View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1614_low_99 (Length: 250)
Name: NF1614_low_99
Description: NF1614
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1614_low_99 |
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Alignment Details
Target: chr3 (Bit Score: 187; Significance: 1e-101; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 17 - 238
Target Start/End: Complemental strand, 39517750 - 39517522
Alignment:
| Q |
17 |
tttataaggatcttaccagcttggttattagttaaccaacatttaatacttaataatgacgataaat-------taggggttggatcgctaaattgattt |
109 |
Q |
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| T |
39517750 |
tttataaggatcttaccagcttggttattagttaaccaacatttaatacttaataatgacgatacataaattcataggggttgggtcgctaaattgattt |
39517651 |
T |
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| Q |
110 |
aagttaaaggtaagacgttgaagccttaaaggtcatggttcaaatatgcatgaatcaggctagcaaaagaaaatgaaggccatcatagtcactagacaaa |
209 |
Q |
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| T |
39517650 |
aagttaaaggtaagacgttgaagccttaaaggtcatggttcaaacatgcacgaatcaggctagcaaaagaaaatgaaggccatcatagtcactagacaaa |
39517551 |
T |
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| Q |
210 |
agaaaattaatctatcatagtcacagtat |
238 |
Q |
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| T |
39517550 |
agaaaattaatctatcatagtcacagtat |
39517522 |
T |
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