View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1614_low_47 (Length: 366)
Name: NF1614_low_47
Description: NF1614
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1614_low_47 |
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Alignment Details
Target: chr7 (Bit Score: 334; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 334; E-Value: 0
Query Start/End: Original strand, 16 - 349
Target Start/End: Original strand, 48099698 - 48100031
Alignment:
| Q |
16 |
attattctaatctaagttttctttctctcatttttgatcgccacttctcatgagaatcacacgtcttagtaaaaactttgcattaggaatgaaaaaatta |
115 |
Q |
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| T |
48099698 |
attattctaatctaagttttctttctctcatttttgatcgccacttctcatgagaatcacacgtcttagtaaaaactttgcattaggaatgaaaaaatta |
48099797 |
T |
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| Q |
116 |
aaagtgagagacattgtggcaactggaaaagtggcaatatggtctatgaagtgcttttcacggaagtatttagctagaatatccaataattcgtgacaag |
215 |
Q |
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| T |
48099798 |
aaagtgagagacattgtggcaactggaaaagtggcaatatggtctatgaagtgcttttcacggaagtatttagctagaatatccaataattcgtgacaag |
48099897 |
T |
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| Q |
216 |
agtatagttttattggttgttgtattaaaagcatgcgtcaaccataggaaacataccttgttttcactttttccttcttacattttttgtatgcttttgg |
315 |
Q |
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| T |
48099898 |
agtatagttttattggttgttgtattaaaagcatgcgtcaaccataggaaacataccttgttttcactttttccttcttacattttttgtatgcttttgg |
48099997 |
T |
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| Q |
316 |
gcggcggaaattatttcttattgcatttccattc |
349 |
Q |
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|||||||||||||||||||||||||||||||||| |
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| T |
48099998 |
gcggcggaaattatttcttattgcatttccattc |
48100031 |
T |
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