttttagaaaattgaatt 54985795  T
Q  241 aacagcatgat-------caatgatcatgtaatacttc-----aaaaacacttaattta-----aaaagacattttacattgttcgtaatttaaaaaata 323  Q
    ||||  |||||        ||||||||| |||||||||     ||||||||||||||||     |||  ||||||||||||  | ||||||||||||||     
T  54985796 aacaatatgataaatgaataatgatcatataatacttcaaaaaaaaaacacttaatttattttgaaagaacattttacattagttgtaatttaaaaaatt 54985895  T
Q  324 aaagtgagccctcccatcccttcccctccaaaaccctcaatccaaaca 371  Q
    |||  ||   ||| |||| |||||||| | ||||||||||||||||||    
T  54985896 aaaacgaattctctcatctcttccccttctaaaccctcaatccaaaca 54985943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 297 - 376
Target Start/End: Original strand, 5961933 - 5962011
Alignment:
Q  297 tttacattgttcgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    ||||||||||| ||||||| ||||| ||||||||| | || | |||||| |||||| ||||||||||| |||||||||||    
T  5961933 tttacattgtttgtaattttaaaaacaaaagtgagtcttcacctccctt-ccctcctaaaccctcaatacaaacacaccc 5962011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 309 - 376
Target Start/End: Original strand, 24560393 - 24560460
Alignment:
Q  309 gtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    ||||||||||||  |||||| | | ||||||||| ||||||||| |||||||| ||||||||||||||    
T  24560393 gtaatttaaaaatgaaaagtaaactctcccatccgttcccctcctaaaccctccatccaaacacaccc 24560460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 294 - 376
Target Start/End: Original strand, 24253883 - 24253965
Alignment:
Q  294 cattttacattgttcgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    ||||||| | ||| |||||||||||||| |||||| |  ||| || ||||||||||| | |||||||| ||||||||||||||    
T  24253883 cattttataatgtccgtaatttaaaaaagaaaagtaaatccttccctcccttccccttctaaaccctccatccaaacacaccc 24253965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 208 - 269
Target Start/End: Complemental strand, 55428553 - 55428492
Alignment:
Q  208 gacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatact 269  Q
    ||||||| || |||||||||| ||||||||||||||| | |||| ||||||||| |||||||    
T  55428553 gacattacaagatgatttttagaaaattgaattaacaacgtgataaatgatcatataatact 55428492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 308 - 373
Target Start/End: Original strand, 55428554 - 55428619
Alignment:
Q  308 cgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacaca 373  Q
    ||||||||||| || |||||| |  | |||| ||||||||||||| ||||||||||||||||||||    
T  55428554 cgtaatttaaagaagaaaagtaaatcatcccctcccttcccctcctaaaccctcaatccaaacaca 55428619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 284 - 376
Target Start/End: Original strand, 220548 - 220640
Alignment:
Q  284 tttaaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    |||| ||| |||| |||||| || |||||||||||||| |||||| |   ||||| ||||||| ||||| |||||||| ||||||||| ||||    
T  220548 tttagaaaaacatgttacatagtccgtaatttaaaaaagaaaagtaaattctcccctcccttctcctcctaaaccctccatccaaacagaccc 220640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 295 - 375
Target Start/End: Original strand, 26135959 - 26136039
Alignment:
Q  295 attttacattgttcgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacacc 375  Q
    |||||| | ||| |||||||||||||| |||||| | ||||||  ||||||||||||| |||||||| || ||| ||||||    
T  26135959 attttataatgtccgtaatttaaaaaagaaaagtaaaccctccactcccttcccctcctaaaccctccattcaatcacacc 26136039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 144 - 232
Target Start/End: Original strand, 37102155 - 37102243
Alignment:
Q  144 attaagggtgtgtttgggaagagggtttaggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaa 232  Q
    |||||||||||||||||   |||||||||||||||||||| |||  || | ||||||| |||  |||| ||| ||||| ||||||||||    
T  37102155 attaagggtgtgtttggatggagggtttaggaggggagggtttagttttcatttttaaattacggacactatgaaatgttttttaaaaa 37102243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 376
Target Start/End: Original strand, 41110496 - 41110564
