View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1614_low_92 (Length: 268)

Name: NF1614_low_92
Description: NF1614
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1614_low_92
NF1614_low_92
[»] chr4 (4 HSPs)
chr4 (5-250)||(54147961-54148206)
chr4 (8-219)||(24225768-24225980)
chr4 (8-127)||(16871459-16871579)
chr4 (16-97)||(7259037-7259119)
[»] chr6 (12 HSPs)
chr6 (8-139)||(33424163-33424294)
chr6 (131-250)||(28063340-28063459)
chr6 (8-127)||(28063182-28063302)
chr6 (15-125)||(13098053-13098163)
chr6 (8-80)||(21862421-21862493)
chr6 (12-81)||(18984353-18984422)
chr6 (8-97)||(9290823-9290913)
chr6 (10-79)||(2131735-2131804)
chr6 (169-233)||(33424299-33424363)
chr6 (29-95)||(9365292-9365358)
chr6 (24-92)||(3900634-3900702)
chr6 (11-54)||(10741661-10741704)
[»] chr5 (7 HSPs)
chr5 (8-127)||(24137405-24137525)
chr5 (8-137)||(9512260-9512386)
chr5 (22-87)||(11320618-11320683)
chr5 (158-234)||(9512187-9512263)
chr5 (8-76)||(27315112-27315180)
chr5 (22-75)||(16404772-16404825)
chr5 (25-73)||(39440134-39440182)
[»] chr7 (16 HSPs)
chr7 (123-234)||(21814149-21814260)
chr7 (8-127)||(46963247-46963367)
chr7 (8-127)||(24486659-24486777)
chr7 (8-97)||(15614433-15614523)
chr7 (8-102)||(17921382-17921476)
chr7 (8-127)||(3902051-3902170)
chr7 (8-97)||(3889589-3889678)
chr7 (12-127)||(44338858-44338974)
chr7 (8-97)||(3890039-3890128)
chr7 (8-64)||(26403374-26403430)
chr7 (11-80)||(11828103-11828174)
chr7 (8-100)||(21814264-21814355)
chr7 (120-195)||(11828249-11828324)
chr7 (145-234)||(10236744-10236835)
chr7 (129-196)||(24486813-24486880)
chr7 (33-75)||(37840468-37840510)
[»] chr3 (9 HSPs)
chr3 (123-234)||(16462689-16462800)
chr3 (8-103)||(22821042-22821137)
chr3 (15-100)||(50296119-50296205)
chr3 (12-79)||(34338082-34338149)
chr3 (8-97)||(42531128-42531218)
chr3 (8-100)||(16462804-16462895)
chr3 (26-75)||(46573941-46573990)
chr3 (10-80)||(2593274-2593343)
chr3 (11-91)||(29555910-29555989)
[»] chr2 (7 HSPs)
chr2 (8-102)||(8986760-8986855)
chr2 (12-127)||(38583677-38583793)
chr2 (8-80)||(32291010-32291082)
chr2 (14-127)||(1172950-1173064)
chr2 (8-122)||(42633119-42633233)
chr2 (12-102)||(20593595-20593683)
chr2 (144-234)||(2484652-2484744)
[»] chr8 (6 HSPs)
chr8 (8-103)||(5616762-5616857)
chr8 (12-127)||(20242535-20242651)
chr8 (12-127)||(20250509-20250625)
chr8 (8-97)||(16578965-16579054)
chr8 (31-97)||(16583729-16583794)
chr8 (27-60)||(30176366-30176399)
[»] chr1 (8 HSPs)
chr1 (8-125)||(11993440-11993556)
chr1 (8-125)||(2071713-2071832)
chr1 (8-92)||(10354204-10354288)
chr1 (23-79)||(15629549-15629605)
chr1 (8-78)||(2075243-2075314)
chr1 (8-94)||(3774499-3774586)
chr1 (53-122)||(370565-370634)
chr1 (27-73)||(29958913-29958959)
[»] scaffold0499 (1 HSPs)
scaffold0499 (15-125)||(7045-7155)
[»] scaffold0007 (1 HSPs)
scaffold0007 (12-76)||(14440-14504)
[»] scaffold0025 (1 HSPs)
scaffold0025 (49-103)||(154713-154767)
[»] scaffold0018 (1 HSPs)
scaffold0018 (22-80)||(31956-32014)
[»] scaffold0048 (1 HSPs)
scaffold0048 (10-74)||(62017-62081)


