View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1614_low_59 (Length: 336)
Name: NF1614_low_59
Description: NF1614
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1614_low_59 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 288; Significance: 1e-161; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 288; E-Value: 1e-161
Query Start/End: Original strand, 1 - 336
Target Start/End: Original strand, 32223653 - 32223995
Alignment:
| Q |
1 |
cactaacccctatgcaattaaacttaactctggtttactcactccccattcacatacagccacattcatagtcatacacatcactaactatacctagcaa |
100 |
Q |
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| T |
32223653 |
cactaacccctatgcaattaaacttaactctggtttactcactccccattcacatacagccacattcatagtcatacacatcactaactatacctagcaa |
32223752 |
T |
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| Q |
101 |
ttaagctacattatcattattcaaagaaaaagccaaaacaaaattaaaacaaccaatgaatccggtcataacatttggttcatattcacaagtatatgta |
200 |
Q |
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| T |
32223753 |
ttaagctacattatcattattcaaagaaaaagccaaaacaaaattaaaacaaccaatgaatccggtcataacatttggttcatattcacaagtatatgta |
32223852 |
T |
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| Q |
201 |
tgtatgta-------ctatagttgagagactaataacttaacttacccattacccataacccatttacagctaagaacttgtcatgnnnnnnntatcatg |
293 |
Q |
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|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
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| T |
32223853 |
tgtatgtatgtactactatagttgagagactaataacttaacttacccattacccataacccatttacagctaagaacttgtcatgaaaaaaatatcatg |
32223952 |
T |
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| Q |
294 |
atggtaaaagtaaagggagaggattgaatacagaatgaacaaa |
336 |
Q |
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|||||||||||||||||||||||||||||||||| || ||||| |
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| T |
32223953 |
atggtaaaagtaaagggagaggattgaatacagattgcacaaa |
32223995 |
T |
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