Alignment:
Q  308 cgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    |||||||||||||  |||||| | || |||  ||||||||||||  |||||||||||||||||||||||    
T  41110496 cgtaatttaaaaacgaaaagtaaaccttcctctcccttcccctcacaaaccctcaatccaaacacaccc 41110564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 372
Target Start/End: Complemental strand, 52473984 - 52473920
Alignment:
Q  308 cgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacac 372  Q
    |||||||||||||| |||| ||| | |||||||  |||||||||| |||| ||||||||||||||    
T  52473984 cgtaatttaaaaaagaaaattgaactctcccatttcttcccctcccaaactctcaatccaaacac 52473920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 376
Target Start/End: Original strand, 37102348 - 37102382
Alignment:
Q  342 ccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    ||||||||||| |||||||||||||||||||||||    
T  37102348 ccttcccctcctaaaccctcaatccaaacacaccc 37102382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 310 - 371
Target Start/End: Complemental strand, 27541998 - 27541937
Alignment:
Q  310 taatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaaca 371  Q
    |||||||||||  ||| |||| || || | ||||||||||||| ||||||||||||||||||    
T  27541998 taatttaaaaatgaaatgtgaaccatctcctcccttcccctcctaaaccctcaatccaaaca 27541937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 148 - 376
Target Start/End: Original strand, 30200098 - 30200338
Alignment:
Q  148 agggtgtgtttgggaagagggtttaggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattga---attaaca 244  Q
    |||||||||||||   |||||||||||||||||||| |||  || | ||||||| |||  |||| ||| ||||| |||||||||| || |   |||||||    
T  30200098 agggtgtgtttggatggagggtttaggaggggagggtttagttttcatttttaaattacggacactatgaaatgttttttaaaaagtttacatattaaca 30200197  T
Q  245 gcatgatcaatgatcatgtaatacttcaaaaacac-----ttaatttaaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctccca 339  Q
      || | ||| |||||| || ||||| ||  ||||     ||| |||| ||| |||| ||| || || |||||||||||||| |||||| | |||| ||     
T  30200198 taataaacaacgatcatatagtactttaatcacacttgatttattttagaaaaacatgttatatagtccgtaatttaaaaaagaaaagtaaacccttccc 30200297  T
Q  340 tcccttcccctccaaaa----ccctcaatccaaacacaccc 376  Q
    ||||||||||||| | |    ||||||||||||||||||||    
T  30200298 tcccttcccctcctataccctccctcaatccaaacacaccc 30200338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 253 - 373
Target Start/End: Complemental strand, 46205015 - 46204890
Alignment:
Q  253 aatgatcatgtaatacttcaaaaacacttaatttaa-----aaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccatcccttcc 347  Q
    ||||||||| |||||||||||  ||||||||||||      ||| |||| ||| || |||| |||||||||||| |||||| | | ||| |||| ||||     
T  46205015 aatgatcatataatacttcaatcacacttaatttattttagaaaaacatgttatatagttcataatttaaaaaagaaaagtaaacactctcatctcttct 46204916  T
Q  348 cctccaaaaccctcaatccaaacaca 373  Q
    ||| | |||||||| |||||||||||    
T  46204915 cctgctaaaccctcgatccaaacaca 46204890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 339 - 376
Target Start/End: Original strand, 54574562 - 54574599
Alignment:
Q  339 atcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    |||||||||| ||| |||||||||||||||||||||||    
T  54574562 atcccttcccttcctaaaccctcaatccaaacacaccc 54574599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 376
Target Start/End: Complemental strand, 18654645 - 18654601
Alignment:
Q  332 ccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    |||||||||| ||| |||||| |||||||| ||||||||||||||    
T  18654645 ccctcccatctctttccctcctaaaccctccatccaaacacaccc 18654601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 334 - 374
Target Start/End: Original strand, 18654802 - 18654842
Alignment:
Q  334 ctcccatcccttcccctccaaaaccctcaatccaaacacac 374  Q
    ||||| ||||||||||||| ||||||||||| |||||||||    
T  18654802 ctcccctcccttcccctcctaaaccctcaattcaaacacac 18654842  T