Alignment Details
Target: chr4 (Bit Score: 214; Significance: 1e-117; HSPs: 4)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 5 - 250
Target Start/End: Complemental strand, 54148206 - 54147961
Alignment:
Q  5 tagtaaataatataaacttctaacactacccctcaagctgaagcttactaagctttaagcttgttacaaattaaccccaaaaataaaccaaattagctcg 104  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  54148206 tagtaaataatataaacttttaacactacccctcaagctgaagcttactaagctttaagcttgttacaaattaaccccaaaaataaaccaaattagcttg 54148107  T
Q  105 tagcataacgaatgaagagcagccagaatcatcaatcagccaaagagagaaatcatccaagtagaagaaccatttcaaactaaaccaaacaaaaattggt 204  Q
    ||| ||||||||||||||||||| |||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  54148106 tagtataacgaatgaagagcagcaagaaccatcaatcagccaaagagagaaattatccaagtagaagaaccatttcaaactaaaccaaacaaaaattggt 54148007  T
Q  205 agggagaagcaaccatatagaagaaccaatcgagagaaaaacaacc 250  Q
    ||||||||||||||||| ||||||||||||||||||| ||||||||    
T  54148006 agggagaagcaaccatacagaagaaccaatcgagagagaaacaacc 54147961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 8 - 219
Target Start/End: Complemental strand, 24225980 - 24225768
Alignment:
Q  8 taaataatataaacttctaacactacccctcaagctgaagcttactaagctttaagcttgttacaaattaaccccaaaaataaaccaaattagctcgtag 107  Q
    ||||||||||||||||| |||||||||||| ||| | |||||||||||| || |||||  ||||||||||||| | |||||||||||||| ||||  ||     
T  24225980 taaataatataaacttcgaacactacccctgaagttaaagcttactaagtttgaagctcattacaaattaacctcgaaaataaaccaaatcagctgataa 24225881  T
Q  108 cataacgaatgaagagcagccagaatcatcaatcagccaaagagagaaatcatcc-aagtagaagaaccatttcaaactaaaccaaacaaaaattggtag 206  Q
    |||||  |||||||||||||  ||| || |||||| |||||||||| || ||||| ||  | ||||||||||||||| |||||||||||| ||| |||||    
T  24225880 cataatcaatgaagagcagcaggaaccaccaatcaaccaaagagagtaaccatccaaaacataagaaccatttcaaattaaaccaaacaagaatcggtag 24225781  T
Q  207 ggagaagcaacca 219  Q
    |||||| ||||||    
T  24225780 ggagaaacaacca 24225768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 8 - 127
Target Start/End: Complemental strand, 16871579 - 16871459
Alignment:
Q  8 taaataatataaacttctaacactacccctcaagctgaagcttactaagctttaagcttgttacaaattaacc-ccaaaaataaaccaaattagctcgta 106  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||   ||||||||||||||| ||||   |    
T  16871579 taaataatataaagttctaacactacccctcaagctgaagcttactaagctttaaacttgttacaaattaaccaagaaaaataaaccaaatcagctgtca 16871480  T
Q  107 gcataacgaatgaagagcagc 127  Q
    ||| ||| |||| ||||||||    
T  16871479 gcaaaaccaatggagagcagc 16871459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 7259037 - 7259119
Alignment:
Q  16 ataaacttctaacacta-cccctcaagctgaagcttactaagctttaagcttgttacaaattaaccccaaaaataaaccaaat 97  Q
    |||| ||||||||| || |||||||||||||| ||||||||| |||||||||||||||||||||||   |||||||| |||||    
T  7259037 ataagcttctaacaatatcccctcaagctgaaacttactaagttttaagcttgttacaaattaaccaggaaaataaatcaaat 7259119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 88; Significance: 2e-42; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 8 - 139
Target Start/End: Original strand, 33424163 - 33424294
Alignment:
Q  8 taaataatataaacttctaacactacccctcaagctgaagcttactaagctttaagcttgttacaaattaaccccaaaaataaaccaaattagctcgtag 107  Q
    ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||| |||||||||||||| ||  ||||||||||||||||||||||||    
T  33424163 taaataatataaagttctaacactacccctcaagttgaagcttactaagctttaagtttgttacaaattaatccagaaaataaaccaaattagctcgtag 33424262  T
Q  108 cataacgaatgaagagcagccagaatcatcaa 139  Q
    || ||| |||||||||| || |||| ||||||    
T  33424263 cacaaccaatgaagagcggcaagaaccatcaa 33424294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 131 - 250
Target Start/End: Original strand, 28063340 - 28063459
Alignment:
Q  131 aatcatcaatcagccaaagagagaaatcatccaagtagaagaaccatttcaaactaaaccaaacaaaaattggtagggagaagcaaccatatagaagaac 230  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  ||  ||||||||||||||||||| | ||||||    
T  28063340 aatcatcaaccagccaaagagagaaatcatccaagcagaagaaccatttcaaactaaaccaaacaagcatcagtagggagaagcaaccatacaaaagaac 28063439  T
Q  231 caatcgagagaaaaacaacc 250  Q
    |||| || ||| ||||||||    
T  28063440 caattgatagagaaacaacc 28063459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 8 - 127
Target Start/End: Original strand, 28063182 - 28063302
Alignment:
Q  8 taaataatataaacttctaacactacccctcaagctgaagcttactaagctttaagcttgttacaaattaaccc-caaaaataaaccaaattagctcgta 106  Q
    ||||||||||||| |||||||||| ||||||||| ||||| |||||||||||||||||||||||||||||||||  ||||||||||||||| ||||  ||    
T  28063182 taaataatataaagttctaacacttcccctcaagatgaagtttactaagctttaagcttgttacaaattaacccagaaaaataaaccaaatcagctgata 28063281  T
Q  107 gcataacgaatgaagagcagc 127  Q
    ||||||| |||  ||||||||    
T  28063282 gcataaccaatagagagcagc 28063302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 15 - 125
Target Start/End: Complemental strand, 13098163 - 13098053
Alignment:
Q  15 tataaacttctaacactacccctcaagctgaagcttactaagctttaagcttgttacaaattaaccccaaaaataaaccaaattagctcgtagcataacg 114  Q
    ||||||||||||||||||||||| ||||| | |||||||||| |||||||| |||||||||||||||  |||||||||||||| ||||| | ||||||      
T  13098163 tataaacttctaacactaccccttaagctaaggcttactaaggtttaagctcgttacaaattaaccctgaaaataaaccaaatcagctcatggcataatc 13098064  T
Q  115 aatgaagagca 125  Q
    |||||||||||    
T  13098063 aatgaagagca 13098053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 8 - 80
Target Start/End: Complemental strand, 21862493 - 21862421
Alignment:
Q  8 taaataatataaacttctaacactacccctcaagctgaagcttactaagctttaagcttgttacaaattaacc 80  Q
    ||||||||||||| |||||||||| |||||||||||||||| |||||| ||||||||||||||||||||||||    
T  21862493 taaataatataaagttctaacacttcccctcaagctgaagcatactaaactttaagcttgttacaaattaacc 21862421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 12 - 81
Target Start/End: Complemental strand, 18984422 - 18984353
Alignment:
Q  12 taatataaacttctaacactacccctcaagctgaagcttactaagctttaagcttgttacaaattaaccc 81  Q
    ||||||||| ||||||||| |||||||||||| |||||||||||| ||||||||||||||||||||||||    
T  18984422 taatataaaattctaacaccacccctcaagctaaagcttactaaggtttaagcttgttacaaattaaccc 18984353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 8 - 97
Target Start/End: Original strand, 9290823 - 9290913
Alignment:
Q  8 taaataatataaacttctaacactacccctcaagctgaagcttactaagctttaagcttgttacaaattaacc-ccaaaaataaaccaaat 97  Q
    ||||||||||||| |||||||| ||| ||| ||||||||| |||| |||||||||||||||||||||||||||   |||||||||||||||    
T  9290823 taaataatataaagttctaacattactcctgaagctgaagtttaccaagctttaagcttgttacaaattaacctaaaaaaataaaccaaat 9290913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 10 - 79
Target Start/End: Original strand, 2131735 - 2131804
Alignment:
Q  10 aataatataaacttctaacactacccctcaagctgaagcttactaagctttaagcttgttacaaattaac 79  Q
    ||||||||||||| |||| | ||||| ||||| |||||||||||||||||||||||||||||||||||||    
T  2131735 aataatataaactcctaatattacccttcaagttgaagcttactaagctttaagcttgttacaaattaac 2131804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 169 - 233
Target Start/End: Original strand, 33424299 - 33424363
Alignment:
Q  169 aagaaccatttcaaactaaaccaaacaaaaattggtagggagaagcaaccatatagaagaaccaa 233  Q
    |||||||||||||||||||||||||||| ||| |||| ||||||||||||||| |||||||||||    
T  33424299 aagaaccatttcaaactaaaccaaacaagaatcggtaaggagaagcaaccatagagaagaaccaa 33424363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 29 - 95
Target Start/End: Original strand, 9365292 - 9365358
Alignment:
Q  29 actacccctcaagctgaagcttactaagctttaagcttgttacaaattaaccccaaaaataaaccaa 95  Q
    ||||||||||||| | ||||||||||| |||||| ||| ||||||||||||||  ||||||||||||    
T  9365292 actacccctcaagttaaagcttactaaactttaaacttattacaaattaaccctgaaaataaaccaa 9365358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 24 - 92
Target Start/End: Complemental strand, 3900702 - 3900634
Alignment:
Q  24 ctaacactacccctcaagctgaagcttactaagctttaagcttgttacaaattaaccccaaaaataaac 92  Q
    ||||||||||||||||| |  |||||||||||||||||| |||||| | |||||||||  |||||||||    
T  3900702 ctaacactacccctcaatccaaagcttactaagctttaaacttgttgcgaattaacccttaaaataaac 3900634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 11 - 54
Target Start/End: Complemental strand, 10741704 - 10741661
Alignment:
Q  11 ataatataaacttctaacactacccctcaagctgaagcttacta 54  Q
    |||||||||| ||||||| |||||||||||||||||||| ||||    
T  10741704 ataatataaagttctaacgctacccctcaagctgaagctcacta 10741661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 81; Significance: 3e-38; HSPs: 7)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 8 - 127
Target Start/End: Complemental strand, 24137525 - 24137405
Alignment:
Q  8 taaataatataaacttctaacactacccctcaagctgaagcttactaagctttaagcttgttacaaattaaccc-caaaaataaaccaaattagctcgta 106  Q
    ||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||  ||||||||||||||| ||||  ||    
T  24137525 taaataatataaagttctaacactacccctcaagctaaagcttactaagctttaagcttgttacaaattaacccagaaaaataaaccaaatcagctgcta 24137426  T
Q  107 gcataacgaatgaagagcagc 127  Q
    ||| ||| |||||||||||||    
T  24137425 gcagaaccaatgaagagcagc 24137405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 8 - 137
Target Start/End: Complemental strand, 9512386 - 9512260
Alignment:
Q  8 taaataatataaacttctaacactacccctcaagctgaagcttactaagctttaagcttgttacaaattaaccccaaaaataaaccaaattagctcgtag 107  Q
    ||||||||||||| ||||||||| |||| ||||||||| ||||| | |   |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  9512386 taaataatataaagttctaacacaacccatcaagctgatgcttaatta---ttaagcttgttacaaattaaccccgaaaataaaccaaattagctcgtag 9512290  T
Q  108 cataacgaatgaagagcagccagaatcatc 137  Q
    |||||| ||||||||||||| |||| ||||    
T  9512289 cataaccaatgaagagcagcaagaaccatc 9512260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 22 - 87
Target Start/End: Original strand, 11320618 - 11320683
Alignment:
Q  22 ttctaacactacccctcaagctgaagcttactaagctttaagcttgttacaaattaaccccaaaaa 87  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  11320618 ttctaacactacccatcaagctgaagcttactaagctttaagcttgttacaaattaacccaaaaaa 11320683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 158 - 234
Target Start/End: Complemental strand, 9512263 - 9512187
Alignment:
Q  158 catccaagtagaagaaccatttcaaactaaaccaaacaaaaattggtagggagaagcaaccatatagaagaaccaat 234  Q
    |||||||||||||||  |||||| ||||||||||||||| ||| |||||| ||||||||||||| ||||||||||||    
T  9512263 catccaagtagaagagtcatttcgaactaaaccaaacaagaatcggtaggaagaagcaaccatacagaagaaccaat 9512187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 8 - 76
Target Start/End: Complemental strand, 27315180 - 27315112
Alignment:
Q  8 taaataatataaacttctaacactacccctcaagctgaagcttactaagctttaagcttgttacaaatt 76  Q
    |||||||||| || || ||||||||||||||||| | |||||||||||| |||||||||||||||||||    
T  27315180 taaataatatgaagttttaacactacccctcaaggtaaagcttactaagttttaagcttgttacaaatt 27315112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 22 - 75
Target Start/End: Original strand, 16404772 - 16404825
Alignment:
Q  22 ttctaacactacccctcaagctgaagcttactaagctttaagcttgttacaaat 75  Q
    |||||||||  | ||||||| | |||||||||||||||||||||||||| ||||    
T  16404772 ttctaacacatctcctcaagttaaagcttactaagctttaagcttgttagaaat 16404825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 25 - 73
Target Start/End: Complemental strand, 39440182 - 39440134
Alignment:
Q  25 taacactacccctcaagctgaagcttactaagctttaagcttgttacaa 73  Q
    ||||||| ||||||||||| ||||||||||||||| ||| || ||||||    
T  39440182 taacactccccctcaagctaaagcttactaagcttcaagtttattacaa 39440134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 76; Significance: 3e-35; HSPs: 16)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 123 - 234
Target Start/End: Complemental strand, 21814260 - 21814149
Alignment:
Q  123 gcagccagaatcatcaatcagccaaagagagaaatcatccaagtagaagaaccatttcaaactaaaccaaacaaaaattggtagggagaagcaaccatat 222  Q
    ||||| |||| ||||||  |||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||| ||||     
T  21814260 gcagcaagaaccatcaacaagccaaagagagaaatcatccaagcagaagaaccatttcaaactaaaccaaacaagaattggtagggagaagcaatcatac 21814161  T
Q  223 agaagaaccaat 234  Q
    | ||||||||||    
T  21814160 aaaagaaccaat 21814149  T