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Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 308 - 376
Target Start/End: Complemental strand, 21773851 - 21773783
Alignment:
Q  308 cgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    ||||||||| |||| ||||||   |||| || ||||||||||||| ||||| |||||||||||| ||||    
T  21773851 cgtaatttagaaaagaaaagtatacccttccttcccttcccctcctaaaccttcaatccaaacataccc 21773783  T

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Target: scaffold0026 (Bit Score: 92; Significance: 1e-44; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 208 - 376
Target Start/End: Original strand, 1467 - 1641
Alignment:
Q  208 gacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaatttaa------aaagacattttac 301  Q
    ||||||||| ||||||||||| ||||||||||||||| | |||| ||||||||| |||||||| ||||| ||||||||||       ||| |||||||||    
T  1467 gacattatagaatgatttttagaaaattgaattaacaacttgataaatgatcatataatacttaaaaaatacttaatttatttaaagaaaaacattttac 1566  T
Q  302 attgttcgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    ||||||||||||||||||||||||||||||||||||| ||| |||| |||| ||||||||||| |||||||||||    
T  1567 attgttcgtaatttaaaaaataaaagtgagccctcccctccattcctctcctaaaccctcaattcaaacacaccc 1641  T

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Target: scaffold0026; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 293 - 374
Target Start/End: Complemental strand, 1256 - 1175
Alignment:
Q  293 acattttacattgttcgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacac 374  Q
    |||| |||||| || |||||||||||||| |||||| | | ||||| || |||||||||| |||||||||||||||||||||    
T  1256 acatgttacatagtccgtaatttaaaaaagaaaagtaaactctcccctctcttcccctcctaaaccctcaatccaaacacac 1175  T

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Target: scaffold0119 (Bit Score: 85; Significance: 2e-40; HSPs: 2)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 193 - 376
Target Start/End: Complemental strand, 37572 - 37384
Alignment:
Q  193 cttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacacttaattta----- 287  Q
    ||||||||| ||| ||||| ||||| |||||||||| |||| | |||||||| |||||| | ||||||| ||| ||||||||||||||| |||||         
T  37572 cttttttaaattacagacaatataagatgatttttagaaaacttaattaacaacatgataagtgatcatataacacttcaaaaacacttgatttatttta 37473  T
Q  288 aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||| | |||| |||||| ||| ||||||| ||||| |||||    
T  37472 aaaaaacattttacattgttcgtaatttaaaaaataaaagtgagccctccccttccttgccctcctaaatcctcaattcaaacgcaccc 37384  T

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Target: scaffold0119; HSP #2
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 255 - 376
Target Start/End: Complemental strand, 30843 - 30716
Alignment:
Q  255 tgatcatgtaatacttcaaaaacacttaattta------aaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccatcccttccc 348  Q
    ||||||| ||| |||||||||||||||||||||      |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||  |    
T  30843 tgatcatataacacttcaaaaacacttaatttatttaaaaaaaaacattttacattgttcgtaatttaaaaaataaaagtgagccctcccctcccttgtc 30744  T
Q  349 ctccaaaaccctcaatccaaacacaccc 376  Q
    |||| ||| ||||||||||||| |||||    
T  30743 ctcctaaatcctcaatccaaacgcaccc 30716  T

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Target: scaffold0071 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 143 - 342
Target Start/End: Complemental strand, 53122 - 52921
Alignment:
Q  143 tattaagggtgtgtttgggaagagggtttaggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaa 242  Q
    ||||||||||||||||||   ||||||||||||||  |  |  ||| || ||||||||| |||  | |||||| |||||||||||  ||||||||| |||    
T  53122 tattaagggtgtgtttggatggagggtttaggaggacaatg--tacttttcttttttaaattatgggcattatgaaatgattttttgaaaattgaactaa 53025  T
Q  243 cagcatgatcaatgatcatgtaatacttcaaaaacactta----atttaaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctccc 338  Q
    || |||||| ||||||||| ||||| ||||||||||||||    ||||||||| | ||||||||||||| ||||||||||||||||||||||| | ||||    
T  53024 caacatgataaatgatcatataatatttcaaaaacacttaatgtatttaaaaaaatattttacattgtttgtaatttaaaaaataaaagtgagtcttccc 52925  T
Q  339 atcc 342  Q
    ||||    
T  52924 atcc 52921  T

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Target: scaffold0007 (Bit Score: 59; Significance: 7e-25; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 173 - 287
Target Start/End: Complemental strand, 242425 - 242311
Alignment:
Q  173 ggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttca 272  Q
    ||||||||||| |||| || ||||||||| |||  ||||||||||||||||||||||||||||||||||||  |||||| |||||| || ||||| ||||    
T  242425 ggaggggagggtttacttttcttttttaaattacggacattataaaatgatttttaaaaaattgaattaacgacatgataaatgatgatataataattca 242326  T
Q  273 aaaacacttaattta 287  Q
    |||| |||| |||||    
T  242325 aaaatacttcattta 242311  T

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Target: scaffold0007; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 294 - 373
Target Start/End: Original strand, 242377 - 242456
Alignment:
Q  294 cattttacattgttcgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacaca 373  Q
    ||||||| | ||| |||||||||||||| |||||| | ||||||| |||||||||||   ||||| || |||||||||||    
T  242377 cattttataatgtccgtaatttaaaaaagaaaagtaaaccctcccctcccttccccttataaaccatccatccaaacaca 242456  T

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Target: scaffold0012 (Bit Score: 54; Significance: 7e-22; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 193 - 338
Target Start/End: Complemental strand, 184796 - 184640
Alignment:
Q  193 cttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttca-aaaacacttaattt----- 286  Q
    ||||||||| |||  ||||||||||||||||||||  ||||||||||||||| ||||||  || ||||| |||||||||| ||||||||||||||         
T  184796 cttttttaaattatggacattataaaatgatttttttaaaattgaattaacaacatgatatattatcatataatacttcaaaaaacacttaatttattta 184697  T
Q  287 -----aaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctccc 338  Q
         ||||| |||||||| || |||| ||||||||||||||||||||| |||||||    
T  184696 aaaaaaaaaaaacattttatatagttcataatttaaaaaataaaagtgaaccctccc 184640  T