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Target: chr7; HSP #2
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 8 - 127
Target Start/End: Original strand, 46963247 - 46963367
Alignment:
Q  8 taaataatataaacttctaacactacccctcaagctgaagcttactaagctttaagcttgttacaaattaacc-ccaaaaataaaccaaattagctcgta 106  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||   ||||||||||||||| ||||   |    
T  46963247 taaataatataaagttctaacactacccctcaagctgaagcttactaagctttaaacttgttacaaattaaccaagaaaaataaaccaaatcagctgtca 46963346  T
Q  107 gcataacgaatgaagagcagc 127  Q
    ||| ||| |||| ||||||||    
T  46963347 gcaaaaccaatggagagcagc 46963367  T

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Target: chr7; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 8 - 127
Target Start/End: Original strand, 24486659 - 24486777
Alignment:
Q  8 taaataatataaacttctaacactacccctcaagctgaagcttactaagctttaagcttgttacaaattaaccccaaaaataaaccaaattagctcgtag 107  Q
    |||||||||||||||||||||||||||| | ||| | ||||||||||||||||||| |||||||||||| || ||||||||||||||||| |  |  |||    
T  24486659 taaataatataaacttctaacactacccttgaagttaaagcttactaagctttaagtttgttacaaatt-actccaaaaataaaccaaatgaagttatag 24486757  T
Q  108 cataacgaatgaagagcagc 127  Q
    |||||| |||||| ||||||    
T  24486758 cataaccaatgaatagcagc 24486777  T

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Target: chr7; HSP #4
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 8 - 97
Target Start/End: Original strand, 15614433 - 15614523
Alignment:
Q  8 taaataatataaacttctaacactacccctcaagctgaagcttactaagctttaagcttgttacaaattaaccc-caaaaataaaccaaat 97  Q
    ||||||||||||| |||| |||||||||||| ||||||||||||||||| ||||||||||||| ||||||||||  |||||||||||||||    
T  15614433 taaataatataaagttcttacactacccctcgagctgaagcttactaagttttaagcttgttaaaaattaacccagaaaaataaaccaaat 15614523  T

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Target: chr7; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 8 - 102
Target Start/End: Original strand, 17921382 - 17921476
Alignment:
Q  8 taaataatataaacttctaacactacccctcaagctgaagcttactaagctttaagcttgttacaaattaaccccaaaaataaaccaaattagct 102  Q
    |||||||| |||| ||  |||| ||||||||||||| |||||||||||||||||||||||||||||||||||||  |||||||| ||||||||||    
T  17921382 taaataatttaaaatttgaacagtacccctcaagctaaagcttactaagctttaagcttgttacaaattaacccagaaaataaaacaaattagct 17921476  T

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Target: chr7; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 8 - 127
Target Start/End: Complemental strand, 3902170 - 3902051
Alignment:
Q  8 taaataatataaacttctaacactacccctcaagctgaagcttactaagctttaagcttgttacaaattaaccccaaaaataaaccaaattagctcgtag 107  Q
    ||||||||||||| |||||||||| ||| | ||||| |||||| ||||||||||| |||||||||||||||||  |||||||||||| || ||||  ||     
T  3902170 taaataatataaagttctaacacttccctttaagctaaagcttgctaagctttaaacttgttacaaattaaccgaaaaaataaaccagatcagctgatat 3902071  T
Q  108 cataacgaatgaagagcagc 127  Q
    || ||| |||||||||||||    
T  3902070 caaaaccaatgaagagcagc 3902051  T

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Target: chr7; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 8 - 97
Target Start/End: Complemental strand, 3889678 - 3889589
Alignment:
Q  8 taaataatataaacttctaacactacccctcaagctgaagcttactaagctttaagcttgttacaaattaaccccaaaaataaaccaaat 97  Q
    ||||||||||||| |||||||||| ||| | ||||| ||| || ||||||||||| ||| |||||||||||||| |||||||||||||||    
T  3889678 taaataatataaagttctaacacttccctttaagctaaagtttgctaagctttaaacttattacaaattaacccaaaaaataaaccaaat 3889589  T

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Target: chr7; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 12 - 127
Target Start/End: Complemental strand, 44338974 - 44338858
Alignment:
Q  12 taatataaacttctaacactacccctcaagctgaagcttactaagctttaagcttgttacaaattaa-ccccaaaaataaaccaaattagctcgtagcat 110  Q
    ||||||||| ||| ||||| |||||||||| ||| |||||||||||||||||| | ||||||||||| |   ||||||||||||||| ||||  |||||     
T  44338974 taatataaagttcaaacaccacccctcaagttgaggcttactaagctttaagcctattacaaattaatctagaaaaataaaccaaatcagctgttagcag 44338875  T
Q  111 aacgaatgaagagcagc 127  Q
    ||| |||||||||||||    
T  44338874 aaccaatgaagagcagc 44338858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 8 - 97
Target Start/End: Complemental strand, 3890128 - 3890039
Alignment:
Q  8 taaataatataaacttctaaca-ctacccctcaagctgaagcttactaagctttaagcttgttacaaattaaccccaaaaataaaccaaat 97  Q
    ||||||||||||| |||||||| |||| | | ||||| |||||||||||||||||| ||||||||||||||| || |||||||||||||||    
T  3890128 taaataatataaagttctaacaactacactttaagctaaagcttactaagctttaaacttgttacaaattaa-ccaaaaaataaaccaaat 3890039  T

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Target: chr7; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 8 - 64
Target Start/End: Complemental strand, 26403430 - 26403374
Alignment:
Q  8 taaataatataaacttctaacactacccctcaagctgaagcttactaagctttaagc 64  Q
    ||||||||||||| |||||||||||||||||||||| ||| ||||||||||||||||    
T  26403430 taaataatataaagttctaacactacccctcaagctaaagtttactaagctttaagc 26403374  T

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Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 80
Target Start/End: Original strand, 11828103 - 11828174
Alignment:
Q  11 ataatataaacttctaacac--tacccctcaagctgaagcttactaagctttaagcttgttacaaattaacc 80  Q
    ||||||| || |||||||||  ||||||||||| ||||| ||||||||| ||||||||||||||||||||||    
T  11828103 ataatatgaagttctaacacattacccctcaagttgaagattactaagccttaagcttgttacaaattaacc 11828174  T

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Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 100
Target Start/End: Complemental strand, 21814355 - 21814264
Alignment:
Q  8 taaataatataaacttctaacactacccctcaagctgaagcttactaagctttaagcttgttacaaattaaccccaaaaataaaccaaattag 100  Q
    ||||||||||||| |||||||||||||||||||| |||  ||||| |||||||| | |||||||| ||| | ||| |||||| ||||||||||    
T  21814355 taaataatataaagttctaacactacccctcaagttgagtcttaccaagctttatgtttgttacatatt-atcccgaaaatataccaaattag 21814264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 120 - 195
Target Start/End: Original strand, 11828249 - 11828324
Alignment:
Q  120 agagcagccagaatcatcaatcagccaaagagagaaatcatccaagtagaagaaccatttcaaactaaaccaaaca 195  Q
    |||| ||| |||| ||||||||| ||||||||||||| |||||||||||||||||||  |||||| || |||||||    
T  11828249 agagtagcaagaaccatcaatcaaccaaagagagaaaccatccaagtagaagaaccaagtcaaaccaatccaaaca 11828324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 145 - 234
Target Start/End: Complemental strand, 10236835 - 10236744
Alignment:
Q  145 caaagagagaaatcatccaagtagaagaaccatttcaaactaaaccaaacaaaa--attggtagggagaagcaaccatatagaagaaccaat 234  Q
    |||||||| |||||||||||  | ||||||||  |||||| || ||||||||||  |  | |||||||||||||||||||||||||||||||    
T  10236835 caaagagaaaaatcatccaaacaaaagaaccaagtcaaacaaatccaaacaaaagaaccgctagggagaagcaaccatatagaagaaccaat 10236744  T

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Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 196
Target Start/End: Original strand, 24486813 - 24486880
Alignment:
Q  129 agaatcatcaatcagccaaagagagaaatcatccaagtagaagaaccatttcaaactaaaccaaacaa 196  Q
    ||||| ||||| ||| |||||||||||| |||||||  ||||||||||||| || |||||||||||||    
T  24486813 agaattatcaaccaggcaaagagagaaaccatccaataagaagaaccatttaaagctaaaccaaacaa 24486880  T

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Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 75
Target Start/End: Original strand, 37840468 - 37840510
Alignment:
Q  33 cccctcaagctgaagcttactaagctttaagcttgttacaaat 75  Q
    ||||||||||| |||||||||||||| ||| ||||||||||||    
T  37840468 cccctcaagctaaagcttactaagctataaccttgttacaaat 37840510  T

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Target: chr3 (Bit Score: 76; Significance: 3e-35; HSPs: 9)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 123 - 234
Target Start/End: Complemental strand, 16462800 - 16462689
Alignment:
Q  123 gcagccagaatcatcaatcagccaaagagagaaatcatccaagtagaagaaccatttcaaactaaaccaaacaaaaattggtagggagaagcaaccatat 222  Q
    ||||| |||| ||||||  |||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||| ||||     
T  16462800 gcagcaagaaccatcaacaagccaaagagagaaatcatccaagcagaagaaccatttcaaactaaaccaaacaagaattggtagggagaagcaatcatac 16462701  T
Q  223 agaagaaccaat 234  Q
    | ||||||||||    
T  16462700 aaaagaaccaat 16462689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 8 - 103
Target Start/End: Original strand, 22821042 - 22821137
Alignment:
Q  8 taaataatataaacttctaacactacccctcaagctgaagcttactaagctttaagcttgttacaaattaaccccaaaaataaaccaaattagctc 103  Q
    ||||||||||||| |||||||||||||||| ||||| |||| ||||||||||||| |||||||||||||||||| ||||||||||||||| |||||    
T  22821042 taaataatataaagttctaacactacccctaaagctaaagcctactaagctttaaacttgttacaaattaacccaaaaaataaaccaaatcagctc 22821137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 15 - 100
Target Start/End: Complemental strand, 50296205 - 50296119
Alignment:
Q  15 tataaacttctaacactacccctcaagctgaagcttactaagctttaagcttgttacaaattaaccc-caaaaataaaccaaattag 100  Q
    |||||| |||||||| |||||||||||| |||||||||||||||||| |||||||||||||||||||  ||||||||||||||||||    
T  50296205 tataaagttctaacattacccctcaagccgaagcttactaagctttaggcttgttacaaattaacccataaaaataaaccaaattag 50296119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 12 - 79
Target Start/End: Complemental strand, 34338149 - 34338082
Alignment:
Q  12 taatataaacttctaacactacccctcaagctgaagcttactaagctttaagcttgttacaaattaac 79  Q
    |||||||||||| |||  |||||||||||||| |||||||||||||||||| ||||||||||||||||    
T  34338149 taatataaacttttaaagctacccctcaagctaaagcttactaagctttaaacttgttacaaattaac 34338082  T