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Target: scaffold0012; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 310 - 373
Target Start/End: Original strand, 184784 - 184847
Alignment:
Q  310 taatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacaca 373  Q
    |||||||||||| || ||| | ||||||| |||||| |||||| |||||||| |||||||||||    
T  184784 taatttaaaaaagaatagtaaaccctcccttccctttccctcctaaaccctccatccaaacaca 184847  T

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Target: scaffold1414 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold1414
Description:

Target: scaffold1414; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 211 - 322
Target Start/End: Complemental strand, 473 - 355
Alignment:
Q  211 attataaaatgatttttaaaaaattgaa-ttaacagcatgatcaatgatcatgtaatacttcaaaaacacttaat------ttaaaaagacattttacat 303  Q
    |||||||||||||||||| |||||| || ||||||||||||| |||||| ||  |||||||||||||||||||||      | ||||| ||||||||| |    
T  473 attataaaatgatttttagaaaattaaaattaacagcatgataaatgataataaaatacttcaaaaacacttaattatttataaaaaaaacattttacgt 374  T
Q  304 tgttcgtaatttaaaaaat 322  Q
    |||||||||| ||||||||    
T  373 tgttcgtaatataaaaaat 355  T

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Target: scaffold0067 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 284 - 376
Target Start/End: Original strand, 39341 - 39433
Alignment:
Q  284 tttaaaaagacattttacattgttcgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    |||| ||| |||| |||||| || |||||||||||||| |||||| | ||||||| |||||| |||| | |||||||||||||||||||||||    
T  39341 tttagaaaaacatgttacatagtccgtaatttaaaaaagaaaagtaaaccctcccctccctttcccttctaaaccctcaatccaaacacaccc 39433  T

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Target: scaffold0240 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 193 - 282
Target Start/End: Complemental strand, 17729 - 17640
Alignment:
Q  193 cttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaaaaacactta 282  Q
    ||||||||| ||| | | |||||||||||||||||  |||||||||||| || |||||| ||| ||||| |||||||||||| |||||||    
T  17729 cttttttaaattacaaatattataaaatgattttttgaaaattgaattagcaacatgataaataatcatataatacttcaaatacactta 17640  T

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Target: scaffold0240; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 309 - 376
Target Start/End: Original strand, 17716 - 17781
Alignment:
Q  309 gtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    ||||||||||||| |||||| | ||| ||  |||||||| |||| |||||||| ||||||||||||||    
T  17716 gtaatttaaaaaagaaaagtaaacccccc--tcccttccactcctaaaccctccatccaaacacaccc 17781  T

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Target: scaffold0198 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 309 - 374
Target Start/End: Complemental strand, 3215 - 3150
Alignment:
Q  309 gtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacac 374  Q
    ||||||||||||| |||||| | | ||||| ||||||||||||| |||| ||||||||||||||||    
T  3215 gtaatttaaaaaagaaaagtaaactctcccctcccttcccctcctaaactctcaatccaaacacac 3150  T

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Target: scaffold0096 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 309 - 376
Target Start/End: Complemental strand, 6652 - 6585
Alignment:
Q  309 gtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    ||||||||||||| |||||| | ||||||| ||||||| ||||| ||| | |||||||||||||||||    
T  6652 gtaatttaaaaaagaaaagtaaaccctcccctcccttctcctcctaaaacttcaatccaaacacaccc 6585  T

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Target: scaffold0262 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 304 - 376
Target Start/End: Complemental strand, 16369 - 16297
Alignment:
Q  304 tgttcgtaatttaaaaaataaaagtgagccctcccatcccttcccctccaaaaccctcaatccaaacacaccc 376  Q
    ||||| |||||||||||  |||||| | ||||||| ||| || |||||| |||||||| ||||||||| ||||    
T  16369 tgttcataatttaaaaatgaaaagtaaaccctcccctccttttccctcctaaaccctccatccaaacaaaccc 16297  T

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Target: scaffold0006 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 225 - 273
Target Start/End: Original strand, 81498 - 81546
Alignment:
Q  225 tttaaaaaattgaattaacagcatgatcaatgatcatgtaatacttcaa 273  Q
    |||||||||||||| ||| | |||||| ||||||||| |||||||||||    
T  81498 tttaaaaaattgaaataataacatgataaatgatcatataatacttcaa 81546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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