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Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 97
Target Start/End: Complemental strand, 42531218 - 42531128
Alignment:
Q  8 taaataatataaacttctaacactacccctcaagctgaagcttactaagctttaagcttgttacaaattaa-ccccaaaaataaaccaaat 97  Q
    |||||| |||||| ||||||||||| ||||||| ||||||||||||||||||||| || |||| | ||||| ||  |||||||||||||||    
T  42531218 taaatagtataaagttctaacactaaccctcaaactgaagcttactaagctttaaactagttatagattaatccagaaaaataaaccaaat 42531128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 100
Target Start/End: Complemental strand, 16462895 - 16462804
Alignment:
Q  8 taaataatataaacttctaacactacccctcaagctgaagcttactaagctttaagcttgttacaaattaaccccaaaaataaaccaaattag 100  Q
    ||||||||||||| |||||||||||||||||||| |||  ||||| |||||||| | |||||||| ||| | ||| |||||| ||||||||||    
T  16462895 taaataatataaagttctaacactacccctcaagttgagtcttaccaagctttatgtttgttacatatt-atcccgaaaatataccaaattag 16462804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 75
Target Start/End: Complemental strand, 46573990 - 46573941
Alignment:
Q  26 aacactacccctcaagctgaagcttactaagctttaagcttgttacaaat 75  Q
    |||||| ||||||||||| ||||||| ||||||||| |||||||||||||    
T  46573990 aacactccccctcaagcttaagcttaataagctttatgcttgttacaaat 46573941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 80
Target Start/End: Original strand, 2593274 - 2593343
Alignment:
Q  10 aataatataaacttctaacactacccctcaagctgaagcttactaagctttaagcttgttacaaattaacc 80  Q
    ||||||||||| |||||||| ||||| |||||   |||||||||||||||  ||||||||| |||||||||    
T  2593274 aataatataaagttctaacaataccc-tcaagtaaaagcttactaagcttctagcttgttaaaaattaacc 2593343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 91
Target Start/End: Complemental strand, 29555989 - 29555910
Alignment:
Q  11 ataatataaacttctaacactacccctcaagctgaagcttactaagctttaagcttgttacaaattaaccccaaaaataaa 91  Q
    ||||||||||||||||||| ||||  ||||||  |||||||  | ||||||||||| ||||||||| |||| | |||||||    
T  29555989 ataatataaacttctaacattacct-tcaagccaaagcttatgaggctttaagcttattacaaattcaccctataaataaa 29555910  T

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Target: chr2 (Bit Score: 72; Significance: 8e-33; HSPs: 7)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 8 - 102
Target Start/End: Complemental strand, 8986855 - 8986760
Alignment:
Q  8 taaataatataaacttctaacactacccctcaagctgaagcttactaagctttaagcttgttacaaattaacc-ccaaaaataaaccaaattagct 102  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||| ||||    
T  8986855 taaataatataaagttctaacactacccctcaagctgaagcttactaagctttaagcttgttacaaattaaccaagaaaaataaaccaaatcagct 8986760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 12 - 127
Target Start/End: Original strand, 38583677 - 38583793
Alignment:
Q  12 taatataaacttctaacactacccctcaagctgaagcttactaagctttaagcttgttacaaattaaccc--caaaaataaaccaaattagctcgtagca 109  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||   ||||||||||||||| |||| |||| |    
T  38583677 taatataaagttctaacactacccctcaagctgaagcttactaagctttaa-cttgttacaaattaatccaaaaaaaataaaccaaatcagctggtagaa 38583775  T
Q  110 taacgaatgaagagcagc 127  Q
     ||| ||| |||||||||    
T  38583776 gaaccaattaagagcagc 38583793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 8 - 80
Target Start/End: Complemental strand, 32291082 - 32291010
Alignment:
Q  8 taaataatataaacttctaacactacccctcaagctgaagcttactaagctttaagcttgttacaaattaacc 80  Q
    |||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  32291082 taaataatataaagatctaacactacccctcaagctgaagcttactaagctttaagcttgttaccaattaacc 32291010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 14 - 127
Target Start/End: Original strand, 1172950 - 1173064
Alignment:
Q  14 atataaacttctaacactacccctcaagctgaagcttactaagctttaagcttgttacaaattaaccc-caaaaataaaccaaattagctcgtagcataa 112  Q
    ||||||| |||||| |||||| |||||||||||||||||  ||||||||| |||||||||||||||||  |||||| |||||||| ||||  ||||| ||    
T  1172950 atataaagttctaatactacctctcaagctgaagcttacggagctttaagtttgttacaaattaacccagaaaaatcaaccaaatcagctgttagcaaaa 1173049  T
Q  113 cgaatgaagagcagc 127  Q
    | |||| ||||||||    
T  1173050 ccaatggagagcagc 1173064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 8 - 122
Target Start/End: Original strand, 42633119 - 42633233
Alignment:
Q  8 taaataatataaacttctaacactacccctcaagctgaagcttactaagctttaagcttgttacaaattaaccccaaaaataaaccaaattagctcgtag 107  Q
    |||||||||||||||| ||||||||| ||||||| | ||||||||||| |||| || || ||| ||||||||||  ||||||||| |||| ||||  |||    
T  42633119 taaataatataaacttttaacactacacctcaagttaaagcttactaaacttttagtttattataaattaaccctgaaaataaactaaatcagctaatag 42633218  T
Q  108 cataacgaatgaaga 122  Q
    ||| || ||||||||    
T  42633219 catgactaatgaaga 42633233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 12 - 102
Target Start/End: Original strand, 20593595 - 20593683
Alignment:
Q  12 taatataaacttctaacactacccctcaagctgaagcttactaagctttaagcttgttacaaattaaccccaaaaataaaccaaattagct 102  Q
    |||||| || |||||| ||||||||| ||| ||||| |||||||| ||||||||||||||||||||| || ||||||||||||||| ||||    
T  20593595 taatatgaagttctaa-actacccctaaagttgaagtttactaag-tttaagcttgttacaaattaatccaaaaaataaaccaaatcagct 20593683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 144 - 234
Target Start/End: Complemental strand, 2484744 - 2484652
Alignment:
Q  144 ccaaagagagaaatcatccaagtagaagaaccatttcaaactaaaccaaacaaa--aattggtagggagaagcaaccatatagaagaaccaat 234  Q
    ||||||||||||| ||||||| || ||||||||  |||||| ||||||||||||  ||  || |  ||||||||||| |||||||||||||||    
T  2484744 ccaaagagagaaaccatccaaataaaagaaccaagtcaaaccaaaccaaacaaaataaccggcattgagaagcaaccttatagaagaaccaat 2484652  T

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Target: chr8 (Bit Score: 68; Significance: 2e-30; HSPs: 6)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 8 - 103
Target Start/End: Complemental strand, 5616857 - 5616762
Alignment:
Q  8 taaataatataaacttctaacactacccctcaagctgaagcttactaagctttaagcttgttacaaattaaccccaaaaataaaccaaattagctc 103  Q
    ||||||||||||| |||||||||||||||| ||||| |||| ||||||||||||| |||||||||||||||||| ||||||||||||||| |||||    
T  5616857 taaataatataaagttctaacactacccctaaagctaaagcctactaagctttaaacttgttacaaattaacccaaaaaataaaccaaatcagctc 5616762  T

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Target: chr8; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 12 - 127
Target Start/End: Complemental strand, 20242651 - 20242535
Alignment:
Q  12 taatataaacttctaacactacccctcaagctgaagcttactaagctttaagcttgttacaaattaa-ccccaaaaataaaccaaattagctcgtagcat 110  Q
    ||||||||| ||| ||||| |||||||||| ||| |||||||||||||||||| | ||||||||||| |   ||||||||||||||| ||||  |||||     
T  20242651 taatataaagttcaaacaccacccctcaagttgaggcttactaagctttaagcctattacaaattaatctagaaaaataaaccaaatcagctgttagcag 20242552  T
Q  111 aacgaatgaagagcagc 127  Q
    ||| |||||||||||||    
T  20242551 aaccaatgaagagcagc 20242535  T

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Target: chr8; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 12 - 127
Target Start/End: Original strand, 20250509 - 20250625
Alignment:
Q  12 taatataaacttctaacactacccctcaagctgaagcttactaagctttaagcttgttacaaattaa-ccccaaaaataaaccaaattagctcgtagcat 110  Q
    ||||||||| ||| ||||| |||||||||| ||| |||||||||||||||||| | ||||||||||| |   ||||||||||||||| ||||  |||||     
T  20250509 taatataaagttcaaacaccacccctcaagttgaggcttactaagctttaagcctattacaaattaatctagaaaaataaaccaaatcagctgttagcag 20250608  T
Q  111 aacgaatgaagagcagc 127  Q
    ||| |||||||||||||    
T  20250609 aaccaatgaagagcagc 20250625  T

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Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 97
Target Start/End: Original strand, 16578965 - 16579054
Alignment:
Q  8 taaataatataaacttctaacacta--cccctcaagctgaagcttactaagctttaagcttgttacaaattaaccccaaaaataaaccaaat 97  Q
    ||||||||||||| ||| |||||||  ||||||||| | ||||||| |||||||||| ||||||||||||||| || |||||||||||||||    
T  16578965 taaataatataaa-ttccaacactatacccctcaagttaaagcttaataagctttaaacttgttacaaattaa-cctaaaaataaaccaaat 16579054  T

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Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 31 - 97
Target Start/End: Original strand, 16583729 - 16583794
Alignment:
Q  31 tacccctcaagctgaagcttactaagctttaagcttgttacaaattaaccccaaaaataaaccaaat 97  Q
    ||||||||||||| ||||||||||||||||||  ||| |||||||||| ||  ||||||||||||||    
T  16583729 tacccctcaagctaaagcttactaagctttaaatttgatacaaattaa-ccttaaaataaaccaaat 16583794  T

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Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 27 - 60
Target Start/End: Original strand, 30176366 - 30176399
Alignment:
Q  27 acactacccctcaagctgaagcttactaagcttt 60  Q
    ||||| ||||||||||||||||||||||||||||    
T  30176366 acactccccctcaagctgaagcttactaagcttt 30176399  T

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Target: chr1 (Bit Score: 62; Significance: 7e-27; HSPs: 8)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 8 - 125
Target Start/End: Complemental strand, 11993556 - 11993440
Alignment:
Q  8 taaataatataaacttctaacactacccctcaagctgaagcttactaagctttaagcttgttacaaattaaccccaaaaataaaccaaattagctcgtag 107  Q
    |||||||||||||||||||||||||||||||||| | ||||||| |||| ||||||||||||| ||||||||    |||||||||||||| ||||  |||    
T  11993556 taaataatataaacttctaacactacccctcaagttaaagcttattaagatttaagcttgtta-aaattaacaaagaaaataaaccaaatcagctgatag 11993458  T
Q  108 cataacgaatgaagagca 125  Q
    |||||| |||||||||||    
T  11993457 cataaccaatgaagagca 11993440  T

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Target: chr1; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 8 - 125
Target Start/End: Original strand, 2071713 - 2071832
Alignment:
Q  8 taaataatataaacttctaacactacccctcaagctgaagcttactaagc-tttaagcttgttacaaatt-aaccccaaaaataaaccaaattagctcgt 105  Q
    |||||||||||||||| ||||||||||||||||||| ||||||||||||| ||||||||||||||||||| ||||  |||||||||| |||| || |  |    
T  2071713 taaataatataaacttgtaacactacccctcaagctaaagcttactaagcgtttaagcttgttacaaattaaaccataaaaataaactaaatcagttgat 2071812  T
Q  106 agcataacgaatgaagagca 125  Q
    |||||||| |||| ||||||    
T  2071813 agcataacaaatggagagca 2071832  T

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Target: chr1; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 8 - 92
Target Start/End: Complemental strand, 10354288 - 10354204
Alignment:
Q  8 taaataatataaacttctaacactacccctcaagctgaagcttactaagctttaagcttgttacaaattaaccccaaaaataaac 92  Q
    ||||||||||||| |||||||||||| | ||||||| ||||||||||||||||||| |||||| |||||||||| ||||||||||    
T  10354288 taaataatataaagttctaacactactcttcaagctaaagcttactaagctttaagtttgttagaaattaacccaaaaaataaac 10354204  T

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Target: chr1; HSP #4
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 23 - 79
Target Start/End: Original strand, 15629549 - 15629605
Alignment:
Q  23 tctaacactacccctcaagctgaagcttactaagctttaagcttgttacaaattaac 79  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15629549 tctaacactacccctcaagctgaagcttactaagctttaagcttgttacaaattaac 15629605  T

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Target: chr1; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 8 - 78
Target Start/End: Original strand, 2075243 - 2075314
Alignment:
Q  8 taaataatataaacttctaacactacccctcaagctgaagcttactaagc-tttaagcttgttacaaattaa 78  Q
    |||||||||||||||| ||||||||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  2075243 taaataatataaacttgtaacactacccctcaagctaaagcttactaagcgtttaagcttgttacaaattaa 2075314  T

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Target: chr1; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 8 - 94
Target Start/End: Original strand, 3774499 - 3774586
Alignment:
Q  8 taaataatataaacttctaacactacccctcaagctgaagcttactaagctttaagcttgttacaaattaaccc-caaaaataaacca 94  Q
    |||| ||||||||||||||||| ||||||||||| | ||||||||||||||||| |||||||||||||||||||  ||||||||||||    
T  3774499 taaaaaatataaacttctaacattacccctcaagttaaagcttactaagctttatgcttgttacaaattaacccagaaaaataaacca 3774586  T

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Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 53 - 122
Target Start/End: Complemental strand, 370634 - 370565
Alignment:
Q  53 taagctttaagcttgttacaaattaaccccaaaaataaaccaaattagctcgtagcataacgaatgaaga 122  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||| |||   ||||||||| ||||||||    
T  370634 taagctttaagcttgttgcaaattaacccgaaaaataaaccaaatcagcctatagcataaccaatgaaga 370565  T

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Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 27 - 73
Target Start/End: Complemental strand, 29958959 - 29958913
Alignment:
Q  27 acactacccctcaagctgaagcttactaagctttaagcttgttacaa 73  Q
    ||||| ||||||||||| |||||||||||||||||||| ||||||||    
T  29958959 acacttcccctcaagctaaagcttactaagctttaagcctgttacaa 29958913  T

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Target: scaffold0499 (Bit Score: 59; Significance: 5e-25; HSPs: 1)
Name: scaffold0499
Description:

Target: scaffold0499; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 15 - 125
Target Start/End: Original strand, 7045 - 7155
Alignment:
Q  15 tataaacttctaacactacccctcaagctgaagcttactaagctttaagcttgttacaaattaaccccaaaaataaaccaaattagctcgtagcataacg 114  Q
    ||||||||||||||||||||||| ||||| |||||||||||| |||||||| ||||||||||||||   |||||||||||||| ||||| | ||||||      
T  7045 tataaacttctaacactaccccttaagctaaagcttactaaggtttaagctcgttacaaattaaccttgaaaataaaccaaatcagctcatggcataatc 7144  T
Q  115 aatgaagagca 125  Q
    |||| ||||||    
T  7145 aatggagagca 7155  T

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Target: scaffold0007 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 12 - 76
Target Start/End: Original strand, 14440 - 14504
Alignment:
Q  12 taatataaacttctaacactacccctcaagctgaagcttactaagctttaagcttgttacaaatt 76  Q
    ||||||||| ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  14440 taatataaaattctaacaccacctctcaagctgaagcttactaagctttaagcttgttacaaatt 14504  T

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Target: scaffold0025 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 49 - 103
Target Start/End: Original strand, 154713 - 154767
Alignment:
Q  49 ttactaagctttaagcttgttacaaattaaccccaaaaataaaccaaattagctc 103  Q
    |||||||| |||||| ||||||||||||||||| |||||||||||||||||||||    
T  154713 ttactaagttttaagtttgttacaaattaaccctaaaaataaaccaaattagctc 154767  T

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Target: scaffold0018 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 22 - 80
Target Start/End: Complemental strand, 32014 - 31956
Alignment:
Q  22 ttctaacactacccctcaagctgaagcttactaagctttaagcttgttacaaattaacc 80  Q
    |||||||||| ||||||| ||| ||||||||||||||||||||||||||||||| ||||    
T  32014 ttctaacactccccctcaggctaaagcttactaagctttaagcttgttacaaataaacc 31956  T

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Target: scaffold0048 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 74
Target Start/End: Original strand, 62017 - 62081
Alignment:
Q  10 aataatataaacttctaacactacccctcaagctgaagcttactaagctttaagcttgttacaaa 74  Q
    |||||||||||||   ||| |||||| ||||||| |||||||| ||| |||||| ||||||||||    
T  62017 aataatataaactcagaaccctacccgtcaagctaaagcttaccaagttttaagtttgttacaaa 62081  T

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